Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:48:59 (3436312): wrapper (7.7.26015): starting
18:48:59 (3436312): wrapper: running run_atlas (--nthreads 12)
[2025-12-12 18:48:59] Arguments: --nthreads 12
[2025-12-12 18:48:59] Threads: 12
[2025-12-12 18:48:59] Checking for CVMFS
[2025-12-12 18:49:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 18:49:01] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 18:49:01] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 18:49:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 18:49:02] 2.13.3.0 11561 52074 318340 153941 1 383 31631777 32935937 25623 16776704 0 252300874 99.732 169151627 32381 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-12 18:49:02] CVMFS is ok
[2025-12-12 18:49:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 18:49:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 18:49:02] Further information can be found at the LHC@home message board.
[2025-12-12 18:49:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 18:49:02] Checking for apptainer binary...
[2025-12-12 18:49:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 18:49:02] Running /usr/bin/apptainer --version
[2025-12-12 18:49:02] apptainer version 1.4.4-1.el9
[2025-12-12 18:49:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 18:49:03] c-8-14.aglt2.org
[2025-12-12 18:49:03] apptainer works
[2025-12-12 18:49:03] Set ATHENA_PROC_NUMBER=12
[2025-12-12 18:49:03] Set ATHENA_CORE_NUMBER=12
[2025-12-12 18:49:03] Starting ATLAS job with PandaID=6928768444
[2025-12-12 18:49:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 06:10:56]  *** The last 200 lines of the pilot log: ***
[2025-12-13 06:10:56] 2025-12-13 05:32:43,654 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 06:10:56] 2025-12-13 05:32:43,716 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1600000000008
[2025-12-13 06:10:56] 2025-12-13 05:32:43,929 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6928768444/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 06:10:56] 2025-12-13 05:32:43,930 | INFO     | extracted standard info from prmon json
[2025-12-13 06:10:56] 2025-12-13 05:32:43,930 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 06:10:56] 2025-12-13 05:32:43,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 06:10:56] 2025-12-13 05:32:43,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-13 06:10:56] 2025-12-13 05:32:43,930 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-13 06:10:56] 2025-12-13 05:32:44,007 | INFO     | fitting pss+swap vs Time
[2025-12-13 06:10:56] 2025-12-13 05:32:44,008 | INFO     | sum of square deviations: 11659554252.72842
[2025-12-13 06:10:56] 2025-12-13 05:32:44,026 | INFO     | sum of deviations: -6353785214.197063
[2025-12-13 06:10:56] 2025-12-13 05:32:44,027 | INFO     | mean x: 1765593691.644776
[2025-12-13 06:10:56] 2025-12-13 05:32:44,027 | INFO     | mean y: 2642474.973134328
[2025-12-13 06:10:56] 2025-12-13 05:32:44,027 | INFO     | intersect: 964789298.8645405
[2025-12-13 06:10:56] 2025-12-13 05:32:44,028 | INFO     | chi2: 3.9111241747623056
[2025-12-13 06:10:56] 2025-12-13 05:32:44,028 | INFO     | sum of square deviations: 11145448775.163671
[2025-12-13 06:10:56] 2025-12-13 05:32:44,164 | INFO     | sum of deviations: 42378565063.72728
[2025-12-13 06:10:56] 2025-12-13 05:32:44,177 | INFO     | mean x: 1765593539.1636364
[2025-12-13 06:10:56] 2025-12-13 05:32:44,177 | INFO     | mean y: 2656800.0606060605
[2025-12-13 06:10:56] 2025-12-13 05:32:44,177 | INFO     | intersect: -6710695186.472023
[2025-12-13 06:10:56] 2025-12-13 05:32:44,178 | INFO     | chi2: 2.287335536726083
[2025-12-13 06:10:56] 2025-12-13 05:32:44,178 | INFO     | current chi2=2.287335536726083 (change=41.51718445847879 %)
