Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:50:11 (24525): wrapper (7.7.26015): starting
19:50:11 (24525): wrapper: running run_atlas (--nthreads 8)
[2025-12-12 19:50:11] Arguments: --nthreads 8
[2025-12-12 19:50:11] Threads: 8
[2025-12-12 19:50:11] Checking for CVMFS
[2025-12-12 19:50:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 19:50:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 19:50:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 19:50:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 19:50:12] 2.11.2.0 2908 193642 95804 153942 2 1 13763157 20275200 1 130560 2 74100148 99.938 9024962 26643 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-12 19:50:12] CVMFS is ok
[2025-12-12 19:50:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 19:50:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 19:50:12] Further information can be found at the LHC@home message board.
[2025-12-12 19:50:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 19:50:12] Checking for apptainer binary...
[2025-12-12 19:50:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 19:50:12] Running /usr/bin/apptainer --version
[2025-12-12 19:50:12] apptainer version 1.3.2-1.el7
[2025-12-12 19:50:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 19:50:14] c-115-5.aglt2.org
[2025-12-12 19:50:14] apptainer works
[2025-12-12 19:50:14] Set ATHENA_PROC_NUMBER=8
[2025-12-12 19:50:14] Set ATHENA_CORE_NUMBER=8
[2025-12-12 19:50:14] Starting ATLAS job with PandaID=6928799410
[2025-12-12 19:50:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 21:54:51]  *** The last 200 lines of the pilot log: ***
[2025-12-12 21:54:51] 2025-12-13 02:54:00,795 | INFO     | time since job start (7408s) is within the limit (174528.0s)
[2025-12-12 21:54:51] 2025-12-13 02:54:00,880 | INFO     | number of running child processes to parent process 2402: 1
[2025-12-12 21:54:51] 2025-12-13 02:54:00,880 | INFO     | maximum number of monitored processes: 6
[2025-12-12 21:54:51] 2025-12-13 02:54:02,800 | INFO     | time since job start (7410s) is within the limit (174528.0s)
[2025-12-12 21:54:51] 2025-12-13 02:54:03,383 | INFO     | monitor loop #548: job 0:6928799410 is in state 'finished'
[2025-12-12 21:54:51] 2025-12-13 02:54:03,383 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 21:54:51] 2025-12-13 02:54:04,805 | INFO     | time since job start (7412s) is within the limit (174528.0s)
[2025-12-12 21:54:51] 2025-12-13 02:54:05,885 | INFO     | monitor loop #549: job 0:6928799410 is in state 'finished'
[2025-12-12 21:54:51] 2025-12-13 02:54:05,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 21:54:51] 2025-12-13 02:54:05,969 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-12 21:54:51] 2025-12-13 02:54:05,972 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-12-12 21:54:51] 2025-12-13 02:54:05,973 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6928799410/memory_monitor_summary.json (trf name=prmon)
[2025-12-12 21:54:51] 2025-12-13 02:54:05,974 | INFO     | extracted standard info from prmon json
[2025-12-12 21:54:51] 2025-12-13 02:54:05,974 | INFO     | extracted standard memory fields from prmon json
[2025-12-12 21:54:51] 2025-12-13 02:54:05,974 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-12 21:54:51] 2025-12-13 02:54:05,974 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-12 21:54:51] 2025-12-13 02:54:05,974 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-12 21:54:51] 2025-12-13 02:54:05,976 | INFO     | fitting pss+swap vs Time
[2025-12-12 21:54:51] 2025-12-13 02:54:05,977 | INFO     | sum of square deviations: 549294020.0
[2025-12-12 21:54:51] 2025-12-13 02:54:05,978 | INFO     | sum of deviations: 2999546472.999999
[2025-12-12 21:54:51] 2025-12-13 02:54:05,978 | INFO     | mean x: 1765590723.0
[2025-12-12 21:54:51] 2025-12-13 02:54:05,978 | INFO     | mean y: 2504599.305785124
