Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:57:29 (2943623): wrapper (7.7.26015): starting
20:57:29 (2943623): wrapper: running run_atlas (--nthreads 12)
[2025-12-12 20:57:29] Arguments: --nthreads 12
[2025-12-12 20:57:29] Threads: 12
[2025-12-12 20:57:29] Checking for CVMFS
[2025-12-12 20:57:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 20:57:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 20:57:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 20:57:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 20:57:32] 2.13.2.0 5582 56751 203624 153943 0 90 20044174 39288832 8782 16776704 0 46451972 99.643 46156248 37767 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-12 20:57:32] CVMFS is ok
[2025-12-12 20:57:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 20:57:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 20:57:32] Further information can be found at the LHC@home message board.
[2025-12-12 20:57:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 20:57:32] Checking for apptainer binary...
[2025-12-12 20:57:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 20:57:32] Running /usr/bin/apptainer --version
[2025-12-12 20:57:33] apptainer version 1.4.4-1.el9
[2025-12-12 20:57:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 20:57:34] c-210-22.aglt2.org
[2025-12-12 20:57:34] apptainer works
[2025-12-12 20:57:34] Set ATHENA_PROC_NUMBER=12
[2025-12-12 20:57:34] Set ATHENA_CORE_NUMBER=12
[2025-12-12 20:57:34] Starting ATLAS job with PandaID=6928824150
[2025-12-12 20:57:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 04:23:19]  *** The last 200 lines of the pilot log: ***
[2025-12-13 04:23:20] 2025-12-13 09:22:34,435 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.899875
[2025-12-13 04:23:20] 2025-12-13 09:22:34,538 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6928824150/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 04:23:20] 2025-12-13 09:22:34,539 | INFO     | extracted standard info from prmon json
[2025-12-13 04:23:20] 2025-12-13 09:22:34,540 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 04:23:20] 2025-12-13 09:22:34,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 04:23:20] 2025-12-13 09:22:34,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 04:23:20] 2025-12-13 09:22:34,540 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 04:23:20] 2025-12-13 09:22:34,624 | INFO     | fitting pss+swap vs Time
[2025-12-13 04:23:20] 2025-12-13 09:22:34,660 | INFO     | sum of square deviations: 25358589330.61965
[2025-12-13 04:23:20] 2025-12-13 09:22:34,708 | INFO     | sum of deviations: -201618771942.11517
[2025-12-13 04:23:20] 2025-12-13 09:22:34,708 | INFO     | mean x: 1765604433.246544
[2025-12-13 04:23:20] 2025-12-13 09:22:34,708 | INFO     | mean y: 2604398.589861751
[2025-12-13 04:23:20] 2025-12-13 09:22:34,708 | INFO     | intersect: 14040411980.295113
[2025-12-13 04:23:20] 2025-12-13 09:22:34,709 | INFO     | chi2: 9.216875515117671
[2025-12-13 04:23:20] 2025-12-13 09:22:34,710 | INFO     | sum of square deviations: 24492970822.83912
[2025-12-13 04:23:20] 2025-12-13 09:22:34,783 | INFO     | sum of deviations: -42162644320.68529
[2025-12-13 04:23:20] 2025-12-13 09:22:34,783 | INFO     | mean x: 1765604280.7832167
[2025-12-13 04:23:20] 2025-12-13 09:22:34,784 | INFO     | mean y: 2632485.627039627
