Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
20:05:50 (2993162): wrapper (7.7.26015): starting
20:05:50 (2993162): wrapper: running run_atlas (--nthreads 3)
[2025-12-13 20:05:50] Arguments: --nthreads 3
[2025-12-13 20:05:50] Threads: 3
[2025-12-13 20:05:50] Checking for CVMFS
[2025-12-13 20:05:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 20:05:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 20:05:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 20:05:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 20:05:50] 2.12.7.0 2398205 1093 50984 153969 0 57 4237364 6144001 1834 130560 0 1637432 99.970 106110 2112 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.46:3128 1
[2025-12-13 20:05:50] CVMFS is ok
[2025-12-13 20:05:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 20:05:50] Checking for apptainer binary...
[2025-12-13 20:05:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 20:05:50] Running /usr/bin/apptainer --version
[2025-12-13 20:05:50] apptainer version 1.4.2
[2025-12-13 20:05:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 20:05:51] Ryzen3
[2025-12-13 20:05:51] apptainer works
[2025-12-13 20:05:51] Set ATHENA_PROC_NUMBER=3
[2025-12-13 20:05:51] Set ATHENA_CORE_NUMBER=3
[2025-12-13 20:05:51] Starting ATLAS job with PandaID=6926908628
[2025-12-13 20:05:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 05:43:59]  *** The last 200 lines of the pilot log: ***
[2025-12-14 05:43:59] 2025-12-14 04:43:16,837 | INFO     | time since job start (34639s) is within the limit (174528.0s)
[2025-12-14 05:43:59] 2025-12-14 04:43:17,084 | INFO     | monitor loop #2601: job 0:6926908628 is in state 'finished'
[2025-12-14 05:43:59] 2025-12-14 04:43:17,084 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 05:43:59] 2025-12-14 04:43:18,729 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-14 05:43:59] 2025-12-14 04:43:18,731 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3973.4212499999994
[2025-12-14 05:43:59] 2025-12-14 04:43:18,733 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6926908628/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 05:43:59] 2025-12-14 04:43:18,733 | INFO     | extracted standard info from prmon json
[2025-12-14 05:43:59] 2025-12-14 04:43:18,733 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 05:43:59] 2025-12-14 04:43:18,734 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 05:43:59] 2025-12-14 04:43:18,740 | INFO     | fitting pss+swap vs Time
[2025-12-14 05:43:59] 2025-12-14 04:43:18,741 | INFO     | sum of square deviations: 56822747819.99295
[2025-12-14 05:43:59] 2025-12-14 04:43:18,746 | INFO     | sum of deviations: 250582276963.8381
[2025-12-14 05:43:59] 2025-12-14 04:43:18,746 | INFO     | mean x: 1765670077.5035212
[2025-12-14 05:43:59] 2025-12-14 04:43:18,746 | INFO     | mean y: 2554521.0809859154
[2025-12-14 05:43:59] 2025-12-14 04:43:18,746 | INFO     | intersect: -7783862809.340253
[2025-12-14 05:43:59] 2025-12-14 04:43:18,747 | INFO     | chi2: 3.495479152585175
[2025-12-14 05:43:59] 2025-12-14 04:43:18,747 | INFO     | sum of square deviations: 55335315889.99281
[2025-12-14 05:43:59] 2025-12-14 04:43:18,753 | INFO     | sum of deviations: 339931984548.08527
[2025-12-14 05:43:59] 2025-12-14 04:43:18,753 | INFO     | mean x: 1765669925.0035524
[2025-12-14 05:43:59] 2025-12-14 04:43:18,753 | INFO     | mean y: 2563650.9573712256
