Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
06:13:18 (3605245): wrapper (7.7.26015): starting
06:13:18 (3605245): wrapper: running run_atlas (--nthreads 10)
[2025-12-13 06:13:18] Arguments: --nthreads 10
[2025-12-13 06:13:18] Threads: 10
[2025-12-13 06:13:18] Checking for CVMFS
[2025-12-13 06:13:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 06:13:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 06:13:18] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 06:13:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 06:13:18] 2.13.3.0 11319 10029 72344 153962 0 188 3697006 4096000 11921 130560 0 1524603640 99.999 1046072 530 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-13 06:13:18] CVMFS is ok
[2025-12-13 06:13:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 06:13:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-13 06:13:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-13 06:13:18] Further information can be found at the LHC@home message board.
[2025-12-13 06:13:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 06:13:18] Checking for apptainer binary...
[2025-12-13 06:13:18] apptainer is not installed, using version from CVMFS
[2025-12-13 06:13:18] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 06:13:18] 7950x-linux
[2025-12-13 06:13:18] apptainer works
[2025-12-13 06:13:18] Set ATHENA_PROC_NUMBER=10
[2025-12-13 06:13:18] Set ATHENA_CORE_NUMBER=10
[2025-12-13 06:13:18] Starting ATLAS job with PandaID=6928824101
[2025-12-13 06:13:18] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc505/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 09:32:21]  *** The last 200 lines of the pilot log: ***
[2025-12-13 09:32:21] 2025-12-13 17:31:47,314 | INFO     | time since job start (11887s) is within the limit (174528.0s)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,500 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 09:32:21] 2025-12-13 17:31:47,503 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9958125
[2025-12-13 09:32:21] 2025-12-13 17:31:47,506 | INFO     | using path: /var/lib/multiboinc/boinc505/slots/0/PanDA_Pilot-6928824101/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,507 | INFO     | extracted standard info from prmon json
[2025-12-13 09:32:21] 2025-12-13 17:31:47,507 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 09:32:21] 2025-12-13 17:31:47,507 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 09:32:21] 2025-12-13 17:31:47,507 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 09:32:21] 2025-12-13 17:31:47,507 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 09:32:21] 2025-12-13 17:31:47,509 | INFO     | fitting pss+swap vs Time
[2025-12-13 09:32:21] 2025-12-13 17:31:47,509 | INFO     | sum of square deviations: 2299168690.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,510 | INFO     | sum of deviations: -50418103202.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,510 | INFO     | mean x: 1765641166.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,510 | INFO     | mean y: 2593488.38974359
[2025-12-13 09:32:21] 2025-12-13 17:31:47,510 | INFO     | intersect: 38721056780.044785
[2025-12-13 09:32:21] 2025-12-13 17:31:47,510 | INFO     | chi2: 2.1623249301111005
[2025-12-13 09:32:21] 2025-12-13 17:31:47,510 | INFO     | sum of square deviations: 2126802667.5
[2025-12-13 09:32:21] 2025-12-13 17:31:47,511 | INFO     | sum of deviations: -35327503400.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,511 | INFO     | mean x: 1765641013.5
[2025-12-13 09:32:21] 2025-12-13 17:31:47,511 | INFO     | mean y: 2606591.3263157895
[2025-12-13 09:32:21] 2025-12-13 17:31:47,511 | INFO     | intersect: 29330992275.984905
[2025-12-13 09:32:21] 2025-12-13 17:31:47,511 | INFO     | chi2: 1.3423155853068507
