Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:17:55 (233510): wrapper (7.7.26015): starting
05:17:55 (233510): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 05:17:55] Arguments: --nthreads 4
[2025-12-13 05:17:55] Threads: 4
[2025-12-13 05:17:55] Checking for CVMFS
[2025-12-13 05:17:55] No cvmfs_config command found, will try listing directly
[2025-12-13 05:17:55] CVMFS is ok
[2025-12-13 05:17:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 05:17:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 05:17:55] Further information can be found at the LHC@home message board.
[2025-12-13 05:17:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 05:17:55] Checking for apptainer binary...
[2025-12-13 05:17:55] which: no apptainer in ((null))
[2025-12-13 05:17:55] apptainer is not installed, using version from CVMFS
[2025-12-13 05:17:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 05:17:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-12-13 05:17:55] apptainer works
[2025-12-13 05:17:55] Set ATHENA_PROC_NUMBER=4
[2025-12-13 05:17:55] Set ATHENA_CORE_NUMBER=4
[2025-12-13 05:17:55] Starting ATLAS job with PandaID=6928902520
[2025-12-13 05:17:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 07:50:13]  *** The last 200 lines of the pilot log: ***
[2025-12-13 07:50:13] 2025-12-13 06:42:18,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,693 | INFO     | time since job start (8654s) is within the limit (174528.0s)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,955 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 07:50:13] 2025-12-13 06:42:19,966 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2624.080734375
[2025-12-13 07:50:13] 2025-12-13 06:42:19,980 | INFO     | using path: /scratch/boinc/var/slot36/slots/1/PanDA_Pilot-6928902520/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,981 | INFO     | extracted standard info from prmon json
[2025-12-13 07:50:13] 2025-12-13 06:42:19,981 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 07:50:13] 2025-12-13 06:42:19,981 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 07:50:13] 2025-12-13 06:42:19,981 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 07:50:13] 2025-12-13 06:42:19,982 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 07:50:13] 2025-12-13 06:42:19,985 | INFO     | fitting pss+swap vs Time
[2025-12-13 07:50:13] 2025-12-13 06:42:19,985 | INFO     | sum of square deviations: 887813855.5
[2025-12-13 07:50:13] 2025-12-13 06:42:19,986 | INFO     | sum of deviations: -33508601404.5
[2025-12-13 07:50:13] 2025-12-13 06:42:19,987 | INFO     | mean x: 1765603809.5
[2025-12-13 07:50:13] 2025-12-13 06:42:19,987 | INFO     | mean y: 2367760.3450704226
[2025-12-13 07:50:13] 2025-12-13 06:42:19,987 | INFO     | intersect: 66641240227.00963
[2025-12-13 07:50:13] 2025-12-13 06:42:19,987 | INFO     | chi2: 1.957994852362848
[2025-12-13 07:50:13] 2025-12-13 06:42:19,987 | INFO     | sum of square deviations: 797291228.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,988 | INFO     | sum of deviations: -23331310683.000008
[2025-12-13 07:50:13] 2025-12-13 06:42:19,988 | INFO     | mean x: 1765603657.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,988 | INFO     | mean y: 2384492.4963503648
[2025-12-13 07:50:13] 2025-12-13 06:42:19,989 | INFO     | intersect: 51669637332.89507
[2025-12-13 07:50:13] 2025-12-13 06:42:19,989 | INFO     | chi2: 1.1868704120684233
[2025-12-13 07:50:13] 2025-12-13 06:42:19,989 | INFO     | current chi2=1.1868704120684233 (change=39.38337423940903 %)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,989 | INFO     | sum of square deviations: 713140813.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,990 | INFO     | sum of deviations: -21941318231.5
[2025-12-13 07:50:13] 2025-12-13 06:42:19,990 | INFO     | mean x: 1765603504.5
[2025-12-13 07:50:13] 2025-12-13 06:42:19,990 | INFO     | mean y: 2387012.5984848486
[2025-12-13 07:50:13] 2025-12-13 06:42:19,990 | INFO     | intersect: 54324994352.82113
[2025-12-13 07:50:13] 2025-12-13 06:42:19,991 | INFO     | chi2: 1.1804926976949506
[2025-12-13 07:50:13] 2025-12-13 06:42:19,991 | INFO     | current chi2=1.1804926976949506 (change=0.5373555788923821 %)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,991 | INFO     | right removable region: 131
