Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:47:13 (28396): wrapper (7.7.26015): starting
20:47:13 (28396): wrapper: running run_atlas (--nthreads 8)
[2025-12-12 20:47:13] Arguments: --nthreads 8
[2025-12-12 20:47:13] Threads: 8
[2025-12-12 20:47:13] Checking for CVMFS
[2025-12-12 20:47:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 20:47:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 20:47:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 20:47:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 20:47:14] 2.11.2.0 26356 131420 134592 153943 2 1 9718790 18432000 1 130560 0 95308603 99.976 5524677 23449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-12 20:47:14] CVMFS is ok
[2025-12-12 20:47:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 20:47:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 20:47:14] Further information can be found at the LHC@home message board.
[2025-12-12 20:47:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 20:47:14] Checking for apptainer binary...
[2025-12-12 20:47:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 20:47:14] Running /usr/bin/apptainer --version
[2025-12-12 20:47:14] apptainer version 1.3.2-1.el7
[2025-12-12 20:47:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 20:47:15] c-206-6.aglt2.org
[2025-12-12 20:47:15] apptainer works
[2025-12-12 20:47:15] Set ATHENA_PROC_NUMBER=8
[2025-12-12 20:47:15] Set ATHENA_CORE_NUMBER=8
[2025-12-12 20:47:15] Starting ATLAS job with PandaID=6928822328
[2025-12-12 20:47:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 00:09:57]  *** The last 200 lines of the pilot log: ***
[2025-12-13 00:09:57] 2025-12-13 05:09:02,046 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 00:09:57] 2025-12-13 05:09:02,050 | INFO     | fitting pss+swap vs Time
[2025-12-13 00:09:57] 2025-12-13 05:09:02,050 | INFO     | sum of square deviations: 2406926989.5
[2025-12-13 00:09:57] 2025-12-13 05:09:02,051 | INFO     | sum of deviations: 22588146127.499992
[2025-12-13 00:09:57] 2025-12-13 05:09:02,051 | INFO     | mean x: 1765596487.5
[2025-12-13 00:09:57] 2025-12-13 05:09:02,052 | INFO     | sufficient remaining disk space (28196208640 B)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,052 | INFO     | mean y: 2454918.47979798
[2025-12-13 00:09:57] 2025-12-13 05:09:02,052 | INFO     | intersect: -16567034574.068316
[2025-12-13 00:09:57] 2025-12-13 05:09:02,052 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,052 | INFO     | chi2: 1.3814401744210447
[2025-12-13 00:09:57] 2025-12-13 05:09:02,053 | INFO     | sum of square deviations: 2229146912.0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,054 | INFO     | sum of deviations: 21849417613.999996
[2025-12-13 00:09:57] 2025-12-13 05:09:02,054 | INFO     | mean x: 1765596335.0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,054 | INFO     | mean y: 2454285.0932642487
[2025-12-13 00:09:57] 2025-12-13 05:09:02,054 | INFO     | intersect: -17303382065.796307
[2025-12-13 00:09:57] 2025-12-13 05:09:02,055 | INFO     | chi2: 1.3823353433490615
[2025-12-13 00:09:57] 2025-12-13 05:09:02,055 | INFO     | current chi2=1.3823353433490615 (change=-0.06479968836811463 %)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,055 | INFO     | right removable region: 192
[2025-12-13 00:09:57] 2025-12-13 05:09:02,055 | INFO     | sum of square deviations: 2229146912.0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,056 | INFO     | sum of deviations: -5762622846.999999
[2025-12-13 00:09:57] 2025-12-13 05:09:02,056 | INFO     | mean x: 1765596640.0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,056 | INFO     | mean y: 2478956.559585492
[2025-12-13 00:09:57] 2025-12-13 05:09:02,057 | INFO     | intersect: 4566766523.915053
[2025-12-13 00:09:57] 2025-12-13 05:09:02,057 | INFO     | chi2: 0.025960831804427122
