Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
23:07:28 (8708): wrapper (7.7.26015): starting
23:07:28 (8708): wrapper: running run_atlas (--nthreads 8)
[2025-12-12 23:07:28] Arguments: --nthreads 8
[2025-12-12 23:07:28] Threads: 8
[2025-12-12 23:07:28] Checking for CVMFS
[2025-12-12 23:07:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 23:07:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 23:07:28] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 23:07:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 23:07:29] 2.11.2.0 2850 59773 91804 153946 1 58 13177279 20275200 1 130560 0 11072976 99.652 4640852 22425 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-12 23:07:29] CVMFS is ok
[2025-12-12 23:07:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 23:07:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 23:07:29] Further information can be found at the LHC@home message board.
[2025-12-12 23:07:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 23:07:29] Checking for apptainer binary...
[2025-12-12 23:07:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 23:07:29] Running /usr/bin/apptainer --version
[2025-12-12 23:07:29] apptainer version 1.3.2-1.el7
[2025-12-12 23:07:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 23:07:30] c-204-4.aglt2.org
[2025-12-12 23:07:30] apptainer works
[2025-12-12 23:07:30] Set ATHENA_PROC_NUMBER=8
[2025-12-12 23:07:30] Set ATHENA_CORE_NUMBER=8
[2025-12-12 23:07:30] Starting ATLAS job with PandaID=6928901994
[2025-12-12 23:07:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 01:18:06]  *** The last 200 lines of the pilot log: ***
[2025-12-13 01:18:06] 2025-12-13 06:17:19,950 | INFO     | mean x: 1765602742.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,950 | INFO     | mean y: 2469184.803149606
[2025-12-13 01:18:06] 2025-12-13 06:17:19,950 | INFO     | intersect: -49612813377.000595
[2025-12-13 01:18:06] 2025-12-13 06:17:19,950 | INFO     | chi2: 1.3326239473961585
[2025-12-13 01:18:06] 2025-12-13 06:17:19,951 | INFO     | sum of square deviations: 563026370.5
[2025-12-13 01:18:06] 2025-12-13 06:17:19,951 | INFO     | sum of deviations: 17073471963.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,951 | INFO     | mean x: 1765602589.5
[2025-12-13 01:18:06] 2025-12-13 06:17:19,952 | INFO     | mean y: 2467546.2786885244
[2025-12-13 01:18:06] 2025-12-13 06:17:19,952 | INFO     | intersect: -53538481668.68965
[2025-12-13 01:18:06] 2025-12-13 06:17:19,952 | INFO     | chi2: 1.3341784251707338
[2025-12-13 01:18:06] 2025-12-13 06:17:19,952 | INFO     | current chi2=1.3341784251707338 (change=-0.11664789437504988 %)
[2025-12-13 01:18:06] 2025-12-13 06:17:19,952 | INFO     | right removable region: 121
[2025-12-13 01:18:06] 2025-12-13 06:17:19,952 | INFO     | sum of square deviations: 563026370.5
[2025-12-13 01:18:06] 2025-12-13 06:17:19,953 | INFO     | sum of deviations: 837373839.9999998
[2025-12-13 01:18:06] 2025-12-13 06:17:19,953 | INFO     | mean x: 1765602894.5
[2025-12-13 01:18:06] 2025-12-13 06:17:19,953 | INFO     | mean y: 2504437.344262295
[2025-12-13 01:18:06] 2025-12-13 06:17:19,953 | INFO     | intersect: -2623428828.2141747
[2025-12-13 01:18:06] 2025-12-13 06:17:19,954 | INFO     | chi2: 0.02931011655124809
[2025-12-13 01:18:06] 2025-12-13 06:17:19,954 | INFO     | current chi2=0.02931011655124809 (change=97.80057107569485 %)
