Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:50:41 (31540): wrapper (7.7.26015): starting
01:50:41 (31540): wrapper: running run_atlas (--nthreads 8)
[2025-12-13 01:50:41] Arguments: --nthreads 8
[2025-12-13 01:50:41] Threads: 8
[2025-12-13 01:50:41] Checking for CVMFS
[2025-12-13 01:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-13 01:50:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-13 01:50:44] Running cvmfs_config stat atlas.cern.ch
[2025-12-13 01:50:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-13 01:50:45] 2.11.2.0 28366 195957 139600 153942 3 153 15815440 25165825 4650 130560 12 64118494 99.887 34862038 2171 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-13 01:50:45] CVMFS is ok
[2025-12-13 01:50:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 01:50:45] Checking for apptainer binary...
[2025-12-13 01:50:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-13 01:50:45] Running /usr/bin/apptainer --version
[2025-12-13 01:50:45] apptainer version 1.3.2-1.el7
[2025-12-13 01:50:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 01:50:53] cg-vwn288.simple-grid.lan
[2025-12-13 01:50:53] apptainer works
[2025-12-13 01:50:53] Set ATHENA_PROC_NUMBER=8
[2025-12-13 01:50:53] Set ATHENA_CORE_NUMBER=8
[2025-12-13 01:50:53] Starting ATLAS job with PandaID=6928799351
[2025-12-13 01:50:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 06:36:53]  *** The last 200 lines of the pilot log: ***
[2025-12-13 06:36:53] 2025-12-13 05:36:05,189 | INFO     | fitting pss+swap vs Time
[2025-12-13 06:36:53] 2025-12-13 05:36:05,190 | INFO     | sum of square deviations: 5902093918.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,193 | INFO     | sum of deviations: 170195750226.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,193 | INFO     | mean x: 1765595935.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,193 | INFO     | mean y: 2385979.397003745
[2025-12-13 06:36:53] 2025-12-13 05:36:05,193 | INFO     | intersect: -50911226871.94308
[2025-12-13 06:36:53] 2025-12-13 05:36:05,194 | INFO     | chi2: 9.52528182598384
[2025-12-13 06:36:53] 2025-12-13 05:36:05,195 | INFO     | sum of square deviations: 5576683165.5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,197 | INFO     | sum of deviations: 184350559184.5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,197 | INFO     | mean x: 1765595782.5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,197 | INFO     | mean y: 2392488.034351145
[2025-12-13 06:36:53] 2025-12-13 05:36:05,203 | INFO     | intersect: -58363586022.50685
[2025-12-13 06:36:53] 2025-12-13 05:36:05,204 | INFO     | chi2: 8.81963294701527
[2025-12-13 06:36:53] 2025-12-13 05:36:05,204 | INFO     | current chi2=8.81963294701527 (change=7.4081679876772 %)
[2025-12-13 06:36:53] 2025-12-13 05:36:05,204 | INFO     | right removable region: 261
[2025-12-13 06:36:53] 2025-12-13 05:36:05,204 | INFO     | sum of square deviations: 5576683165.5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,207 | INFO     | sum of deviations: 76550108074.5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,207 | INFO     | mean x: 1765596087.5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,207 | INFO     | mean y: 2429850.4083969467
[2025-12-13 06:36:53] 2025-12-13 05:36:05,207 | INFO     | intersect: -24233584157.018425
[2025-12-13 06:36:53] 2025-12-13 05:36:05,208 | INFO     | chi2: 4.215407291830795
[2025-12-13 06:36:53] 2025-12-13 05:36:05,208 | INFO     | current chi2=4.215407291830795 (change=55.745064882682385 %)