[2025-12-13 09:32:21] 2025-12-13 17:31:47,511 | INFO     | current chi2=1.3423155853068507 (change=37.922577378882536 %)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,511 | INFO     | sum of square deviations: 1963274020.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,513 | INFO     | sum of deviations: -34016510554.000008
[2025-12-13 09:32:21] 2025-12-13 17:31:47,513 | INFO     | mean x: 1765640861.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,513 | INFO     | mean y: 2607814.135135135
[2025-12-13 09:32:21] 2025-12-13 17:31:47,513 | INFO     | intersect: 30594843218.330093
[2025-12-13 09:32:21] 2025-12-13 17:31:47,513 | INFO     | chi2: 1.3379294673474698
[2025-12-13 09:32:21] 2025-12-13 17:31:47,513 | INFO     | current chi2=1.3379294673474698 (change=0.3267575827467035 %)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,513 | INFO     | right removable region: 184
[2025-12-13 09:32:21] 2025-12-13 17:31:47,513 | INFO     | sum of square deviations: 2126802667.5
[2025-12-13 09:32:21] 2025-12-13 17:31:47,514 | INFO     | sum of deviations: -68218677719.000015
[2025-12-13 09:32:21] 2025-12-13 17:31:47,514 | INFO     | mean x: 1765641318.5
[2025-12-13 09:32:21] 2025-12-13 17:31:47,514 | INFO     | mean y: 2608876.8736842107
[2025-12-13 09:32:21] 2025-12-13 17:31:47,514 | INFO     | intersect: 56636784635.0258
[2025-12-13 09:32:21] 2025-12-13 17:31:47,514 | INFO     | chi2: 1.0397593990670515
[2025-12-13 09:32:21] 2025-12-13 17:31:47,514 | INFO     | current chi2=1.0397593990670515 (change=51.91474765942653 %)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,514 | INFO     | sum of square deviations: 1963274020.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,515 | INFO     | sum of deviations: -59709646808.999985
[2025-12-13 09:32:21] 2025-12-13 17:31:47,515 | INFO     | mean x: 1765641471.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,515 | INFO     | mean y: 2600937.0486486484
[2025-12-13 09:32:21] 2025-12-13 17:31:47,515 | INFO     | intersect: 53701589234.53204
[2025-12-13 09:32:21] 2025-12-13 17:31:47,515 | INFO     | chi2: 1.0262111809079297
[2025-12-13 09:32:21] 2025-12-13 17:31:47,515 | INFO     | current chi2=1.0262111809079297 (change=1.303014733146748 %)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,515 | INFO     | left removable region: 20
[2025-12-13 09:32:21] 2025-12-13 17:31:47,515 | INFO     | sum of square deviations: 1367709365.0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | sum of deviations: -26823717056.499992
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | mean x: 1765641440.5
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | mean y: 2597761.1646341463
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | intersect: 34630617160.01043
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | chi2: 0.12273242843383864
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | current memory leak: -19.61 B/s (using 164 data points, chi2=0.12)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | could have reported an average CPU frequency of 3999 MHz (10 samples)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | ..............................
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | . Timing measurements:
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | . get job = 0 s
[2025-12-13 09:32:21] 2025-12-13 17:31:47,516 | INFO     | . initial setup = 10 s
[2025-12-13 09:32:21] 2025-12-13 17:31:47,517 | INFO     | . payload setup = 6 s
[2025-12-13 09:32:21] 2025-12-13 17:31:47,517 | INFO     | . stage-in = 0 s
[2025-12-13 09:32:21] 2025-12-13 17:31:47,517 | INFO     | . payload execution = 11846 s
[2025-12-13 09:32:21] 2025-12-13 17:31:47,517 | INFO     | . stage-out = 3 s
[2025-12-13 09:32:21] 2025-12-13 17:31:47,517 | INFO     | . log creation = 0 s
[2025-12-13 09:32:21] 2025-12-13 17:31:47,517 | INFO     | ..............................