[2025-12-13 04:23:20] 2025-12-13 09:22:34,784 | INFO     | intersect: 3041975725.7833624
[2025-12-13 04:23:20] 2025-12-13 09:22:34,784 | INFO     | chi2: 4.649282429922699
[2025-12-13 04:23:20] 2025-12-13 09:22:34,785 | INFO     | current chi2=4.649282429922699 (change=49.556849039602746 %)
[2025-12-13 04:23:20] 2025-12-13 09:22:34,785 | INFO     | sum of square deviations: 23646682504.41516
[2025-12-13 04:23:20] 2025-12-13 09:22:34,810 | INFO     | sum of deviations: 51227428351.264175
[2025-12-13 04:23:20] 2025-12-13 09:22:34,838 | INFO     | mean x: 1765604128.2641509
[2025-12-13 04:23:20] 2025-12-13 09:22:34,838 | INFO     | mean y: 2649242.7476415094
[2025-12-13 04:23:20] 2025-12-13 09:22:34,838 | INFO     | intersect: -3822299942.427077
[2025-12-13 04:23:20] 2025-12-13 09:22:34,839 | INFO     | chi2: 2.1483568500124144
[2025-12-13 04:23:20] 2025-12-13 09:22:34,839 | INFO     | current chi2=2.1483568500124144 (change=53.79164672411321 %)
[2025-12-13 04:23:20] 2025-12-13 09:22:34,840 | INFO     | sum of square deviations: 22819881853.885147
[2025-12-13 04:23:20] 2025-12-13 09:22:34,870 | INFO     | sum of deviations: 50781474347.26249
[2025-12-13 04:23:20] 2025-12-13 09:22:34,871 | INFO     | mean x: 1765603975.7231503
[2025-12-13 04:23:20] 2025-12-13 09:22:34,871 | INFO     | mean y: 2649160.4677804294
[2025-12-13 04:23:20] 2025-12-13 09:22:34,871 | INFO     | intersect: -3926379638.8353567
[2025-12-13 04:23:20] 2025-12-13 09:22:34,897 | INFO     | chi2: 2.1488261408574343
[2025-12-13 04:23:20] 2025-12-13 09:22:34,897 | INFO     | current chi2=2.1488261408574343 (change=-0.021844175701871256 %)
[2025-12-13 04:23:20] 2025-12-13 09:22:34,897 | INFO     | right removable region: 418
[2025-12-13 04:23:20] 2025-12-13 09:22:34,898 | INFO     | sum of square deviations: 24492058487.118885
[2025-12-13 04:23:20] 2025-12-13 09:22:34,938 | INFO     | sum of deviations: -292112301361.06287
[2025-12-13 04:23:20] 2025-12-13 09:22:34,938 | INFO     | mean x: 1765604585.7902098
[2025-12-13 04:23:20] 2025-12-13 09:22:34,938 | INFO     | mean y: 2620266.365967366
[2025-12-13 04:23:20] 2025-12-13 09:22:34,938 | INFO     | intersect: 21060663187.506115
[2025-12-13 04:23:20] 2025-12-13 09:22:34,939 | INFO     | chi2: 7.3512241527222875
[2025-12-13 04:23:20] 2025-12-13 09:22:34,968 | INFO     | current chi2=7.3512241527222875 (change=20.241689923394446 %)
[2025-12-13 04:23:20] 2025-12-13 09:22:34,968 | INFO     | left removable region: 10
[2025-12-13 04:23:20] 2025-12-13 09:22:34,968 | INFO     | sum of square deviations: 21069281948.703506
[2025-12-13 04:23:20] 2025-12-13 09:22:34,999 | INFO     | sum of deviations: -42484822717.612686
[2025-12-13 04:23:20] 2025-12-13 09:22:34,999 | INFO     | mean x: 1765604250.3063726
[2025-12-13 04:23:20] 2025-12-13 09:22:35,000 | INFO     | mean y: 2666767.004901961
[2025-12-13 04:23:20] 2025-12-13 09:22:35,000 | INFO     | intersect: 3562891730.83408
[2025-12-13 04:23:20] 2025-12-13 09:22:35,000 | INFO     | chi2: 0.1343632497996737
[2025-12-13 04:23:20] 2025-12-13 09:22:35,001 | INFO     | current memory leak: -2.02 B/s (using 408 data points, chi2=0.13)
[2025-12-13 04:23:20] 2025-12-13 09:22:35,025 | INFO     | could have reported an average CPU frequency of 2599 MHz (18 samples)
[2025-12-13 04:23:20] 2025-12-13 09:22:35,025 | INFO     | ..............................