[2025-12-13 06:10:56] 2025-12-13 05:32:44,178 | INFO     | sum of square deviations: 10646551028.769175
[2025-12-13 06:10:56] 2025-12-13 05:32:44,285 | INFO     | sum of deviations: 42249482725.18462
[2025-12-13 06:10:56] 2025-12-13 05:32:44,286 | INFO     | mean x: 1765593386.6615384
[2025-12-13 06:10:56] 2025-12-13 05:32:44,300 | INFO     | mean y: 2656760.510769231
[2025-12-13 06:10:56] 2025-12-13 05:32:44,300 | INFO     | intersect: -7003875879.767262
[2025-12-13 06:10:56] 2025-12-13 05:32:44,300 | INFO     | chi2: 2.2882464725080034
[2025-12-13 06:10:56] 2025-12-13 05:32:44,301 | INFO     | current chi2=2.2882464725080034 (change=-0.03982519255676975 %)
[2025-12-13 06:10:56] 2025-12-13 05:32:44,301 | INFO     | right removable region: 324
[2025-12-13 06:10:56] 2025-12-13 05:32:44,301 | INFO     | sum of square deviations: 11145153286.49693
[2025-12-13 06:10:56] 2025-12-13 05:32:44,350 | INFO     | sum of deviations: -80755845681.88486
[2025-12-13 06:10:56] 2025-12-13 05:32:44,350 | INFO     | mean x: 1765593844.169697
[2025-12-13 06:10:56] 2025-12-13 05:32:44,351 | INFO     | mean y: 2664438.0515151517
[2025-12-13 06:10:56] 2025-12-13 05:32:44,453 | INFO     | intersect: 12795850888.82929
[2025-12-13 06:10:56] 2025-12-13 05:32:44,453 | INFO     | chi2: 1.9070957349576763
[2025-12-13 06:10:56] 2025-12-13 05:32:44,454 | INFO     | current chi2=1.9070957349576763 (change=51.23919237175388 %)
[2025-12-13 06:10:56] 2025-12-13 05:32:44,454 | INFO     | sum of square deviations: 10646101444.843077
[2025-12-13 06:10:56] 2025-12-13 05:32:44,535 | INFO     | sum of deviations: -89007642170.44003
[2025-12-13 06:10:56] 2025-12-13 05:32:44,535 | INFO     | mean x: 1765593996.6953845
[2025-12-13 06:10:56] 2025-12-13 05:32:44,535 | INFO     | mean y: 2666947.44
[2025-12-13 06:10:56] 2025-12-13 05:32:44,536 | INFO     | intersect: 14764066647.633848
[2025-12-13 06:10:56] 2025-12-13 05:32:44,536 | INFO     | chi2: 1.8675177211575624
[2025-12-13 06:10:56] 2025-12-13 05:32:44,536 | INFO     | current chi2=1.8675177211575624 (change=2.0753029370595377 %)
[2025-12-13 06:10:56] 2025-12-13 05:32:44,536 | INFO     | left removable region: 20
[2025-12-13 06:10:56] 2025-12-13 05:32:44,537 | INFO     | sum of square deviations: 8713246749.671072
[2025-12-13 06:10:56] 2025-12-13 05:32:44,562 | INFO     | sum of deviations: -6948976341.868415
[2025-12-13 06:10:56] 2025-12-13 05:32:44,562 | INFO     | mean x: 1765593966.2171052
[2025-12-13 06:10:56] 2025-12-13 05:32:44,562 | INFO     | mean y: 2671438.013157895
[2025-12-13 06:10:56] 2025-12-13 05:32:44,563 | INFO     | intersect: 1410765464.6228652
[2025-12-13 06:10:56] 2025-12-13 05:32:44,563 | INFO     | chi2: 0.06585584950391465
[2025-12-13 06:10:56] 2025-12-13 05:32:44,563 | INFO     | current memory leak: -0.80 B/s (using 304 data points, chi2=0.07)
[2025-12-13 06:10:56] 2025-12-13 05:32:44,564 | INFO     | could have reported an average CPU frequency of 2600 MHz (15 samples)
[2025-12-13 06:10:56] 2025-12-13 05:32:44,564 | INFO     | ..............................
[2025-12-13 06:10:56] 2025-12-13 05:32:44,564 | INFO     | . Timing measurements:
[2025-12-13 06:10:56] 2025-12-13 05:32:44,564 | INFO     | . get job = 0 s
[2025-12-13 06:10:56] 2025-12-13 05:32:44,564 | INFO     | . initial setup = 4 s
[2025-12-13 06:10:56] 2025-12-13 05:32:44,564 | INFO     | . payload setup = 29 s
[2025-12-13 06:10:56] 2025-12-13 05:32:44,565 | INFO     | . stage-in = 0 s
[2025-12-13 06:10:56] 2025-12-13 05:32:44,565 | INFO     | . payload execution = 20412 s
[2025-12-13 06:10:56] 2025-12-13 05:32:44,565 | INFO     | . stage-out = 10 s
[2025-12-13 06:10:56] 2025-12-13 05:32:44,565 | INFO     | . log creation = 1 s
[2025-12-13 06:10:56] 2025-12-13 05:32:44,565 | INFO     | ..............................
