Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:10:24 (3503878): wrapper (7.7.26015): starting
20:10:24 (3503878): wrapper: running run_atlas (--nthreads 8)
[2025-12-12 20:10:24] Arguments: --nthreads 8
[2025-12-12 20:10:24] Threads: 8
[2025-12-12 20:10:24] Checking for CVMFS
[2025-12-12 20:10:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 20:10:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 20:10:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 20:10:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 20:10:25] 2.13.3.0 8702 53714 388212 153942 0 450 12741560 21042177 22391 16776704 0 222126277 99.393 321468306 32111 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-12 20:10:25] CVMFS is ok
[2025-12-12 20:10:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 20:10:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 20:10:25] Further information can be found at the LHC@home message board.
[2025-12-12 20:10:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 20:10:25] Checking for apptainer binary...
[2025-12-12 20:10:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 20:10:25] Running /usr/bin/apptainer --version
[2025-12-12 20:10:27] apptainer version 1.4.4-1.el9
[2025-12-12 20:10:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 20:10:28] c-16-12.aglt2.org
[2025-12-12 20:10:28] apptainer works
[2025-12-12 20:10:28] Set ATHENA_PROC_NUMBER=8
[2025-12-12 20:10:28] Set ATHENA_CORE_NUMBER=8
[2025-12-12 20:10:28] Starting ATLAS job with PandaID=6928559583
[2025-12-12 20:10:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 00:04:09]  *** The last 200 lines of the pilot log: ***
[2025-12-14 00:04:09] 2025-12-14 05:03:25,843 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 00:04:09] 2025-12-14 05:03:25,995 | INFO     | time since job start (100337s) is within the limit (174528.0s)
[2025-12-14 00:04:09] 2025-12-14 05:03:28,055 | INFO     | time since job start (100340s) is within the limit (174528.0s)
[2025-12-14 00:04:09] 2025-12-14 05:03:28,349 | INFO     | monitor loop #3504: job 0:6928559583 is in state 'finished'
[2025-12-14 00:04:09] 2025-12-14 05:03:28,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 00:04:09] 2025-12-14 05:03:29,279 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-14 00:04:09] 2025-12-14 05:03:29,323 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.8594249999996
[2025-12-14 00:04:09] 2025-12-14 05:03:29,366 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6928559583/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 00:04:09] 2025-12-14 05:03:29,476 | INFO     | extracted standard info from prmon json
[2025-12-14 00:04:09] 2025-12-14 05:03:29,476 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 00:04:09] 2025-12-14 05:03:29,476 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 00:04:09] 2025-12-14 05:03:29,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 00:04:09] 2025-12-14 05:03:29,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 00:04:09] 2025-12-14 05:03:29,916 | INFO     | fitting pss+swap vs Time
[2025-12-14 00:04:09] 2025-12-14 05:03:29,923 | INFO     | sum of square deviations: 1375266959660.673
[2025-12-14 00:04:09] 2025-12-14 05:03:30,159 | INFO     | time since job start (100342s) is within the limit (174528.0s)
[2025-12-14 00:04:09] 2025-12-14 05:03:30,513 | INFO     | sum of deviations: 273966142962.66895
[2025-12-14 00:04:09] 2025-12-14 05:03:30,513 | INFO     | mean x: 1765638425.7748022