[2025-12-13 04:23:20] 2025-12-13 09:22:35,025 | INFO     | . Timing measurements:
[2025-12-13 04:23:20] 2025-12-13 09:22:35,025 | INFO     | . get job = 0 s
[2025-12-13 04:23:20] 2025-12-13 09:22:35,025 | INFO     | . initial setup = 4 s
[2025-12-13 04:23:20] 2025-12-13 09:22:35,025 | INFO     | . payload setup = 41 s
[2025-12-13 04:23:20] 2025-12-13 09:22:35,026 | INFO     | . stage-in = 0 s
[2025-12-13 04:23:20] 2025-12-13 09:22:35,026 | INFO     | . payload execution = 26469 s
[2025-12-13 04:23:20] 2025-12-13 09:22:35,026 | INFO     | . stage-out = 13 s
[2025-12-13 04:23:20] 2025-12-13 09:22:35,026 | INFO     | . log creation = 3 s
[2025-12-13 04:23:20] 2025-12-13 09:22:35,026 | INFO     | ..............................
[2025-12-13 04:23:20] 2025-12-13 09:22:35,080 | INFO     | time since job start (26659s) is within the limit (174528.0s)
[2025-12-13 04:23:20] 2025-12-13 09:22:35,461 | INFO     | 
[2025-12-13 04:23:20] 2025-12-13 09:22:35,484 | INFO     | job summary report
[2025-12-13 04:23:20] 2025-12-13 09:22:35,484 | INFO     | --------------------------------------------------
[2025-12-13 04:23:20] 2025-12-13 09:22:35,484 | INFO     | PanDA job id: 6928824150
[2025-12-13 04:23:20] 2025-12-13 09:22:35,484 | INFO     | task id: 47886831
[2025-12-13 04:23:20] 2025-12-13 09:22:35,484 | INFO     | errors: (none)
[2025-12-13 04:23:20] 2025-12-13 09:22:35,484 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 04:23:20] 2025-12-13 09:22:35,484 | INFO     | pilot state: finished 
[2025-12-13 04:23:20] 2025-12-13 09:22:35,484 | INFO     | transexitcode: 0
[2025-12-13 04:23:20] 2025-12-13 09:22:35,485 | INFO     | exeerrorcode: 0
[2025-12-13 04:23:20] 2025-12-13 09:22:35,485 | INFO     | exeerrordiag: 
[2025-12-13 04:23:20] 2025-12-13 09:22:35,485 | INFO     | exitcode: 0
[2025-12-13 04:23:20] 2025-12-13 09:22:35,485 | INFO     | exitmsg: OK
[2025-12-13 04:23:20] 2025-12-13 09:22:35,485 | INFO     | cpuconsumptiontime: 56196 s
[2025-12-13 04:23:20] 2025-12-13 09:22:35,485 | INFO     | nevents: 400
[2025-12-13 04:23:20] 2025-12-13 09:22:35,485 | INFO     | neventsw: 0
[2025-12-13 04:23:20] 2025-12-13 09:22:35,485 | INFO     | pid: 2955690
[2025-12-13 04:23:20] 2025-12-13 09:22:35,486 | INFO     | pgrp: 2955690
[2025-12-13 04:23:20] 2025-12-13 09:22:35,486 | INFO     | corecount: 12
[2025-12-13 04:23:20] 2025-12-13 09:22:35,486 | INFO     | event service: False
[2025-12-13 04:23:20] 2025-12-13 09:22:35,486 | INFO     | sizes: {0: 2283158, 1: 2283843, 2: 2284014, 3: 2284070, 14: 2284070, 25: 2264103, 26: 2284516, 36: 2284544, 26519: 2320500, 26521: 2320499, 26536: 2329553, 26537: 
[2025-12-13 04:23:20] 2025-12-13 09:22:35,486 | INFO     | --------------------------------------------------
[2025-12-13 04:23:20] 2025-12-13 09:22:35,486 | INFO     | 
[2025-12-13 04:23:20] 2025-12-13 09:22:35,486 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 04:23:20] 2025-12-13 09:22:35,944 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,965 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,965 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,965 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,965 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,965 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,965 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,965 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,966 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,966 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,966 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,966 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,966 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,966 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,966 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,966 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,967 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,967 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 04:23:20] 2025-12-13 09:22:35,967 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,967 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 04:23:20] 2025-12-13 09:22:35,967 | INFO     | job 6928824150 has completed (purged errors)