[2025-12-13 00:09:57] 2025-12-13 05:09:02,057 | INFO     | current chi2=0.025960831804427122 (change=98.12074150693445 %)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,057 | INFO     | sum of square deviations: 2060343747.0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,058 | INFO     | sum of deviations: -5659209394.5
[2025-12-13 00:09:57] 2025-12-13 05:09:02,058 | INFO     | mean x: 1765596792.5
[2025-12-13 00:09:57] 2025-12-13 05:09:02,059 | INFO     | mean y: 2478833.3776595746
[2025-12-13 00:09:57] 2025-12-13 05:09:02,059 | INFO     | intersect: 4852097723.217729
[2025-12-13 00:09:57] 2025-12-13 05:09:02,059 | INFO     | chi2: 0.015820092632463468
[2025-12-13 00:09:57] 2025-12-13 05:09:02,059 | INFO     | current chi2=0.015820092632463468 (change=39.06168819380566 %)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,059 | INFO     | sum of square deviations: 1900284932.0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,060 | INFO     | sum of deviations: -4053335075.9999967
[2025-12-13 00:09:57] 2025-12-13 05:09:02,061 | INFO     | mean x: 1765596945.0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,061 | INFO     | mean y: 2477299.7978142076
[2025-12-13 00:09:57] 2025-12-13 05:09:02,061 | INFO     | intersect: 3768520963.426115
[2025-12-13 00:09:57] 2025-12-13 05:09:02,061 | INFO     | chi2: 0.014311059881400186
[2025-12-13 00:09:57] 2025-12-13 05:09:02,061 | INFO     | current chi2=0.014311059881400186 (change=9.538709956518748 %)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,061 | INFO     | left removable region: 30
[2025-12-13 00:09:57] 2025-12-13 05:09:02,062 | INFO     | sum of square deviations: 1318277740.5
[2025-12-13 00:09:57] 2025-12-13 05:09:02,062 | INFO     | sum of deviations: 2000776210.0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,062 | INFO     | mean x: 1765597219.5
[2025-12-13 00:09:57] 2025-12-13 05:09:02,063 | INFO     | mean y: 2470270.7901234566
[2025-12-13 00:09:57] 2025-12-13 05:09:02,063 | INFO     | intersect: -2677211563.083448
[2025-12-13 00:09:57] 2025-12-13 05:09:02,063 | INFO     | chi2: 9.92953804636628e-05
[2025-12-13 00:09:57] 2025-12-13 05:09:02,063 | INFO     | current memory leak: 1.52 B/s (using 162 data points, chi2=0.00)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,064 | INFO     | could have reported an average CPU frequency of 2330 MHz (10 samples)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,064 | INFO     | ..............................
[2025-12-13 00:09:57] 2025-12-13 05:09:02,064 | INFO     | . Timing measurements:
[2025-12-13 00:09:57] 2025-12-13 05:09:02,064 | INFO     | . get job = 0 s
[2025-12-13 00:09:57] 2025-12-13 05:09:02,064 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6928822328: 3207476 B (within 2768240640 B limit)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,064 | INFO     | . initial setup = 2 s
[2025-12-13 00:09:57] 2025-12-13 05:09:02,064 | INFO     | . payload setup = 6 s
[2025-12-13 00:09:57] 2025-12-13 05:09:02,065 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6928822328/HITS.47886831._000977.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,065 | INFO     | . stage-in = 0 s
[2025-12-13 00:09:57] 2025-12-13 05:09:02,065 | INFO     | total size of present files: 0 B (workdir size: 3207476 B)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,065 | INFO     | . payload execution = 12058 s
[2025-12-13 00:09:57] 2025-12-13 05:09:02,065 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6928822328/HITS.47886831._000977.pool.root.1 since it does not exist
[2025-12-13 00:09:57] 2025-12-13 05:09:02,065 | INFO     | . stage-out = 1 s
[2025-12-13 00:09:57] 2025-12-13 05:09:02,065 | INFO     | . log creation = 0 s
[2025-12-13 00:09:57] 2025-12-13 05:09:02,066 | INFO     | ..............................
