Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:59:26 (32438): wrapper (7.7.26015): starting
19:59:26 (32438): wrapper: running run_atlas (--nthreads 8)
[2025-12-12 19:59:26] Arguments: --nthreads 8
[2025-12-12 19:59:26] Threads: 8
[2025-12-12 19:59:26] Checking for CVMFS
[2025-12-12 19:59:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 19:59:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 19:59:26] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 19:59:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 19:59:27] 2.11.2.0 2797 89505 84924 153942 0 1 11621823 20275200 1 130560 0 22312797 99.847 5170196 31771 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-12 19:59:27] CVMFS is ok
[2025-12-12 19:59:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 19:59:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 19:59:27] Further information can be found at the LHC@home message board.
[2025-12-12 19:59:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 19:59:27] Checking for apptainer binary...
[2025-12-12 19:59:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 19:59:27] Running /usr/bin/apptainer --version
[2025-12-12 19:59:27] apptainer version 1.3.2-1.el7
[2025-12-12 19:59:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 19:59:28] c-204-11.aglt2.org
[2025-12-12 19:59:28] apptainer works
[2025-12-12 19:59:28] Set ATHENA_PROC_NUMBER=8
[2025-12-12 19:59:28] Set ATHENA_CORE_NUMBER=8
[2025-12-12 19:59:28] Starting ATLAS job with PandaID=6928799344
[2025-12-12 19:59:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 22:13:06]  *** The last 200 lines of the pilot log: ***
[2025-12-12 22:13:06] 2025-12-13 03:12:25,627 | INFO     | intersect: -28147472260.1073
[2025-12-12 22:13:06] 2025-12-13 03:12:25,628 | INFO     | chi2: 1.4805202908835222
[2025-12-12 22:13:06] 2025-12-13 03:12:25,628 | INFO     | sum of square deviations: 605592750.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,629 | INFO     | sum of deviations: 10404759446.999998
[2025-12-12 22:13:06] 2025-12-13 03:12:25,629 | INFO     | mean x: 1765591402.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,629 | INFO     | mean y: 2460173.976
[2025-12-12 22:13:06] 2025-12-13 03:12:25,629 | INFO     | intersect: -30332370980.29636
[2025-12-12 22:13:06] 2025-12-13 03:12:25,629 | INFO     | chi2: 1.482762520280851
[2025-12-12 22:13:06] 2025-12-13 03:12:25,630 | INFO     | current chi2=1.482762520280851 (change=-0.15144874481866658 %)
[2025-12-12 22:13:06] 2025-12-13 03:12:25,630 | INFO     | right removable region: 124
[2025-12-12 22:13:06] 2025-12-13 03:12:25,630 | INFO     | sum of square deviations: 605592750.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,631 | INFO     | sum of deviations: -7301525113.000001
[2025-12-12 22:13:06] 2025-12-13 03:12:25,631 | INFO     | mean x: 1765591707.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,631 | INFO     | mean y: 2497021.192
[2025-12-12 22:13:06] 2025-12-13 03:12:25,631 | INFO     | intersect: 21289925227.63113
[2025-12-12 22:13:06] 2025-12-13 03:12:25,631 | INFO     | chi2: 0.08232788064762324
[2025-12-12 22:13:06] 2025-12-13 03:12:25,632 | INFO     | current chi2=0.08232788064762324 (change=94.43926022800451 %)
[2025-12-12 22:13:06] 2025-12-13 03:12:25,632 | INFO     | sum of square deviations: 535786790.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,632 | INFO     | sum of deviations: -4388135009.5