[2025-12-13 06:10:56] 2025-12-13 05:32:46,828 | INFO     | 
[2025-12-13 06:10:56] 2025-12-13 05:32:46,828 | INFO     | job summary report
[2025-12-13 06:10:56] 2025-12-13 05:32:46,828 | INFO     | --------------------------------------------------
[2025-12-13 06:10:56] 2025-12-13 05:32:46,828 | INFO     | PanDA job id: 6928768444
[2025-12-13 06:10:56] 2025-12-13 05:32:46,828 | INFO     | task id: 47886831
[2025-12-13 06:10:56] 2025-12-13 05:32:46,828 | INFO     | errors: (none)
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | pilot state: finished 
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | transexitcode: 0
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | exeerrorcode: 0
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | exeerrordiag: 
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | exitcode: 0
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | exitmsg: OK
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | cpuconsumptiontime: 50836 s
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | nevents: 400
[2025-12-13 06:10:56] 2025-12-13 05:32:46,829 | INFO     | neventsw: 0
[2025-12-13 06:10:56] 2025-12-13 05:32:46,830 | INFO     | pid: 3455991
[2025-12-13 06:10:56] 2025-12-13 05:32:46,830 | INFO     | pgrp: 3455991
[2025-12-13 06:10:56] 2025-12-13 05:32:46,830 | INFO     | corecount: 12
[2025-12-13 06:10:56] 2025-12-13 05:32:46,830 | INFO     | event service: False
[2025-12-13 06:10:56] 2025-12-13 05:32:46,830 | INFO     | sizes: {0: 2283757, 1: 2284012, 2: 2284040, 13: 2284040, 24: 2284386, 35: 2284386, 20447: 2317127, 20448: 2317126, 20460: 2326180, 20464: 2326236, 20522: 2326430}
[2025-12-13 06:10:56] 2025-12-13 05:32:46,830 | INFO     | --------------------------------------------------
[2025-12-13 06:10:56] 2025-12-13 05:32:47,137 | INFO     | 
[2025-12-13 06:10:56] 2025-12-13 05:32:47,137 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-13 06:10:56] 2025-12-13 05:32:47,531 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,531 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,532 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,532 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,532 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,532 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,532 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,532 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,532 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,532 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,533 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,533 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,533 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,533 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,533 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,533 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,533 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,533 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 06:10:56] 2025-12-13 05:32:47,669 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,669 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 06:10:56] 2025-12-13 05:32:47,669 | INFO     | job 6928768444 has completed (purged errors)
[2025-12-13 06:10:56] 2025-12-13 05:32:47,670 | INFO     | overall cleanup function is called
[2025-12-13 06:10:56] 2025-12-13 05:32:48,792 | INFO     | --- collectZombieJob: --- 10, [3455991]
[2025-12-13 06:10:56] 2025-12-13 05:32:48,792 | INFO     | zombie collector waiting for pid 3455991
[2025-12-13 06:10:56] 2025-12-13 05:32:48,792 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 06:10:56] 2025-12-13 05:32:48,792 | INFO     | collected zombie processes
[2025-12-13 06:10:56] 2025-12-13 05:32:48,792 | INFO     | will attempt to kill all subprocesses of pid=3455991
[2025-12-13 06:10:56] 2025-12-13 05:32:50,598 | INFO     | PID=3440613 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 06:10:56] 2025-12-13 05:32:50,598 | INFO     | .. there are 35 such processes running
[2025-12-13 06:10:56] 2025-12-13 05:32:50,835 | INFO     | process IDs to be killed: [3455991] (in reverse order)
[2025-12-13 06:10:56] 2025-12-13 05:32:51,236 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 06:10:56] 2025-12-13 05:32:51,236 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 06:10:56] 2025-12-13 05:32:51,355 | INFO     | did not find any defunct processes belonging to 3455991
[2025-12-13 06:10:56] 2025-12-13 05:32:51,371 | INFO     | did not find any defunct processes belonging to 3455991
[2025-12-13 06:10:56] 2025-12-13 05:32:51,371 | INFO     | ready for new job
[2025-12-13 06:10:56] 2025-12-13 05:32:51,372 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 06:10:56] 2025-12-13 05:32:51,374 | INFO     | ***************************************
[2025-12-13 06:10:56] 2025-12-13 05:32:51,374 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 06:10:56] 2025-12-13 05:32:51,374 | INFO     | ***************************************
[2025-12-13 06:10:56] 2025-12-13 05:32:51,374 | INFO     | 
[2025-12-13 06:10:56] 2025-12-13 05:32:51,376 | INFO     | architecture information:
[2025-12-13 06:10:56] 2025-12-13 05:32:51,377 | INFO     | executing command: cat /etc/os-release
[2025-12-13 06:10:56] 2025-12-13 05:32:51,396 | INFO     | cat /etc/os-release:
[2025-12-13 06:10:56] NAME="CentOS Linux"
[2025-12-13 06:10:56] VERSION="7 (Core)"
[2025-12-13 06:10:56] ID="centos"
[2025-12-13 06:10:56] ID_LIKE="rhel fedora"
[2025-12-13 06:10:56] VERSION_ID="7"
[2025-12-13 06:10:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 06:10:56] ANSI_COLOR="0;31"
[2025-12-13 06:10:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 06:10:56] HOME_URL="https://www.centos.org/"
[2025-12-13 06:10:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 06:10:56] 
[2025-12-13 06:10:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 06:10:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 06:10:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 06:10:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 06:10:56] 
[2025-12-13 06:10:56] 2025-12-13 05:32:51,396 | INFO     | ***************************************
[2025-12-13 06:10:56] 2025-12-13 05:32:51,900 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-13 06:10:56] 2025-12-13 05:32:52,049 | INFO     | sufficient remaining disk space (75355914240 B)
[2025-12-13 06:10:56] 2025-12-13 05:32:52,049 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 06:10:56] 2025-12-13 05:32:52,050 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 06:10:56] 2025-12-13 05:32:52,050 | INFO     | update_server=False
[2025-12-13 06:10:56] 2025-12-13 05:32:52,050 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 06:10:56] 2025-12-13 05:32:52,050 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:10:56] 2025-12-13 05:32:52,050 | INFO     | aborting loop
[2025-12-13 06:10:56] 2025-12-13 05:32:52,050 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 06:10:56] 2025-12-13 05:32:52,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 06:10:56] 2025-12-13 05:32:52,242 | INFO     | all data control threads have been joined
[2025-12-13 06:10:56] 2025-12-13 05:32:52,558 | INFO     | all payload control threads have been joined
[2025-12-13 06:10:56] 2025-12-13 05:32:53,072 | INFO     | [job] retrieve thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,072 | INFO     | [job] job monitor thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,075 | INFO     | all job control threads have been joined
[2025-12-13 06:10:56] 2025-12-13 05:32:53,080 | INFO     | [job] queue monitor thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,138 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,150 | INFO     | [payload] validate_post thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,156 | INFO     | [data] copytool_in thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,170 | INFO     | [job] validate thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,248 | INFO     | [data] control thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,344 | INFO     | [payload] failed_post thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,569 | INFO     | [payload] control thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:53,699 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 06:10:56] 2025-12-13 05:32:54,081 | INFO     | [job] control thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:54,084 | INFO     | [data] copytool_out thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:54,553 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:54,559 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:32:57,733 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 06:10:56] 2025-12-13 05:33:26,252 | INFO     | [monitor] cgroup control has ended
[2025-12-13 06:10:56] 2025-12-13 05:33:26,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139661400377152)>', '<ExcThread(monitor, started 139660894385920)>']
[2025-12-13 06:10:56] 2025-12-13 05:33:30,129 | INFO     | PID=3440613 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-13 06:10:56] 2025-12-13 05:33:30,181 | INFO     | .. there are 35 such processes running
[2025-12-13 06:10:56] 2025-12-13 05:33:30,181 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 06:10:56] 2025-12-13 05:33:30,181 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 06:10:56] 2025-12-13 05:33:30,181 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 06:10:56] 2025-12-13 05:33:30,181 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 06:10:56] 2025-12-13 05:33:30,181 | INFO     | [monitor] control thread has ended
[2025-12-13 06:10:56] 2025-12-13 05:33:31,487 | INFO     | all workflow threads have been joined
[2025-12-13 06:10:56] 2025-12-13 05:33:31,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 06:10:56] 2025-12-13 05:33:31,487 | INFO     | traces error code: 0
[2025-12-13 06:10:56] 2025-12-13 05:33:31,487 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 06:10:56] 2025-12-13 05:33:33,657 [wrapper] ==== pilot stdout END ====
[2025-12-13 06:10:56] 2025-12-13 05:33:33,709 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 06:10:56] 2025-12-13 05:33:33,762 [wrapper] pilotpid: 3440613