[2025-12-13 01:18:06] 2025-12-13 06:17:19,954 | INFO     | sum of square deviations: 496597218.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,955 | INFO     | sum of deviations: 2807979694.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,955 | INFO     | mean x: 1765603047.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,955 | INFO     | mean y: 2499906.0512820515
[2025-12-13 01:18:06] 2025-12-13 06:17:19,955 | INFO     | intersect: -9980998438.155165
[2025-12-13 01:18:06] 2025-12-13 06:17:19,955 | INFO     | chi2: 0.001553543811511143
[2025-12-13 01:18:06] 2025-12-13 06:17:19,955 | INFO     | current chi2=0.001553543811511143 (change=94.69963277425114 %)
[2025-12-13 01:18:06] 2025-12-13 06:17:19,956 | INFO     | sum of square deviations: 435610028.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,956 | INFO     | sum of deviations: 1953584658.0000002
[2025-12-13 01:18:06] 2025-12-13 06:17:19,956 | INFO     | mean x: 1765603199.5
[2025-12-13 01:18:06] 2025-12-13 06:17:19,957 | INFO     | mean y: 2502036.1428571427
[2025-12-13 01:18:06] 2025-12-13 06:17:19,957 | INFO     | intersect: -7915716326.495281
[2025-12-13 01:18:06] 2025-12-13 06:17:19,957 | INFO     | chi2: 0.0007357889789223915
[2025-12-13 01:18:06] 2025-12-13 06:17:19,957 | INFO     | current chi2=0.0007357889789223915 (change=52.638028392216086 %)
[2025-12-13 01:18:06] 2025-12-13 06:17:19,957 | INFO     | sum of square deviations: 379832238.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,958 | INFO     | sum of deviations: 1468302817.9999983
[2025-12-13 01:18:06] 2025-12-13 06:17:19,958 | INFO     | mean x: 1765603352.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,958 | INFO     | mean y: 2503361.9813084113
[2025-12-13 01:18:06] 2025-12-13 06:17:19,958 | INFO     | intersect: -6822721350.018633
[2025-12-13 01:18:06] 2025-12-13 06:17:19,959 | INFO     | chi2: 0.0005517432773082086
[2025-12-13 01:18:06] 2025-12-13 06:17:19,959 | INFO     | current chi2=0.0005517432773082086 (change=25.013381130515068 %)
[2025-12-13 01:18:06] 2025-12-13 06:17:19,959 | INFO     | sum of square deviations: 329031285.5
[2025-12-13 01:18:06] 2025-12-13 06:17:19,959 | INFO     | sum of deviations: 1087910600.0000002
[2025-12-13 01:18:06] 2025-12-13 06:17:19,959 | INFO     | mean x: 1765603504.5
[2025-12-13 01:18:06] 2025-12-13 06:17:19,960 | INFO     | mean y: 2504502.9411764704
[2025-12-13 01:18:06] 2025-12-13 06:17:19,960 | INFO     | intersect: -5835295282.643949
[2025-12-13 01:18:06] 2025-12-13 06:17:19,960 | INFO     | chi2: 0.00042656033843239293
[2025-12-13 01:18:06] 2025-12-13 06:17:19,960 | INFO     | current chi2=0.00042656033843239293 (change=22.688620600244732 %)
[2025-12-13 01:18:06] 2025-12-13 06:17:19,960 | INFO     | left removable region: 50
[2025-12-13 01:18:06] 2025-12-13 06:17:19,961 | INFO     | sum of square deviations: 110960220.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,961 | INFO     | sum of deviations: 97853638.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,961 | INFO     | mean x: 1765604084.0
[2025-12-13 01:18:06] 2025-12-13 06:17:19,961 | INFO     | mean y: 2508132.056338028
[2025-12-13 01:18:06] 2025-12-13 06:17:19,961 | INFO     | intersect: -1554543421.0773668
[2025-12-13 01:18:06] 2025-12-13 06:17:19,961 | INFO     | chi2: 5.757973278254428e-06
[2025-12-13 01:18:06] 2025-12-13 06:17:19,962 | INFO     | current memory leak: 0.88 B/s (using 71 data points, chi2=0.00)
[2025-12-13 01:18:06] 2025-12-13 06:17:19,962 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-12-13 01:18:06] 2025-12-13 06:17:19,962 | INFO     | ..............................
