Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:40:36 (10054): wrapper (7.7.26015): starting
10:40:36 (10054): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 10:40:36] Arguments: --nthreads 8
[2025-12-13 10:40:36] Threads: 8
[2025-12-13 10:40:36] Checking for CVMFS
[2025-12-13 10:40:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 10:40:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 10:40:37] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 10:40:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 10:40:37] 2.11.2.0 4822 236019 138860 153955 1 207 21034000 25165824 3796 130560 9 108057542 99.882 51783762 2577 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-13 10:40:37] CVMFS is ok
[2025-12-13 10:40:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 10:40:37] Checking for apptainer binary...
[2025-12-13 10:40:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 10:40:37] Running /usr/bin/apptainer --version
[2025-12-13 10:40:37] apptainer version 1.3.2-1.el7
[2025-12-13 10:40:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 10:40:39] cg-vwn474.simple-grid.lan
[2025-12-13 10:40:39] apptainer works
[2025-12-13 10:40:39] Set ATHENA_PROC_NUMBER=8
[2025-12-13 10:40:39] Set ATHENA_CORE_NUMBER=8
[2025-12-13 10:40:39] Starting ATLAS job with PandaID=6928824001
[2025-12-13 10:40:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 14:49:32]  *** The last 200 lines of the pilot log: ***
[2025-12-13 14:49:32] 2025-12-13 13:48:53,220 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-13 14:49:32] 2025-12-13 13:48:53,222 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6928824001/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,223 | INFO     | extracted standard info from prmon json
[2025-12-13 14:49:32] 2025-12-13 13:48:53,223 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 14:49:32] 2025-12-13 13:48:53,223 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 14:49:32] 2025-12-13 13:48:53,223 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 14:49:32] 2025-12-13 13:48:53,223 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 14:49:32] 2025-12-13 13:48:53,228 | INFO     | fitting pss+swap vs Time
[2025-12-13 14:49:32] 2025-12-13 13:48:53,229 | INFO     | sum of square deviations: 3972995422.5
[2025-12-13 14:49:32] 2025-12-13 13:48:53,231 | INFO     | sum of deviations: 60589248265.00001
[2025-12-13 14:49:32] 2025-12-13 13:48:53,231 | INFO     | mean x: 1765626484.5
[2025-12-13 14:49:32] 2025-12-13 13:48:53,231 | INFO     | mean y: 2426663.863247863
[2025-12-13 14:49:32] 2025-12-13 13:48:53,231 | INFO     | intersect: -26923851883.24718
[2025-12-13 14:49:32] 2025-12-13 13:48:53,232 | INFO     | chi2: 5.296057127114367
[2025-12-13 14:49:32] 2025-12-13 13:48:53,232 | INFO     | sum of square deviations: 3723716330.0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,234 | INFO     | sum of deviations: 74473403791.99997
[2025-12-13 14:49:32] 2025-12-13 13:48:53,234 | INFO     | mean x: 1765626332.0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,234 | INFO     | mean y: 2434994.231441048
[2025-12-13 14:49:32] 2025-12-13 13:48:53,234 | INFO     | intersect: -35309654089.85403
[2025-12-13 14:49:32] 2025-12-13 13:48:53,235 | INFO     | chi2: 4.558750349570032
[2025-12-13 14:49:32] 2025-12-13 13:48:53,235 | INFO     | current chi2=4.558750349570032 (change=13.921805597026616 %)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,235 | INFO     | right removable region: 228
[2025-12-13 14:49:32] 2025-12-13 13:48:53,235 | INFO     | sum of square deviations: 3723716330.0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,237 | INFO     | sum of deviations: -12925570966.000002