[2025-12-13 00:09:57] 2025-12-13 05:09:02,246 | INFO     | number of running child processes to parent process 15537: 1
[2025-12-13 00:09:57] 2025-12-13 05:09:02,246 | INFO     | maximum number of monitored processes: 6
[2025-12-13 00:09:57] 2025-12-13 05:09:02,246 | INFO     | aborting job monitoring since job object (job id=6928822328) has expired
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | 
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | job summary report
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | --------------------------------------------------
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | PanDA job id: 6928822328
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | task id: 47886831
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | errors: (none)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | pilot state: finished 
[2025-12-13 00:09:57] 2025-12-13 05:09:02,486 | INFO     | transexitcode: 0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | exeerrorcode: 0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | exeerrordiag: 
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | exitcode: 0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | exitmsg: OK
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | cpuconsumptiontime: 92652 s
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | nevents: 400
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | neventsw: 0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | pid: 15537
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | pgrp: 15537
[2025-12-13 00:09:57] 2025-12-13 05:09:02,487 | INFO     | corecount: 8
[2025-12-13 00:09:57] 2025-12-13 05:09:02,488 | INFO     | event service: False
[2025-12-13 00:09:57] 2025-12-13 05:09:02,488 | INFO     | sizes: {0: 2283809, 1: 2284008, 5: 2284270, 12: 2284326, 12068: 2313718, 12069: 2313717, 12070: 2322955, 12075: 2323121}
[2025-12-13 00:09:57] 2025-12-13 05:09:02,488 | INFO     | --------------------------------------------------
[2025-12-13 00:09:57] 2025-12-13 05:09:02,488 | INFO     | 
[2025-12-13 00:09:57] 2025-12-13 05:09:02,488 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 00:09:57] 2025-12-13 05:09:02,501 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,501 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,502 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 00:09:57] 2025-12-13 05:09:02,503 | INFO     | job 6928822328 has completed (purged errors)
[2025-12-13 00:09:57] 2025-12-13 05:09:02,504 | INFO     | overall cleanup function is called
[2025-12-13 00:09:57] 2025-12-13 05:09:03,511 | INFO     | --- collectZombieJob: --- 10, [15537]
[2025-12-13 00:09:57] 2025-12-13 05:09:03,511 | INFO     | zombie collector waiting for pid 15537
[2025-12-13 00:09:57] 2025-12-13 05:09:03,511 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 00:09:57] 2025-12-13 05:09:03,511 | INFO     | collected zombie processes
[2025-12-13 00:09:57] 2025-12-13 05:09:03,511 | INFO     | will attempt to kill all subprocesses of pid=15537
[2025-12-13 00:09:57] 2025-12-13 05:09:03,619 | INFO     | process IDs to be killed: [15537] (in reverse order)
[2025-12-13 00:09:57] 2025-12-13 05:09:03,662 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 00:09:57] 2025-12-13 05:09:03,662 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 00:09:57] 2025-12-13 05:09:03,665 | INFO     | did not find any defunct processes belonging to 15537
[2025-12-13 00:09:57] 2025-12-13 05:09:03,667 | INFO     | did not find any defunct processes belonging to 15537
[2025-12-13 00:09:57] 2025-12-13 05:09:03,667 | INFO     | ready for new job
[2025-12-13 00:09:57] 2025-12-13 05:09:03,667 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 00:09:57] 2025-12-13 05:09:03,669 | INFO     | ***************************************
[2025-12-13 00:09:57] 2025-12-13 05:09:03,669 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 00:09:57] 2025-12-13 05:09:03,669 | INFO     | ***************************************
[2025-12-13 00:09:57] 2025-12-13 05:09:03,669 | INFO     | 
[2025-12-13 00:09:57] 2025-12-13 05:09:03,670 | INFO     | architecture information:
[2025-12-13 00:09:57] 2025-12-13 05:09:03,671 | INFO     | executing command: cat /etc/os-release
[2025-12-13 00:09:57] 2025-12-13 05:09:03,681 | INFO     | cat /etc/os-release:
[2025-12-13 00:09:57] NAME="CentOS Linux"
[2025-12-13 00:09:57] VERSION="7 (Core)"
[2025-12-13 00:09:57] ID="centos"
[2025-12-13 00:09:57] ID_LIKE="rhel fedora"
[2025-12-13 00:09:57] VERSION_ID="7"
[2025-12-13 00:09:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 00:09:57] ANSI_COLOR="0;31"
[2025-12-13 00:09:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 00:09:57] HOME_URL="https://www.centos.org/"
