Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
05:37:51 (3531538): wrapper (7.7.26015): starting
05:37:51 (3531538): wrapper: running run_atlas (--nthreads 10)
[2025-12-13 05:37:51] Arguments: --nthreads 10
[2025-12-13 05:37:51] Threads: 10
[2025-12-13 05:37:51] Checking for CVMFS
[2025-12-13 05:37:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 05:37:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 05:37:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 05:37:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 05:37:51] 2.13.3.0 11319 9993 72604 153962 3 188 3696952 4096000 11922 130560 0 1519955436 99.999 1046067 531 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-13 05:37:51] CVMFS is ok
[2025-12-13 05:37:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 05:37:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-13 05:37:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-13 05:37:51] Further information can be found at the LHC@home message board.
[2025-12-13 05:37:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 05:37:51] Checking for apptainer binary...
[2025-12-13 05:37:51] apptainer is not installed, using version from CVMFS
[2025-12-13 05:37:51] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 05:37:51] 7950x-linux
[2025-12-13 05:37:51] apptainer works
[2025-12-13 05:37:51] Set ATHENA_PROC_NUMBER=10
[2025-12-13 05:37:51] Set ATHENA_CORE_NUMBER=10
[2025-12-13 05:37:51] Starting ATLAS job with PandaID=6928824065
[2025-12-13 05:37:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc505/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 08:42:29]  *** The last 200 lines of the pilot log: ***
[2025-12-13 08:42:29] 2025-12-13 16:41:29,625 | INFO     | time since job start (11005s) is within the limit (174528.0s)
[2025-12-13 08:42:29] 2025-12-13 16:41:29,866 | INFO     | monitor loop #827: job 0:6928824065 is in state 'finished'
[2025-12-13 08:42:29] 2025-12-13 16:41:29,866 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 08:42:29] 2025-12-13 16:41:31,630 | INFO     | time since job start (11007s) is within the limit (174528.0s)
[2025-12-13 08:42:29] 2025-12-13 16:41:32,372 | INFO     | monitor loop #828: job 0:6928824065 is in state 'finished'
[2025-12-13 08:42:29] 2025-12-13 16:41:32,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 08:42:29] 2025-12-13 16:41:33,635 | INFO     | time since job start (11009s) is within the limit (174528.0s)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,424 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 08:42:29] 2025-12-13 16:41:34,427 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3999.9945312500013
[2025-12-13 08:42:29] 2025-12-13 16:41:34,430 | INFO     | using path: /var/lib/multiboinc/boinc505/slots/4/PanDA_Pilot-6928824065/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,431 | INFO     | extracted standard info from prmon json
[2025-12-13 08:42:29] 2025-12-13 16:41:34,431 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 08:42:29] 2025-12-13 16:41:34,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 08:42:29] 2025-12-13 16:41:34,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 08:42:29] 2025-12-13 16:41:34,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 08:42:29] 2025-12-13 16:41:34,433 | INFO     | fitting pss+swap vs Time
[2025-12-13 08:42:29] 2025-12-13 16:41:34,433 | INFO     | sum of square deviations: 1778377530.0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,434 | INFO     | sum of deviations: 17835314749.0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,434 | INFO     | mean x: 1765638542.0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,434 | INFO     | mean y: 2539900.122905028
[2025-12-13 08:42:29] 2025-12-13 16:41:34,434 | INFO     | intersect: -17705015778.18993
[2025-12-13 08:42:29] 2025-12-13 16:41:34,434 | INFO     | chi2: 1.1593717780574353
[2025-12-13 08:42:29] 2025-12-13 16:41:34,434 | INFO     | sum of square deviations: 1633472487.5
[2025-12-13 08:42:29] 2025-12-13 16:41:34,435 | INFO     | sum of deviations: 17229035749.000015
[2025-12-13 08:42:29] 2025-12-13 16:41:34,435 | INFO     | mean x: 1765638389.5