[2025-12-14 00:04:09] 2025-12-14 05:03:30,513 | INFO     | mean y: 2506198.3639683505
[2025-12-14 00:04:09] 2025-12-14 05:03:30,513 | INFO     | intersect: -349225620.6681367
[2025-12-14 00:04:09] 2025-12-14 05:03:30,526 | INFO     | chi2: 3.2049603410953624
[2025-12-14 00:04:09] 2025-12-14 05:03:30,528 | INFO     | sum of square deviations: 1362749909377.0542
[2025-12-14 00:04:09] 2025-12-14 05:03:31,133 | INFO     | monitor loop #3505: job 0:6928559583 is in state 'finished'
[2025-12-14 00:04:09] 2025-12-14 05:03:31,133 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-14 00:04:09] 2025-12-14 05:03:31,140 | INFO     | sum of deviations: 377327101593.3065
[2025-12-14 00:04:09] 2025-12-14 05:03:31,140 | INFO     | mean x: 1765638273.2783883
[2025-12-14 00:04:09] 2025-12-14 05:03:31,141 | INFO     | mean y: 2507454.5256410255
[2025-12-14 00:04:09] 2025-12-14 05:03:31,141 | INFO     | intersect: -486374010.46956956
[2025-12-14 00:04:09] 2025-12-14 05:03:31,143 | INFO     | chi2: 2.513433601155407
[2025-12-14 00:04:09] 2025-12-14 05:03:31,143 | INFO     | current chi2=2.513433601155407 (change=21.576764338482015 %)
[2025-12-14 00:04:09] 2025-12-14 05:03:31,143 | INFO     | right removable region: 1637
[2025-12-14 00:04:09] 2025-12-14 05:03:31,146 | INFO     | sum of square deviations: 1362748530893.94
[2025-12-14 00:04:09] 2025-12-14 05:03:31,228 | INFO     | sum of deviations: -103494551934.25024
[2025-12-14 00:04:09] 2025-12-14 05:03:31,229 | INFO     | mean x: 1765638578.2796092
[2025-12-14 00:04:09] 2025-12-14 05:03:31,229 | INFO     | mean y: 2510793.5463980464
[2025-12-14 00:04:09] 2025-12-14 05:03:31,229 | INFO     | intersect: 136603011.87886208
[2025-12-14 00:04:09] 2025-12-14 05:03:31,231 | INFO     | chi2: 1.0822957201946015
[2025-12-14 00:04:09] 2025-12-14 05:03:31,232 | INFO     | current chi2=1.0822957201946015 (change=66.23060490587211 %)
[2025-12-14 00:04:09] 2025-12-14 05:03:31,242 | INFO     | sum of square deviations: 1350306489321.2625
[2025-12-14 00:04:09] 2025-12-14 05:03:31,471 | INFO     | sum of deviations: -219732724440.14697
[2025-12-14 00:04:09] 2025-12-14 05:03:31,471 | INFO     | mean x: 1765638730.783221
[2025-12-14 00:04:09] 2025-12-14 05:03:31,471 | INFO     | mean y: 2512218.0165339867
[2025-12-14 00:04:09] 2025-12-14 05:03:31,472 | INFO     | intersect: 289831142.8385975
[2025-12-14 00:04:09] 2025-12-14 05:03:31,479 | INFO     | chi2: 0.9046472891080752
[2025-12-14 00:04:09] 2025-12-14 05:03:31,479 | INFO     | current chi2=0.9046472891080752 (change=16.4140380278492 %)
[2025-12-14 00:04:09] 2025-12-14 05:03:31,480 | INFO     | left removable region: 20
[2025-12-14 00:04:09] 2025-12-14 05:03:31,493 | INFO     | sum of square deviations: 1311002306099.2454
[2025-12-14 00:04:09] 2025-12-14 05:03:31,734 | INFO     | sum of deviations: -208399658013.23694
[2025-12-14 00:04:09] 2025-12-14 05:03:31,734 | INFO     | mean x: 1765638852.7953
[2025-12-14 00:04:09] 2025-12-14 05:03:31,734 | INFO     | mean y: 2514657.4162028446
[2025-12-14 00:04:09] 2025-12-14 05:03:31,735 | INFO     | intersect: 283184288.1144492
[2025-12-14 00:04:09] 2025-12-14 05:03:31,749 | INFO     | chi2: 0.14776984314165204
[2025-12-14 00:04:09] 2025-12-14 05:03:31,749 | INFO     | current memory leak: -0.16 B/s (using 1617 data points, chi2=0.15)
[2025-12-14 00:04:09] 2025-12-14 05:03:31,751 | INFO     | could have reported an average CPU frequency of 2899 MHz (57 samples)
[2025-12-14 00:04:09] 2025-12-14 05:03:31,751 | INFO     | ..............................