[2025-12-13 01:18:06] 2025-12-13 06:17:19,962 | INFO     | . Timing measurements:
[2025-12-13 01:18:06] 2025-12-13 06:17:19,962 | INFO     | . get job = 0 s
[2025-12-13 01:18:06] 2025-12-13 06:17:19,962 | INFO     | . initial setup = 2 s
[2025-12-13 01:18:06] 2025-12-13 06:17:19,963 | INFO     | . payload setup = 8 s
[2025-12-13 01:18:06] 2025-12-13 06:17:19,963 | INFO     | . stage-in = 0 s
[2025-12-13 01:18:06] 2025-12-13 06:17:19,963 | INFO     | . payload execution = 7733 s
[2025-12-13 01:18:06] 2025-12-13 06:17:19,963 | INFO     | . stage-out = 0 s
[2025-12-13 01:18:06] 2025-12-13 06:17:19,963 | INFO     | . log creation = 0 s
[2025-12-13 01:18:06] 2025-12-13 06:17:19,963 | INFO     | ..............................
[2025-12-13 01:18:06] 2025-12-13 06:17:20,386 | INFO     | 
[2025-12-13 01:18:06] 2025-12-13 06:17:20,386 | INFO     | job summary report
[2025-12-13 01:18:06] 2025-12-13 06:17:20,386 | INFO     | --------------------------------------------------
[2025-12-13 01:18:06] 2025-12-13 06:17:20,387 | INFO     | PanDA job id: 6928901994
[2025-12-13 01:18:06] 2025-12-13 06:17:20,387 | INFO     | task id: 47886831
[2025-12-13 01:18:06] 2025-12-13 06:17:20,387 | INFO     | errors: (none)
[2025-12-13 01:18:06] 2025-12-13 06:17:20,387 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 01:18:06] 2025-12-13 06:17:20,387 | INFO     | pilot state: finished 
[2025-12-13 01:18:06] 2025-12-13 06:17:20,388 | INFO     | transexitcode: 0
[2025-12-13 01:18:06] 2025-12-13 06:17:20,388 | INFO     | exeerrorcode: 0
[2025-12-13 01:18:06] 2025-12-13 06:17:20,388 | INFO     | exeerrordiag: 
[2025-12-13 01:18:06] 2025-12-13 06:17:20,388 | INFO     | exitcode: 0
[2025-12-13 01:18:06] 2025-12-13 06:17:20,388 | INFO     | exitmsg: OK
[2025-12-13 01:18:06] 2025-12-13 06:17:20,389 | INFO     | cpuconsumptiontime: 58270 s
[2025-12-13 01:18:06] 2025-12-13 06:17:20,389 | INFO     | nevents: 400
[2025-12-13 01:18:06] 2025-12-13 06:17:20,389 | INFO     | neventsw: 0
[2025-12-13 01:18:06] 2025-12-13 06:17:20,389 | INFO     | pid: 18832
[2025-12-13 01:18:06] 2025-12-13 06:17:20,389 | INFO     | pgrp: 18832
[2025-12-13 01:18:06] 2025-12-13 06:17:20,390 | INFO     | corecount: 8
[2025-12-13 01:18:06] 2025-12-13 06:17:20,390 | INFO     | event service: False
[2025-12-13 01:18:06] 2025-12-13 06:17:20,390 | INFO     | sizes: {0: 2283159, 1: 2284015, 7: 2284277, 12: 2284305, 7745: 2311895, 7746: 2320893, 7747: 2321077, 7754: 2321271}
[2025-12-13 01:18:06] 2025-12-13 06:17:20,390 | INFO     | --------------------------------------------------
[2025-12-13 01:18:06] 2025-12-13 06:17:20,391 | INFO     | 
[2025-12-13 01:18:06] 2025-12-13 06:17:20,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 01:18:06] 2025-12-13 06:17:20,422 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,423 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,423 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,423 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,424 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,426 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,426 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,426 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,426 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,427 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 01:18:06] 2025-12-13 06:17:20,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 01:18:06] 2025-12-13 06:17:20,428 | INFO     | job 6928901994 has completed (purged errors)
[2025-12-13 01:18:06] 2025-12-13 06:17:20,429 | INFO     | overall cleanup function is called
[2025-12-13 01:18:06] 2025-12-13 06:17:21,438 | INFO     | --- collectZombieJob: --- 10, [18832]
[2025-12-13 01:18:06] 2025-12-13 06:17:21,438 | INFO     | zombie collector waiting for pid 18832