[2025-12-13 06:36:53] 2025-12-13 05:36:05,208 | INFO     | sum of square deviations: 5263458688.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,210 | INFO     | sum of deviations: 5557517422.999994
[2025-12-13 06:36:53] 2025-12-13 05:36:05,211 | INFO     | mean x: 1765596240.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,211 | INFO     | mean y: 2464370.560311284
[2025-12-13 06:36:53] 2025-12-13 05:36:05,211 | INFO     | intersect: -1861772141.4795985
[2025-12-13 06:36:53] 2025-12-13 05:36:05,211 | INFO     | chi2: 1.3759768006997106
[2025-12-13 06:36:53] 2025-12-13 05:36:05,212 | INFO     | current chi2=1.3759768006997106 (change=67.3583901758136 %)
[2025-12-13 06:36:53] 2025-12-13 05:36:05,212 | INFO     | sum of square deviations: 4962187923.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,219 | INFO     | sum of deviations: -23354924972.5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,220 | INFO     | mean x: 1765596392.5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,220 | INFO     | mean y: 2478962.9325396824
[2025-12-13 06:36:53] 2025-12-13 05:36:05,220 | INFO     | intersect: 8312396265.222939
[2025-12-13 06:36:53] 2025-12-13 05:36:05,221 | INFO     | chi2: 0.8755276095931912
[2025-12-13 06:36:53] 2025-12-13 05:36:05,221 | INFO     | current chi2=0.8755276095931912 (change=36.370467209333135 %)
[2025-12-13 06:36:53] 2025-12-13 05:36:05,221 | INFO     | sum of square deviations: 4672638308.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,223 | INFO     | sum of deviations: -31657114124.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,224 | INFO     | mean x: 1765596545.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,224 | INFO     | mean y: 2483300.3886639676
[2025-12-13 06:36:53] 2025-12-13 05:36:05,224 | INFO     | intersect: 11964395958.235474
[2025-12-13 06:36:53] 2025-12-13 05:36:05,224 | INFO     | chi2: 0.8073421774998559
[2025-12-13 06:36:53] 2025-12-13 05:36:05,225 | INFO     | current chi2=0.8073421774998559 (change=7.787924829123005 %)
[2025-12-13 06:36:53] 2025-12-13 05:36:05,225 | INFO     | left removable region: 40
[2025-12-13 06:36:53] 2025-12-13 05:36:05,225 | INFO     | sum of square deviations: 3346927870.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,227 | INFO     | sum of deviations: -11271405845.000002
[2025-12-13 06:36:53] 2025-12-13 05:36:05,227 | INFO     | mean x: 1765596972.0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,227 | INFO     | mean y: 2490129.6787330317
[2025-12-13 06:36:53] 2025-12-13 05:36:05,228 | INFO     | intersect: 5948468293.264046
[2025-12-13 06:36:53] 2025-12-13 05:36:05,228 | INFO     | chi2: 0.015138032960272257
[2025-12-13 06:36:53] 2025-12-13 05:36:05,228 | INFO     | current memory leak: -3.37 B/s (using 221 data points, chi2=0.02)
[2025-12-13 06:36:53] 2025-12-13 05:36:05,230 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2025-12-13 06:36:53] 2025-12-13 05:36:05,230 | INFO     | ..............................
[2025-12-13 06:36:53] 2025-12-13 05:36:05,230 | INFO     | . Timing measurements:
[2025-12-13 06:36:53] 2025-12-13 05:36:05,230 | INFO     | . get job = 0 s
[2025-12-13 06:36:53] 2025-12-13 05:36:05,230 | INFO     | . initial setup = 10 s
[2025-12-13 06:36:53] 2025-12-13 05:36:05,230 | INFO     | . payload setup = 147 s
[2025-12-13 06:36:53] 2025-12-13 05:36:05,230 | INFO     | . stage-in = 0 s
[2025-12-13 06:36:53] 2025-12-13 05:36:05,231 | INFO     | . payload execution = 16400 s
[2025-12-13 06:36:53] 2025-12-13 05:36:05,231 | INFO     | . stage-out = 4 s
[2025-12-13 06:36:53] 2025-12-13 05:36:05,231 | INFO     | . log creation = 1 s
[2025-12-13 06:36:53] 2025-12-13 05:36:05,231 | INFO     | ..............................