[2025-12-13 08:42:29] 2025-12-13 16:41:34,435 | INFO     | mean y: 2539261.896551724
[2025-12-13 08:42:29] 2025-12-13 16:41:34,435 | INFO     | intersect: -18620515099.465816
[2025-12-13 08:42:29] 2025-12-13 16:41:34,435 | INFO     | chi2: 1.160159923336029
[2025-12-13 08:42:29] 2025-12-13 16:41:34,435 | INFO     | current chi2=1.160159923336029 (change=-0.06798037467447873 %)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,435 | INFO     | right removable region: 173
[2025-12-13 08:42:29] 2025-12-13 16:41:34,435 | INFO     | sum of square deviations: 1633472487.5
[2025-12-13 08:42:29] 2025-12-13 16:41:34,436 | INFO     | sum of deviations: -3213026129.5000005
[2025-12-13 08:42:29] 2025-12-13 16:41:34,436 | INFO     | mean x: 1765638694.5
[2025-12-13 08:42:29] 2025-12-13 16:41:34,436 | INFO     | mean y: 2561686.695402299
[2025-12-13 08:42:29] 2025-12-13 16:41:34,436 | INFO     | intersect: 3475557592.103799
[2025-12-13 08:42:29] 2025-12-13 16:41:34,436 | INFO     | chi2: 0.006872773861285109
[2025-12-13 08:42:29] 2025-12-13 16:41:34,436 | INFO     | current chi2=0.006872773861285109 (change=99.40719845080233 %)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,436 | INFO     | sum of square deviations: 1496660620.0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | sum of deviations: -3152960130.9999995
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | mean x: 1765638847.0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | mean y: 2561615.674556213
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | intersect: 3722168329.4102383
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | chi2: 0.0067594086042575465
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | current chi2=0.0067594086042575465 (change=1.6494832991109734 %)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | left removable region: 20
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | sum of square deviations: 1110539892.0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | sum of deviations: -1841302140.9999995
[2025-12-13 08:42:29] 2025-12-13 16:41:34,437 | INFO     | mean x: 1765638969.0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | mean y: 2559840.529411765
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | intersect: 2930032178.32881
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | chi2: 0.006111365329084604
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | current memory leak: -1.66 B/s (using 153 data points, chi2=0.01)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | could have reported an average CPU frequency of 3999 MHz (10 samples)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | ..............................
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | . Timing measurements:
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | . get job = 0 s
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | . initial setup = 3 s
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | . payload setup = 6 s
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | . stage-in = 0 s
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | . payload execution = 10899 s
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | . stage-out = 74 s
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | . log creation = 0 s
[2025-12-13 08:42:29] 2025-12-13 16:41:34,438 | INFO     | ..............................
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | 
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | job summary report
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | --------------------------------------------------
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | PanDA job id: 6928824065
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | task id: 47886831
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | errors: (none)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | pilot state: finished 
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | transexitcode: 0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | exeerrorcode: 0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | exeerrordiag: 