[2025-12-14 05:43:59] 2025-12-14 04:43:18,753 | INFO     | intersect: -10844174494.651947
[2025-12-14 05:43:59] 2025-12-14 04:43:18,754 | INFO     | chi2: 2.127203302986148
[2025-12-14 05:43:59] 2025-12-14 04:43:18,754 | INFO     | current chi2=2.127203302986148 (change=39.14415706319067 %)
[2025-12-14 05:43:59] 2025-12-14 04:43:18,754 | INFO     | sum of square deviations: 53874070497.49284
[2025-12-14 05:43:59] 2025-12-14 04:43:18,760 | INFO     | sum of deviations: 335814189954.0376
[2025-12-14 05:43:59] 2025-12-14 04:43:18,760 | INFO     | mean x: 1765669772.5035841
[2025-12-14 05:43:59] 2025-12-14 04:43:18,760 | INFO     | mean y: 2563221.2311827955
[2025-12-14 05:43:59] 2025-12-14 04:43:18,760 | INFO     | intersect: -11003417186.490463
[2025-12-14 05:43:59] 2025-12-14 04:43:18,760 | INFO     | chi2: 2.1262436625703436
[2025-12-14 05:43:59] 2025-12-14 04:43:18,760 | INFO     | current chi2=2.1262436625703436 (change=0.045112773868731075 %)
[2025-12-14 05:43:59] 2025-12-14 04:43:18,760 | INFO     | right removable region: 557
[2025-12-14 05:43:59] 2025-12-14 04:43:18,761 | INFO     | sum of square deviations: 55335314669.99281
[2025-12-14 05:43:59] 2025-12-14 04:43:18,766 | INFO     | sum of deviations: 141631130162.5025
[2025-12-14 05:43:59] 2025-12-14 04:43:18,766 | INFO     | mean x: 1765670230.0035524
[2025-12-14 05:43:59] 2025-12-14 04:43:18,766 | INFO     | mean y: 2565647.2486678506
[2025-12-14 05:43:59] 2025-12-14 04:43:18,767 | INFO     | intersect: -4516679823.045887
[2025-12-14 05:43:59] 2025-12-14 04:43:18,767 | INFO     | chi2: 1.4779382177157134
[2025-12-14 05:43:59] 2025-12-14 04:43:18,767 | INFO     | current chi2=1.4779382177157134 (change=57.71858010874805 %)
[2025-12-14 05:43:59] 2025-12-14 04:43:18,767 | INFO     | sum of square deviations: 53874068057.49284
[2025-12-14 05:43:59] 2025-12-14 04:43:18,773 | INFO     | sum of deviations: 133863890929.50197
[2025-12-14 05:43:59] 2025-12-14 04:43:18,773 | INFO     | mean x: 1765670382.5035841
[2025-12-14 05:43:59] 2025-12-14 04:43:18,773 | INFO     | mean y: 2566461.7491039424
[2025-12-14 05:43:59] 2025-12-14 04:43:18,773 | INFO     | intersect: -4384692863.993215
[2025-12-14 05:43:59] 2025-12-14 04:43:18,773 | INFO     | chi2: 1.4681925883870797
[2025-12-14 05:43:59] 2025-12-14 04:43:18,774 | INFO     | current chi2=1.4681925883870797 (change=0.6594070856152913 %)
[2025-12-14 05:43:59] 2025-12-14 04:43:18,774 | INFO     | left removable region: 20
[2025-12-14 05:43:59] 2025-12-14 04:43:18,774 | INFO     | sum of square deviations: 48017543487.99265
[2025-12-14 05:43:59] 2025-12-14 04:43:18,779 | INFO     | sum of deviations: 190981237650.93658
[2025-12-14 05:43:59] 2025-12-14 04:43:18,779 | INFO     | mean x: 1765670352.0037243
[2025-12-14 05:43:59] 2025-12-14 04:43:18,779 | INFO     | mean y: 2578593.031657356
[2025-12-14 05:43:59] 2025-12-14 04:43:18,779 | INFO     | intersect: -7020061146.828409
[2025-12-14 05:43:59] 2025-12-14 04:43:18,780 | INFO     | chi2: 0.06707104307965311
[2025-12-14 05:43:59] 2025-12-14 04:43:18,780 | INFO     | current memory leak: 3.98 B/s (using 537 data points, chi2=0.07)
[2025-12-14 05:43:59] 2025-12-14 04:43:18,780 | INFO     | could have reported an average CPU frequency of 3950 MHz (23 samples)
[2025-12-14 05:43:59] 2025-12-14 04:43:18,780 | INFO     | ..............................