[2025-12-13 06:36:53] 2025-12-13 05:36:05,453 | INFO     | 
[2025-12-13 06:36:53] 2025-12-13 05:36:05,453 | INFO     | job summary report
[2025-12-13 06:36:53] 2025-12-13 05:36:05,453 | INFO     | --------------------------------------------------
[2025-12-13 06:36:53] 2025-12-13 05:36:05,453 | INFO     | PanDA job id: 6928799351
[2025-12-13 06:36:53] 2025-12-13 05:36:05,453 | INFO     | task id: 47886831
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | errors: (none)
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | pilot state: finished 
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | transexitcode: 0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | exeerrorcode: 0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | exeerrordiag: 
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | exitcode: 0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | exitmsg: OK
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | cpuconsumptiontime: 60239 s
[2025-12-13 06:36:53] 2025-12-13 05:36:05,454 | INFO     | nevents: 400
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | neventsw: 0
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | pid: 9824
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | pgrp: 9824
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | corecount: 8
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | event service: False
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | sizes: {0: 2283811, 1: 2284010, 12: 2284010, 23: 2284038, 33: 2284066, 44: 2284122, 55: 2284278, 66: 2284306, 77: 2284334, 87: 2284390, 98: 2284988, 16552: 2315998
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | --------------------------------------------------
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | 
[2025-12-13 06:36:53] 2025-12-13 05:36:05,455 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-12-13 06:36:53] 2025-12-13 05:36:05,776 | INFO     | time since job start (16851s) is within the limit (174528.0s)
[2025-12-13 06:36:53] 2025-12-13 05:36:06,039 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | job 6928799351 has completed (purged errors)
[2025-12-13 06:36:53] 2025-12-13 05:36:06,041 | INFO     | overall cleanup function is called
[2025-12-13 06:36:53] 2025-12-13 05:36:07,052 | INFO     | --- collectZombieJob: --- 10, [9824]
[2025-12-13 06:36:53] 2025-12-13 05:36:07,052 | INFO     | zombie collector waiting for pid 9824
[2025-12-13 06:36:53] 2025-12-13 05:36:07,052 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 06:36:53] 2025-12-13 05:36:07,052 | INFO     | collected zombie processes
[2025-12-13 06:36:53] 2025-12-13 05:36:07,053 | INFO     | will attempt to kill all subprocesses of pid=9824
[2025-12-13 06:36:53] 2025-12-13 05:36:07,165 | INFO     | process IDs to be killed: [9824] (in reverse order)
[2025-12-13 06:36:53] 2025-12-13 05:36:07,672 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 06:36:53] 2025-12-13 05:36:07,672 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 06:36:53] 2025-12-13 05:36:07,677 | INFO     | did not find any defunct processes belonging to 9824
[2025-12-13 06:36:53] 2025-12-13 05:36:07,681 | INFO     | did not find any defunct processes belonging to 9824
[2025-12-13 06:36:53] 2025-12-13 05:36:07,682 | INFO     | ready for new job
[2025-12-13 06:36:53] 2025-12-13 05:36:07,682 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 06:36:53] 2025-12-13 05:36:07,685 | INFO     | ***************************************
[2025-12-13 06:36:53] 2025-12-13 05:36:07,685 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 06:36:53] 2025-12-13 05:36:07,685 | INFO     | ***************************************
[2025-12-13 06:36:53] 2025-12-13 05:36:07,685 | INFO     | 
[2025-12-13 06:36:53] 2025-12-13 05:36:07,686 | INFO     | pilot is running in a VM
[2025-12-13 06:36:53] 2025-12-13 05:36:07,686 | INFO     | architecture information:
[2025-12-13 06:36:53] 2025-12-13 05:36:07,687 | INFO     | executing command: cat /etc/os-release
[2025-12-13 06:36:53] 2025-12-13 05:36:07,928 | INFO     | cat /etc/os-release:
[2025-12-13 06:36:53] NAME="CentOS Linux"
[2025-12-13 06:36:53] VERSION="7 (Core)"
[2025-12-13 06:36:53] ID="centos"
[2025-12-13 06:36:53] ID_LIKE="rhel fedora"
[2025-12-13 06:36:53] VERSION_ID="7"
[2025-12-13 06:36:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 06:36:53] ANSI_COLOR="0;31"
[2025-12-13 06:36:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 06:36:53] HOME_URL="https://www.centos.org/"
[2025-12-13 06:36:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 06:36:53] 