[2025-12-14 00:04:09] 2025-12-14 05:03:31,751 | INFO     | . Timing measurements:
[2025-12-14 00:04:09] 2025-12-14 05:03:31,752 | INFO     | . get job = 0 s
[2025-12-14 00:04:09] 2025-12-14 05:03:31,752 | INFO     | . initial setup = 5 s
[2025-12-14 00:04:09] 2025-12-14 05:03:31,752 | INFO     | . payload setup = 21 s
[2025-12-14 00:04:09] 2025-12-14 05:03:31,752 | INFO     | . stage-in = 0 s
[2025-12-14 00:04:09] 2025-12-14 05:03:31,752 | INFO     | . payload execution = 100228 s
[2025-12-14 00:04:09] 2025-12-14 05:03:31,752 | INFO     | . stage-out = 7 s
[2025-12-14 00:04:09] 2025-12-14 05:03:31,752 | INFO     | . log creation = 1 s
[2025-12-14 00:04:09] 2025-12-14 05:03:31,753 | INFO     | ..............................
[2025-12-14 00:04:09] 2025-12-14 05:03:32,182 | INFO     | time since job start (100344s) is within the limit (174528.0s)
[2025-12-14 00:04:09] 2025-12-14 05:03:32,310 | INFO     | 
[2025-12-14 00:04:09] 2025-12-14 05:03:32,311 | INFO     | job summary report
[2025-12-14 00:04:09] 2025-12-14 05:03:32,311 | INFO     | --------------------------------------------------
[2025-12-14 00:04:09] 2025-12-14 05:03:32,311 | INFO     | PanDA job id: 6928559583
[2025-12-14 00:04:09] 2025-12-14 05:03:32,311 | INFO     | task id: 47886831
[2025-12-14 00:04:09] 2025-12-14 05:03:32,311 | INFO     | errors: (none)
[2025-12-14 00:04:09] 2025-12-14 05:03:32,312 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 00:04:09] 2025-12-14 05:03:32,312 | INFO     | pilot state: finished 
[2025-12-14 00:04:09] 2025-12-14 05:03:32,312 | INFO     | transexitcode: 0
[2025-12-14 00:04:09] 2025-12-14 05:03:32,312 | INFO     | exeerrorcode: 0
[2025-12-14 00:04:09] 2025-12-14 05:03:32,312 | INFO     | exeerrordiag: 
[2025-12-14 00:04:09] 2025-12-14 05:03:32,312 | INFO     | exitcode: 0
[2025-12-14 00:04:09] 2025-12-14 05:03:32,312 | INFO     | exitmsg: OK
[2025-12-14 00:04:09] 2025-12-14 05:03:32,313 | INFO     | cpuconsumptiontime: 86605 s
[2025-12-14 00:04:09] 2025-12-14 05:03:32,313 | INFO     | nevents: 400
[2025-12-14 00:04:09] 2025-12-14 05:03:32,313 | INFO     | neventsw: 0
[2025-12-14 00:04:09] 2025-12-14 05:03:32,313 | INFO     | pid: 3520102
[2025-12-14 00:04:09] 2025-12-14 05:03:32,313 | INFO     | pgrp: 3520102
[2025-12-14 00:04:09] 2025-12-14 05:03:32,313 | INFO     | corecount: 8
[2025-12-14 00:04:09] 2025-12-14 05:03:32,314 | INFO     | event service: False
[2025-12-14 00:04:09] 2025-12-14 05:03:32,314 | INFO     | sizes: {0: 2283806, 1: 2284005, 12: 2284005, 15: 2284295, 23: 2284323, 100254: 2348063, 100255: 2348190, 100264: 2357244, 100266: 2357300, 100308: 2357494}
[2025-12-14 00:04:09] 2025-12-14 05:03:32,314 | INFO     | --------------------------------------------------
[2025-12-14 00:04:09] 2025-12-14 05:03:32,314 | INFO     | 
[2025-12-14 00:04:09] 2025-12-14 05:03:32,314 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-14 00:04:09] 2025-12-14 05:03:32,421 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,422 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,422 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,422 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,422 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,423 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,423 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,423 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,423 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,423 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,423 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,423 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,424 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,424 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,424 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,424 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,424 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,424 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 00:04:09] 2025-12-14 05:03:32,424 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,425 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 00:04:09] 2025-12-14 05:03:32,425 | INFO     | job 6928559583 has completed (purged errors)