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | 
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | job summary report
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | --------------------------------------------------
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | PanDA job id: 6928824101
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | task id: 47886831
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | errors: (none)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | pilot state: finished 
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | transexitcode: 0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | exeerrorcode: 0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | exeerrordiag: 
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | exitcode: 0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | exitmsg: OK
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | cpuconsumptiontime: 24043 s
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | nevents: 400
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | neventsw: 0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | pid: 3615757
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | pgrp: 3615757
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | corecount: 10
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | event service: False
[2025-12-13 09:32:21] 2025-12-13 17:31:47,732 | INFO     | sizes: {0: 2284000, 5: 2284262, 11: 2284318, 11857: 2313771, 11861: 2322797, 11863: 2322853, 11871: 2323175}
[2025-12-13 09:32:21] 2025-12-13 17:31:47,733 | INFO     | --------------------------------------------------
[2025-12-13 09:32:21] 2025-12-13 17:31:47,733 | INFO     | 
[2025-12-13 09:32:21] 2025-12-13 17:31:47,733 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc505/slots/0
[2025-12-13 09:32:21] 2025-12-13 17:31:47,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | job 6928824101 has completed (purged errors)
[2025-12-13 09:32:21] 2025-12-13 17:31:47,796 | INFO     | overall cleanup function is called
[2025-12-13 09:32:21] 2025-12-13 17:31:48,806 | INFO     | --- collectZombieJob: --- 10, [3615757]
[2025-12-13 09:32:21] 2025-12-13 17:31:48,806 | INFO     | zombie collector waiting for pid 3615757
[2025-12-13 09:32:21] 2025-12-13 17:31:48,806 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 09:32:21] 2025-12-13 17:31:48,806 | INFO     | collected zombie processes
[2025-12-13 09:32:21] 2025-12-13 17:31:48,806 | INFO     | will attempt to kill all subprocesses of pid=3615757
[2025-12-13 09:32:21] 2025-12-13 17:31:49,200 | INFO     | process IDs to be killed: [3615757] (in reverse order)
[2025-12-13 09:32:21] 2025-12-13 17:31:49,385 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 09:32:21] 2025-12-13 17:31:49,385 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 09:32:21] 2025-12-13 17:31:49,391 | INFO     | did not find any defunct processes belonging to 3615757
[2025-12-13 09:32:21] 2025-12-13 17:31:49,400 | INFO     | did not find any defunct processes belonging to 3615757
[2025-12-13 09:32:21] 2025-12-13 17:31:49,400 | INFO     | ready for new job
[2025-12-13 09:32:21] 2025-12-13 17:31:49,400 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 09:32:21] 2025-12-13 17:31:49,407 | INFO     | ***************************************
[2025-12-13 09:32:21] 2025-12-13 17:31:49,407 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 09:32:21] 2025-12-13 17:31:49,407 | INFO     | ***************************************
[2025-12-13 09:32:21] 2025-12-13 17:31:49,408 | INFO     | 
[2025-12-13 09:32:21] 2025-12-13 17:31:49,410 | INFO     | architecture information:
[2025-12-13 09:32:21] 2025-12-13 17:31:49,411 | INFO     | executing command: cat /etc/os-release
[2025-12-13 09:32:21] 2025-12-13 17:31:49,442 | INFO     | cat /etc/os-release:
[2025-12-13 09:32:21] NAME="CentOS Linux"
[2025-12-13 09:32:21] VERSION="7 (Core)"
[2025-12-13 09:32:21] ID="centos"
[2025-12-13 09:32:21] ID_LIKE="rhel fedora"
[2025-12-13 09:32:21] VERSION_ID="7"
[2025-12-13 09:32:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 09:32:21] ANSI_COLOR="0;31"
[2025-12-13 09:32:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 09:32:21] HOME_URL="https://www.centos.org/"
[2025-12-13 09:32:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 09:32:21] 
[2025-12-13 09:32:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 09:32:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 09:32:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 09:32:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 09:32:21] 