[2025-12-13 06:36:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 06:36:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 06:36:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 06:36:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 06:36:53] 
[2025-12-13 06:36:53] 2025-12-13 05:36:07,929 | INFO     | ***************************************
[2025-12-13 06:36:53] 2025-12-13 05:36:08,433 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-12-13 06:36:53] 2025-12-13 05:36:08,705 | INFO     | sufficient remaining disk space (497119395840 B)
[2025-12-13 06:36:53] 2025-12-13 05:36:08,705 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 06:36:53] 2025-12-13 05:36:08,706 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 06:36:53] 2025-12-13 05:36:08,706 | INFO     | update_server=False
[2025-12-13 06:36:53] 2025-12-13 05:36:08,706 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 06:36:53] 2025-12-13 05:36:08,713 | INFO     | all payload control threads have been joined
[2025-12-13 06:36:53] 2025-12-13 05:36:08,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:36:53] 2025-12-13 05:36:08,715 | INFO     | aborting loop
[2025-12-13 06:36:53] 2025-12-13 05:36:09,210 | INFO     | all data control threads have been joined
[2025-12-13 06:36:53] 2025-12-13 05:36:09,292 | INFO     | all job control threads have been joined
[2025-12-13 06:36:53] 2025-12-13 05:36:09,488 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 06:36:53] 2025-12-13 05:36:09,712 | INFO     | [job] retrieve thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:09,719 | INFO     | [payload] control thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:09,722 | INFO     | [job] job monitor thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:09,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 06:36:53] 2025-12-13 05:36:10,004 | INFO     | [job] validate thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:10,109 | INFO     | [payload] failed_post thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:10,217 | INFO     | [data] control thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:10,223 | INFO     | [payload] validate_post thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:10,298 | INFO     | [job] control thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:10,393 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:36:53] 2025-12-13 05:36:10,436 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:10,777 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:10,869 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:10,962 | INFO     | [data] copytool_in thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:11,399 | INFO     | [job] queue monitor thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:11,986 | INFO     | [data] copytool_out thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:13,499 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:19,619 | INFO     | job.realtimelogging is not enabled
[2025-12-13 06:36:53] 2025-12-13 05:36:20,625 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 06:36:53] 2025-12-13 05:36:38,963 | INFO     | PID=3277 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 06:36:53] 2025-12-13 05:36:38,964 | INFO     | .. there are 9 such processes running
[2025-12-13 06:36:53] 2025-12-13 05:36:38,964 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 06:36:53] 2025-12-13 05:36:38,964 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 06:36:53] 2025-12-13 05:36:38,964 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 06:36:53] 2025-12-13 05:36:42,850 | INFO     | [monitor] cgroup control has ended
[2025-12-13 06:36:53] 2025-12-13 05:36:43,213 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140357643528000)>', '<ExcThread(monitor, started 140356863629056)>']
[2025-12-13 06:36:53] 2025-12-13 05:36:43,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 06:36:53] 2025-12-13 05:36:43,994 | INFO     | [monitor] control thread has ended
[2025-12-13 06:36:53] 2025-12-13 05:36:48,240 | INFO     | all workflow threads have been joined
[2025-12-13 06:36:53] 2025-12-13 05:36:48,240 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 06:36:53] 2025-12-13 05:36:48,241 | INFO     | traces error code: 0
[2025-12-13 06:36:53] 2025-12-13 05:36:48,241 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 06:36:53] 2025-12-13 05:36:48,727 [wrapper] ==== pilot stdout END ====
[2025-12-13 06:36:53] 2025-12-13 05:36:48,817 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 06:36:53] 2025-12-13 05:36:48,918 [wrapper] pilotpid: 3277
[2025-12-13 06:36:53] 2025-12-13 05:36:48,968 [wrapper] Pilot exit status: 0
[2025-12-13 06:36:53] 2025-12-13 05:36:49,442 [wrapper] pandaids: 6928799351