[2025-12-12 22:13:06] 2025-12-13 03:12:25,633 | INFO     | mean x: 1765591859.5
[2025-12-12 22:13:06] 2025-12-13 03:12:25,633 | INFO     | mean y: 2490566.275
[2025-12-12 22:13:06] 2025-12-13 03:12:25,633 | INFO     | intersect: 14462823661.01247
[2025-12-12 22:13:06] 2025-12-13 03:12:25,633 | INFO     | chi2: 0.060998303642127105
[2025-12-12 22:13:06] 2025-12-13 03:12:25,633 | INFO     | current chi2=0.060998303642127105 (change=25.908084646063223 %)
[2025-12-12 22:13:06] 2025-12-13 03:12:25,633 | INFO     | sum of square deviations: 471562330.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,634 | INFO     | sum of deviations: 266770446.00000024
[2025-12-12 22:13:06] 2025-12-13 03:12:25,634 | INFO     | mean x: 1765592012.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,634 | INFO     | mean y: 2479498.513043478
[2025-12-12 22:13:06] 2025-12-13 03:12:25,634 | INFO     | intersect: -996344492.5705482
[2025-12-12 22:13:06] 2025-12-13 03:12:25,635 | INFO     | chi2: 0.013607732543589046
[2025-12-12 22:13:06] 2025-12-13 03:12:25,635 | INFO     | current chi2=0.013607732543589046 (change=77.69162135487457 %)
[2025-12-12 22:13:06] 2025-12-13 03:12:25,635 | INFO     | sum of square deviations: 412686807.5
[2025-12-12 22:13:06] 2025-12-13 03:12:25,635 | INFO     | sum of deviations: 1032259415.5000001
[2025-12-12 22:13:06] 2025-12-13 03:12:25,636 | INFO     | mean x: 1765592164.5
[2025-12-12 22:13:06] 2025-12-13 03:12:25,636 | INFO     | mean y: 2477607.536363636
[2025-12-12 22:13:06] 2025-12-13 03:12:25,636 | INFO     | intersect: -4413823332.100894
[2025-12-12 22:13:06] 2025-12-13 03:12:25,636 | INFO     | chi2: 8.304528271930327e-05
[2025-12-12 22:13:06] 2025-12-13 03:12:25,636 | INFO     | current chi2=8.304528271930327e-05 (change=99.38971990775622 %)
[2025-12-12 22:13:06] 2025-12-13 03:12:25,636 | INFO     | sum of square deviations: 358927660.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,637 | INFO     | sum of deviations: 829714008.9999999
[2025-12-12 22:13:06] 2025-12-13 03:12:25,637 | INFO     | mean x: 1765592317.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,637 | INFO     | mean y: 2478182.0285714287
[2025-12-12 22:13:06] 2025-12-13 03:12:25,637 | INFO     | intersect: -4078947806.7003794
[2025-12-12 22:13:06] 2025-12-13 03:12:25,638 | INFO     | chi2: 6.681901769963845e-05
[2025-12-12 22:13:06] 2025-12-13 03:12:25,638 | INFO     | current chi2=6.681901769963845e-05 (change=19.5390568715508 %)
[2025-12-12 22:13:06] 2025-12-13 03:12:25,638 | INFO     | left removable region: 50
[2025-12-12 22:13:06] 2025-12-13 03:12:25,638 | INFO     | sum of square deviations: 125630262.5
[2025-12-12 22:13:06] 2025-12-13 03:12:25,638 | INFO     | sum of deviations: 226436087.0
[2025-12-12 22:13:06] 2025-12-13 03:12:25,639 | INFO     | mean x: 1765592896.5
[2025-12-12 22:13:06] 2025-12-13 03:12:25,639 | INFO     | mean y: 2479904.1621621624
[2025-12-12 22:13:06] 2025-12-13 03:12:25,639 | INFO     | intersect: -3179826164.1584067
[2025-12-12 22:13:06] 2025-12-13 03:12:25,639 | INFO     | chi2: 4.604082383793902e-05
[2025-12-12 22:13:06] 2025-12-13 03:12:25,639 | INFO     | current memory leak: 1.80 B/s (using 74 data points, chi2=0.00)
[2025-12-12 22:13:06] 2025-12-13 03:12:25,640 | INFO     | could have reported an average CPU frequency of 1987 MHz (8 samples)
[2025-12-12 22:13:06] 2025-12-13 03:12:25,640 | INFO     | ..............................
