Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:11:54 (2823367): wrapper (7.7.26015): starting
06:11:54 (2823367): wrapper: running run_atlas (--nthreads 3)
[2025-12-12 06:11:54] Arguments: --nthreads 3
[2025-12-12 06:11:54] Threads: 3
[2025-12-12 06:11:54] Checking for CVMFS
[2025-12-12 06:11:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 06:11:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 06:11:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 06:11:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 06:11:54] 2.9.2.0 2804239 3 46264 153912 0 186 31164906 36864000 0 130560 0 47695 99.958 3963 7393 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-12 06:11:54] CVMFS is ok
[2025-12-12 06:11:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 06:11:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 06:11:54] Further information can be found at the LHC@home message board.
[2025-12-12 06:11:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 06:11:54] Checking for apptainer binary...
[2025-12-12 06:11:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 06:11:54] Running /usr/bin/apptainer --version
[2025-12-12 06:11:54] apptainer version 1.4.1-1.1
[2025-12-12 06:11:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 06:11:54] magicA250a
[2025-12-12 06:11:54] apptainer works
[2025-12-12 06:11:54] Set ATHENA_PROC_NUMBER=3
[2025-12-12 06:11:54] Set ATHENA_CORE_NUMBER=3
[2025-12-12 06:11:54] Starting ATLAS job with PandaID=6927067980
[2025-12-12 06:11:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 06:15:05]  *** The last 200 lines of the pilot log: ***
[2025-12-12 06:15:05] 2025-12-12 05:14:30,942 | INFO     | collected zombie processes
[2025-12-12 06:15:05] 2025-12-12 05:14:30,942 | INFO     | will attempt to kill all subprocesses of pid=2833535
[2025-12-12 06:15:05] 2025-12-12 05:14:30,985 | INFO     | process IDs to be killed: [2833535] (in reverse order)
[2025-12-12 06:15:05] 2025-12-12 05:14:31,008 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 06:15:05] 2025-12-12 05:14:31,008 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 06:15:05] 2025-12-12 05:14:31,009 | INFO     | did not find any defunct processes belonging to 2833535
[2025-12-12 06:15:05] 2025-12-12 05:14:31,011 | INFO     | did not find any defunct processes belonging to 2833535
[2025-12-12 06:15:05] 2025-12-12 05:14:31,011 | INFO     | ready for new job
[2025-12-12 06:15:05] 2025-12-12 05:14:31,011 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 06:15:05] 2025-12-12 05:14:31,011 | INFO     | ***************************************
[2025-12-12 06:15:05] 2025-12-12 05:14:31,011 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 06:15:05] 2025-12-12 05:14:31,011 | INFO     | ***************************************
[2025-12-12 06:15:05] 2025-12-12 05:14:31,011 | INFO     | 
[2025-12-12 06:15:05] 2025-12-12 05:14:31,012 | INFO     | architecture information:
[2025-12-12 06:15:05] 2025-12-12 05:14:31,012 | INFO     | executing command: cat /etc/os-release
[2025-12-12 06:15:05] 2025-12-12 05:14:31,021 | INFO     | cat /etc/os-release:
[2025-12-12 06:15:05] NAME="CentOS Linux"
[2025-12-12 06:15:05] VERSION="7 (Core)"
[2025-12-12 06:15:05] ID="centos"
[2025-12-12 06:15:05] ID_LIKE="rhel fedora"
[2025-12-12 06:15:05] VERSION_ID="7"
[2025-12-12 06:15:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 06:15:05] ANSI_COLOR="0;31"
[2025-12-12 06:15:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 06:15:05] HOME_URL="https://www.centos.org/"
[2025-12-12 06:15:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 06:15:05] 
[2025-12-12 06:15:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 06:15:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 06:15:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 06:15:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 06:15:05] 
[2025-12-12 06:15:05] 2025-12-12 05:14:31,021 | INFO     | ***************************************
[2025-12-12 06:15:05] 2025-12-12 05:14:31,524 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-12 06:15:05] 2025-12-12 05:14:31,537 | INFO     | sufficient remaining disk space (330894934016 B)
[2025-12-12 06:15:05] 2025-12-12 05:14:31,537 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 06:15:05] 2025-12-12 05:14:31,537 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 06:15:05] 2025-12-12 05:14:31,537 | INFO     | update_server=False