[2025-12-13 04:23:20] 2025-12-13 09:22:35,968 | INFO     | overall cleanup function is called
[2025-12-13 04:23:20] 2025-12-13 09:22:37,610 | INFO     | PID=2947886 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 04:23:20] 2025-12-13 09:22:37,610 | INFO     | .. there are 9 such processes running
[2025-12-13 04:23:20] 2025-12-13 09:22:37,660 | INFO     | --- collectZombieJob: --- 10, [2955690]
[2025-12-13 04:23:20] 2025-12-13 09:22:37,661 | INFO     | zombie collector waiting for pid 2955690
[2025-12-13 04:23:20] 2025-12-13 09:22:37,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 04:23:20] 2025-12-13 09:22:37,661 | INFO     | collected zombie processes
[2025-12-13 04:23:20] 2025-12-13 09:22:37,661 | INFO     | will attempt to kill all subprocesses of pid=2955690
[2025-12-13 04:23:20] 2025-12-13 09:22:38,414 | INFO     | process IDs to be killed: [2955690] (in reverse order)
[2025-12-13 04:23:20] 2025-12-13 09:22:38,710 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 04:23:20] 2025-12-13 09:22:38,711 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 04:23:20] 2025-12-13 09:22:38,800 | INFO     | did not find any defunct processes belonging to 2955690
[2025-12-13 04:23:20] 2025-12-13 09:22:38,826 | INFO     | did not find any defunct processes belonging to 2955690
[2025-12-13 04:23:20] 2025-12-13 09:22:38,827 | INFO     | ready for new job
[2025-12-13 04:23:20] 2025-12-13 09:22:38,827 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 04:23:20] 2025-12-13 09:22:38,848 | INFO     | ***************************************
[2025-12-13 04:23:20] 2025-12-13 09:22:38,848 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 04:23:20] 2025-12-13 09:22:38,848 | INFO     | ***************************************
[2025-12-13 04:23:20] 2025-12-13 09:22:38,848 | INFO     | 
[2025-12-13 04:23:20] 2025-12-13 09:22:38,908 | INFO     | architecture information:
[2025-12-13 04:23:20] 2025-12-13 09:22:38,908 | INFO     | executing command: cat /etc/os-release
[2025-12-13 04:23:20] 2025-12-13 09:22:38,950 | INFO     | cat /etc/os-release:
[2025-12-13 04:23:20] NAME="CentOS Linux"
[2025-12-13 04:23:20] VERSION="7 (Core)"
[2025-12-13 04:23:20] ID="centos"
[2025-12-13 04:23:20] ID_LIKE="rhel fedora"
[2025-12-13 04:23:20] VERSION_ID="7"
[2025-12-13 04:23:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 04:23:20] ANSI_COLOR="0;31"
[2025-12-13 04:23:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 04:23:20] HOME_URL="https://www.centos.org/"
[2025-12-13 04:23:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 04:23:20] 
[2025-12-13 04:23:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 04:23:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 04:23:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 04:23:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 04:23:20] 
[2025-12-13 04:23:20] 2025-12-13 09:22:38,950 | INFO     | ***************************************
[2025-12-13 04:23:20] 2025-12-13 09:22:39,469 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 04:23:20] 2025-12-13 09:22:39,597 | INFO     | sufficient remaining disk space (52618592256 B)
[2025-12-13 04:23:20] 2025-12-13 09:22:39,598 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 04:23:20] 2025-12-13 09:22:39,598 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 04:23:20] 2025-12-13 09:22:39,598 | INFO     | update_server=False
[2025-12-13 04:23:20] 2025-12-13 09:22:39,598 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 04:23:20] 2025-12-13 09:22:39,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 04:23:20] 2025-12-13 09:22:39,697 | INFO     | aborting loop
[2025-12-13 04:23:20] 2025-12-13 09:22:40,159 | INFO     | all data control threads have been joined
[2025-12-13 04:23:20] 2025-12-13 09:22:40,451 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 04:23:20] 2025-12-13 09:22:40,462 | INFO     | all payload control threads have been joined