[2025-12-13 09:32:21] 2025-12-13 17:31:49,443 | INFO     | ***************************************
[2025-12-13 09:32:21] 2025-12-13 17:31:49,945 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc505/slots/0
[2025-12-13 09:32:21] 2025-12-13 17:31:49,963 | INFO     | sufficient remaining disk space (207889629184 B)
[2025-12-13 09:32:21] 2025-12-13 17:31:49,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 09:32:21] 2025-12-13 17:31:49,964 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 09:32:21] 2025-12-13 17:31:49,964 | INFO     | update_server=False
[2025-12-13 09:32:21] 2025-12-13 17:31:49,964 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 09:32:21] 2025-12-13 17:31:49,964 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 09:32:21] 2025-12-13 17:31:50,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 09:32:21] 2025-12-13 17:31:50,001 | INFO     | aborting loop
[2025-12-13 09:32:21] 2025-12-13 17:31:50,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 09:32:21] 2025-12-13 17:31:50,122 | INFO     | all data control threads have been joined
[2025-12-13 09:32:21] 2025-12-13 17:31:50,300 | INFO     | all payload control threads have been joined
[2025-12-13 09:32:21] 2025-12-13 17:31:50,914 | INFO     | all job control threads have been joined
[2025-12-13 09:32:21] 2025-12-13 17:31:50,969 | INFO     | [job] retrieve thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:51,016 | INFO     | [job] job monitor thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:51,080 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:51,127 | INFO     | [data] control thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:51,305 | INFO     | [payload] control thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:51,347 | INFO     | [job] validate thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:51,675 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:51,747 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:51,919 | INFO     | [job] control thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:52,070 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:52,113 | INFO     | [data] copytool_out thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:52,268 | INFO     | [payload] validate_post thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:52,470 | INFO     | [data] copytool_in thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:52,472 | INFO     | [payload] failed_post thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:52,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 09:32:21] 2025-12-13 17:31:53,632 | INFO     | [job] queue monitor thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:53,976 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 09:32:21] 2025-12-13 17:31:59,721 | INFO     | [monitor] cgroup control has ended
[2025-12-13 09:32:21] 2025-12-13 17:32:00,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135391902984000)>', '<ExcThread(monitor, started 135391185200896)>']
[2025-12-13 09:32:21] 2025-12-13 17:32:05,751 | INFO     | all workflow threads have been joined
[2025-12-13 09:32:21] 2025-12-13 17:32:05,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 09:32:21] 2025-12-13 17:32:05,751 | INFO     | traces error code: 0
[2025-12-13 09:32:21] 2025-12-13 17:32:05,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 09:32:21] 2025-12-13 17:32:20,759 | INFO     | PID=3609088 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 09:32:21] 2025-12-13 17:32:20,759 | INFO     | .. there are 18 such processes running
[2025-12-13 09:32:21] 2025-12-13 17:32:20,760 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 09:32:21] 2025-12-13 17:32:20,760 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 09:32:21] 2025-12-13 17:32:20,760 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 09:32:21] 2025-12-13 17:32:20,760 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 09:32:21] 2025-12-13 17:32:20,760 | CRITICAL | thread 'MainThread' is not alive
[2025-12-13 09:32:21] 2025-12-13 17:32:20,760 | INFO     | [monitor] control thread has ended
[2025-12-13 09:32:21] 2025-12-13 17:32:20,905 [wrapper] ==== pilot stdout END ====
[2025-12-13 09:32:21] 2025-12-13 17:32:20,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 09:32:21] 2025-12-13 17:32:20,915 [wrapper] pilotpid: 3609088
[2025-12-13 09:32:21] 2025-12-13 17:32:20,916 [wrapper] Pilot exit status: 0