[2025-12-14 05:43:59] 2025-12-14 04:43:18,780 | INFO     | . Timing measurements:
[2025-12-14 05:43:59] 2025-12-14 04:43:18,780 | INFO     | . get job = 0 s
[2025-12-14 05:43:59] 2025-12-14 04:43:18,781 | INFO     | . initial setup = 1 s
[2025-12-14 05:43:59] 2025-12-14 04:43:18,781 | INFO     | . payload setup = 10 s
[2025-12-14 05:43:59] 2025-12-14 04:43:18,781 | INFO     | . stage-in = 0 s
[2025-12-14 05:43:59] 2025-12-14 04:43:18,781 | INFO     | . payload execution = 34605 s
[2025-12-14 05:43:59] 2025-12-14 04:43:18,781 | INFO     | . stage-out = 1 s
[2025-12-14 05:43:59] 2025-12-14 04:43:18,781 | INFO     | . log creation = 0 s
[2025-12-14 05:43:59] 2025-12-14 04:43:18,781 | INFO     | ..............................
[2025-12-14 05:43:59] 2025-12-14 04:43:18,842 | INFO     | time since job start (34641s) is within the limit (174528.0s)
[2025-12-14 05:43:59] 2025-12-14 04:43:19,180 | INFO     | 
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | job summary report
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | --------------------------------------------------
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | PanDA job id: 6926908628
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | task id: 47866654
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | errors: (none)
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | pilot state: finished 
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | transexitcode: 0
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | exeerrorcode: 0
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | exeerrordiag: 
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | exitcode: 0
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | exitmsg: OK
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | cpuconsumptiontime: 102088 s
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | nevents: 1000
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | neventsw: 0
[2025-12-14 05:43:59] 2025-12-14 04:43:19,181 | INFO     | pid: 3003981
[2025-12-14 05:43:59] 2025-12-14 04:43:19,182 | INFO     | pgrp: 3003981
[2025-12-14 05:43:59] 2025-12-14 04:43:19,182 | INFO     | corecount: 3
[2025-12-14 05:43:59] 2025-12-14 04:43:19,182 | INFO     | event service: False
[2025-12-14 05:43:59] 2025-12-14 04:43:19,182 | INFO     | sizes: {0: 2284524, 3: 2284786, 11: 2284814, 34620: 2345200, 34622: 2354194, 34626: 2354250, 34629: 2354624}
[2025-12-14 05:43:59] 2025-12-14 04:43:19,182 | INFO     | --------------------------------------------------
[2025-12-14 05:43:59] 2025-12-14 04:43:19,182 | INFO     | 
[2025-12-14 05:43:59] 2025-12-14 04:43:19,182 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-12-14 05:43:59] 2025-12-14 04:43:19,196 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,196 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,196 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,196 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,197 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 05:43:59] 2025-12-14 04:43:19,198 | INFO     | job 6926908628 has completed (purged errors)
[2025-12-14 05:43:59] 2025-12-14 04:43:19,198 | INFO     | overall cleanup function is called
[2025-12-14 05:43:59] 2025-12-14 04:43:20,240 | INFO     | --- collectZombieJob: --- 10, [3003981]
[2025-12-14 05:43:59] 2025-12-14 04:43:20,240 | INFO     | zombie collector waiting for pid 3003981
[2025-12-14 05:43:59] 2025-12-14 04:43:20,241 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 05:43:59] 2025-12-14 04:43:20,241 | INFO     | collected zombie processes
[2025-12-14 05:43:59] 2025-12-14 04:43:20,241 | INFO     | will attempt to kill all subprocesses of pid=3003981
