Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:02 (1461529): wrapper (7.7.26015): starting
00:05:02 (1461529): wrapper: running run_atlas (--nthreads 9)
[2025-12-13 00:05:02] Arguments: --nthreads 9
[2025-12-13 00:05:02] Threads: 9
[2025-12-13 00:05:02] Checking for CVMFS
[2025-12-13 00:05:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 00:05:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 00:05:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 00:05:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 00:05:05] 2.13.2.0 6538 58436 270716 153948 2 264 34517320 40960001 13445 16776704 0 73668321 99.768 47527647 36717 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-13 00:05:05] CVMFS is ok
[2025-12-13 00:05:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 00:05:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 00:05:05] Further information can be found at the LHC@home message board.
[2025-12-13 00:05:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 00:05:05] Checking for apptainer binary...
[2025-12-13 00:05:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 00:05:05] Running /usr/bin/apptainer --version
[2025-12-13 00:05:05] apptainer version 1.4.4-1.el9
[2025-12-13 00:05:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 00:05:06] c-210-31-3.aglt2.org
[2025-12-13 00:05:06] apptainer works
[2025-12-13 00:05:06] Set ATHENA_PROC_NUMBER=9
[2025-12-13 00:05:06] Set ATHENA_CORE_NUMBER=9
[2025-12-13 00:05:07] Starting ATLAS job with PandaID=6928959029
[2025-12-13 00:05:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 14:51:26]  *** The last 200 lines of the pilot log: ***
[2025-12-13 14:51:26] 2025-12-13 19:17:14,532 | INFO     | time since job start (51038s) is within the limit (174528.0s)
[2025-12-13 14:51:26] 2025-12-13 19:17:14,535 | INFO     | fitting pss+swap vs Time
[2025-12-13 14:51:26] 2025-12-13 19:17:14,538 | INFO     | sum of square deviations: 179232631120.1184
[2025-12-13 14:51:26] 2025-12-13 19:17:14,626 | INFO     | sum of deviations: 310978936455.3528
[2025-12-13 14:51:26] 2025-12-13 19:17:14,626 | INFO     | mean x: 1765627960.0588236
[2025-12-13 14:51:26] 2025-12-13 19:17:14,626 | INFO     | mean y: 2497570.400960384
[2025-12-13 14:51:26] 2025-12-13 19:17:14,627 | INFO     | intersect: -3060968617.4437537
[2025-12-13 14:51:26] 2025-12-13 19:17:14,646 | INFO     | chi2: 6.8173625428834175
[2025-12-13 14:51:26] 2025-12-13 19:17:14,647 | INFO     | sum of square deviations: 176025038208.79584
[2025-12-13 14:51:26] 2025-12-13 19:17:14,675 | INFO     | sum of deviations: 468451637906.7419
[2025-12-13 14:51:26] 2025-12-13 19:17:14,675 | INFO     | mean x: 1765627807.571256
[2025-12-13 14:51:26] 2025-12-13 19:17:14,675 | INFO     | mean y: 2505038.190821256
[2025-12-13 14:51:26] 2025-12-13 19:17:14,676 | INFO     | intersect: -4696322167.342001
[2025-12-13 14:51:26] 2025-12-13 19:17:14,676 | INFO     | chi2: 4.727144484286073
[2025-12-13 14:51:26] 2025-12-13 19:17:14,676 | INFO     | current chi2=4.727144484286073 (change=30.66021566917113 %)
[2025-12-13 14:51:26] 2025-12-13 19:17:14,681 | INFO     | sum of square deviations: 172855957647.2152
[2025-12-13 14:51:26] 2025-12-13 19:17:14,707 | INFO     | sum of deviations: 463798969126.3994
[2025-12-13 14:51:26] 2025-12-13 19:17:14,707 | INFO     | mean x: 1765627655.0838397
[2025-12-13 14:51:26] 2025-12-13 19:17:14,707 | INFO     | mean y: 2504814.240583232
[2025-12-13 14:51:26] 2025-12-13 19:17:14,707 | INFO     | intersect: -4734944200.737811
[2025-12-13 14:51:26] 2025-12-13 19:17:14,711 | INFO     | chi2: 4.7276822109012615
[2025-12-13 14:51:26] 2025-12-13 19:17:14,711 | INFO     | current chi2=4.7276822109012615 (change=-0.01137529468321566 %)