[2025-12-13 00:09:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 00:09:57] 
[2025-12-13 00:09:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 00:09:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 00:09:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 00:09:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 00:09:57] 
[2025-12-13 00:09:57] 2025-12-13 05:09:03,681 | INFO     | ***************************************
[2025-12-13 00:09:57] 2025-12-13 05:09:04,184 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 00:09:57] 2025-12-13 05:09:04,196 | INFO     | sufficient remaining disk space (28200402944 B)
[2025-12-13 00:09:57] 2025-12-13 05:09:04,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 00:09:57] 2025-12-13 05:09:04,196 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 00:09:57] 2025-12-13 05:09:04,196 | INFO     | update_server=False
[2025-12-13 00:09:57] 2025-12-13 05:09:04,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 00:09:57] 2025-12-13 05:09:04,196 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 00:09:57] 2025-12-13 05:09:04,197 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 00:09:57] 2025-12-13 05:09:04,197 | INFO     | aborting loop
[2025-12-13 00:09:57] 2025-12-13 05:09:04,457 | INFO     | all job control threads have been joined
[2025-12-13 00:09:57] 2025-12-13 05:09:04,559 | INFO     | all data control threads have been joined
[2025-12-13 00:09:57] 2025-12-13 05:09:04,814 | INFO     | all payload control threads have been joined
[2025-12-13 00:09:57] 2025-12-13 05:09:05,201 | INFO     | [job] job monitor thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:05,202 | INFO     | [job] retrieve thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:05,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 00:09:57] 2025-12-13 05:09:05,408 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:05,462 | INFO     | [job] control thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:05,565 | INFO     | [data] control thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:05,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:05,819 | INFO     | [payload] control thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:06,002 | INFO     | [data] copytool_in thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:06,034 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:06,078 | INFO     | [payload] validate_post thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:06,404 | INFO     | [job] validate thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:06,420 | INFO     | [payload] failed_post thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:06,441 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:07,152 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 00:09:57] 2025-12-13 05:09:07,334 | INFO     | [data] copytool_out thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:08,157 | INFO     | [job] queue monitor thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:08,203 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 00:09:57] 2025-12-13 05:09:34,338 | INFO     | PID=1913 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 00:09:57] 2025-12-13 05:09:34,338 | INFO     | .. there are 2 such processes running
[2025-12-13 00:09:57] 2025-12-13 05:09:34,338 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 00:09:57] 2025-12-13 05:09:34,338 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 00:09:57] 2025-12-13 05:09:34,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 00:09:57] 2025-12-13 05:09:50,642 | INFO     | [monitor] cgroup control has ended
[2025-12-13 00:09:57] 2025-12-13 05:09:52,248 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140505454487360)>', '<ExcThread(monitor, started 140504889030400)>']
[2025-12-13 00:09:57] 2025-12-13 05:09:52,415 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 00:09:57] 2025-12-13 05:09:52,415 | INFO     | [monitor] control thread has ended
[2025-12-13 00:09:57] 2025-12-13 05:09:57,253 | INFO     | all workflow threads have been joined
[2025-12-13 00:09:57] 2025-12-13 05:09:57,253 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 00:09:57] 2025-12-13 05:09:57,253 | INFO     | traces error code: 0
[2025-12-13 00:09:57] 2025-12-13 05:09:57,253 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 00:09:57] 2025-12-13 05:09:57,339 [wrapper] ==== pilot stdout END ====
[2025-12-13 00:09:57] 2025-12-13 05:09:57,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 00:09:57] 2025-12-13 05:09:57,344 [wrapper] pilotpid: 1913
[2025-12-13 00:09:57] 2025-12-13 05:09:57,346 [wrapper] Pilot exit status: 0
[2025-12-13 00:09:57] 2025-12-13 05:09:57,353 [wrapper] pandaids: 6928822328
[2025-12-13 00:09:57] 2025-12-13 05:09:57,381 [wrapper] cleanup supervisor_pilot  8364 1914