[2025-12-13 07:50:13] 2025-12-13 06:42:19,991 | INFO     | sum of square deviations: 797291228.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,992 | INFO     | sum of deviations: -42640407818.999985
[2025-12-13 07:50:13] 2025-12-13 06:42:19,992 | INFO     | mean x: 1765603962.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,992 | INFO     | mean y: 2382558.569343066
[2025-12-13 07:50:13] 2025-12-13 06:42:19,992 | INFO     | intersect: 94429701388.32343
[2025-12-13 07:50:13] 2025-12-13 06:42:19,992 | INFO     | chi2: 0.939543653936337
[2025-12-13 07:50:13] 2025-12-13 06:42:19,993 | INFO     | current chi2=0.939543653936337 (change=52.015008987254255 %)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,993 | INFO     | sum of square deviations: 713140813.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,994 | INFO     | sum of deviations: -35529184162.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,994 | INFO     | mean x: 1765604114.5
[2025-12-13 07:50:13] 2025-12-13 06:42:19,994 | INFO     | mean y: 2369658.621212121
[2025-12-13 07:50:13] 2025-12-13 06:42:19,994 | INFO     | intersect: 87966026481.68883
[2025-12-13 07:50:13] 2025-12-13 06:42:19,994 | INFO     | chi2: 0.9182582428351405
[2025-12-13 07:50:13] 2025-12-13 06:42:19,994 | INFO     | current chi2=0.9182582428351405 (change=2.2655052814223806 %)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,994 | INFO     | left removable region: 20
[2025-12-13 07:50:13] 2025-12-13 06:42:19,995 | INFO     | sum of square deviations: 424045160.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,995 | INFO     | sum of deviations: -12789152884.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,995 | INFO     | mean x: 1765604084.0
[2025-12-13 07:50:13] 2025-12-13 06:42:19,995 | INFO     | mean y: 2363171.3603603602
[2025-12-13 07:50:13] 2025-12-13 06:42:19,996 | INFO     | intersect: 53252777733.0801
[2025-12-13 07:50:13] 2025-12-13 06:42:19,996 | INFO     | chi2: 0.04228261671281502
[2025-12-13 07:50:13] 2025-12-13 06:42:19,996 | INFO     | current memory leak: -30.16 B/s (using 111 data points, chi2=0.04)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | could have reported an average CPU frequency of 2815 MHz (8 samples)
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | ..............................
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | . Timing measurements:
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | . get job = 0 s
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | . initial setup = 1 s
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | . payload setup = 5 s
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | . stage-in = 0 s
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | . payload execution = 8622 s
[2025-12-13 07:50:13] 2025-12-13 06:42:19,997 | INFO     | . stage-out = 0 s
[2025-12-13 07:50:13] 2025-12-13 06:42:19,998 | INFO     | . log creation = 0 s
[2025-12-13 07:50:13] 2025-12-13 06:42:19,998 | INFO     | ..............................
[2025-12-13 07:50:13] 2025-12-13 06:42:20,423 | INFO     | 
[2025-12-13 07:50:13] 2025-12-13 06:42:20,423 | INFO     | job summary report
[2025-12-13 07:50:13] 2025-12-13 06:42:20,423 | INFO     | --------------------------------------------------
[2025-12-13 07:50:13] 2025-12-13 06:42:20,423 | INFO     | PanDA job id: 6928902520
[2025-12-13 07:50:13] 2025-12-13 06:42:20,423 | INFO     | task id: 47886831
[2025-12-13 07:50:13] 2025-12-13 06:42:20,423 | INFO     | errors: (none)
[2025-12-13 07:50:13] 2025-12-13 06:42:20,423 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 07:50:13] 2025-12-13 06:42:20,423 | INFO     | pilot state: finished 
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | transexitcode: 0
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | exeerrorcode: 0
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | exeerrordiag: 
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | exitcode: 0
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | exitmsg: OK
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | cpuconsumptiontime: 33298 s