[2025-12-12 22:13:06] 2025-12-13 03:12:25,640 | INFO     | . Timing measurements:
[2025-12-12 22:13:06] 2025-12-13 03:12:25,640 | INFO     | . get job = 0 s
[2025-12-12 22:13:06] 2025-12-13 03:12:25,640 | INFO     | . initial setup = 2 s
[2025-12-12 22:13:06] 2025-12-13 03:12:25,640 | INFO     | . payload setup = 8 s
[2025-12-12 22:13:06] 2025-12-13 03:12:25,640 | INFO     | . stage-in = 0 s
[2025-12-12 22:13:06] 2025-12-13 03:12:25,640 | INFO     | . payload execution = 7915 s
[2025-12-12 22:13:06] 2025-12-13 03:12:25,641 | INFO     | . stage-out = 0 s
[2025-12-12 22:13:06] 2025-12-13 03:12:25,641 | INFO     | . log creation = 0 s
[2025-12-12 22:13:06] 2025-12-13 03:12:25,641 | INFO     | ..............................
[2025-12-12 22:13:06] 2025-12-13 03:12:26,075 | INFO     | 
[2025-12-12 22:13:06] 2025-12-13 03:12:26,075 | INFO     | job summary report
[2025-12-12 22:13:06] 2025-12-13 03:12:26,075 | INFO     | --------------------------------------------------
[2025-12-12 22:13:06] 2025-12-13 03:12:26,076 | INFO     | PanDA job id: 6928799344
[2025-12-12 22:13:06] 2025-12-13 03:12:26,076 | INFO     | task id: 47886831
[2025-12-12 22:13:06] 2025-12-13 03:12:26,076 | INFO     | errors: (none)
[2025-12-12 22:13:06] 2025-12-13 03:12:26,076 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 22:13:06] 2025-12-13 03:12:26,076 | INFO     | pilot state: finished 
[2025-12-12 22:13:06] 2025-12-13 03:12:26,077 | INFO     | transexitcode: 0
[2025-12-12 22:13:06] 2025-12-13 03:12:26,077 | INFO     | exeerrorcode: 0
[2025-12-12 22:13:06] 2025-12-13 03:12:26,077 | INFO     | exeerrordiag: 
[2025-12-12 22:13:06] 2025-12-13 03:12:26,077 | INFO     | exitcode: 0
[2025-12-12 22:13:06] 2025-12-13 03:12:26,077 | INFO     | exitmsg: OK
[2025-12-12 22:13:06] 2025-12-13 03:12:26,077 | INFO     | cpuconsumptiontime: 59657 s
[2025-12-12 22:13:06] 2025-12-13 03:12:26,078 | INFO     | nevents: 400
[2025-12-12 22:13:06] 2025-12-13 03:12:26,078 | INFO     | neventsw: 0
[2025-12-12 22:13:06] 2025-12-13 03:12:26,078 | INFO     | pid: 10763
[2025-12-12 22:13:06] 2025-12-13 03:12:26,078 | INFO     | pgrp: 10763
[2025-12-12 22:13:06] 2025-12-13 03:12:26,078 | INFO     | corecount: 8
[2025-12-12 22:13:06] 2025-12-13 03:12:26,078 | INFO     | event service: False
[2025-12-12 22:13:06] 2025-12-13 03:12:26,079 | INFO     | sizes: {0: 2283982, 6: 2284244, 11: 2284272, 7927: 2311917, 7929: 2320915, 7933: 2320971, 7940: 2321293}
[2025-12-12 22:13:06] 2025-12-13 03:12:26,079 | INFO     | --------------------------------------------------
[2025-12-12 22:13:06] 2025-12-13 03:12:26,079 | INFO     | 
[2025-12-12 22:13:06] 2025-12-13 03:12:26,079 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-12 22:13:06] 2025-12-13 03:12:26,107 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,108 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,108 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,108 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,108 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,108 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,109 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,109 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,109 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,109 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,109 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,109 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,111 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 22:13:06] 2025-12-13 03:12:26,111 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,111 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 22:13:06] 2025-12-13 03:12:26,111 | INFO     | job 6928799344 has completed (purged errors)
[2025-12-12 22:13:06] 2025-12-13 03:12:26,111 | INFO     | overall cleanup function is called
[2025-12-12 22:13:06] 2025-12-13 03:12:27,120 | INFO     | --- collectZombieJob: --- 10, [10763]