[2025-12-13 14:51:26] 2025-12-13 19:17:14,711 | INFO     | right removable region: 822
[2025-12-13 14:51:26] 2025-12-13 19:17:14,712 | INFO     | sum of square deviations: 176023992058.79572
[2025-12-13 14:51:26] 2025-12-13 19:17:14,769 | INFO     | sum of deviations: 49526692665.431206
[2025-12-13 14:51:26] 2025-12-13 19:17:14,770 | INFO     | mean x: 1765628112.571256
[2025-12-13 14:51:26] 2025-12-13 19:17:14,770 | INFO     | mean y: 2509992.018115942
[2025-12-13 14:51:26] 2025-12-13 19:17:14,770 | INFO     | intersect: -494272974.1559114
[2025-12-13 14:51:26] 2025-12-13 19:17:14,776 | INFO     | chi2: 3.3006839523880425
[2025-12-13 14:51:26] 2025-12-13 19:17:14,777 | INFO     | current chi2=3.3006839523880425 (change=51.58415103163912 %)
[2025-12-13 14:51:26] 2025-12-13 19:17:14,778 | INFO     | sum of square deviations: 172853966247.5449
[2025-12-13 14:51:26] 2025-12-13 19:17:14,803 | INFO     | sum of deviations: -89051795988.83472
[2025-12-13 14:51:26] 2025-12-13 19:17:14,808 | INFO     | mean x: 1765628265.0814095
[2025-12-13 14:51:26] 2025-12-13 19:17:14,808 | INFO     | mean y: 2516651.788578372
[2025-12-13 14:51:26] 2025-12-13 19:17:14,808 | INFO     | intersect: 912142108.8577944
[2025-12-13 14:51:26] 2025-12-13 19:17:14,809 | INFO     | chi2: 2.245990316112856
[2025-12-13 14:51:26] 2025-12-13 19:17:14,809 | INFO     | current chi2=2.245990316112856 (change=31.953790532174903 %)
[2025-12-13 14:51:26] 2025-12-13 19:17:14,810 | INFO     | sum of square deviations: 169722270917.806
[2025-12-13 14:51:26] 2025-12-13 19:17:14,839 | INFO     | sum of deviations: -130328564769.67973
[2025-12-13 14:51:26] 2025-12-13 19:17:14,840 | INFO     | mean x: 1765628417.5904646
[2025-12-13 14:51:26] 2025-12-13 19:17:14,840 | INFO     | mean y: 2518658.630806846
[2025-12-13 14:51:26] 2025-12-13 19:17:14,840 | INFO     | intersect: 1358332579.4365554
[2025-12-13 14:51:26] 2025-12-13 19:17:14,841 | INFO     | chi2: 2.13671705582034
[2025-12-13 14:51:26] 2025-12-13 19:17:14,841 | INFO     | current chi2=2.13671705582034 (change=4.86525963663261 %)
[2025-12-13 14:51:26] 2025-12-13 19:17:14,841 | INFO     | left removable region: 30
[2025-12-13 14:51:26] 2025-12-13 19:17:14,842 | INFO     | sum of square deviations: 154047486380.71594
[2025-12-13 14:51:26] 2025-12-13 19:17:14,866 | INFO     | sum of deviations: 21514248647.806812
[2025-12-13 14:51:26] 2025-12-13 19:17:14,867 | INFO     | mean x: 1765628539.6477273
[2025-12-13 14:51:26] 2025-12-13 19:17:14,867 | INFO     | mean y: 2526463.253787879
[2025-12-13 14:51:26] 2025-12-13 19:17:14,867 | INFO     | intersect: -244060951.53703493
[2025-12-13 14:51:26] 2025-12-13 19:17:14,872 | INFO     | chi2: 0.0059495423015119
[2025-12-13 14:51:26] 2025-12-13 19:17:14,872 | INFO     | current memory leak: 0.14 B/s (using 792 data points, chi2=0.01)
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | could have reported an average CPU frequency of 2714 MHz (31 samples)
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | ..............................
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | . Timing measurements:
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | . get job = 0 s
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | . initial setup = 9 s
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | . payload setup = 51 s
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | . stage-in = 0 s
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | . payload execution = 50847 s
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | . stage-out = 7 s
[2025-12-13 14:51:26] 2025-12-13 19:17:14,874 | INFO     | . log creation = 1 s
[2025-12-13 14:51:26] 2025-12-13 19:17:14,875 | INFO     | ..............................