[2025-12-14 00:04:09] 2025-12-14 05:03:32,425 | INFO     | overall cleanup function is called
[2025-12-14 00:04:09] 2025-12-14 05:03:33,439 | INFO     | --- collectZombieJob: --- 10, [3520102]
[2025-12-14 00:04:09] 2025-12-14 05:03:33,440 | INFO     | zombie collector waiting for pid 3520102
[2025-12-14 00:04:09] 2025-12-14 05:03:33,440 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 00:04:09] 2025-12-14 05:03:33,440 | INFO     | collected zombie processes
[2025-12-14 00:04:09] 2025-12-14 05:03:33,440 | INFO     | will attempt to kill all subprocesses of pid=3520102
[2025-12-14 00:04:09] 2025-12-14 05:03:34,793 | INFO     | process IDs to be killed: [3520102] (in reverse order)
[2025-12-14 00:04:09] 2025-12-14 05:03:35,657 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 00:04:09] 2025-12-14 05:03:35,658 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 00:04:09] 2025-12-14 05:03:35,718 | INFO     | did not find any defunct processes belonging to 3520102
[2025-12-14 00:04:09] 2025-12-14 05:03:35,770 | INFO     | did not find any defunct processes belonging to 3520102
[2025-12-14 00:04:09] 2025-12-14 05:03:35,771 | INFO     | ready for new job
[2025-12-14 00:04:09] 2025-12-14 05:03:35,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 00:04:09] 2025-12-14 05:03:35,783 | INFO     | ***************************************
[2025-12-14 00:04:09] 2025-12-14 05:03:35,783 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 00:04:09] 2025-12-14 05:03:35,783 | INFO     | ***************************************
[2025-12-14 00:04:09] 2025-12-14 05:03:35,783 | INFO     | 
[2025-12-14 00:04:09] 2025-12-14 05:03:35,794 | INFO     | architecture information:
[2025-12-14 00:04:09] 2025-12-14 05:03:35,795 | INFO     | executing command: cat /etc/os-release
[2025-12-14 00:04:09] 2025-12-14 05:03:35,839 | INFO     | cat /etc/os-release:
[2025-12-14 00:04:09] NAME="CentOS Linux"
[2025-12-14 00:04:09] VERSION="7 (Core)"
[2025-12-14 00:04:09] ID="centos"
[2025-12-14 00:04:09] ID_LIKE="rhel fedora"
[2025-12-14 00:04:09] VERSION_ID="7"
[2025-12-14 00:04:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 00:04:09] ANSI_COLOR="0;31"
[2025-12-14 00:04:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 00:04:09] HOME_URL="https://www.centos.org/"
[2025-12-14 00:04:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 00:04:09] 
[2025-12-14 00:04:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 00:04:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 00:04:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 00:04:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 00:04:09] 
[2025-12-14 00:04:09] 2025-12-14 05:03:35,839 | INFO     | ***************************************
[2025-12-14 00:04:09] 2025-12-14 05:03:36,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-14 00:04:09] 2025-12-14 05:03:36,391 | INFO     | sufficient remaining disk space (52567212032 B)
[2025-12-14 00:04:09] 2025-12-14 05:03:36,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 00:04:09] 2025-12-14 05:03:36,392 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 00:04:09] 2025-12-14 05:03:36,392 | INFO     | update_server=False
[2025-12-14 00:04:09] 2025-12-14 05:03:36,392 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 00:04:09] 2025-12-14 05:03:36,569 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 00:04:09] 2025-12-14 05:03:36,766 | INFO     | all data control threads have been joined
[2025-12-14 00:04:09] 2025-12-14 05:03:37,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 00:04:09] 2025-12-14 05:03:37,180 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 00:04:09] 2025-12-14 05:03:37,180 | INFO     | aborting loop