[2025-12-12 22:13:06] 2025-12-13 03:12:27,120 | INFO     | zombie collector waiting for pid 10763
[2025-12-12 22:13:06] 2025-12-13 03:12:27,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 22:13:06] 2025-12-13 03:12:27,120 | INFO     | collected zombie processes
[2025-12-12 22:13:06] 2025-12-13 03:12:27,121 | INFO     | will attempt to kill all subprocesses of pid=10763
[2025-12-12 22:13:06] 2025-12-13 03:12:27,210 | INFO     | process IDs to be killed: [10763] (in reverse order)
[2025-12-12 22:13:06] 2025-12-13 03:12:27,263 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 22:13:06] 2025-12-13 03:12:27,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 22:13:06] 2025-12-13 03:12:27,268 | INFO     | did not find any defunct processes belonging to 10763
[2025-12-12 22:13:06] 2025-12-13 03:12:27,272 | INFO     | did not find any defunct processes belonging to 10763
[2025-12-12 22:13:06] 2025-12-13 03:12:27,272 | INFO     | ready for new job
[2025-12-12 22:13:06] 2025-12-13 03:12:27,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 22:13:06] 2025-12-13 03:12:27,274 | INFO     | ***************************************
[2025-12-12 22:13:06] 2025-12-13 03:12:27,274 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 22:13:06] 2025-12-13 03:12:27,274 | INFO     | ***************************************
[2025-12-12 22:13:06] 2025-12-13 03:12:27,274 | INFO     | 
[2025-12-12 22:13:06] 2025-12-13 03:12:27,275 | INFO     | architecture information:
[2025-12-12 22:13:06] 2025-12-13 03:12:27,275 | INFO     | executing command: cat /etc/os-release
[2025-12-12 22:13:06] 2025-12-13 03:12:27,291 | INFO     | cat /etc/os-release:
[2025-12-12 22:13:06] NAME="CentOS Linux"
[2025-12-12 22:13:06] VERSION="7 (Core)"
[2025-12-12 22:13:06] ID="centos"
[2025-12-12 22:13:06] ID_LIKE="rhel fedora"
[2025-12-12 22:13:06] VERSION_ID="7"
[2025-12-12 22:13:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 22:13:06] ANSI_COLOR="0;31"
[2025-12-12 22:13:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 22:13:06] HOME_URL="https://www.centos.org/"
[2025-12-12 22:13:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 22:13:06] 
[2025-12-12 22:13:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 22:13:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 22:13:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 22:13:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 22:13:06] 
[2025-12-12 22:13:06] 2025-12-13 03:12:27,292 | INFO     | ***************************************
[2025-12-12 22:13:06] 2025-12-13 03:12:27,795 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-12 22:13:06] 2025-12-13 03:12:27,813 | INFO     | sufficient remaining disk space (18683527168 B)
[2025-12-12 22:13:06] 2025-12-13 03:12:27,814 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 22:13:06] 2025-12-13 03:12:27,814 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 22:13:06] 2025-12-13 03:12:27,814 | INFO     | update_server=False
[2025-12-12 22:13:06] 2025-12-13 03:12:27,815 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 22:13:06] 2025-12-13 03:12:27,979 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-12 22:13:06] 2025-12-13 03:12:27,979 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-12 22:13:06] 2025-12-13 03:12:27,982 | INFO     | all payload control threads have been joined
[2025-12-12 22:13:06] 2025-12-13 03:12:27,982 | INFO     | all data control threads have been joined
[2025-12-12 22:13:06] 2025-12-13 03:12:27,986 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 22:13:06] 2025-12-13 03:12:27,987 | INFO     | will abort loop
[2025-12-12 22:13:06] 2025-12-13 03:12:28,246 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 22:13:06] 2025-12-13 03:12:28,394 | INFO     | all job control threads have been joined