[2025-12-13 14:51:26] 2025-12-13 19:17:15,058 | INFO     | 
[2025-12-13 14:51:26] 2025-12-13 19:17:15,058 | INFO     | job summary report
[2025-12-13 14:51:26] 2025-12-13 19:17:15,058 | INFO     | --------------------------------------------------
[2025-12-13 14:51:26] 2025-12-13 19:17:15,058 | INFO     | PanDA job id: 6928959029
[2025-12-13 14:51:26] 2025-12-13 19:17:15,058 | INFO     | task id: 47886831
[2025-12-13 14:51:26] 2025-12-13 19:17:15,058 | INFO     | errors: (none)
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | pilot state: finished 
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | transexitcode: 0
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | exeerrorcode: 0
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | exeerrordiag: 
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | exitcode: 0
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | exitmsg: OK
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | cpuconsumptiontime: 45228 s
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | nevents: 400
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | neventsw: 0
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | pid: 1502675
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | pgrp: 1502675
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | corecount: 9
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | event service: False
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | sizes: {0: 2283818, 1: 2284017, 12: 2284017, 23: 2284045, 34: 2284073, 42: 2284363, 45: 2284547, 50904: 2331921, 50913: 2340919, 50916: 2340975, 50948: 2341169}
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | --------------------------------------------------
[2025-12-13 14:51:26] 2025-12-13 19:17:15,059 | INFO     | 
[2025-12-13 14:51:26] 2025-12-13 19:17:15,060 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-12-13 14:51:26] 2025-12-13 19:17:15,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,107 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,107 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,107 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,107 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,108 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 14:51:26] 2025-12-13 19:17:15,109 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,109 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 14:51:26] 2025-12-13 19:17:15,109 | INFO     | job 6928959029 has completed (purged errors)
[2025-12-13 14:51:26] 2025-12-13 19:17:15,109 | INFO     | overall cleanup function is called
[2025-12-13 14:51:26] 2025-12-13 19:17:16,130 | INFO     | --- collectZombieJob: --- 10, [1502675]
[2025-12-13 14:51:26] 2025-12-13 19:17:16,131 | INFO     | zombie collector waiting for pid 1502675
[2025-12-13 14:51:26] 2025-12-13 19:17:16,131 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 14:51:26] 2025-12-13 19:17:16,131 | INFO     | collected zombie processes
[2025-12-13 14:51:26] 2025-12-13 19:17:16,131 | INFO     | will attempt to kill all subprocesses of pid=1502675
[2025-12-13 14:51:26] 2025-12-13 19:17:16,809 | INFO     | process IDs to be killed: [1502675] (in reverse order)
[2025-12-13 14:51:26] 2025-12-13 19:17:16,974 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 14:51:26] 2025-12-13 19:17:16,974 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 14:51:26] 2025-12-13 19:17:17,007 | INFO     | did not find any defunct processes belonging to 1502675
[2025-12-13 14:51:26] 2025-12-13 19:17:17,029 | INFO     | did not find any defunct processes belonging to 1502675
[2025-12-13 14:51:26] 2025-12-13 19:17:17,029 | INFO     | ready for new job
[2025-12-13 14:51:26] 2025-12-13 19:17:17,029 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 14:51:26] 2025-12-13 19:17:17,034 | INFO     | ***************************************
[2025-12-13 14:51:26] 2025-12-13 19:17:17,034 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 14:51:26] 2025-12-13 19:17:17,034 | INFO     | ***************************************
[2025-12-13 14:51:26] 2025-12-13 19:17:17,034 | INFO     | 
[2025-12-13 14:51:26] 2025-12-13 19:17:17,038 | INFO     | architecture information:
[2025-12-13 14:51:26] 2025-12-13 19:17:17,041 | INFO     | executing command: cat /etc/os-release
[2025-12-13 14:51:26] 2025-12-13 19:17:17,088 | INFO     | cat /etc/os-release:
[2025-12-13 14:51:26] NAME="CentOS Linux"
[2025-12-13 14:51:26] VERSION="7 (Core)"
[2025-12-13 14:51:26] ID="centos"
[2025-12-13 14:51:26] ID_LIKE="rhel fedora"
[2025-12-13 14:51:26] VERSION_ID="7"
[2025-12-13 14:51:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 14:51:26] ANSI_COLOR="0;31"
[2025-12-13 14:51:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 14:51:26] HOME_URL="https://www.centos.org/"
[2025-12-13 14:51:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 14:51:26] 