[2025-12-13 04:23:20] 2025-12-13 09:22:40,605 | INFO     | [job] retrieve thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:40,697 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:40,712 | INFO     | [job] job monitor thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:40,759 | INFO     | [job] validate thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:40,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 04:23:20] 2025-12-13 09:22:40,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 04:23:20] 2025-12-13 09:22:40,971 | INFO     | all job control threads have been joined
[2025-12-13 04:23:20] 2025-12-13 09:22:41,081 | INFO     | [payload] validate_post thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,091 | INFO     | [payload] failed_post thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,168 | INFO     | [data] control thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,468 | INFO     | [payload] control thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,804 | INFO     | [job] queue monitor thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,817 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,827 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,832 | INFO     | [data] copytool_in thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,844 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:41,977 | INFO     | [job] control thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:42,921 | INFO     | [data] copytool_out thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:22:44,462 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 04:23:20] 2025-12-13 09:23:10,326 | INFO     | [monitor] cgroup control has ended
[2025-12-13 04:23:20] 2025-12-13 09:23:12,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140127705302848)>', '<ExcThread(monitor, started 140126973839104)>']
[2025-12-13 04:23:20] 2025-12-13 09:23:13,286 | INFO     | PID=2947886 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 04:23:20] 2025-12-13 09:23:13,286 | INFO     | .. there are 9 such processes running
[2025-12-13 04:23:20] 2025-12-13 09:23:13,287 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 04:23:20] 2025-12-13 09:23:13,287 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 04:23:20] 2025-12-13 09:23:13,287 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 04:23:20] 2025-12-13 09:23:13,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 04:23:20] 2025-12-13 09:23:13,287 | INFO     | [monitor] control thread has ended
[2025-12-13 04:23:20] 2025-12-13 09:23:17,123 | INFO     | all workflow threads have been joined
[2025-12-13 04:23:20] 2025-12-13 09:23:17,124 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 04:23:20] 2025-12-13 09:23:17,124 | INFO     | traces error code: 0
[2025-12-13 04:23:20] 2025-12-13 09:23:17,124 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 04:23:20] 2025-12-13 09:23:17,941 [wrapper] ==== pilot stdout END ====
[2025-12-13 04:23:20] 2025-12-13 09:23:17,981 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 04:23:20] 2025-12-13 09:23:17,984 [wrapper] pilotpid: 2947886
[2025-12-13 04:23:20] 2025-12-13 09:23:17,987 [wrapper] Pilot exit status: 0
[2025-12-13 04:23:20] 2025-12-13 09:23:18,091 [wrapper] pandaids: 6928824150
[2025-12-13 04:23:20] 2025-12-13 09:23:18,186 [wrapper] cleanup supervisor_pilot 3546014 2947887
[2025-12-13 04:23:20] 2025-12-13 09:23:18,255 [wrapper] Test setup, not cleaning
[2025-12-13 04:23:20] 2025-12-13 09:23:18,288 [wrapper] apfmon messages muted
[2025-12-13 04:23:20] 2025-12-13 09:23:18,306 [wrapper] ==== wrapper stdout END ====
[2025-12-13 04:23:20] 2025-12-13 09:23:18,324 [wrapper] ==== wrapper stderr END ====
[2025-12-13 04:23:20]  *** Error codes and diagnostics ***
[2025-12-13 04:23:20]     "exeErrorCode": 0,
[2025-12-13 04:23:20]     "exeErrorDiag": "",
[2025-12-13 04:23:20]     "pilotErrorCode": 0,
[2025-12-13 04:23:20]     "pilotErrorDiag": "",
[2025-12-13 04:23:20]  *** Listing of results directory ***
[2025-12-13 04:23:20] total 343652
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas    579449 Dec 12 20:46 pilot3.tar.gz