[2025-12-12 21:54:51] 2025-12-13 02:54:05,978 | INFO     | intersect: -9638910076.82007
[2025-12-12 21:54:51] 2025-12-13 02:54:05,978 | INFO     | chi2: 1.5113611364722341
[2025-12-12 21:54:51] 2025-12-13 02:54:05,978 | INFO     | sum of square deviations: 483971865.0
[2025-12-12 21:54:51] 2025-12-13 02:54:05,979 | INFO     | sum of deviations: 3006657548.0000005
[2025-12-12 21:54:51] 2025-12-13 02:54:05,979 | INFO     | mean x: 1765590570.5
[2025-12-12 21:54:51] 2025-12-13 02:54:05,979 | INFO     | mean y: 2504616.1896551726
[2025-12-12 21:54:51] 2025-12-13 02:54:05,979 | INFO     | intersect: -10966162365.043753
[2025-12-12 21:54:51] 2025-12-13 02:54:05,979 | INFO     | chi2: 1.5129970774873958
[2025-12-12 21:54:51] 2025-12-13 02:54:05,980 | INFO     | current chi2=1.5129970774873958 (change=-0.10824289282574645 %)
[2025-12-12 21:54:51] 2025-12-13 02:54:05,980 | INFO     | right removable region: 115
[2025-12-12 21:54:51] 2025-12-13 02:54:05,980 | INFO     | sum of square deviations: 483971865.0
[2025-12-12 21:54:51] 2025-12-13 02:54:05,980 | INFO     | sum of deviations: -13990710449.000002
[2025-12-12 21:54:51] 2025-12-13 02:54:05,981 | INFO     | mean x: 1765590875.5
[2025-12-12 21:54:51] 2025-12-13 02:54:05,981 | INFO     | mean y: 2543457.0689655175
[2025-12-12 21:54:51] 2025-12-13 02:54:05,981 | INFO     | intersect: 51042433369.919395
[2025-12-12 21:54:51] 2025-12-13 02:54:05,981 | INFO     | chi2: 0.10697302367793282
[2025-12-12 21:54:51] 2025-12-13 02:54:05,981 | INFO     | current chi2=0.10697302367793282 (change=92.92207394404586 %)
[2025-12-12 21:54:51] 2025-12-13 02:54:05,981 | INFO     | sum of square deviations: 424045160.0
[2025-12-12 21:54:51] 2025-12-13 02:54:05,982 | INFO     | sum of deviations: -10941874329.000002
[2025-12-12 21:54:51] 2025-12-13 02:54:05,982 | INFO     | mean x: 1765591028.0
[2025-12-12 21:54:51] 2025-12-13 02:54:05,982 | INFO     | mean y: 2535662.6936936937
[2025-12-12 21:54:51] 2025-12-13 02:54:05,982 | INFO     | intersect: 45561068024.63817
[2025-12-12 21:54:51] 2025-12-13 02:54:05,982 | INFO     | chi2: 0.10153705748469567
[2025-12-12 21:54:51] 2025-12-13 02:54:05,983 | INFO     | current chi2=0.10153705748469567 (change=5.0816233909619966 %)
[2025-12-12 21:54:51] 2025-12-13 02:54:05,983 | INFO     | left removable region: 20
[2025-12-12 21:54:51] 2025-12-13 02:54:05,983 | INFO     | sum of square deviations: 265828240.0
[2025-12-12 21:54:51] 2025-12-13 02:54:05,983 | INFO     | sum of deviations: -3308037808.0000005
[2025-12-12 21:54:51] 2025-12-13 02:54:05,983 | INFO     | mean x: 1765591150.0
[2025-12-12 21:54:51] 2025-12-13 02:54:05,983 | INFO     | mean y: 2514450.957894737
[2025-12-12 21:54:51] 2025-12-13 02:54:05,984 | INFO     | intersect: 21974003551.100903
[2025-12-12 21:54:51] 2025-12-13 02:54:05,984 | INFO     | chi2: 0.059572180960210455
[2025-12-12 21:54:51] 2025-12-13 02:54:05,984 | INFO     | current memory leak: -12.44 B/s (using 95 data points, chi2=0.06)
[2025-12-12 21:54:51] 2025-12-13 02:54:05,984 | INFO     | could have reported an average CPU frequency of 2051 MHz (8 samples)
[2025-12-12 21:54:51] 2025-12-13 02:54:05,984 | INFO     | ..............................
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | . Timing measurements:
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | . get job = 0 s
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | . initial setup = 2 s
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | . payload setup = 8 s
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | . stage-in = 0 s
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | . payload execution = 7378 s
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | . stage-out = 0 s
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | . log creation = 0 s
[2025-12-12 21:54:51] 2025-12-13 02:54:05,985 | INFO     | ..............................