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | nevents: 400
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | neventsw: 0
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | pid: 244548
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | pgrp: 244548
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | corecount: 4
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | event service: False
[2025-12-13 07:50:13] 2025-12-13 06:42:20,424 | INFO     | sizes: {0: 2283998, 4: 2284260, 11: 2284288, 8632: 2312310, 8633: 2321330, 8634: 2321386, 8640: 2321708}
[2025-12-13 07:50:13] 2025-12-13 06:42:20,425 | INFO     | --------------------------------------------------
[2025-12-13 07:50:13] 2025-12-13 06:42:20,425 | INFO     | 
[2025-12-13 07:50:13] 2025-12-13 06:42:20,425 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/1
[2025-12-13 07:50:13] 2025-12-13 06:42:20,447 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,448 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 07:50:13] 2025-12-13 06:42:20,449 | INFO     | job 6928902520 has completed (purged errors)
[2025-12-13 07:50:13] 2025-12-13 06:42:20,450 | INFO     | overall cleanup function is called
[2025-12-13 07:50:13] 2025-12-13 06:42:21,456 | INFO     | --- collectZombieJob: --- 10, [244548]
[2025-12-13 07:50:13] 2025-12-13 06:42:21,457 | INFO     | zombie collector waiting for pid 244548
[2025-12-13 07:50:13] 2025-12-13 06:42:21,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 07:50:13] 2025-12-13 06:42:21,457 | INFO     | collected zombie processes
[2025-12-13 07:50:13] 2025-12-13 06:42:21,457 | INFO     | will attempt to kill all subprocesses of pid=244548
[2025-12-13 07:50:13] 2025-12-13 06:42:21,803 | INFO     | process IDs to be killed: [244548] (in reverse order)
[2025-12-13 07:50:13] 2025-12-13 06:42:21,911 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 07:50:13] 2025-12-13 06:42:21,911 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 07:50:13] 2025-12-13 06:42:21,924 | INFO     | did not find any defunct processes belonging to 244548
[2025-12-13 07:50:13] 2025-12-13 06:42:21,935 | INFO     | did not find any defunct processes belonging to 244548
[2025-12-13 07:50:13] 2025-12-13 06:42:21,936 | INFO     | ready for new job
[2025-12-13 07:50:13] 2025-12-13 06:42:21,936 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 07:50:13] 2025-12-13 06:42:21,938 | INFO     | ***************************************
[2025-12-13 07:50:13] 2025-12-13 06:42:21,938 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 07:50:13] 2025-12-13 06:42:21,938 | INFO     | ***************************************
[2025-12-13 07:50:13] 2025-12-13 06:42:21,939 | INFO     | 
[2025-12-13 07:50:13] 2025-12-13 06:42:21,943 | INFO     | architecture information:
[2025-12-13 07:50:13] 2025-12-13 06:42:21,943 | INFO     | executing command: cat /etc/os-release
[2025-12-13 07:50:13] 2025-12-13 06:42:21,960 | INFO     | cat /etc/os-release:
[2025-12-13 07:50:13] NAME="CentOS Linux"
[2025-12-13 07:50:13] VERSION="7 (Core)"
[2025-12-13 07:50:13] ID="centos"
[2025-12-13 07:50:13] ID_LIKE="rhel fedora"
[2025-12-13 07:50:13] VERSION_ID="7"
[2025-12-13 07:50:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 07:50:13] ANSI_COLOR="0;31"
[2025-12-13 07:50:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 07:50:13] HOME_URL="https://www.centos.org/"
[2025-12-13 07:50:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 07:50:13] 
[2025-12-13 07:50:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 07:50:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 07:50:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 07:50:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 07:50:13] 
[2025-12-13 07:50:13] 2025-12-13 06:42:21,961 | INFO     | ***************************************
[2025-12-13 07:50:13] 2025-12-13 06:42:22,464 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/1
[2025-12-13 07:50:13] 2025-12-13 06:42:22,481 | INFO     | sufficient remaining disk space (681313304576 B)
[2025-12-13 07:50:13] 2025-12-13 06:42:22,481 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 07:50:13] 2025-12-13 06:42:22,482 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 07:50:13] 2025-12-13 06:42:22,482 | INFO     | update_server=False