[2025-12-13 14:49:32] 2025-12-13 13:48:53,237 | INFO     | mean x: 1765626637.0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,237 | INFO     | mean y: 2471558.2401746726
[2025-12-13 14:49:32] 2025-12-13 13:48:53,237 | INFO     | intersect: 6131223153.022214
[2025-12-13 14:49:32] 2025-12-13 13:48:53,238 | INFO     | chi2: 1.334895882886176
[2025-12-13 14:49:32] 2025-12-13 13:48:53,238 | INFO     | current chi2=1.334895882886176 (change=74.79453391747091 %)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,238 | INFO     | sum of square deviations: 3485088600.0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,240 | INFO     | sum of deviations: -30000254266.999992
[2025-12-13 14:49:32] 2025-12-13 13:48:53,240 | INFO     | mean x: 1765626789.5
[2025-12-13 14:49:32] 2025-12-13 13:48:53,240 | INFO     | mean y: 2482348.6160714286
[2025-12-13 14:49:32] 2025-12-13 13:48:53,240 | INFO     | intersect: 15201307602.478163
[2025-12-13 14:49:32] 2025-12-13 13:48:53,241 | INFO     | chi2: 0.917405914588348
[2025-12-13 14:49:32] 2025-12-13 13:48:53,241 | INFO     | current chi2=0.917405914588348 (change=31.275095956935147 %)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,241 | INFO     | sum of square deviations: 3256879670.0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,243 | INFO     | sum of deviations: -24535237854.0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,243 | INFO     | mean x: 1765626942.0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,243 | INFO     | mean y: 2478671.5114155253
[2025-12-13 14:49:32] 2025-12-13 13:48:53,243 | INFO     | intersect: 13303577076.35382
[2025-12-13 14:49:32] 2025-12-13 13:48:53,244 | INFO     | chi2: 0.8962166417515447
[2025-12-13 14:49:32] 2025-12-13 13:48:53,244 | INFO     | current chi2=0.8962166417515447 (change=2.309694378448735 %)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,244 | INFO     | left removable region: 30
[2025-12-13 14:49:32] 2025-12-13 13:48:53,244 | INFO     | sum of square deviations: 2406926989.5
[2025-12-13 14:49:32] 2025-12-13 13:48:53,246 | INFO     | sum of deviations: 5328206894.000001
[2025-12-13 14:49:32] 2025-12-13 13:48:53,246 | INFO     | mean x: 1765627216.5
[2025-12-13 14:49:32] 2025-12-13 13:48:53,246 | INFO     | mean y: 2477402.9393939395
[2025-12-13 14:49:32] 2025-12-13 13:48:53,246 | INFO     | intersect: -3906086150.599724
[2025-12-13 14:49:32] 2025-12-13 13:48:53,246 | INFO     | chi2: 0.0004915693978999785
[2025-12-13 14:49:32] 2025-12-13 13:48:53,247 | INFO     | current memory leak: 2.21 B/s (using 198 data points, chi2=0.00)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,247 | INFO     | could have reported an average CPU frequency of 2249 MHz (11 samples)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | ..............................
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | . Timing measurements:
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | . get job = 0 s
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | . initial setup = 8 s
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | . payload setup = 111 s
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | . stage-in = 0 s
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | . payload execution = 14420 s
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | . stage-out = 3 s
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | . log creation = 1 s
[2025-12-13 14:49:32] 2025-12-13 13:48:53,248 | INFO     | ..............................