[2025-12-13 01:18:06] 2025-12-13 06:17:21,438 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 01:18:06] 2025-12-13 06:17:21,438 | INFO     | collected zombie processes
[2025-12-13 01:18:06] 2025-12-13 06:17:21,438 | INFO     | will attempt to kill all subprocesses of pid=18832
[2025-12-13 01:18:06] 2025-12-13 06:17:21,531 | INFO     | process IDs to be killed: [18832] (in reverse order)
[2025-12-13 01:18:06] 2025-12-13 06:17:21,593 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 01:18:06] 2025-12-13 06:17:21,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 01:18:06] 2025-12-13 06:17:21,599 | INFO     | did not find any defunct processes belonging to 18832
[2025-12-13 01:18:06] 2025-12-13 06:17:21,602 | INFO     | did not find any defunct processes belonging to 18832
[2025-12-13 01:18:06] 2025-12-13 06:17:21,602 | INFO     | ready for new job
[2025-12-13 01:18:06] 2025-12-13 06:17:21,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 01:18:06] 2025-12-13 06:17:21,604 | INFO     | ***************************************
[2025-12-13 01:18:06] 2025-12-13 06:17:21,605 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 01:18:06] 2025-12-13 06:17:21,605 | INFO     | ***************************************
[2025-12-13 01:18:06] 2025-12-13 06:17:21,605 | INFO     | 
[2025-12-13 01:18:06] 2025-12-13 06:17:21,605 | INFO     | architecture information:
[2025-12-13 01:18:06] 2025-12-13 06:17:21,606 | INFO     | executing command: cat /etc/os-release
[2025-12-13 01:18:06] 2025-12-13 06:17:21,624 | INFO     | cat /etc/os-release:
[2025-12-13 01:18:06] NAME="CentOS Linux"
[2025-12-13 01:18:06] VERSION="7 (Core)"
[2025-12-13 01:18:06] ID="centos"
[2025-12-13 01:18:06] ID_LIKE="rhel fedora"
[2025-12-13 01:18:06] VERSION_ID="7"
[2025-12-13 01:18:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 01:18:06] ANSI_COLOR="0;31"
[2025-12-13 01:18:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 01:18:06] HOME_URL="https://www.centos.org/"
[2025-12-13 01:18:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 01:18:06] 
[2025-12-13 01:18:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 01:18:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 01:18:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 01:18:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 01:18:06] 
[2025-12-13 01:18:06] 2025-12-13 06:17:21,625 | INFO     | ***************************************
[2025-12-13 01:18:06] 2025-12-13 06:17:22,128 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 01:18:06] 2025-12-13 06:17:22,193 | INFO     | sufficient remaining disk space (18678284288 B)
[2025-12-13 01:18:06] 2025-12-13 06:17:22,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 01:18:06] 2025-12-13 06:17:22,194 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 01:18:06] 2025-12-13 06:17:22,194 | INFO     | update_server=False
[2025-12-13 01:18:06] 2025-12-13 06:17:22,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 01:18:06] 2025-12-13 06:17:22,928 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 01:18:06] 2025-12-13 06:17:23,094 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 01:18:06] 2025-12-13 06:17:23,095 | INFO     | aborting loop
[2025-12-13 01:18:06] 2025-12-13 06:17:23,178 | INFO     | all data control threads have been joined
[2025-12-13 01:18:06] 2025-12-13 06:17:23,200 | INFO     | [job] retrieve thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:23,287 | INFO     | all payload control threads have been joined
[2025-12-13 01:18:06] 2025-12-13 06:17:23,299 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 01:18:06] 2025-12-13 06:17:23,600 | INFO     | all job control threads have been joined