[2025-12-12 06:15:05] 2025-12-12 05:14:31,537 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 06:15:05] 2025-12-12 05:14:31,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 06:15:05] 2025-12-12 05:14:31,594 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-12 06:15:05] 2025-12-12 05:14:31,594 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-12 06:15:05] 2025-12-12 05:14:31,594 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 06:15:05] 2025-12-12 05:14:31,594 | INFO     | will abort loop
[2025-12-12 06:15:05] 2025-12-12 05:14:31,857 | INFO     | all job control threads have been joined
[2025-12-12 06:15:05] 2025-12-12 05:14:32,001 | INFO     | all payload control threads have been joined
[2025-12-12 06:15:05] 2025-12-12 05:14:32,035 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 06:15:05] 2025-12-12 05:14:32,303 | INFO     | all data control threads have been joined
[2025-12-12 06:15:05] 2025-12-12 05:14:32,372 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 06:15:05] 2025-12-12 05:14:32,543 | INFO     | [job] retrieve thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:32,543 | INFO     | [job] queue monitor thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:32,581 | INFO     | [data] copytool_in thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:32,600 | INFO     | [job] job monitor thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:32,863 | INFO     | [job] control thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:33,007 | INFO     | [payload] control thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:33,061 | INFO     | [payload] validate_post thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:33,121 | INFO     | [job] validate thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:33,192 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:33,244 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:33,308 | INFO     | [data] control thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:33,757 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:33,791 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:34,042 | INFO     | [data] copytool_out thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:34,132 | INFO     | [payload] failed_post thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:14:36,379 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 06:15:05] 2025-12-12 05:15:00,005 | INFO     | [monitor] cgroup control has ended
[2025-12-12 06:15:05] 2025-12-12 05:15:00,842 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395484518208)>', '<ExcThread(monitor, started 140395124074240)>']
[2025-12-12 06:15:05] 2025-12-12 05:15:02,540 | INFO     | PID=2827092 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-12 06:15:05] 2025-12-12 05:15:02,540 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 06:15:05] 2025-12-12 05:15:02,540 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 06:15:05] 2025-12-12 05:15:02,540 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 06:15:05] 2025-12-12 05:15:02,540 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 06:15:05] 2025-12-12 05:15:02,540 | INFO     | [monitor] control thread has ended
[2025-12-12 06:15:05] 2025-12-12 05:15:05,867 | INFO     | all workflow threads have been joined
[2025-12-12 06:15:05] 2025-12-12 05:15:05,867 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 06:15:05] 2025-12-12 05:15:05,868 | INFO     | traces error code: 0
[2025-12-12 06:15:05] 2025-12-12 05:15:05,868 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 06:15:05] 2025-12-12 05:15:05,916 [wrapper] ==== pilot stdout END ====
[2025-12-12 06:15:05] 2025-12-12 05:15:05,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 06:15:05] 2025-12-12 05:15:05,921 [wrapper] pilotpid: 2827092
[2025-12-12 06:15:05] 2025-12-12 05:15:05,924 [wrapper] Pilot exit status: 0
[2025-12-12 06:15:05] 2025-12-12 05:15:05,931 [wrapper] pandaids: 6927067980
[2025-12-12 06:15:05] 2025-12-12 05:15:05,947 [wrapper] cleanup supervisor_pilot 2827098 2827093
[2025-12-12 06:15:05] 2025-12-12 05:15:05,949 [wrapper] Test setup, not cleaning
[2025-12-12 06:15:05] 2025-12-12 05:15:05,951 [wrapper] apfmon messages muted