[2025-12-12 21:54:51] 2025-12-13 02:54:06,069 | INFO     | 
[2025-12-12 21:54:51] 2025-12-13 02:54:06,069 | INFO     | job summary report
[2025-12-12 21:54:51] 2025-12-13 02:54:06,069 | INFO     | --------------------------------------------------
[2025-12-12 21:54:51] 2025-12-13 02:54:06,069 | INFO     | PanDA job id: 6928799410
[2025-12-12 21:54:51] 2025-12-13 02:54:06,070 | INFO     | task id: 47886831
[2025-12-12 21:54:51] 2025-12-13 02:54:06,070 | INFO     | errors: (none)
[2025-12-12 21:54:51] 2025-12-13 02:54:06,070 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 21:54:51] 2025-12-13 02:54:06,070 | INFO     | pilot state: finished 
[2025-12-12 21:54:51] 2025-12-13 02:54:06,070 | INFO     | transexitcode: 0
[2025-12-12 21:54:51] 2025-12-13 02:54:06,070 | INFO     | exeerrorcode: 0
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | exeerrordiag: 
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | exitcode: 0
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | exitmsg: OK
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | cpuconsumptiontime: 55310 s
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | nevents: 400
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | neventsw: 0
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | pid: 2402
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | pgrp: 2402
[2025-12-12 21:54:51] 2025-12-13 02:54:06,071 | INFO     | corecount: 8
[2025-12-12 21:54:51] 2025-12-13 02:54:06,072 | INFO     | event service: False
[2025-12-12 21:54:51] 2025-12-13 02:54:06,072 | INFO     | sizes: {0: 2283982, 6: 2284244, 11: 2284272, 7391: 2311647, 7392: 2320701, 7397: 2320839}
[2025-12-12 21:54:51] 2025-12-13 02:54:06,072 | INFO     | --------------------------------------------------
[2025-12-12 21:54:51] 2025-12-13 02:54:06,072 | INFO     | 
[2025-12-12 21:54:51] 2025-12-13 02:54:06,072 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-12 21:54:51] 2025-12-13 02:54:06,100 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,101 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,101 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,101 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,101 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,101 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,102 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,102 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,102 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,102 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,102 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,103 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,103 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,103 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,103 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,103 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,103 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,104 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 21:54:51] 2025-12-13 02:54:06,104 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,104 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 21:54:51] 2025-12-13 02:54:06,104 | INFO     | job 6928799410 has completed (purged errors)
[2025-12-12 21:54:51] 2025-12-13 02:54:06,104 | INFO     | overall cleanup function is called
[2025-12-12 21:54:51] 2025-12-13 02:54:07,112 | INFO     | --- collectZombieJob: --- 10, [2402]
[2025-12-12 21:54:51] 2025-12-13 02:54:07,112 | INFO     | zombie collector waiting for pid 2402
[2025-12-12 21:54:51] 2025-12-13 02:54:07,112 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 21:54:51] 2025-12-13 02:54:07,112 | INFO     | collected zombie processes
[2025-12-12 21:54:51] 2025-12-13 02:54:07,112 | INFO     | will attempt to kill all subprocesses of pid=2402
[2025-12-12 21:54:51] 2025-12-13 02:54:07,199 | INFO     | process IDs to be killed: [2402] (in reverse order)
[2025-12-12 21:54:51] 2025-12-13 02:54:07,255 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 21:54:51] 2025-12-13 02:54:07,255 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 21:54:51] 2025-12-13 02:54:07,259 | INFO     | did not find any defunct processes belonging to 2402
[2025-12-12 21:54:51] 2025-12-13 02:54:07,262 | INFO     | did not find any defunct processes belonging to 2402
[2025-12-12 21:54:51] 2025-12-13 02:54:07,263 | INFO     | ready for new job
[2025-12-12 21:54:51] 2025-12-13 02:54:07,263 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 21:54:51] 2025-12-13 02:54:07,264 | INFO     | ***************************************
[2025-12-12 21:54:51] 2025-12-13 02:54:07,264 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 21:54:51] 2025-12-13 02:54:07,264 | INFO     | ***************************************
[2025-12-12 21:54:51] 2025-12-13 02:54:07,264 | INFO     | 
[2025-12-12 21:54:51] 2025-12-13 02:54:07,265 | INFO     | architecture information:
[2025-12-12 21:54:51] 2025-12-13 02:54:07,266 | INFO     | executing command: cat /etc/os-release