[2025-12-13 09:32:21] 2025-12-13 17:32:20,942 [wrapper] pandaids: 6928824101
[2025-12-13 09:32:21] 2025-12-13 17:32:21,022 [wrapper] cleanup supervisor_pilot 4149100 3609089
[2025-12-13 09:32:21] 2025-12-13 17:32:21,024 [wrapper] Test setup, not cleaning
[2025-12-13 09:32:21] 2025-12-13 17:32:21,025 [wrapper] apfmon messages muted
[2025-12-13 09:32:21] 2025-12-13 17:32:21,027 [wrapper] ==== wrapper stdout END ====
[2025-12-13 09:32:21] 2025-12-13 17:32:21,031 [wrapper] ==== wrapper stderr END ====
[2025-12-13 09:32:21]  *** Error codes and diagnostics ***
[2025-12-13 09:32:21]     "exeErrorCode": 0,
[2025-12-13 09:32:21]     "exeErrorDiag": "",
[2025-12-13 09:32:21]     "pilotErrorCode": 0,
[2025-12-13 09:32:21]     "pilotErrorDiag": "",
[2025-12-13 09:32:21]  *** Listing of results directory ***
[2025-12-13 09:32:21] total 335060
[2025-12-13 09:32:21] -rw-r--r-- 1 root root    579449 Dec 12 17:46 pilot3.tar.gz
[2025-12-13 09:32:21] -rwx------ 1 4871 1028     36322 Dec 12 17:50 runpilot2-wrapper.sh
[2025-12-13 09:32:21] -rw-r--r-- 1 root root      5112 Dec 12 17:51 queuedata.json
[2025-12-13 09:32:21] -rw-r--r-- 1 root root       100 Dec 13 06:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 09:32:21] -rwxr-xr-x 1 root root      7986 Dec 13 06:13 run_atlas
[2025-12-13 09:32:21] -rw-r--r-- 1 root root       105 Dec 13 06:13 job.xml
[2025-12-13 09:32:21] -rw-r--r-- 1 root root      7081 Dec 13 06:13 init_data.xml
[2025-12-13 09:32:21] -rw-r--r-- 2 root root 189732232 Dec 13 06:13 EVNT.47886829._000066.pool.root.1
[2025-12-13 09:32:21] -rw-r--r-- 2 root root     15847 Dec 13 06:13 start_atlas.sh
[2025-12-13 09:32:21] drwxrwx--x 2 root root      4096 Dec 13 06:13 shared
[2025-12-13 09:32:21] -rw-r--r-- 2 root root    592406 Dec 13 06:13 input.tar.gz
[2025-12-13 09:32:21] -rw-r--r-- 1 root root         0 Dec 13 06:13 boinc_lockfile
[2025-12-13 09:32:21] -rw-r--r-- 1 root root      2535 Dec 13 06:13 pandaJob.out
[2025-12-13 09:32:21] -rw------- 1 root root    991736 Dec 13 06:13 agis_schedconf.cvmfs.json
[2025-12-13 09:32:21] drwxr-xr-x 5  320  320      4096 Dec 13 06:13 pilot3
[2025-12-13 09:32:21] -rw------- 1 root root 145089036 Dec 13 09:31 HITS.47886831._001649.pool.root.1
[2025-12-13 09:32:21] -rw-r--r-- 1 root root       531 Dec 13 09:31 boinc_task_state.xml
[2025-12-13 09:32:21] -rw------- 1 root root      1042 Dec 13 09:31 memory_monitor_summary.json
[2025-12-13 09:32:21] -rw------- 1 root root   1516240 Dec 13 09:31 agis_ddmendpoints.agis.ALL.json
[2025-12-13 09:32:21] -rw------- 1 root root    476210 Dec 13 09:31 log.47886831._001649.job.log.tgz.1
[2025-12-13 09:32:21] -rw------- 1 root root      7782 Dec 13 09:31 heartbeat.json
[2025-12-13 09:32:21] -rw-r--r-- 1 root root        28 Dec 13 09:32 wrapper_checkpoint.txt
[2025-12-13 09:32:21] -rw------- 1 root root       893 Dec 13 09:32 pilotlog.txt
[2025-12-13 09:32:21] -rw------- 1 root root        95 Dec 13 09:32 pilot_heartbeat.json
[2025-12-13 09:32:21] -rw------- 1 root root   1702982 Dec 13 09:32 log.47886831._001649.job.log.1
[2025-12-13 09:32:21] -rw-r--r-- 1 root root      8192 Dec 13 09:32 boinc_mmap_file
[2025-12-13 09:32:21] -rw------- 1 root root       357 Dec 13 09:32 output.list
[2025-12-13 09:32:21] -rw-r--r-- 1 root root       620 Dec 13 09:32 runtime_log
[2025-12-13 09:32:21] -rw------- 1 root root   2201600 Dec 13 09:32 result.tar.gz
[2025-12-13 09:32:21] -rw-r--r-- 1 root root      9021 Dec 13 09:32 runtime_log.err
[2025-12-13 09:32:21] -rw------- 1 root root       657 Dec 13 09:32 0tCLDmjxTo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkQRKDmwNt4Xn.diag
[2025-12-13 09:32:21] -rw-r--r-- 1 root root     21210 Dec 13 09:32 stderr.txt
[2025-12-13 09:32:21] HITS file was successfully produced:
[2025-12-13 09:32:21] -rw------- 1 root root 145089036 Dec 13 09:31 shared/HITS.pool.root.1
[2025-12-13 09:32:21]  *** Contents of shared directory: ***
[2025-12-13 09:32:21] total 329736
[2025-12-13 09:32:21] -rw-r--r-- 2 root root 189732232 Dec 13 06:13 ATLAS.root_0
[2025-12-13 09:32:21] -rw-r--r-- 2 root root     15847 Dec 13 06:13 start_atlas.sh
[2025-12-13 09:32:21] -rw-r--r-- 2 root root    592406 Dec 13 06:13 input.tar.gz
[2025-12-13 09:32:21] -rw------- 1 root root 145089036 Dec 13 09:31 HITS.pool.root.1
[2025-12-13 09:32:21] -rw------- 1 root root   2201600 Dec 13 09:32 result.tar.gz
09:32:22 (3605245): run_atlas exited; CPU time 24215.257423
09:32:22 (3605245): called boinc_finish(0)

</stderr_txt>
]]>

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