[2025-12-13 06:10:56] 2025-12-13 05:33:33,914 [wrapper] Pilot exit status: 0
[2025-12-13 06:10:56] 2025-12-13 05:33:34,145 [wrapper] pandaids: 6928768444
[2025-12-13 06:10:56] 2025-12-13 05:33:34,890 [wrapper] cleanup supervisor_pilot  224736 3440614
[2025-12-13 06:10:56] 2025-12-13 05:33:34,939 [wrapper] Test setup, not cleaning
[2025-12-13 06:10:56] 2025-12-13 05:33:34,943 [wrapper] apfmon messages muted
[2025-12-13 06:10:56] 2025-12-13 05:33:34,946 [wrapper] ==== wrapper stdout END ====
[2025-12-13 06:10:56] 2025-12-13 05:33:34,949 [wrapper] ==== wrapper stderr END ====
[2025-12-13 06:10:56]  *** Error codes and diagnostics ***
[2025-12-13 06:10:56]     "exeErrorCode": 0,
[2025-12-13 06:10:56]     "exeErrorDiag": "",
[2025-12-13 06:10:56]     "pilotErrorCode": 0,
[2025-12-13 06:10:56]     "pilotErrorDiag": "",
[2025-12-13 06:10:56]  *** Listing of results directory ***
[2025-12-13 06:10:56] total 338568
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas    579449 Dec 12 18:46 pilot3.tar.gz
[2025-12-13 06:10:56] -rwx------. 1 boincer umatlas     36322 Dec 12 18:48 runpilot2-wrapper.sh
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas      5112 Dec 12 18:48 queuedata.json
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas       100 Dec 12 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 06:10:56] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 12 18:48 run_atlas
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas       105 Dec 12 18:48 job.xml
[2025-12-13 06:10:56] -rw-r--r--. 2 boincer umatlas 191149243 Dec 12 18:48 EVNT.47886829._000017.pool.root.1
[2025-12-13 06:10:56] -rw-r--r--. 2 boincer umatlas     15847 Dec 12 18:48 start_atlas.sh
[2025-12-13 06:10:56] drwxrwx--x. 2 boincer umatlas      4096 Dec 12 18:48 shared
[2025-12-13 06:10:56] -rw-r--r--. 2 boincer umatlas    592393 Dec 12 18:48 input.tar.gz
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas         0 Dec 12 18:48 boinc_lockfile
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas      2538 Dec 12 18:49 pandaJob.out
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas        57 Dec 12 18:49 setup.sh.local
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas    991720 Dec 12 18:49 agis_schedconf.cvmfs.json
[2025-12-13 06:10:56] drwx------. 5 boincer umatlas      4096 Dec 12 18:49 pilot3
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas 146092608 Dec 13 00:29 HITS.47886831._000351.pool.root.1
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas       531 Dec 13 00:30 boinc_task_state.xml
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas      1039 Dec 13 00:31 memory_monitor_summary.json
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas   1516240 Dec 13 00:31 agis_ddmendpoints.agis.ALL.json
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas    548783 Dec 13 00:31 log.47886831._000351.job.log.tgz.1
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas      7816 Dec 13 00:32 heartbeat.json
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas        95 Dec 13 00:32 pilot_heartbeat.json
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas      4824 Dec 13 00:33 pilotlog.txt
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas   2213341 Dec 13 00:33 log.47886831._000351.job.log.1
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas       357 Dec 13 00:33 output.list
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas       620 Dec 13 00:33 runtime_log
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas   2785280 Dec 13 00:33 result.tar.gz
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas      9335 Dec 13 00:33 runtime_log.err
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas       655 Dec 13 00:33 NxwLDmE3Ro8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdRNKDmpWwFMn.diag
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas      6660 Dec 13 06:10 init_data.xml
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas      8192 Dec 13 06:10 boinc_mmap_file
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas        28 Dec 13 06:10 wrapper_checkpoint.txt
[2025-12-13 06:10:56] -rw-r--r--. 1 boincer umatlas     21306 Dec 13 06:10 stderr.txt
[2025-12-13 06:10:56] HITS file was successfully produced:
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas 146092608 Dec 13 00:29 shared/HITS.pool.root.1
[2025-12-13 06:10:56]  *** Contents of shared directory: ***
[2025-12-13 06:10:56] total 332668
[2025-12-13 06:10:56] -rw-r--r--. 2 boincer umatlas 191149243 Dec 12 18:48 ATLAS.root_0
[2025-12-13 06:10:56] -rw-r--r--. 2 boincer umatlas     15847 Dec 12 18:48 start_atlas.sh
[2025-12-13 06:10:56] -rw-r--r--. 2 boincer umatlas    592393 Dec 12 18:48 input.tar.gz
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas 146092608 Dec 13 00:29 HITS.pool.root.1
[2025-12-13 06:10:56] -rw-------. 1 boincer umatlas   2785280 Dec 13 00:33 result.tar.gz
06:10:58 (3436312): run_atlas exited; CPU time 51484.616474
06:10:58 (3436312): called boinc_finish(0)

</stderr_txt>
]]>

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