[2025-12-14 05:43:59] 2025-12-14 04:43:20,323 | INFO     | process IDs to be killed: [3003981] (in reverse order)
[2025-12-14 05:43:59] 2025-12-14 04:43:20,359 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 05:43:59] 2025-12-14 04:43:20,360 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 05:43:59] 2025-12-14 04:43:20,362 | INFO     | did not find any defunct processes belonging to 3003981
[2025-12-14 05:43:59] 2025-12-14 04:43:20,364 | INFO     | did not find any defunct processes belonging to 3003981
[2025-12-14 05:43:59] 2025-12-14 04:43:20,364 | INFO     | ready for new job
[2025-12-14 05:43:59] 2025-12-14 04:43:20,364 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 05:43:59] 2025-12-14 04:43:20,384 | INFO     | ***************************************
[2025-12-14 05:43:59] 2025-12-14 04:43:20,384 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 05:43:59] 2025-12-14 04:43:20,384 | INFO     | ***************************************
[2025-12-14 05:43:59] 2025-12-14 04:43:20,384 | INFO     | 
[2025-12-14 05:43:59] 2025-12-14 04:43:20,385 | INFO     | architecture information:
[2025-12-14 05:43:59] 2025-12-14 04:43:20,385 | INFO     | executing command: cat /etc/os-release
[2025-12-14 05:43:59] 2025-12-14 04:43:20,397 | INFO     | cat /etc/os-release:
[2025-12-14 05:43:59] NAME="CentOS Linux"
[2025-12-14 05:43:59] VERSION="7 (Core)"
[2025-12-14 05:43:59] ID="centos"
[2025-12-14 05:43:59] ID_LIKE="rhel fedora"
[2025-12-14 05:43:59] VERSION_ID="7"
[2025-12-14 05:43:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 05:43:59] ANSI_COLOR="0;31"
[2025-12-14 05:43:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 05:43:59] HOME_URL="https://www.centos.org/"
[2025-12-14 05:43:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 05:43:59] 
[2025-12-14 05:43:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 05:43:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 05:43:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 05:43:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 05:43:59] 
[2025-12-14 05:43:59] 2025-12-14 04:43:20,397 | INFO     | ***************************************
[2025-12-14 05:43:59] 2025-12-14 04:43:20,899 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-12-14 05:43:59] 2025-12-14 04:43:20,911 | INFO     | sufficient remaining disk space (233643704320 B)
[2025-12-14 05:43:59] 2025-12-14 04:43:20,911 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 05:43:59] 2025-12-14 04:43:20,911 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 05:43:59] 2025-12-14 04:43:20,911 | INFO     | update_server=False
[2025-12-14 05:43:59] 2025-12-14 04:43:20,911 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 05:43:59] 2025-12-14 04:43:20,911 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:43:59] 2025-12-14 04:43:20,911 | INFO     | aborting loop
[2025-12-14 05:43:59] 2025-12-14 04:43:20,912 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 05:43:59] 2025-12-14 04:43:21,054 | INFO     | all data control threads have been joined
[2025-12-14 05:43:59] 2025-12-14 04:43:21,644 | INFO     | all payload control threads have been joined
[2025-12-14 05:43:59] 2025-12-14 04:43:21,917 | INFO     | [job] retrieve thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:21,917 | INFO     | [job] job monitor thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:22,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 05:43:59] 2025-12-14 04:43:22,059 | INFO     | [data] control thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:22,396 | INFO     | [payload] validate_post thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:22,528 | INFO     | all job control threads have been joined