[2025-12-13 00:09:57] 2025-12-13 05:09:57,383 [wrapper] Test setup, not cleaning
[2025-12-13 00:09:57] 2025-12-13 05:09:57,386 [wrapper] apfmon messages muted
[2025-12-13 00:09:57] 2025-12-13 05:09:57,388 [wrapper] ==== wrapper stdout END ====
[2025-12-13 00:09:57] 2025-12-13 05:09:57,390 [wrapper] ==== wrapper stderr END ====
[2025-12-13 00:09:57]  *** Error codes and diagnostics ***
[2025-12-13 00:09:57]     "exeErrorCode": 0,
[2025-12-13 00:09:57]     "exeErrorDiag": "",
[2025-12-13 00:09:57]     "pilotErrorCode": 0,
[2025-12-13 00:09:57]     "pilotErrorDiag": "",
[2025-12-13 00:09:57]  *** Listing of results directory ***
[2025-12-13 00:09:57] total 346048
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas    579449 Dec 12 20:46 pilot3.tar.gz
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas      5112 Dec 12 20:46 queuedata.json
[2025-12-13 00:09:57] -rwx------ 1 boincer umatlas     36322 Dec 12 20:46 runpilot2-wrapper.sh
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas       100 Dec 12 20:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 00:09:57] -rwxr-xr-x 1 boincer umatlas      7986 Dec 12 20:47 run_atlas
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas       105 Dec 12 20:47 job.xml
[2025-12-13 00:09:57] -rw-r--r-- 2 boincer umatlas 193658998 Dec 12 20:47 EVNT.47886829._000040.pool.root.1
[2025-12-13 00:09:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 12 20:47 start_atlas.sh
[2025-12-13 00:09:57] drwxrwx--x 2 boincer umatlas      4096 Dec 12 20:47 shared
[2025-12-13 00:09:57] -rw-r--r-- 2 boincer umatlas    592402 Dec 12 20:47 input.tar.gz
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas         0 Dec 12 20:47 boinc_lockfile
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas      2532 Dec 12 20:47 pandaJob.out
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas        57 Dec 12 20:47 setup.sh.local
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas    991720 Dec 12 20:47 agis_schedconf.cvmfs.json
[2025-12-13 00:09:57] drwx------ 5 boincer umatlas      4096 Dec 12 20:47 pilot3
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas      5952 Dec 13 00:03 init_data.xml
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas 152566542 Dec 13 00:08 HITS.47886831._000977.pool.root.1
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas       530 Dec 13 00:08 boinc_task_state.xml
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas        95 Dec 13 00:08 pilot_heartbeat.json
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas      1048 Dec 13 00:08 memory_monitor_summary.json
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas   1516240 Dec 13 00:08 agis_ddmendpoints.agis.ALL.json
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas    417667 Dec 13 00:08 log.47886831._000977.job.log.tgz.1
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas      7842 Dec 13 00:09 heartbeat.json
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas      8192 Dec 13 00:09 boinc_mmap_file
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas        28 Dec 13 00:09 wrapper_checkpoint.txt
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas      4820 Dec 13 00:09 pilotlog.txt
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas   1687287 Dec 13 00:09 log.47886831._000977.job.log.1
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas       357 Dec 13 00:09 output.list
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas       620 Dec 13 00:09 runtime_log
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas   2119680 Dec 13 00:09 result.tar.gz
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas      9338 Dec 13 00:09 runtime_log.err
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas       661 Dec 13 00:09 N1dNDmTtTo8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkTNKDmVibFsm.diag
[2025-12-13 00:09:57] -rw-r--r-- 1 boincer umatlas     21349 Dec 13 00:09 stderr.txt
[2025-12-13 00:09:57] HITS file was successfully produced:
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas 152566542 Dec 13 00:08 shared/HITS.pool.root.1
[2025-12-13 00:09:57]  *** Contents of shared directory: ***
[2025-12-13 00:09:57] total 340792
[2025-12-13 00:09:57] -rw-r--r-- 2 boincer umatlas 193658998 Dec 12 20:47 ATLAS.root_0
[2025-12-13 00:09:57] -rw-r--r-- 2 boincer umatlas     15847 Dec 12 20:47 start_atlas.sh
[2025-12-13 00:09:57] -rw-r--r-- 2 boincer umatlas    592402 Dec 12 20:47 input.tar.gz
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas 152566542 Dec 13 00:08 HITS.pool.root.1
[2025-12-13 00:09:57] -rw------- 1 boincer umatlas   2119680 Dec 13 00:09 result.tar.gz
00:09:58 (28396): run_atlas exited; CPU time 92809.429928
00:09:58 (28396): called boinc_finish(0)

</stderr_txt>
]]>

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