[2025-12-13 14:49:32] 2025-12-13 13:48:53,338 | INFO     | time since job start (14820s) is within the limit (174528.0s)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,364 | INFO     | 
[2025-12-13 14:49:32] 2025-12-13 13:48:53,364 | INFO     | job summary report
[2025-12-13 14:49:32] 2025-12-13 13:48:53,364 | INFO     | --------------------------------------------------
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | PanDA job id: 6928824001
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | task id: 47886831
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | errors: (none)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | pilot state: finished 
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | transexitcode: 0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | exeerrorcode: 0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | exeerrordiag: 
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | exitcode: 0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | exitmsg: OK
[2025-12-13 14:49:32] 2025-12-13 13:48:53,365 | INFO     | cpuconsumptiontime: 51862 s
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | nevents: 400
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | neventsw: 0
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | pid: 21988
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | pgrp: 21988
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | corecount: 8
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | event service: False
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | sizes: {0: 2283158, 1: 2283843, 2: 2284042, 13: 2284042, 24: 2284098, 34: 2284126, 45: 2284282, 56: 2284310, 66: 2284338, 77: 2284366, 88: 2284422, 97: 2284992, 99
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | --------------------------------------------------
[2025-12-13 14:49:32] 2025-12-13 13:48:53,366 | INFO     | 
[2025-12-13 14:49:32] 2025-12-13 13:48:53,367 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-13 14:49:32] 2025-12-13 13:48:53,488 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,488 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,488 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,488 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,488 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,488 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,488 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,489 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,490 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,490 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,490 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,490 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 14:49:32] 2025-12-13 13:48:53,490 | INFO     | job 6928824001 has completed (purged errors)
[2025-12-13 14:49:32] 2025-12-13 13:48:53,490 | INFO     | overall cleanup function is called
[2025-12-13 14:49:32] 2025-12-13 13:48:54,499 | INFO     | --- collectZombieJob: --- 10, [21988]
[2025-12-13 14:49:32] 2025-12-13 13:48:54,499 | INFO     | zombie collector waiting for pid 21988
[2025-12-13 14:49:32] 2025-12-13 13:48:54,500 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 14:49:32] 2025-12-13 13:48:54,500 | INFO     | collected zombie processes
[2025-12-13 14:49:32] 2025-12-13 13:48:54,500 | INFO     | will attempt to kill all subprocesses of pid=21988
[2025-12-13 14:49:32] 2025-12-13 13:48:54,635 | INFO     | process IDs to be killed: [21988] (in reverse order)
[2025-12-13 14:49:32] 2025-12-13 13:48:54,691 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 14:49:32] 2025-12-13 13:48:54,691 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 14:49:32] 2025-12-13 13:48:54,695 | INFO     | did not find any defunct processes belonging to 21988
[2025-12-13 14:49:32] 2025-12-13 13:48:54,699 | INFO     | did not find any defunct processes belonging to 21988
[2025-12-13 14:49:32] 2025-12-13 13:48:54,699 | INFO     | ready for new job
[2025-12-13 14:49:32] 2025-12-13 13:48:54,699 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 14:49:32] 2025-12-13 13:48:54,701 | INFO     | ***************************************
[2025-12-13 14:49:32] 2025-12-13 13:48:54,701 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 14:49:32] 2025-12-13 13:48:54,701 | INFO     | ***************************************
[2025-12-13 14:49:32] 2025-12-13 13:48:54,702 | INFO     | 
[2025-12-13 14:49:32] 2025-12-13 13:48:54,702 | INFO     | pilot is running in a VM
[2025-12-13 14:49:32] 2025-12-13 13:48:54,702 | INFO     | architecture information:
[2025-12-13 14:49:32] 2025-12-13 13:48:54,703 | INFO     | executing command: cat /etc/os-release
[2025-12-13 14:49:32] 2025-12-13 13:48:54,769 | INFO     | cat /etc/os-release:
[2025-12-13 14:49:32] NAME="CentOS Linux"
[2025-12-13 14:49:32] VERSION="7 (Core)"
[2025-12-13 14:49:32] ID="centos"
[2025-12-13 14:49:32] ID_LIKE="rhel fedora"