[2025-12-14 00:04:09] 2025-12-14 05:03:37,340 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 00:04:09] 2025-12-14 05:03:37,414 | INFO     | [job] retrieve thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:37,461 | INFO     | [payload] failed_post thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:37,486 | INFO     | [data] copytool_in thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:37,507 | INFO     | [payload] validate_post thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:37,513 | INFO     | all job control threads have been joined
[2025-12-14 00:04:09] 2025-12-14 05:03:37,775 | INFO     | [data] control thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:37,820 | INFO     | all payload control threads have been joined
[2025-12-14 00:04:09] 2025-12-14 05:03:37,949 | INFO     | [job] validate thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,009 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,155 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,192 | INFO     | [job] job monitor thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,346 | INFO     | [job] queue monitor thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,520 | INFO     | [job] control thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,538 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,576 | INFO     | [data] copytool_out thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,827 | INFO     | [payload] control thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:38,832 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:03:41,142 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 00:04:09] 2025-12-14 05:04:00,660 | INFO     | [monitor] cgroup control has ended
[2025-12-14 00:04:09] 2025-12-14 05:04:02,194 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139724231690048)>', '<ExcThread(monitor, started 139722919761664)>']
[2025-12-14 00:04:09] 2025-12-14 05:04:06,590 | INFO     | PID=3510379 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 00:04:09] 2025-12-14 05:04:06,591 | INFO     | .. there are 33 such processes running
[2025-12-14 00:04:09] 2025-12-14 05:04:06,592 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 00:04:09] 2025-12-14 05:04:06,592 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 00:04:09] 2025-12-14 05:04:06,592 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 00:04:09] 2025-12-14 05:04:06,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 00:04:09] 2025-12-14 05:04:06,593 | INFO     | [monitor] control thread has ended
[2025-12-14 00:04:09] 2025-12-14 05:04:07,220 | INFO     | all workflow threads have been joined
[2025-12-14 00:04:09] 2025-12-14 05:04:07,220 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 00:04:09] 2025-12-14 05:04:07,220 | INFO     | traces error code: 0
[2025-12-14 00:04:09] 2025-12-14 05:04:07,221 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 00:04:09] 2025-12-14 05:04:07,975 [wrapper] ==== pilot stdout END ====
[2025-12-14 00:04:09] 2025-12-14 05:04:08,010 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 00:04:09] 2025-12-14 05:04:08,045 [wrapper] pilotpid: 3510379
[2025-12-14 00:04:09] 2025-12-14 05:04:08,065 [wrapper] Pilot exit status: 0
[2025-12-14 00:04:09] 2025-12-14 05:04:08,201 [wrapper] pandaids: 6928559583
[2025-12-14 00:04:09] 2025-12-14 05:04:08,502 [wrapper] cleanup supervisor_pilot  251072 3510380
[2025-12-14 00:04:09] 2025-12-14 05:04:08,520 [wrapper] Test setup, not cleaning
[2025-12-14 00:04:09] 2025-12-14 05:04:08,551 [wrapper] apfmon messages muted
[2025-12-14 00:04:09] 2025-12-14 05:04:08,573 [wrapper] ==== wrapper stdout END ====
[2025-12-14 00:04:09] 2025-12-14 05:04:08,659 [wrapper] ==== wrapper stderr END ====
[2025-12-14 00:04:09]  *** Error codes and diagnostics ***
[2025-12-14 00:04:09]     "exeErrorCode": 0,
[2025-12-14 00:04:09]     "exeErrorDiag": "",
[2025-12-14 00:04:09]     "pilotErrorCode": 0,
[2025-12-14 00:04:09]     "pilotErrorDiag": "",
[2025-12-14 00:04:09]  *** Listing of results directory ***
[2025-12-14 00:04:09] total 360320
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas    579449 Dec 12 16:46 pilot3.tar.gz