[2025-12-12 06:15:05] 2025-12-12 05:15:05,954 [wrapper] ==== wrapper stdout END ====
[2025-12-12 06:15:05] 2025-12-12 05:15:05,956 [wrapper] ==== wrapper stderr END ====
[2025-12-12 06:15:05]  *** Error codes and diagnostics ***
[2025-12-12 06:15:05]     "exeErrorCode": 15,
[2025-12-12 06:15:05]     "exeErrorDiag": "No events to process: 8000 (skipEvents) >= 2000 (inputEvents of EVNT",
[2025-12-12 06:15:05]     "pilotErrorCode": 1305,
[2025-12-12 06:15:05]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformExecutionException: No events to process: 8000 (skipEvents) >= 2000 (inputEvents of EVNT",
[2025-12-12 06:15:05]  *** Listing of results directory ***
[2025-12-12 06:15:05] total 59484
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc   579449 Dec 11 18:34 pilot3.tar.gz
[2025-12-12 06:15:05] -rwx------ 1 boinc boinc    36322 Dec 11 18:40 runpilot2-wrapper.sh
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc     5112 Dec 11 18:40 queuedata.json
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc      100 Dec 12 06:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 06:15:05] -rwxr-xr-x 1 boinc boinc     7986 Dec 12 06:11 run_atlas
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc      105 Dec 12 06:11 job.xml
[2025-12-12 06:15:05] -rw-r--r-- 2 boinc boinc 56816849 Dec 12 06:11 EVNT.47885634._000001.pool.root.1
[2025-12-12 06:15:05] -rw-r--r-- 2 boinc boinc   592393 Dec 12 06:11 input.tar.gz
[2025-12-12 06:15:05] -rw-r--r-- 2 boinc boinc    15847 Dec 12 06:11 start_atlas.sh
[2025-12-12 06:15:05] drwxrwx--x 2 boinc boinc     4096 Dec 12 06:11 shared
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc        0 Dec 12 06:11 boinc_setup_complete
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc     6442 Dec 12 06:11 init_data.xml
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc        0 Dec 12 06:11 boinc_lockfile
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc     2540 Dec 12 06:11 pandaJob.out
[2025-12-12 06:15:05] -rw------- 1 boinc boinc   990114 Dec 12 06:11 agis_schedconf.cvmfs.json
[2025-12-12 06:15:05] -rw------- 1 boinc boinc  1516240 Dec 12 06:11 agis_ddmendpoints.agis.ALL.json
[2025-12-12 06:15:05] drwx------ 5 boinc boinc     4096 Dec 12 06:12 pilot3
[2025-12-12 06:15:05] -rw------- 1 boinc boinc      963 Dec 12 06:12 memory_monitor_summary.json
[2025-12-12 06:15:05] -rw------- 1 boinc boinc    16684 Dec 12 06:12 log.47885636._000027.job.log.tgz.1
[2025-12-12 06:15:05] -rw------- 1 boinc boinc     6316 Dec 12 06:14 heartbeat.json
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc     8192 Dec 12 06:14 boinc_mmap_file
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc       22 Dec 12 06:14 wrapper_checkpoint.txt
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc      522 Dec 12 06:15 boinc_task_state.xml
[2025-12-12 06:15:05] -rw------- 1 boinc boinc       95 Dec 12 06:15 pilot_heartbeat.json
[2025-12-12 06:15:05] -rw------- 1 boinc boinc     4938 Dec 12 06:15 pilotlog.txt
[2025-12-12 06:15:05] -rw------- 1 boinc boinc    82001 Dec 12 06:15 log.47885636._000027.job.log.1
[2025-12-12 06:15:05] -rw------- 1 boinc boinc      188 Dec 12 06:15 output.list
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc      620 Dec 12 06:15 runtime_log
[2025-12-12 06:15:05] -rw------- 1 boinc boinc   112640 Dec 12 06:15 result.tar.gz
[2025-12-12 06:15:05] -rw------- 1 boinc boinc      651 Dec 12 06:15 x9yMDmWpzn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms5QKDmrXwzfm.diag
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc     8764 Dec 12 06:15 runtime_log.err
[2025-12-12 06:15:05] -rw-r--r-- 1 boinc boinc    10775 Dec 12 06:15 stderr.txt
[2025-12-12 06:15:06] No HITS result produced
[2025-12-12 06:15:06]  *** Contents of shared directory: ***
[2025-12-12 06:15:06] total 56200
[2025-12-12 06:15:06] -rw-r--r-- 2 boinc boinc 56816849 Dec 12 06:11 ATLAS.root_0
[2025-12-12 06:15:06] -rw-r--r-- 2 boinc boinc   592393 Dec 12 06:11 input.tar.gz
[2025-12-12 06:15:06] -rw-r--r-- 2 boinc boinc    15847 Dec 12 06:11 start_atlas.sh
[2025-12-12 06:15:06] -rw------- 1 boinc boinc   112640 Dec 12 06:15 result.tar.gz
06:15:07 (2823367): run_atlas exited; CPU time 9.950233
06:15:07 (2823367): called boinc_finish(0)

</stderr_txt>
]]>

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