[2025-12-13 14:49:32] VERSION_ID="7"
[2025-12-13 14:49:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 14:49:32] ANSI_COLOR="0;31"
[2025-12-13 14:49:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 14:49:32] HOME_URL="https://www.centos.org/"
[2025-12-13 14:49:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 14:49:32] 
[2025-12-13 14:49:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 14:49:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 14:49:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 14:49:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 14:49:32] 
[2025-12-13 14:49:32] 2025-12-13 13:48:54,769 | INFO     | ***************************************
[2025-12-13 14:49:32] 2025-12-13 13:48:55,272 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-13 14:49:32] 2025-12-13 13:48:55,347 | INFO     | sufficient remaining disk space (497228447744 B)
[2025-12-13 14:49:32] 2025-12-13 13:48:55,347 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 14:49:32] 2025-12-13 13:48:55,347 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 14:49:32] 2025-12-13 13:48:55,348 | INFO     | update_server=False
[2025-12-13 14:49:32] 2025-12-13 13:48:55,348 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 14:49:32] 2025-12-13 13:48:55,351 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:49:32] 2025-12-13 13:48:55,392 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:49:32] 2025-12-13 13:48:55,392 | INFO     | aborting loop
[2025-12-13 14:49:32] 2025-12-13 13:48:55,888 | INFO     | all payload control threads have been joined
[2025-12-13 14:49:32] 2025-12-13 13:48:55,935 | INFO     | all data control threads have been joined
[2025-12-13 14:49:32] 2025-12-13 13:48:56,353 | INFO     | [job] retrieve thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:56,359 | INFO     | [job] queue monitor thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:56,398 | INFO     | [job] job monitor thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:56,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 14:49:32] 2025-12-13 13:48:56,672 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:56,673 | INFO     | [job] validate thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:56,766 | INFO     | all job control threads have been joined
[2025-12-13 14:49:32] 2025-12-13 13:48:56,835 | INFO     | [payload] validate_post thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:56,894 | INFO     | [payload] control thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:56,941 | INFO     | [data] control thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:57,547 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:57,668 | INFO     | [payload] failed_post thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:57,685 | INFO     | [data] copytool_in thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:57,738 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:57,772 | INFO     | [job] control thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:48:57,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 14:49:32] 2025-12-13 13:48:58,617 | INFO     | [data] copytool_out thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:49:01,866 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:49:06,019 | INFO     | job.realtimelogging is not enabled
[2025-12-13 14:49:32] 2025-12-13 13:49:07,025 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 14:49:32] 2025-12-13 13:49:18,519 | INFO     | [monitor] cgroup control has ended
[2025-12-13 14:49:32] 2025-12-13 13:49:18,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321198102336)>', '<ExcThread(monitor, started 140320608089856)>']
[2025-12-13 14:49:32] 2025-12-13 13:49:23,623 | INFO     | all workflow threads have been joined
[2025-12-13 14:49:32] 2025-12-13 13:49:23,623 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 14:49:32] 2025-12-13 13:49:23,624 | INFO     | traces error code: 0
[2025-12-13 14:49:32] 2025-12-13 13:49:23,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 14:49:32] 2025-12-13 13:49:26,540 | INFO     | PID=15376 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 14:49:32] 2025-12-13 13:49:26,540 | INFO     | .. there are 9 such processes running
[2025-12-13 14:49:32] 2025-12-13 13:49:26,541 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 14:49:32] 2025-12-13 13:49:26,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 14:49:32] 2025-12-13 13:49:26,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 14:49:32] 2025-12-13 13:49:26,541 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 14:49:32] 2025-12-13 13:49:26,541 | INFO     | [monitor] control thread has ended
[2025-12-13 14:49:32] 2025-12-13 13:49:26,948 [wrapper] ==== pilot stdout END ====
[2025-12-13 14:49:32] 2025-12-13 13:49:27,054 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 14:49:32] 2025-12-13 13:49:27,137 [wrapper] pilotpid: 15376