[2025-12-13 04:23:20] -rwx------. 1 boincer umatlas     36322 Dec 12 20:50 runpilot2-wrapper.sh
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas      5112 Dec 12 20:51 queuedata.json
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas       100 Dec 12 20:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 04:23:20] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 12 20:57 run_atlas
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas       105 Dec 12 20:57 job.xml
[2025-12-13 04:23:20] -rw-r--r--. 2 boincer umatlas 192155648 Dec 12 20:57 EVNT.47886829._000068.pool.root.1
[2025-12-13 04:23:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 12 20:57 start_atlas.sh
[2025-12-13 04:23:20] drwxrwx--x. 2 boincer umatlas      4096 Dec 12 20:57 shared
[2025-12-13 04:23:20] -rw-r--r--. 2 boincer umatlas    592413 Dec 12 20:57 input.tar.gz
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas         0 Dec 12 20:57 boinc_lockfile
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas      2535 Dec 12 20:57 pandaJob.out
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas        57 Dec 12 20:57 setup.sh.local
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas    991720 Dec 12 20:58 agis_schedconf.cvmfs.json
[2025-12-13 04:23:20] drwx------. 5 boincer umatlas      4096 Dec 12 20:58 pilot3
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas 148332403 Dec 13 04:12 HITS.47886831._001698.pool.root.1
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas       531 Dec 13 04:12 boinc_task_state.xml
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas      6662 Dec 13 04:19 init_data.xml
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas      1056 Dec 13 04:21 memory_monitor_summary.json
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas   1516240 Dec 13 04:21 agis_ddmendpoints.agis.ALL.json
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas    665190 Dec 13 04:21 log.47886831._001698.job.log.tgz.1
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas        95 Dec 13 04:22 pilot_heartbeat.json
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas      7829 Dec 13 04:22 heartbeat.json
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas        28 Dec 13 04:22 wrapper_checkpoint.txt
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas      4823 Dec 13 04:23 pilotlog.txt
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas   3079190 Dec 13 04:23 log.47886831._001698.job.log.1
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 04:23 boinc_mmap_file
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas       357 Dec 13 04:23 output.list
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas       620 Dec 13 04:23 runtime_log
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas   3768320 Dec 13 04:23 result.tar.gz
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas      9345 Dec 13 04:23 runtime_log.err
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas       657 Dec 13 04:23 6ZwNDmixTo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHaNKDmbDURLm.diag
[2025-12-13 04:23:20] -rw-r--r--. 1 boincer umatlas     21334 Dec 13 04:23 stderr.txt
[2025-12-13 04:23:20] HITS file was successfully produced:
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas 148332403 Dec 13 04:12 shared/HITS.pool.root.1
[2025-12-13 04:23:20]  *** Contents of shared directory: ***
[2025-12-13 04:23:20] total 336792
[2025-12-13 04:23:20] -rw-r--r--. 2 boincer umatlas 192155648 Dec 12 20:57 ATLAS.root_0
[2025-12-13 04:23:20] -rw-r--r--. 2 boincer umatlas     15847 Dec 12 20:57 start_atlas.sh
[2025-12-13 04:23:20] -rw-r--r--. 2 boincer umatlas    592413 Dec 12 20:57 input.tar.gz
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas 148332403 Dec 13 04:12 HITS.pool.root.1
[2025-12-13 04:23:20] -rw-------. 1 boincer umatlas   3768320 Dec 13 04:23 result.tar.gz
04:23:22 (2943623): run_atlas exited; CPU time 56580.531152
04:23:22 (2943623): called boinc_finish(0)

</stderr_txt>
]]>

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