[2025-12-13 14:51:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 14:51:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 14:51:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 14:51:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 14:51:26] 
[2025-12-13 14:51:26] 2025-12-13 19:17:17,089 | INFO     | ***************************************
[2025-12-13 14:51:26] 2025-12-13 19:17:17,593 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-12-13 14:51:26] 2025-12-13 19:17:17,650 | INFO     | sufficient remaining disk space (72182923264 B)
[2025-12-13 14:51:26] 2025-12-13 19:17:17,651 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 14:51:26] 2025-12-13 19:17:17,651 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 14:51:26] 2025-12-13 19:17:17,651 | INFO     | update_server=False
[2025-12-13 14:51:26] 2025-12-13 19:17:17,651 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 14:51:26] 2025-12-13 19:17:17,927 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 14:51:26] 2025-12-13 19:17:17,928 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 14:51:26] 2025-12-13 19:17:17,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:51:26] 2025-12-13 19:17:17,928 | INFO     | will abort loop
[2025-12-13 14:51:26] 2025-12-13 19:17:18,012 | INFO     | all data control threads have been joined
[2025-12-13 14:51:26] 2025-12-13 19:17:18,088 | INFO     | all job control threads have been joined
[2025-12-13 14:51:26] 2025-12-13 19:17:18,318 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 14:51:26] 2025-12-13 19:17:18,657 | INFO     | [job] retrieve thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:18,914 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:18,934 | INFO     | [job] job monitor thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:18,935 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:18,939 | INFO     | [job] validate thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:18,951 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:18,962 | INFO     | all payload control threads have been joined
[2025-12-13 14:51:26] 2025-12-13 19:17:18,980 | INFO     | [payload] failed_post thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:19,024 | INFO     | [payload] validate_post thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:19,034 | INFO     | [data] control thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:19,084 | INFO     | [data] copytool_in thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:19,094 | INFO     | [job] control thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:19,278 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:19,968 | INFO     | [payload] control thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:20,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:51:26] 2025-12-13 19:17:20,325 | INFO     | [data] copytool_out thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:20,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 14:51:26] 2025-12-13 19:17:21,092 | INFO     | [job] queue monitor thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:24,870 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 14:51:26] 2025-12-13 19:17:47,989 | INFO     | PID=1476264 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 14:51:26] 2025-12-13 19:17:47,990 | INFO     | .. there are 12 such processes running
[2025-12-13 14:51:26] 2025-12-13 19:17:47,990 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 14:51:26] 2025-12-13 19:17:47,991 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 14:51:26] 2025-12-13 19:17:47,991 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 14:51:26] 2025-12-13 19:18:15,174 | INFO     | [monitor] cgroup control has ended
[2025-12-13 14:51:26] 2025-12-13 19:18:16,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140374470256448)>', '<ExcThread(monitor, started 140374110607104)>']
[2025-12-13 14:51:26] 2025-12-13 19:18:17,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 14:51:26] 2025-12-13 19:18:17,170 | INFO     | [monitor] control thread has ended
[2025-12-13 14:51:26] 2025-12-13 19:18:22,041 | INFO     | all workflow threads have been joined
[2025-12-13 14:51:26] 2025-12-13 19:18:22,042 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 14:51:26] 2025-12-13 19:18:22,042 | INFO     | traces error code: 0
[2025-12-13 14:51:26] 2025-12-13 19:18:22,042 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 14:51:26] 2025-12-13 19:18:24,030 [wrapper] ==== pilot stdout END ====
[2025-12-13 14:51:26] 2025-12-13 19:18:24,098 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 14:51:26] 2025-12-13 19:18:24,137 [wrapper] pilotpid: 1476264
[2025-12-13 14:51:26] 2025-12-13 19:18:24,191 [wrapper] Pilot exit status: 0
[2025-12-13 14:51:26] 2025-12-13 19:18:24,461 [wrapper] pandaids: 6928959029