[2025-12-13 14:49:32] 2025-12-13 13:49:27,202 [wrapper] Pilot exit status: 0
[2025-12-13 14:49:32] 2025-12-13 13:49:27,777 [wrapper] pandaids: 6928824001
[2025-12-13 14:49:32] 2025-12-13 13:49:28,998 [wrapper] cleanup supervisor_pilot  3679 15377
[2025-12-13 14:49:32] 2025-12-13 13:49:29,104 [wrapper] Test setup, not cleaning
[2025-12-13 14:49:32] 2025-12-13 13:49:29,145 [wrapper] apfmon messages muted
[2025-12-13 14:49:32] 2025-12-13 13:49:29,154 [wrapper] ==== wrapper stdout END ====
[2025-12-13 14:49:32] 2025-12-13 13:49:29,205 [wrapper] ==== wrapper stderr END ====
[2025-12-13 14:49:32]  *** Error codes and diagnostics ***
[2025-12-13 14:49:32]     "exeErrorCode": 0,
[2025-12-13 14:49:32]     "exeErrorDiag": "",
[2025-12-13 14:49:32]     "pilotErrorCode": 0,
[2025-12-13 14:49:32]     "pilotErrorDiag": "",
[2025-12-13 14:49:32]  *** Listing of results directory ***
[2025-12-13 14:49:32] total 339656
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc    579449 Dec 13 02:46 pilot3.tar.gz
[2025-12-13 14:49:32] -rwx------. 1 boinc boinc     36322 Dec 13 02:50 runpilot2-wrapper.sh
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc      5112 Dec 13 02:51 queuedata.json
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc       100 Dec 13 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 14:49:32] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 10:40 run_atlas
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc       105 Dec 13 10:40 job.xml
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc      6393 Dec 13 10:40 init_data.xml
[2025-12-13 14:49:32] -rw-r--r--. 2 boinc boinc 194183047 Dec 13 10:40 EVNT.47886829._000062.pool.root.1
[2025-12-13 14:49:32] -rw-r--r--. 2 boinc boinc     15847 Dec 13 10:40 start_atlas.sh
[2025-12-13 14:49:32] drwxrwx--x. 2 boinc boinc        68 Dec 13 10:40 shared
[2025-12-13 14:49:32] -rw-r--r--. 2 boinc boinc    592409 Dec 13 10:40 input.tar.gz
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc         0 Dec 13 10:40 boinc_lockfile
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc      2535 Dec 13 10:40 pandaJob.out
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc    991736 Dec 13 10:41 agis_schedconf.cvmfs.json
[2025-12-13 14:49:32] drwx------. 5 boinc boinc      4096 Dec 13 10:41 pilot3
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc 144791279 Dec 13 14:46 HITS.47886831._001549.pool.root.1
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc       531 Dec 13 14:46 boinc_task_state.xml
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc      1018 Dec 13 14:47 memory_monitor_summary.json
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc   1516240 Dec 13 14:47 agis_ddmendpoints.agis.ALL.json
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc    475820 Dec 13 14:47 log.47886831._001549.job.log.tgz.1
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc        95 Dec 13 14:48 pilot_heartbeat.json
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc      7779 Dec 13 14:48 heartbeat.json
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc        28 Dec 13 14:49 wrapper_checkpoint.txt
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc      8192 Dec 13 14:49 boinc_mmap_file
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc       820 Dec 13 14:49 pilotlog.txt
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc   1988462 Dec 13 14:49 log.47886831._001549.job.log.1
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc       357 Dec 13 14:49 output.list
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc       620 Dec 13 14:49 runtime_log
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc   2488320 Dec 13 14:49 result.tar.gz
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc      8817 Dec 13 14:49 runtime_log.err
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc       656 Dec 13 14:49 7R1NDmixTo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmPRKDmyvJzKm.diag
[2025-12-13 14:49:32] -rw-r--r--. 1 boinc boinc     20778 Dec 13 14:49 stderr.txt
[2025-12-13 14:49:32] HITS file was successfully produced:
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc 144791279 Dec 13 14:46 shared/HITS.pool.root.1
[2025-12-13 14:49:32]  *** Contents of shared directory: ***
[2025-12-13 14:49:32] total 334060
[2025-12-13 14:49:32] -rw-r--r--. 2 boinc boinc 194183047 Dec 13 10:40 ATLAS.root_0
[2025-12-13 14:49:32] -rw-r--r--. 2 boinc boinc     15847 Dec 13 10:40 start_atlas.sh
[2025-12-13 14:49:32] -rw-r--r--. 2 boinc boinc    592409 Dec 13 10:40 input.tar.gz
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc 144791279 Dec 13 14:46 HITS.pool.root.1
[2025-12-13 14:49:32] -rw-------. 1 boinc boinc   2488320 Dec 13 14:49 result.tar.gz
14:49:34 (10054): run_atlas exited; CPU time 52055.512537
14:49:34 (10054): called boinc_finish(0)

</stderr_txt>
]]>

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