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas      5112 Dec 12 16:49 queuedata.json
[2025-12-14 00:04:09] -rwx------. 1 boincer umatlas     36322 Dec 12 16:49 runpilot2-wrapper.sh
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas       100 Dec 12 20:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 00:04:09] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 12 20:10 run_atlas
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas       105 Dec 12 20:10 job.xml
[2025-12-14 00:04:09] -rw-r--r--. 2 boincer umatlas 193763350 Dec 12 20:10 EVNT.47886829._000002.pool.root.1
[2025-12-14 00:04:09] -rw-r--r--. 2 boincer umatlas     15847 Dec 12 20:10 start_atlas.sh
[2025-12-14 00:04:09] drwxrwx--x. 2 boincer umatlas      4096 Dec 12 20:10 shared
[2025-12-14 00:04:09] -rw-r--r--. 2 boincer umatlas    592399 Dec 12 20:10 input.tar.gz
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas         0 Dec 12 20:10 boinc_lockfile
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas      2531 Dec 12 20:10 pandaJob.out
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas        57 Dec 12 20:10 setup.sh.local
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas    991720 Dec 12 20:11 agis_schedconf.cvmfs.json
[2025-12-14 00:04:09] drwx------. 5 boincer umatlas      4096 Dec 12 20:11 pilot3
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas      6523 Dec 13 23:54 init_data.xml
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas 150972001 Dec 14 00:01 HITS.47886831._000087.pool.root.1
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas       531 Dec 14 00:01 boinc_task_state.xml
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas      1051 Dec 14 00:02 memory_monitor_summary.json
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas   1516240 Dec 14 00:02 agis_ddmendpoints.agis.ALL.json
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas   1260414 Dec 14 00:02 log.47886831._000087.job.log.tgz.1
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas      7824 Dec 14 00:03 heartbeat.json
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas      8192 Dec 14 00:03 boinc_mmap_file
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas        28 Dec 14 00:03 wrapper_checkpoint.txt
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas        95 Dec 14 00:04 pilot_heartbeat.json
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas      4824 Dec 14 00:04 pilotlog.txt
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas   8893979 Dec 14 00:04 log.47886831._000087.job.log.1
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas       357 Dec 14 00:04 output.list
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas       620 Dec 14 00:04 runtime_log
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas  10178560 Dec 14 00:04 result.tar.gz
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas      9339 Dec 14 00:04 runtime_log.err
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas       659 Dec 14 00:04 ofPODmmBQo8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmuARKDmAw8VFo.diag
[2025-12-14 00:04:09] -rw-r--r--. 1 boincer umatlas     21461 Dec 14 00:04 stderr.txt
[2025-12-14 00:04:09] HITS file was successfully produced:
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas 150972001 Dec 14 00:01 shared/HITS.pool.root.1
[2025-12-14 00:04:09]  *** Contents of shared directory: ***
[2025-12-14 00:04:09] total 347200
[2025-12-14 00:04:09] -rw-r--r--. 2 boincer umatlas 193763350 Dec 12 20:10 ATLAS.root_0
[2025-12-14 00:04:09] -rw-r--r--. 2 boincer umatlas     15847 Dec 12 20:10 start_atlas.sh
[2025-12-14 00:04:09] -rw-r--r--. 2 boincer umatlas    592399 Dec 12 20:10 input.tar.gz
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas 150972001 Dec 14 00:01 HITS.pool.root.1
[2025-12-14 00:04:09] -rw-------. 1 boincer umatlas  10178560 Dec 14 00:04 result.tar.gz
00:04:11 (3503878): run_atlas exited; CPU time 91369.408232
00:04:11 (3503878): called boinc_finish(0)

</stderr_txt>
]]>

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