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | exitcode: 0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | exitmsg: OK
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | cpuconsumptiontime: 23428 s
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | nevents: 400
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | neventsw: 0
[2025-12-13 08:42:29] 2025-12-13 16:41:34,534 | INFO     | pid: 3542032
[2025-12-13 08:42:29] 2025-12-13 16:41:34,535 | INFO     | pgrp: 3542032
[2025-12-13 08:42:29] 2025-12-13 16:41:34,535 | INFO     | corecount: 10
[2025-12-13 08:42:29] 2025-12-13 16:41:34,535 | INFO     | event service: False
[2025-12-13 08:42:29] 2025-12-13 16:41:34,535 | INFO     | sizes: {0: 2284000, 1: 2284000, 6: 2284290, 11: 2284318, 10909: 2313608, 10910: 2313607, 10985: 2322873, 10994: 2323011}
[2025-12-13 08:42:29] 2025-12-13 16:41:34,535 | INFO     | --------------------------------------------------
[2025-12-13 08:42:29] 2025-12-13 16:41:34,535 | INFO     | 
[2025-12-13 08:42:29] 2025-12-13 16:41:34,535 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc505/slots/4
[2025-12-13 08:42:29] 2025-12-13 16:41:34,554 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 08:42:29] 2025-12-13 16:41:34,555 | INFO     | job 6928824065 has completed (purged errors)
[2025-12-13 08:42:29] 2025-12-13 16:41:34,556 | INFO     | overall cleanup function is called
[2025-12-13 08:42:29] 2025-12-13 16:41:35,268 | INFO     | PID=3535370 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 08:42:29] 2025-12-13 16:41:35,268 | INFO     | .. there are 18 such processes running
[2025-12-13 08:42:29] 2025-12-13 16:41:35,562 | INFO     | --- collectZombieJob: --- 10, [3542032]
[2025-12-13 08:42:29] 2025-12-13 16:41:35,562 | INFO     | zombie collector waiting for pid 3542032
[2025-12-13 08:42:29] 2025-12-13 16:41:35,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 08:42:29] 2025-12-13 16:41:35,563 | INFO     | collected zombie processes
[2025-12-13 08:42:29] 2025-12-13 16:41:35,563 | INFO     | will attempt to kill all subprocesses of pid=3542032
[2025-12-13 08:42:29] 2025-12-13 16:41:36,000 | INFO     | process IDs to be killed: [3542032] (in reverse order)
[2025-12-13 08:42:29] 2025-12-13 16:41:36,126 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 08:42:29] 2025-12-13 16:41:36,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 08:42:29] 2025-12-13 16:41:36,132 | INFO     | did not find any defunct processes belonging to 3542032
[2025-12-13 08:42:29] 2025-12-13 16:41:36,137 | INFO     | did not find any defunct processes belonging to 3542032
[2025-12-13 08:42:29] 2025-12-13 16:41:36,137 | INFO     | ready for new job
[2025-12-13 08:42:29] 2025-12-13 16:41:36,137 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 08:42:29] 2025-12-13 16:41:36,138 | INFO     | ***************************************
[2025-12-13 08:42:29] 2025-12-13 16:41:36,138 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 08:42:29] 2025-12-13 16:41:36,138 | INFO     | ***************************************
[2025-12-13 08:42:29] 2025-12-13 16:41:36,138 | INFO     | 
[2025-12-13 08:42:29] 2025-12-13 16:41:36,139 | INFO     | architecture information:
[2025-12-13 08:42:29] 2025-12-13 16:41:36,139 | INFO     | executing command: cat /etc/os-release
[2025-12-13 08:42:29] 2025-12-13 16:41:36,152 | INFO     | cat /etc/os-release:
[2025-12-13 08:42:29] NAME="CentOS Linux"
[2025-12-13 08:42:29] VERSION="7 (Core)"
[2025-12-13 08:42:29] ID="centos"
[2025-12-13 08:42:29] ID_LIKE="rhel fedora"
[2025-12-13 08:42:29] VERSION_ID="7"
[2025-12-13 08:42:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 08:42:29] ANSI_COLOR="0;31"
[2025-12-13 08:42:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 08:42:29] HOME_URL="https://www.centos.org/"
[2025-12-13 08:42:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 08:42:29] 
[2025-12-13 08:42:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 08:42:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 08:42:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 08:42:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 08:42:29] 