[2025-12-13 01:18:06] 2025-12-13 06:17:23,619 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:23,689 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:23,707 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:23,708 | INFO     | [data] copytool_in thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:23,963 | INFO     | [payload] failed_post thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:24,100 | INFO     | [job] job monitor thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:24,184 | INFO     | [data] control thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:24,292 | INFO     | [payload] control thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:24,512 | INFO     | [payload] validate_post thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:24,606 | INFO     | [job] control thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:24,626 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:24,698 | INFO     | [job] validate thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:24,934 | INFO     | [data] copytool_out thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:25,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 01:18:06] 2025-12-13 06:17:26,084 | INFO     | [job] queue monitor thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:27,305 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 01:18:06] 2025-12-13 06:17:53,151 | INFO     | PID=12385 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-13 01:18:06] 2025-12-13 06:17:53,152 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 01:18:06] 2025-12-13 06:17:53,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 01:18:06] 2025-12-13 06:17:53,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 01:18:06] 2025-12-13 06:18:00,262 | INFO     | [monitor] cgroup control has ended
[2025-12-13 01:18:06] 2025-12-13 06:18:01,267 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140017630525248)>', '<ExcThread(monitor, started 140016512648960)>']
[2025-12-13 01:18:06] 2025-12-13 06:18:02,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 01:18:06] 2025-12-13 06:18:02,191 | INFO     | [monitor] control thread has ended
[2025-12-13 01:18:06] 2025-12-13 06:18:06,268 | INFO     | all workflow threads have been joined
[2025-12-13 01:18:06] 2025-12-13 06:18:06,269 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 01:18:06] 2025-12-13 06:18:06,271 | INFO     | traces error code: 0
[2025-12-13 01:18:06] 2025-12-13 06:18:06,272 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 01:18:06] 2025-12-13 06:18:06,433 [wrapper] ==== pilot stdout END ====
[2025-12-13 01:18:06] 2025-12-13 06:18:06,438 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 01:18:06] 2025-12-13 06:18:06,441 [wrapper] pilotpid: 12385
[2025-12-13 01:18:06] 2025-12-13 06:18:06,446 [wrapper] Pilot exit status: 0
[2025-12-13 01:18:06] 2025-12-13 06:18:06,465 [wrapper] pandaids: 6928901994
[2025-12-13 01:18:06] 2025-12-13 06:18:06,524 [wrapper] cleanup supervisor_pilot  8767 12386
[2025-12-13 01:18:06] 2025-12-13 06:18:06,530 [wrapper] Test setup, not cleaning
[2025-12-13 01:18:06] 2025-12-13 06:18:06,535 [wrapper] apfmon messages muted
[2025-12-13 01:18:06] 2025-12-13 06:18:06,540 [wrapper] ==== wrapper stdout END ====
[2025-12-13 01:18:06] 2025-12-13 06:18:06,545 [wrapper] ==== wrapper stderr END ====
[2025-12-13 01:18:06]  *** Error codes and diagnostics ***
[2025-12-13 01:18:06]     "exeErrorCode": 0,
[2025-12-13 01:18:06]     "exeErrorDiag": "",
[2025-12-13 01:18:06]     "pilotErrorCode": 0,
[2025-12-13 01:18:06]     "pilotErrorDiag": "",
[2025-12-13 01:18:06]  *** Listing of results directory ***
[2025-12-13 01:18:06] total 338160
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas    579449 Dec 12 22:44 pilot3.tar.gz
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas      5112 Dec 12 22:52 queuedata.json
[2025-12-13 01:18:06] -rwx------ 1 boincer umatlas     36322 Dec 12 22:52 runpilot2-wrapper.sh