[2025-12-13 07:50:13] 2025-12-13 06:42:22,482 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 07:50:13] 2025-12-13 06:42:22,482 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 07:50:13] 2025-12-13 06:42:22,482 | INFO     | aborting loop
[2025-12-13 07:50:13] 2025-12-13 06:42:22,820 | INFO     | all payload control threads have been joined
[2025-12-13 07:50:13] 2025-12-13 06:42:23,050 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 07:50:13] 2025-12-13 06:42:23,487 | INFO     | [job] retrieve thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:23,488 | INFO     | [job] job monitor thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:23,505 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:23,523 | INFO     | all data control threads have been joined
[2025-12-13 07:50:13] 2025-12-13 06:42:23,751 | INFO     | all job control threads have been joined
[2025-12-13 07:50:13] 2025-12-13 06:42:23,814 | INFO     | [payload] validate_post thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:23,826 | INFO     | [payload] control thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:23,925 | INFO     | [job] validate thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:23,971 | INFO     | [data] copytool_in thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:24,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 07:50:13] 2025-12-13 06:42:24,516 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:24,527 | INFO     | [data] control thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:24,629 | INFO     | [payload] failed_post thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:24,757 | INFO     | [job] control thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:24,832 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:24,851 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:25,056 | INFO     | [data] copytool_out thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:25,117 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 07:50:13] 2025-12-13 06:42:26,123 | INFO     | [job] queue monitor thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:28,407 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 07:50:13] 2025-12-13 06:42:53,201 | INFO     | PID=237590 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 07:50:13] 2025-12-13 06:42:53,202 | INFO     | .. there are 6 such processes running
[2025-12-13 07:50:13] 2025-12-13 06:42:53,202 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 07:50:13] 2025-12-13 06:42:53,202 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 07:50:13] 2025-12-13 06:42:53,202 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 07:50:13] 2025-12-13 06:43:18,198 | INFO     | [monitor] cgroup control has ended
[2025-12-13 07:50:13] 2025-12-13 06:43:18,959 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23018332579648)>', '<ExcThread(monitor, started 23018092852992)>']
[2025-12-13 07:50:13] 2025-12-13 06:43:19,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 07:50:13] 2025-12-13 06:43:19,324 | INFO     | [monitor] control thread has ended
[2025-12-13 07:50:13] 2025-12-13 06:43:23,985 | INFO     | all workflow threads have been joined
[2025-12-13 07:50:13] 2025-12-13 06:43:23,985 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 07:50:13] 2025-12-13 06:43:23,986 | INFO     | traces error code: 0
[2025-12-13 07:50:13] 2025-12-13 06:43:23,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 07:50:13] 2025-12-13 06:43:24,216 [wrapper] ==== pilot stdout END ====
[2025-12-13 07:50:13] 2025-12-13 06:43:24,220 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 07:50:13] 2025-12-13 06:43:24,223 [wrapper] pilotpid: 237590
[2025-12-13 07:50:13] 2025-12-13 06:43:24,226 [wrapper] Pilot exit status: 0
[2025-12-13 07:50:13] 2025-12-13 06:43:24,239 [wrapper] pandaids: 6928902520
[2025-12-13 07:50:13] 2025-12-13 06:43:24,309 [wrapper] cleanup supervisor_pilot  432673 237591
[2025-12-13 07:50:13] 2025-12-13 06:43:24,313 [wrapper] Test setup, not cleaning
[2025-12-13 07:50:13] 2025-12-13 06:43:24,317 [wrapper] apfmon messages muted
[2025-12-13 07:50:13] 2025-12-13 06:43:24,320 [wrapper] ==== wrapper stdout END ====