[2025-12-13 08:42:29] 2025-12-13 16:41:36,152 | INFO     | ***************************************
[2025-12-13 08:42:29] 2025-12-13 16:41:36,655 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc505/slots/4
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | INFO     | sufficient remaining disk space (208260825088 B)
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | INFO     | update_server=False
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 08:42:29] 2025-12-13 16:41:36,676 | INFO     | aborting loop
[2025-12-13 08:42:29] 2025-12-13 16:41:37,090 | INFO     | all data control threads have been joined
[2025-12-13 08:42:29] 2025-12-13 16:41:37,259 | INFO     | all job control threads have been joined
[2025-12-13 08:42:29] 2025-12-13 16:41:37,563 | INFO     | all payload control threads have been joined
[2025-12-13 08:42:29] 2025-12-13 16:41:37,681 | INFO     | [job] retrieve thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:37,681 | INFO     | [job] job monitor thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:37,808 | INFO     | [payload] validate_post thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,089 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,091 | INFO     | [job] validate thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,097 | INFO     | [data] control thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,181 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,264 | INFO     | [job] control thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,325 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,568 | INFO     | [payload] control thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,681 | INFO     | [data] copytool_out thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:38,841 | INFO     | [payload] failed_post thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:39,036 | INFO     | [data] copytool_in thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:39,144 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:39,544 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 08:42:29] 2025-12-13 16:41:40,549 | INFO     | [job] queue monitor thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:41:40,685 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 08:42:29] 2025-12-13 16:42:07,587 | INFO     | PID=3535370 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 08:42:29] 2025-12-13 16:42:07,587 | INFO     | .. there are 17 such processes running
[2025-12-13 08:42:29] 2025-12-13 16:42:07,587 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 08:42:29] 2025-12-13 16:42:07,587 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 08:42:29] 2025-12-13 16:42:07,587 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 08:42:29] 2025-12-13 16:42:22,453 | INFO     | [monitor] cgroup control has ended
[2025-12-13 08:42:29] 2025-12-13 16:42:24,413 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 128412609230656)>', '<ExcThread(monitor, started 128412123387648)>']
[2025-12-13 08:42:29] 2025-12-13 16:42:24,674 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 08:42:29] 2025-12-13 16:42:24,674 | INFO     | [monitor] control thread has ended
[2025-12-13 08:42:29] 2025-12-13 16:42:29,441 | INFO     | all workflow threads have been joined
[2025-12-13 08:42:29] 2025-12-13 16:42:29,441 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 08:42:29] 2025-12-13 16:42:29,441 | INFO     | traces error code: 0
[2025-12-13 08:42:29] 2025-12-13 16:42:29,441 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 08:42:29] 2025-12-13 16:42:29,546 [wrapper] ==== pilot stdout END ====
[2025-12-13 08:42:29] 2025-12-13 16:42:29,548 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 08:42:29] 2025-12-13 16:42:29,550 [wrapper] pilotpid: 3535370
[2025-12-13 08:42:29] 2025-12-13 16:42:29,551 [wrapper] Pilot exit status: 0
[2025-12-13 08:42:29] 2025-12-13 16:42:29,572 [wrapper] pandaids: 6928824065
[2025-12-13 08:42:29] 2025-12-13 16:42:29,622 [wrapper] cleanup supervisor_pilot 4001266 3535371
[2025-12-13 08:42:29] 2025-12-13 16:42:29,628 [wrapper] Test setup, not cleaning
[2025-12-13 08:42:29] 2025-12-13 16:42:29,630 [wrapper] apfmon messages muted