[2025-12-14 05:43:59] 2025-12-14 04:43:22,648 | INFO     | [payload] control thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:22,914 | INFO     | [data] copytool_out thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,135 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,165 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,189 | INFO     | [job] validate thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,194 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,205 | INFO     | [data] copytool_in thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,352 | INFO     | [payload] failed_post thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,531 | INFO     | [job] control thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:23,858 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:43:59] 2025-12-14 04:43:24,863 | INFO     | [job] queue monitor thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:26,025 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 05:43:59] 2025-12-14 04:43:52,020 | INFO     | PID=2996879 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 05:43:59] 2025-12-14 04:43:52,020 | INFO     | .. there are 4 such processes running
[2025-12-14 05:43:59] 2025-12-14 04:43:52,021 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 05:43:59] 2025-12-14 04:43:52,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 05:43:59] 2025-12-14 04:43:52,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 05:43:59] 2025-12-14 04:43:53,330 | INFO     | [monitor] cgroup control has ended
[2025-12-14 05:43:59] 2025-12-14 04:43:54,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140545251145536)>', '<ExcThread(monitor, started 140544474867456)>']
[2025-12-14 05:43:59] 2025-12-14 04:43:55,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 05:43:59] 2025-12-14 04:43:55,032 | INFO     | [monitor] control thread has ended
[2025-12-14 05:43:59] 2025-12-14 04:43:59,358 | INFO     | all workflow threads have been joined
[2025-12-14 05:43:59] 2025-12-14 04:43:59,358 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 05:43:59] 2025-12-14 04:43:59,358 | INFO     | traces error code: 0
[2025-12-14 05:43:59] 2025-12-14 04:43:59,358 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 05:43:59] 2025-12-14 04:43:59,437 [wrapper] ==== pilot stdout END ====
[2025-12-14 05:43:59] 2025-12-14 04:43:59,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 05:43:59] 2025-12-14 04:43:59,441 [wrapper] pilotpid: 2996879
[2025-12-14 05:43:59] 2025-12-14 04:43:59,443 [wrapper] Pilot exit status: 0
[2025-12-14 05:43:59] 2025-12-14 04:43:59,469 [wrapper] pandaids: 6926908628
[2025-12-14 05:43:59] 2025-12-14 04:43:59,494 [wrapper] cleanup supervisor_pilot 3303949 2996880
[2025-12-14 05:43:59] 2025-12-14 04:43:59,496 [wrapper] Test setup, not cleaning
[2025-12-14 05:43:59] 2025-12-14 04:43:59,498 [wrapper] apfmon messages muted
[2025-12-14 05:43:59] 2025-12-14 04:43:59,500 [wrapper] ==== wrapper stdout END ====
[2025-12-14 05:43:59] 2025-12-14 04:43:59,502 [wrapper] ==== wrapper stderr END ====
[2025-12-14 05:43:59]  *** Error codes and diagnostics ***
[2025-12-14 05:43:59]     "exeErrorCode": 0,
[2025-12-14 05:43:59]     "exeErrorDiag": "",
[2025-12-14 05:43:59]     "pilotErrorCode": 0,
[2025-12-14 05:43:59]     "pilotErrorDiag": "",
[2025-12-14 05:43:59]  *** Listing of results directory ***
[2025-12-14 05:43:59] insgesamt 927976
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc    579449 11. Dez 15:24 pilot3.tar.gz
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc      5112 11. Dez 15:27 queuedata.json
[2025-12-14 05:43:59] -rwx------ 1 boinc boinc     36292 11. Dez 15:27 runpilot2-wrapper.sh