[2025-12-13 06:36:53] 2025-12-13 05:36:50,304 [wrapper] cleanup supervisor_pilot  6889 3278
[2025-12-13 06:36:53] 2025-12-13 05:36:50,405 [wrapper] Test setup, not cleaning
[2025-12-13 06:36:53] 2025-12-13 05:36:50,497 [wrapper] apfmon messages muted
[2025-12-13 06:36:53] 2025-12-13 05:36:50,597 [wrapper] ==== wrapper stdout END ====
[2025-12-13 06:36:53] 2025-12-13 05:36:50,697 [wrapper] ==== wrapper stderr END ====
[2025-12-13 06:36:53]  *** Error codes and diagnostics ***
[2025-12-13 06:36:53]     "exeErrorCode": 0,
[2025-12-13 06:36:53]     "exeErrorDiag": "",
[2025-12-13 06:36:53]     "pilotErrorCode": 0,
[2025-12-13 06:36:53]     "pilotErrorDiag": "",
[2025-12-13 06:36:53]  *** Listing of results directory ***
[2025-12-13 06:36:53] total 336248
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc      5112 Dec 13 01:49 queuedata.json
[2025-12-13 06:36:53] -rwx------. 1 boinc boinc     36322 Dec 13 01:49 runpilot2-wrapper.sh
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc    579449 Dec 13 01:49 pilot3.tar.gz
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc       100 Dec 13 01:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 06:36:53] -rwxr-xr-x. 1 boinc boinc      7986 Dec 13 01:50 run_atlas
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc       105 Dec 13 01:50 job.xml
[2025-12-13 06:36:53] -rw-r--r--. 2 boinc boinc 191149243 Dec 13 01:50 EVNT.47886829._000017.pool.root.1
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc      6392 Dec 13 01:50 init_data.xml
[2025-12-13 06:36:53] -rw-r--r--. 2 boinc boinc     15847 Dec 13 01:50 start_atlas.sh
[2025-12-13 06:36:53] drwxrwx--x. 2 boinc boinc        68 Dec 13 01:50 shared
[2025-12-13 06:36:53] -rw-r--r--. 2 boinc boinc    592408 Dec 13 01:50 input.tar.gz
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc         0 Dec 13 01:50 boinc_lockfile
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc      2533 Dec 13 01:50 pandaJob.out
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc    991720 Dec 13 01:55 agis_schedconf.cvmfs.json
[2025-12-13 06:36:53] drwx------. 5 boinc boinc      4096 Dec 13 01:55 pilot3
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc 143787349 Dec 13 06:33 HITS.47886831._000375.pool.root.1
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc       531 Dec 13 06:33 boinc_task_state.xml
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc      1014 Dec 13 06:34 memory_monitor_summary.json
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc   1516240 Dec 13 06:34 agis_ddmendpoints.agis.ALL.json
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc    504818 Dec 13 06:34 log.47886831._000375.job.log.tgz.1
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc        95 Dec 13 06:35 pilot_heartbeat.json
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc      7772 Dec 13 06:36 heartbeat.json
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc      8192 Dec 13 06:36 boinc_mmap_file
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc        28 Dec 13 06:36 wrapper_checkpoint.txt
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc      4955 Dec 13 06:36 pilotlog.txt
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc   2234238 Dec 13 06:36 log.47886831._000375.job.log.1
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc       357 Dec 13 06:36 output.list
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc       620 Dec 13 06:36 runtime_log
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc   2754560 Dec 13 06:36 result.tar.gz
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc      8817 Dec 13 06:36 runtime_log.err
[2025-12-13 06:36:53] -rw-------. 1 boinc boinc       657 Dec 13 06:36 kxSKDmL0So8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDFRKDmm8Nizm.diag
[2025-12-13 06:36:53] -rw-r--r--. 1 boinc boinc     20611 Dec 13 06:36 stderr.txt
[2025-12-13 06:36:54] HITS file was successfully produced:
[2025-12-13 06:36:54] -rw-------. 1 boinc boinc 143787349 Dec 13 06:33 shared/HITS.pool.root.1
[2025-12-13 06:36:54]  *** Contents of shared directory: ***
[2025-12-13 06:36:54] total 330380
[2025-12-13 06:36:54] -rw-r--r--. 2 boinc boinc 191149243 Dec 13 01:50 ATLAS.root_0
[2025-12-13 06:36:54] -rw-r--r--. 2 boinc boinc     15847 Dec 13 01:50 start_atlas.sh
[2025-12-13 06:36:54] -rw-r--r--. 2 boinc boinc    592408 Dec 13 01:50 input.tar.gz
[2025-12-13 06:36:54] -rw-------. 1 boinc boinc 143787349 Dec 13 06:33 HITS.pool.root.1
[2025-12-13 06:36:54] -rw-------. 1 boinc boinc   2754560 Dec 13 06:36 result.tar.gz
06:36:55 (31540): run_atlas exited; CPU time 60456.487133
06:36:55 (31540): called boinc_finish(0)

</stderr_txt>
]]>

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