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas       100 Dec 12 23:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 01:18:06] -rwxr-xr-x 1 boincer umatlas      7986 Dec 12 23:07 run_atlas
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas       105 Dec 12 23:07 job.xml
[2025-12-13 01:18:06] -rw-r--r-- 2 boincer umatlas 192011119 Dec 12 23:07 EVNT.47886829._000076.pool.root.1
[2025-12-13 01:18:06] -rw-r--r-- 2 boincer umatlas     15847 Dec 12 23:07 start_atlas.sh
[2025-12-13 01:18:06] drwxrwx--x 2 boincer umatlas      4096 Dec 12 23:07 shared
[2025-12-13 01:18:06] -rw-r--r-- 2 boincer umatlas    592413 Dec 12 23:07 input.tar.gz
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas         0 Dec 12 23:07 boinc_lockfile
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas      2536 Dec 12 23:07 pandaJob.out
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas        57 Dec 12 23:07 setup.sh.local
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas    991720 Dec 12 23:07 agis_schedconf.cvmfs.json
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas   1516240 Dec 12 23:07 agis_ddmendpoints.agis.ALL.json
[2025-12-13 01:18:06] drwx------ 5 boincer umatlas      4096 Dec 12 23:07 pilot3
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas      5909 Dec 13 01:13 init_data.xml
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas 147437559 Dec 13 01:16 HITS.47886831._001883.pool.root.1
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas       530 Dec 13 01:17 boinc_task_state.xml
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas      1047 Dec 13 01:17 memory_monitor_summary.json
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas    364161 Dec 13 01:17 log.47886831._001883.job.log.tgz.1
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas      7839 Dec 13 01:17 heartbeat.json
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas        95 Dec 13 01:17 pilot_heartbeat.json
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 01:17 boinc_mmap_file
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas        27 Dec 13 01:17 wrapper_checkpoint.txt
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas      4746 Dec 13 01:18 pilotlog.txt
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas   1093208 Dec 13 01:18 log.47886831._001883.job.log.1
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas       357 Dec 13 01:18 output.list
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas       620 Dec 13 01:18 runtime_log
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas   1474560 Dec 13 01:18 result.tar.gz
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas      9337 Dec 13 01:18 runtime_log.err
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas       659 Dec 13 01:18 PLQLDmLrVo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOVRKDmcFDI4n.diag
[2025-12-13 01:18:06] -rw-r--r-- 1 boincer umatlas     20868 Dec 13 01:18 stderr.txt
[2025-12-13 01:18:06] HITS file was successfully produced:
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas 147437559 Dec 13 01:16 shared/HITS.pool.root.1
[2025-12-13 01:18:06]  *** Contents of shared directory: ***
[2025-12-13 01:18:06] total 333536
[2025-12-13 01:18:06] -rw-r--r-- 2 boincer umatlas 192011119 Dec 12 23:07 ATLAS.root_0
[2025-12-13 01:18:06] -rw-r--r-- 2 boincer umatlas     15847 Dec 12 23:07 start_atlas.sh
[2025-12-13 01:18:06] -rw-r--r-- 2 boincer umatlas    592413 Dec 12 23:07 input.tar.gz
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas 147437559 Dec 13 01:16 HITS.pool.root.1
[2025-12-13 01:18:06] -rw------- 1 boincer umatlas   1474560 Dec 13 01:18 result.tar.gz
01:18:08 (8708): run_atlas exited; CPU time 58258.323632
01:18:08 (8708): called boinc_finish(0)

</stderr_txt>
]]>

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