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc       100 13. Dez 20:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 05:43:59] -rwxr-xr-x 1 boinc boinc      7986 13. Dez 20:05 run_atlas
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc       105 13. Dez 20:05 job.xml
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc      6916 13. Dez 20:05 init_data.xml
[2025-12-14 05:43:59] -rw-r--r-- 2 boinc boinc 327111361 13. Dez 20:05 EVNT.47866652._000019.pool.root.1
[2025-12-14 05:43:59] drwxrwx--x 2 boinc boinc      4096 13. Dez 20:05 shared
[2025-12-14 05:43:59] -rw-r--r-- 2 boinc boinc    592582 13. Dez 20:05 input.tar.gz
[2025-12-14 05:43:59] -rw-r--r-- 2 boinc boinc     15847 13. Dez 20:05 start_atlas.sh
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc         0 13. Dez 20:05 boinc_lockfile
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc      2822 13. Dez 20:05 pandaJob.out
[2025-12-14 05:43:59] -rw------- 1 boinc boinc        52 13. Dez 20:05 setup.sh.local
[2025-12-14 05:43:59] -rw------- 1 boinc boinc    991736 13. Dez 20:05 agis_schedconf.cvmfs.json
[2025-12-14 05:43:59] drwx------ 5 boinc boinc      4096 13. Dez 20:05 pilot3
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc       532 14. Dez 05:39 boinc_task_state.xml
[2025-12-14 05:43:59] -rw------- 1 boinc boinc 606651957 14. Dez 05:42 HITS.47866654._000188.pool.root.1
[2025-12-14 05:43:59] -rw------- 1 boinc boinc      1037 14. Dez 05:43 memory_monitor_summary.json
[2025-12-14 05:43:59] -rw------- 1 boinc boinc   1516240 14. Dez 05:43 agis_ddmendpoints.agis.ALL.json
[2025-12-14 05:43:59] -rw------- 1 boinc boinc   1308121 14. Dez 05:43 log.47866654._000188.job.log.tgz.1
[2025-12-14 05:43:59] -rw------- 1 boinc boinc     27995 14. Dez 05:43 heartbeat.json
[2025-12-14 05:43:59] -rw------- 1 boinc boinc        95 14. Dez 05:43 pilot_heartbeat.json
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc      8192 14. Dez 05:43 boinc_mmap_file
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc        29 14. Dez 05:43 wrapper_checkpoint.txt
[2025-12-14 05:43:59] -rw------- 1 boinc boinc      4824 14. Dez 05:43 pilotlog.txt
[2025-12-14 05:43:59] -rw------- 1 boinc boinc   4950886 14. Dez 05:43 log.47866654._000188.job.log.1
[2025-12-14 05:43:59] -rw------- 1 boinc boinc       353 14. Dez 05:43 output.list
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc       620 14. Dez 05:43 runtime_log
[2025-12-14 05:43:59] -rw------- 1 boinc boinc   6297600 14. Dez 05:43 result.tar.gz
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc      9270 14. Dez 05:43 runtime_log.err
[2025-12-14 05:43:59] -rw------- 1 boinc boinc       655 14. Dez 05:43 4QuLDm3own8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIyQKDmersLZm.diag
[2025-12-14 05:43:59] -rw-r--r-- 1 boinc boinc     20901 14. Dez 05:43 stderr.txt
[2025-12-14 05:43:59] HITS file was successfully produced:
[2025-12-14 05:43:59] -rw------- 1 boinc boinc 606651957 14. Dez 05:42 shared/HITS.pool.root.1
[2025-12-14 05:43:59]  *** Contents of shared directory: ***
[2025-12-14 05:43:59] insgesamt 918640
[2025-12-14 05:43:59] -rw-r--r-- 2 boinc boinc 327111361 13. Dez 20:05 ATLAS.root_0
[2025-12-14 05:43:59] -rw-r--r-- 2 boinc boinc    592582 13. Dez 20:05 input.tar.gz
[2025-12-14 05:43:59] -rw-r--r-- 2 boinc boinc     15847 13. Dez 20:05 start_atlas.sh
[2025-12-14 05:43:59] -rw------- 1 boinc boinc 606651957 14. Dez 05:42 HITS.pool.root.1
[2025-12-14 05:43:59] -rw------- 1 boinc boinc   6297600 14. Dez 05:43 result.tar.gz
05:44:01 (2993162): run_atlas exited; CPU time 102284.858757
05:44:01 (2993162): called boinc_finish(0)

</stderr_txt>
]]>

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