[2025-12-13 08:42:29] 2025-12-13 16:42:29,634 [wrapper] ==== wrapper stdout END ====
[2025-12-13 08:42:29] 2025-12-13 16:42:29,636 [wrapper] ==== wrapper stderr END ====
[2025-12-13 08:42:29]  *** Error codes and diagnostics ***
[2025-12-13 08:42:29]     "exeErrorCode": 0,
[2025-12-13 08:42:29]     "exeErrorDiag": "",
[2025-12-13 08:42:29]     "pilotErrorCode": 0,
[2025-12-13 08:42:29]     "pilotErrorDiag": "",
[2025-12-13 08:42:29]  *** Listing of results directory ***
[2025-12-13 08:42:29] total 337904
[2025-12-13 08:42:29] -rw-r--r-- 1 root root    579449 Dec 12 17:46 pilot3.tar.gz
[2025-12-13 08:42:29] -rwx------ 1 4871 1028     36322 Dec 12 17:50 runpilot2-wrapper.sh
[2025-12-13 08:42:29] -rw-r--r-- 1 root root      5112 Dec 12 17:51 queuedata.json
[2025-12-13 08:42:29] -rw-r--r-- 1 root root       100 Dec 13 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 08:42:29] -rwxr-xr-x 1 root root      7986 Dec 13 05:37 run_atlas
[2025-12-13 08:42:29] -rw-r--r-- 1 root root       105 Dec 13 05:37 job.xml
[2025-12-13 08:42:29] -rw-r--r-- 2 root root 192407423 Dec 13 05:37 EVNT.47886829._000065.pool.root.1
[2025-12-13 08:42:29] -rw-r--r-- 2 root root     15847 Dec 13 05:37 start_atlas.sh
[2025-12-13 08:42:29] drwxrwx--x 2 root root      4096 Dec 13 05:37 shared
[2025-12-13 08:42:29] -rw-r--r-- 2 root root    592409 Dec 13 05:37 input.tar.gz
[2025-12-13 08:42:29] -rw-r--r-- 1 root root         0 Dec 13 05:37 boinc_lockfile
[2025-12-13 08:42:29] -rw-r--r-- 1 root root      2535 Dec 13 05:37 pandaJob.out
[2025-12-13 08:42:29] -rw------- 1 root root    991736 Dec 13 05:38 agis_schedconf.cvmfs.json
[2025-12-13 08:42:29] drwxr-xr-x 5  320  320      4096 Dec 13 05:38 pilot3
[2025-12-13 08:42:29] -rw-r--r-- 1 root root      7087 Dec 13 06:02 init_data.xml
[2025-12-13 08:42:29] -rw------- 1 root root 145611067 Dec 13 08:39 HITS.47886831._001613.pool.root.1
[2025-12-13 08:42:29] -rw-r--r-- 1 root root       531 Dec 13 08:39 boinc_task_state.xml
[2025-12-13 08:42:29] -rw------- 1 root root      1038 Dec 13 08:40 memory_monitor_summary.json
[2025-12-13 08:42:29] -rw------- 1 root root        95 Dec 13 08:41 pilot_heartbeat.json
[2025-12-13 08:42:29] -rw------- 1 root root   1516240 Dec 13 08:41 agis_ddmendpoints.agis.ALL.json
[2025-12-13 08:42:29] -rw------- 1 root root    452439 Dec 13 08:41 log.47886831._001613.job.log.tgz.1
[2025-12-13 08:42:29] -rw------- 1 root root      7768 Dec 13 08:41 heartbeat.json
[2025-12-13 08:42:29] -rw-r--r-- 1 root root      8192 Dec 13 08:42 boinc_mmap_file
[2025-12-13 08:42:29] -rw-r--r-- 1 root root        28 Dec 13 08:42 wrapper_checkpoint.txt
[2025-12-13 08:42:29] -rw------- 1 root root      4839 Dec 13 08:42 pilotlog.txt
[2025-12-13 08:42:29] -rw------- 1 root root   1584789 Dec 13 08:42 log.47886831._001613.job.log.1
[2025-12-13 08:42:29] -rw------- 1 root root       357 Dec 13 08:42 output.list
[2025-12-13 08:42:29] -rw-r--r-- 1 root root       620 Dec 13 08:42 runtime_log
[2025-12-13 08:42:29] -rw------- 1 root root   2058240 Dec 13 08:42 result.tar.gz
[2025-12-13 08:42:29] -rw-r--r-- 1 root root      9021 Dec 13 08:42 runtime_log.err
[2025-12-13 08:42:29] -rw------- 1 root root       656 Dec 13 08:42 HNDODmTxTo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCNRKDmoQ5Dom.diag
[2025-12-13 08:42:29] -rw-r--r-- 1 root root     21570 Dec 13 08:42 stderr.txt
[2025-12-13 08:42:29] HITS file was successfully produced:
[2025-12-13 08:42:29] -rw------- 1 root root 145611067 Dec 13 08:39 shared/HITS.pool.root.1
[2025-12-13 08:42:29]  *** Contents of shared directory: ***
[2025-12-13 08:42:29] total 332716
[2025-12-13 08:42:29] -rw-r--r-- 2 root root 192407423 Dec 13 05:37 ATLAS.root_0
[2025-12-13 08:42:29] -rw-r--r-- 2 root root     15847 Dec 13 05:37 start_atlas.sh
[2025-12-13 08:42:29] -rw-r--r-- 2 root root    592409 Dec 13 05:37 input.tar.gz
[2025-12-13 08:42:29] -rw------- 1 root root 145611067 Dec 13 08:39 HITS.pool.root.1
[2025-12-13 08:42:29] -rw------- 1 root root   2058240 Dec 13 08:42 result.tar.gz
08:42:31 (3531538): run_atlas exited; CPU time 23582.740463
08:42:31 (3531538): called boinc_finish(0)

</stderr_txt>
]]>

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