[2025-12-13 14:51:26] 2025-12-13 19:18:24,765 [wrapper] cleanup supervisor_pilot 2886265 1476265
[2025-12-13 14:51:26] 2025-12-13 19:18:24,800 [wrapper] Test setup, not cleaning
[2025-12-13 14:51:26] 2025-12-13 19:18:24,824 [wrapper] apfmon messages muted
[2025-12-13 14:51:26] 2025-12-13 19:18:24,861 [wrapper] ==== wrapper stdout END ====
[2025-12-13 14:51:26] 2025-12-13 19:18:24,903 [wrapper] ==== wrapper stderr END ====
[2025-12-13 14:51:26]  *** Error codes and diagnostics ***
[2025-12-13 14:51:26]     "exeErrorCode": 0,
[2025-12-13 14:51:26]     "exeErrorDiag": "",
[2025-12-13 14:51:26]     "pilotErrorCode": 0,
[2025-12-13 14:51:26]     "pilotErrorDiag": "",
[2025-12-13 14:51:26]  *** Listing of results directory ***
[2025-12-13 14:51:26] total 345132
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas    579449 Dec 12 23:45 pilot3.tar.gz
[2025-12-13 14:51:26] -rwx------. 1 boincer umatlas     36322 Dec 12 23:50 runpilot2-wrapper.sh
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas      5112 Dec 12 23:50 queuedata.json
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas       100 Dec 13 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 14:51:26] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 13 00:05 run_atlas
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas       105 Dec 13 00:05 job.xml
[2025-12-13 14:51:26] -rw-r--r--. 2 boincer umatlas 194503196 Dec 13 00:05 EVNT.47886829._000109.pool.root.1
[2025-12-13 14:51:26] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 00:05 start_atlas.sh
[2025-12-13 14:51:26] drwxrwx--x. 2 boincer umatlas      4096 Dec 13 00:05 shared
[2025-12-13 14:51:26] -rw-r--r--. 2 boincer umatlas    592411 Dec 13 00:05 input.tar.gz
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas         0 Dec 13 00:05 boinc_lockfile
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas      2537 Dec 13 00:05 pandaJob.out
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas        57 Dec 13 00:05 setup.sh.local
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas    991736 Dec 13 00:06 agis_schedconf.cvmfs.json
[2025-12-13 14:51:26] drwx------. 5 boincer umatlas      4096 Dec 13 00:06 pilot3
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas 141064876 Dec 13 14:12 HITS.47886831._002722.pool.root.1
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas       529 Dec 13 14:13 boinc_task_state.xml
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas      1053 Dec 13 14:16 memory_monitor_summary.json
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas   1516240 Dec 13 14:16 agis_ddmendpoints.agis.ALL.json
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas    919127 Dec 13 14:16 log.47886831._002722.job.log.tgz.1
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas      7847 Dec 13 14:17 heartbeat.json
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas        95 Dec 13 14:17 pilot_heartbeat.json
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas      5010 Dec 13 14:18 pilotlog.txt
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas   6041376 Dec 13 14:18 log.47886831._002722.job.log.1
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas       357 Dec 13 14:18 output.list
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas       620 Dec 13 14:18 runtime_log
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas   6983680 Dec 13 14:18 result.tar.gz
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas      9353 Dec 13 14:18 runtime_log.err
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas       664 Dec 13 14:18 FW4MDmNlWo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmymNKDmMU21rm.diag
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas      6841 Dec 13 14:46 init_data.xml
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas        26 Dec 13 14:51 wrapper_checkpoint.txt
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 14:51 boinc_mmap_file
[2025-12-13 14:51:26] -rw-r--r--. 1 boincer umatlas     21086 Dec 13 14:51 stderr.txt
[2025-12-13 14:51:26] HITS file was successfully produced:
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas 141064876 Dec 13 14:12 shared/HITS.pool.root.1
[2025-12-13 14:51:26]  *** Contents of shared directory: ***
[2025-12-13 14:51:26] total 335132
[2025-12-13 14:51:26] -rw-r--r--. 2 boincer umatlas 194503196 Dec 13 00:05 ATLAS.root_0
[2025-12-13 14:51:26] -rw-r--r--. 2 boincer umatlas     15847 Dec 13 00:05 start_atlas.sh
[2025-12-13 14:51:26] -rw-r--r--. 2 boincer umatlas    592411 Dec 13 00:05 input.tar.gz
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas 141064876 Dec 13 14:12 HITS.pool.root.1
[2025-12-13 14:51:26] -rw-------. 1 boincer umatlas   6983680 Dec 13 14:18 result.tar.gz
14:51:28 (1461529): run_atlas exited; CPU time 46575.868626
14:51:28 (1461529): called boinc_finish(0)

</stderr_txt>
]]>

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