[2025-12-12 22:13:06] 2025-12-13 03:12:28,820 | INFO     | [job] retrieve thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:28,979 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 22:13:06] 2025-12-13 03:12:28,992 | INFO     | [data] control thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:28,993 | INFO     | [job] job monitor thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:28,993 | INFO     | [payload] control thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:29,083 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:29,299 | INFO     | [data] copytool_in thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:29,399 | INFO     | [job] control thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:29,634 | INFO     | [payload] failed_post thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:29,867 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:30,153 | INFO     | [job] validate thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:30,238 | INFO     | [payload] validate_post thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:30,251 | INFO     | [data] copytool_out thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:30,254 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:30,265 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:30,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 22:13:06] 2025-12-13 03:12:31,741 | INFO     | [job] queue monitor thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:32,985 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 22:13:06] 2025-12-13 03:12:58,446 | INFO     | PID=4127 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-12 22:13:06] 2025-12-13 03:12:58,447 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 22:13:06] 2025-12-13 03:12:58,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 22:13:06] 2025-12-13 03:12:58,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 22:13:06] 2025-12-13 03:13:00,947 | INFO     | [monitor] cgroup control has ended
[2025-12-12 22:13:06] 2025-12-13 03:13:01,130 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456868828992)>', '<ExcThread(monitor, started 140456302212864)>']
[2025-12-12 22:13:06] 2025-12-13 03:13:01,463 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 22:13:06] 2025-12-13 03:13:01,463 | INFO     | [monitor] control thread has ended
[2025-12-12 22:13:06] 2025-12-13 03:13:06,148 | INFO     | all workflow threads have been joined
[2025-12-12 22:13:06] 2025-12-13 03:13:06,148 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 22:13:06] 2025-12-13 03:13:06,149 | INFO     | traces error code: 0
[2025-12-12 22:13:06] 2025-12-13 03:13:06,149 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 22:13:06] 2025-12-13 03:13:06,250 [wrapper] ==== pilot stdout END ====
[2025-12-12 22:13:06] 2025-12-13 03:13:06,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 22:13:06] 2025-12-13 03:13:06,259 [wrapper] pilotpid: 4127
[2025-12-12 22:13:06] 2025-12-13 03:13:06,263 [wrapper] Pilot exit status: 0
[2025-12-12 22:13:06] 2025-12-13 03:13:06,280 [wrapper] pandaids: 6928799344
[2025-12-12 22:13:06] 2025-12-13 03:13:06,328 [wrapper] cleanup supervisor_pilot 31242 4128
[2025-12-12 22:13:06] 2025-12-13 03:13:06,332 [wrapper] Test setup, not cleaning
[2025-12-12 22:13:06] 2025-12-13 03:13:06,337 [wrapper] apfmon messages muted
[2025-12-12 22:13:06] 2025-12-13 03:13:06,341 [wrapper] ==== wrapper stdout END ====
[2025-12-12 22:13:06] 2025-12-13 03:13:06,346 [wrapper] ==== wrapper stderr END ====
[2025-12-12 22:13:06]  *** Error codes and diagnostics ***
[2025-12-12 22:13:06]     "exeErrorCode": 0,
[2025-12-12 22:13:06]     "exeErrorDiag": "",
[2025-12-12 22:13:06]     "pilotErrorCode": 0,
[2025-12-12 22:13:06]     "pilotErrorDiag": "",
[2025-12-12 22:13:06]  *** Listing of results directory ***
[2025-12-12 22:13:06] total 332840
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas      5112 Dec 12 19:49 queuedata.json
[2025-12-12 22:13:06] -rwx------ 1 boincer umatlas     36322 Dec 12 19:49 runpilot2-wrapper.sh