[2025-12-13 07:50:13] 2025-12-13 06:43:24,324 [wrapper] ==== wrapper stderr END ====
[2025-12-13 07:50:13]  *** Error codes and diagnostics ***
[2025-12-13 07:50:13]     "exeErrorCode": 0,
[2025-12-13 07:50:13]     "exeErrorDiag": "",
[2025-12-13 07:50:13]     "pilotErrorCode": 0,
[2025-12-13 07:50:13]     "pilotErrorDiag": "",
[2025-12-13 07:50:13]  *** Listing of results directory ***
[2025-12-13 07:50:13] total 337752
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc    579449 Dec 13 04:44 pilot3.tar.gz
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc      5112 Dec 13 04:52 queuedata.json
[2025-12-13 07:50:13] -rwx------ 1 boinc boinc     36322 Dec 13 04:52 runpilot2-wrapper.sh
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc       100 Dec 13 05:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 07:50:13] -rwxr-xr-x 1 boinc boinc      7986 Dec 13 05:10 run_atlas
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc       105 Dec 13 05:10 job.xml
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc      6635 Dec 13 05:17 init_data.xml
[2025-12-13 07:50:13] -rw-r--r-- 2 boinc boinc 192728465 Dec 13 05:17 EVNT.47886829._000086.pool.root.1
[2025-12-13 07:50:13] -rw-r--r-- 2 boinc boinc    592412 Dec 13 05:17 input.tar.gz
[2025-12-13 07:50:13] -rw-r--r-- 2 boinc boinc     15847 Dec 13 05:17 start_atlas.sh
[2025-12-13 07:50:13] drwxrwx--x 2 boinc boinc      4096 Dec 13 05:17 shared
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc         0 Dec 13 05:17 boinc_lockfile
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc      2536 Dec 13 05:17 pandaJob.out
[2025-12-13 07:50:13] -rw------- 1 boinc boinc    991736 Dec 13 05:18 agis_schedconf.cvmfs.json
[2025-12-13 07:50:13] -rw------- 1 boinc boinc   1516240 Dec 13 05:18 agis_ddmendpoints.agis.ALL.json
[2025-12-13 07:50:13] drwx------ 5 boinc boinc      4096 Dec 13 05:18 pilot3
[2025-12-13 07:50:13] -rw------- 1 boinc boinc 146077410 Dec 13 07:41 HITS.47886831._002136.pool.root.1
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc       528 Dec 13 07:41 boinc_task_state.xml
[2025-12-13 07:50:13] -rw------- 1 boinc boinc      1031 Dec 13 07:42 memory_monitor_summary.json
[2025-12-13 07:50:13] -rw------- 1 boinc boinc    324198 Dec 13 07:42 log.47886831._002136.job.log.tgz.1
[2025-12-13 07:50:13] -rw------- 1 boinc boinc        95 Dec 13 07:42 pilot_heartbeat.json
[2025-12-13 07:50:13] -rw------- 1 boinc boinc      7823 Dec 13 07:42 heartbeat.json
[2025-12-13 07:50:13] -rw------- 1 boinc boinc      4832 Dec 13 07:43 pilotlog.txt
[2025-12-13 07:50:13] -rw------- 1 boinc boinc   1240170 Dec 13 07:43 log.47886831._002136.job.log.1
[2025-12-13 07:50:13] -rw------- 1 boinc boinc       357 Dec 13 07:43 output.list
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc       620 Dec 13 07:43 runtime_log
[2025-12-13 07:50:13] -rw------- 1 boinc boinc   1587200 Dec 13 07:43 result.tar.gz
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc      9205 Dec 13 07:43 runtime_log.err
[2025-12-13 07:50:13] -rw------- 1 boinc boinc       661 Dec 13 07:43 clmMDmXrVo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmYWRKDmjjmrvn.diag
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc        26 Dec 13 07:50 wrapper_checkpoint.txt
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc      8192 Dec 13 07:50 boinc_mmap_file
[2025-12-13 07:50:13] -rw-r--r-- 1 boinc boinc     20860 Dec 13 07:50 stderr.txt
[2025-12-13 07:50:13] HITS file was successfully produced:
[2025-12-13 07:50:13] -rw------- 1 boinc boinc 146077410 Dec 13 07:41 shared/HITS.pool.root.1
[2025-12-13 07:50:13]  *** Contents of shared directory: ***
[2025-12-13 07:50:13] total 333024
[2025-12-13 07:50:13] -rw-r--r-- 2 boinc boinc 192728465 Dec 13 05:17 ATLAS.root_0
[2025-12-13 07:50:13] -rw-r--r-- 2 boinc boinc    592412 Dec 13 05:17 input.tar.gz
[2025-12-13 07:50:13] -rw-r--r-- 2 boinc boinc     15847 Dec 13 05:17 start_atlas.sh
[2025-12-13 07:50:13] -rw------- 1 boinc boinc 146077410 Dec 13 07:41 HITS.pool.root.1
[2025-12-13 07:50:13] -rw------- 1 boinc boinc   1587200 Dec 13 07:43 result.tar.gz
07:50:15 (233510): run_atlas exited; CPU time 33629.677711
07:50:15 (233510): called boinc_finish(0)

</stderr_txt>
]]>

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