[2025-12-12 21:54:51] 2025-12-13 02:54:07,283 | INFO     | cat /etc/os-release:
[2025-12-12 21:54:51] NAME="CentOS Linux"
[2025-12-12 21:54:51] VERSION="7 (Core)"
[2025-12-12 21:54:51] ID="centos"
[2025-12-12 21:54:51] ID_LIKE="rhel fedora"
[2025-12-12 21:54:51] VERSION_ID="7"
[2025-12-12 21:54:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 21:54:51] ANSI_COLOR="0;31"
[2025-12-12 21:54:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 21:54:51] HOME_URL="https://www.centos.org/"
[2025-12-12 21:54:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 21:54:51] 
[2025-12-12 21:54:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 21:54:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 21:54:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 21:54:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 21:54:51] 
[2025-12-12 21:54:51] 2025-12-13 02:54:07,284 | INFO     | ***************************************
[2025-12-12 21:54:51] 2025-12-13 02:54:07,787 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-12 21:54:51] 2025-12-13 02:54:07,807 | INFO     | sufficient remaining disk space (18674089984 B)
[2025-12-12 21:54:51] 2025-12-13 02:54:07,807 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 21:54:51] 2025-12-13 02:54:07,808 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 21:54:51] 2025-12-13 02:54:07,808 | INFO     | update_server=False
[2025-12-12 21:54:51] 2025-12-13 02:54:07,808 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 21:54:51] 2025-12-13 02:54:07,809 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 21:54:51] 2025-12-13 02:54:07,809 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 21:54:51] 2025-12-13 02:54:07,809 | INFO     | aborting loop
[2025-12-12 21:54:51] 2025-12-13 02:54:07,913 | INFO     | all job control threads have been joined
[2025-12-12 21:54:51] 2025-12-13 02:54:08,246 | INFO     | all data control threads have been joined
[2025-12-12 21:54:51] 2025-12-13 02:54:08,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 21:54:51] 2025-12-13 02:54:08,542 | INFO     | all payload control threads have been joined
[2025-12-12 21:54:51] 2025-12-13 02:54:08,811 | INFO     | [job] job monitor thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:08,814 | INFO     | [job] retrieve thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:08,815 | INFO     | [job] queue monitor thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:08,880 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:08,919 | INFO     | [job] control thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:09,252 | INFO     | [data] control thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:09,521 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:09,546 | INFO     | [payload] control thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:09,988 | INFO     | [data] copytool_in thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:10,012 | INFO     | [job] validate thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:10,012 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:10,203 | INFO     | [payload] validate_post thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:10,289 | INFO     | [payload] failed_post thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:10,470 | INFO     | [data] copytool_out thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:11,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 21:54:51] 2025-12-13 02:54:15,058 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:18,212 | INFO     | job.realtimelogging is not enabled
[2025-12-12 21:54:51] 2025-12-13 02:54:19,217 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 21:54:51] 2025-12-13 02:54:37,926 | INFO     | PID=28318 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-12 21:54:51] 2025-12-13 02:54:37,927 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 21:54:51] 2025-12-13 02:54:37,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 21:54:51] 2025-12-13 02:54:37,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 21:54:51] 2025-12-13 02:54:43,861 | INFO     | [monitor] cgroup control has ended
[2025-12-12 21:54:51] 2025-12-13 02:54:45,896 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139656314464064)>', '<ExcThread(monitor, started 139655391459072)>']
[2025-12-12 21:54:51] 2025-12-13 02:54:45,955 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 21:54:51] 2025-12-13 02:54:45,956 | INFO     | [monitor] control thread has ended
[2025-12-12 21:54:51] 2025-12-13 02:54:50,921 | INFO     | all workflow threads have been joined
[2025-12-12 21:54:51] 2025-12-13 02:54:50,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 21:54:51] 2025-12-13 02:54:50,922 | INFO     | traces error code: 0
[2025-12-12 21:54:51] 2025-12-13 02:54:50,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 21:54:51] 2025-12-13 02:54:51,017 [wrapper] ==== pilot stdout END ====
[2025-12-12 21:54:51] 2025-12-13 02:54:51,022 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 21:54:51] 2025-12-13 02:54:51,026 [wrapper] pilotpid: 28318