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas    579449 Dec 12 19:49 pilot3.tar.gz
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas       100 Dec 12 19:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 22:13:06] -rwxr-xr-x 1 boincer umatlas      7986 Dec 12 19:59 run_atlas
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas       105 Dec 12 19:59 job.xml
[2025-12-12 22:13:06] -rw-r--r-- 2 boincer umatlas 191149243 Dec 12 19:59 EVNT.47886829._000017.pool.root.1
[2025-12-12 22:13:06] -rw-r--r-- 2 boincer umatlas     15847 Dec 12 19:59 start_atlas.sh
[2025-12-12 22:13:06] drwxrwx--x 2 boincer umatlas      4096 Dec 12 19:59 shared
[2025-12-12 22:13:06] -rw-r--r-- 2 boincer umatlas    592407 Dec 12 19:59 input.tar.gz
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas         0 Dec 12 19:59 boinc_lockfile
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas      2533 Dec 12 19:59 pandaJob.out
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas        57 Dec 12 19:59 setup.sh.local
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas    991720 Dec 12 19:59 agis_schedconf.cvmfs.json
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas   1516240 Dec 12 19:59 agis_ddmendpoints.agis.ALL.json
[2025-12-12 22:13:06] drwx------ 5 boincer umatlas      4096 Dec 12 19:59 pilot3
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas      5910 Dec 12 22:10 init_data.xml
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas 142769380 Dec 12 22:11 HITS.47886831._000368.pool.root.1
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas       529 Dec 12 22:11 boinc_task_state.xml
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas      1049 Dec 12 22:12 memory_monitor_summary.json
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas    381730 Dec 12 22:12 log.47886831._000368.job.log.tgz.1
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas      7840 Dec 12 22:12 heartbeat.json
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas      8192 Dec 12 22:12 boinc_mmap_file
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas        27 Dec 12 22:12 wrapper_checkpoint.txt
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas        95 Dec 12 22:12 pilot_heartbeat.json
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas      4931 Dec 12 22:13 pilotlog.txt
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas   1116558 Dec 12 22:13 log.47886831._000368.job.log.1
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas       357 Dec 12 22:13 output.list
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas       620 Dec 12 22:13 runtime_log
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas   1515520 Dec 12 22:13 result.tar.gz
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas      9342 Dec 12 22:13 runtime_log.err
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas       661 Dec 12 22:13 rAKKDmL0So8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6ERKDmoBmcsm.diag
[2025-12-12 22:13:06] -rw-r--r-- 1 boincer umatlas     20894 Dec 12 22:13 stderr.txt
[2025-12-12 22:13:06] HITS file was successfully produced:
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas 142769380 Dec 12 22:11 shared/HITS.pool.root.1
[2025-12-12 22:13:06]  *** Contents of shared directory: ***
[2025-12-12 22:13:06] total 328172
[2025-12-12 22:13:06] -rw-r--r-- 2 boincer umatlas 191149243 Dec 12 19:59 ATLAS.root_0
[2025-12-12 22:13:06] -rw-r--r-- 2 boincer umatlas     15847 Dec 12 19:59 start_atlas.sh
[2025-12-12 22:13:06] -rw-r--r-- 2 boincer umatlas    592407 Dec 12 19:59 input.tar.gz
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas 142769380 Dec 12 22:11 HITS.pool.root.1
[2025-12-12 22:13:06] -rw------- 1 boincer umatlas   1515520 Dec 12 22:13 result.tar.gz
22:13:07 (32438): run_atlas exited; CPU time 59622.572650
22:13:07 (32438): called boinc_finish(0)

</stderr_txt>
]]>

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