[2025-12-12 21:54:51] 2025-12-13 02:54:51,031 [wrapper] Pilot exit status: 0
[2025-12-12 21:54:51] 2025-12-13 02:54:51,050 [wrapper] pandaids: 6928799410
[2025-12-12 21:54:51] 2025-12-13 02:54:51,090 [wrapper] cleanup supervisor_pilot 25495 28319
[2025-12-12 21:54:51] 2025-12-13 02:54:51,096 [wrapper] Test setup, not cleaning
[2025-12-12 21:54:51] 2025-12-13 02:54:51,101 [wrapper] apfmon messages muted
[2025-12-12 21:54:51] 2025-12-13 02:54:51,106 [wrapper] ==== wrapper stdout END ====
[2025-12-12 21:54:51] 2025-12-13 02:54:51,111 [wrapper] ==== wrapper stderr END ====
[2025-12-12 21:54:51]  *** Error codes and diagnostics ***
[2025-12-12 21:54:51]     "exeErrorCode": 0,
[2025-12-12 21:54:51]     "exeErrorDiag": "",
[2025-12-12 21:54:51]     "pilotErrorCode": 0,
[2025-12-12 21:54:51]     "pilotErrorDiag": "",
[2025-12-12 21:54:51]  *** Listing of results directory ***
[2025-12-12 21:54:51] total 340308
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas    579449 Dec 12 19:42 pilot3.tar.gz
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas      5112 Dec 12 19:49 queuedata.json
[2025-12-12 21:54:51] -rwx------ 1 boincer umatlas     36322 Dec 12 19:49 runpilot2-wrapper.sh
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas       100 Dec 12 19:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 21:54:51] -rwxr-xr-x 1 boincer umatlas      7986 Dec 12 19:50 run_atlas
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas       105 Dec 12 19:50 job.xml
[2025-12-12 21:54:51] -rw-r--r-- 2 boincer umatlas 193903935 Dec 12 19:50 EVNT.47886829._000021.pool.root.1
[2025-12-12 21:54:51] -rw-r--r-- 2 boincer umatlas     15847 Dec 12 19:50 start_atlas.sh
[2025-12-12 21:54:51] drwxrwx--x 2 boincer umatlas      4096 Dec 12 19:50 shared
[2025-12-12 21:54:51] -rw-r--r-- 2 boincer umatlas    592408 Dec 12 19:50 input.tar.gz
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas         0 Dec 12 19:50 boinc_lockfile
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas      2533 Dec 12 19:50 pandaJob.out
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas        57 Dec 12 19:50 setup.sh.local
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas    991720 Dec 12 19:50 agis_schedconf.cvmfs.json
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas   1516240 Dec 12 19:50 agis_ddmendpoints.agis.ALL.json
[2025-12-12 21:54:51] drwx------ 5 boincer umatlas      4096 Dec 12 19:50 pilot3
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas      5908 Dec 12 21:45 init_data.xml
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas 147833214 Dec 12 21:53 HITS.47886831._000434.pool.root.1
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas       530 Dec 12 21:53 boinc_task_state.xml
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas      1049 Dec 12 21:53 memory_monitor_summary.json
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas    360851 Dec 12 21:54 log.47886831._000434.job.log.tgz.1
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas      7840 Dec 12 21:54 heartbeat.json
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas        95 Dec 12 21:54 pilot_heartbeat.json
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas      8192 Dec 12 21:54 boinc_mmap_file
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas        27 Dec 12 21:54 wrapper_checkpoint.txt
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas      4818 Dec 12 21:54 pilotlog.txt
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas   1045663 Dec 12 21:54 log.47886831._000434.job.log.1
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas       357 Dec 12 21:54 output.list
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas       620 Dec 12 21:54 runtime_log
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas   1423360 Dec 12 21:54 result.tar.gz
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas      9337 Dec 12 21:54 runtime_log.err
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas       658 Dec 12 21:54 roTKDmV0So8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsRNKDmiffL8n.diag
[2025-12-12 21:54:51] -rw-r--r-- 1 boincer umatlas     21227 Dec 12 21:54 stderr.txt
[2025-12-12 21:54:51] HITS file was successfully produced:
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas 147833214 Dec 12 21:53 shared/HITS.pool.root.1
[2025-12-12 21:54:51]  *** Contents of shared directory: ***
[2025-12-12 21:54:51] total 335728
[2025-12-12 21:54:51] -rw-r--r-- 2 boincer umatlas 193903935 Dec 12 19:50 ATLAS.root_0
[2025-12-12 21:54:51] -rw-r--r-- 2 boincer umatlas     15847 Dec 12 19:50 start_atlas.sh
[2025-12-12 21:54:51] -rw-r--r-- 2 boincer umatlas    592408 Dec 12 19:50 input.tar.gz
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas 147833214 Dec 12 21:53 HITS.pool.root.1
[2025-12-12 21:54:51] -rw------- 1 boincer umatlas   1423360 Dec 12 21:54 result.tar.gz
21:54:53 (24525): run_atlas exited; CPU time 55235.308718
21:54:53 (24525): called boinc_finish(0)

</stderr_txt>
]]>

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