Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
17:44:16 (3243286): wrapper (7.7.26015): starting
17:44:16 (3243286): wrapper: running run_atlas (--nthreads 10)
[2025-12-11 17:44:16] Arguments: --nthreads 10
[2025-12-11 17:44:16] Threads: 10
[2025-12-11 17:44:16] Checking for CVMFS
[2025-12-11 17:44:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-11 17:44:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-11 17:44:16] Running cvmfs_config stat atlas.cern.ch
[2025-12-11 17:44:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-11 17:44:17] 2.13.3.0 11319 7840 72536 153898 1 273 3437981 4096000 13702 130560 0 1185374260 99.999 1005319 553 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-11 17:44:17] CVMFS is ok
[2025-12-11 17:44:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-11 17:44:17] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-11 17:44:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-11 17:44:17] Further information can be found at the LHC@home message board.
[2025-12-11 17:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-11 17:44:17] Checking for apptainer binary...
[2025-12-11 17:44:17] apptainer is not installed, using version from CVMFS
[2025-12-11 17:44:17] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-11 17:44:17] 7950x-linux
[2025-12-11 17:44:17] apptainer works
[2025-12-11 17:44:17] Set ATHENA_PROC_NUMBER=10
[2025-12-11 17:44:17] Set ATHENA_CORE_NUMBER=10
[2025-12-11 17:44:17] Starting ATLAS job with PandaID=6925277840
[2025-12-11 17:44:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc545/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 05:30:49]  *** The last 200 lines of the pilot log: ***
[2025-12-12 05:30:49] 2025-12-12 13:29:39,245 | INFO     | time since job start (42307s) is within the limit (174528.0s)
[2025-12-12 05:30:49] 2025-12-12 13:29:40,973 | INFO     | monitor loop #3068: job 0:6925277840 is in state 'finished'
[2025-12-12 05:30:49] 2025-12-12 13:29:40,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,222 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-12 05:30:49] 2025-12-12 13:29:41,225 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.00078125
[2025-12-12 05:30:49] 2025-12-12 13:29:41,229 | INFO     | using path: /var/lib/multiboinc/boinc545/slots/1/PanDA_Pilot-6925277840/memory_monitor_summary.json (trf name=prmon)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,229 | INFO     | extracted standard info from prmon json
[2025-12-12 05:30:49] 2025-12-12 13:29:41,229 | INFO     | extracted standard memory fields from prmon json
[2025-12-12 05:30:49] 2025-12-12 13:29:41,229 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-12 05:30:49] 2025-12-12 13:29:41,235 | INFO     | fitting pss+swap vs Time
[2025-12-12 05:30:49] 2025-12-12 13:29:41,236 | INFO     | sum of square deviations: 103199412162.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,241 | INFO     | sum of deviations: 1134403082544.9993
[2025-12-12 05:30:49] 2025-12-12 13:29:41,241 | INFO     | mean x: 1765525013.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,242 | INFO     | mean y: 3671100.896103896
[2025-12-12 05:30:49] 2025-12-12 13:29:41,242 | INFO     | intersect: -19403581082.997395
[2025-12-12 05:30:49] 2025-12-12 13:29:41,242 | INFO     | chi2: 3.995022275309609
[2025-12-12 05:30:49] 2025-12-12 13:29:41,242 | INFO     | sum of square deviations: 100981733372.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,248 | INFO     | sum of deviations: 1319280892911.4998
[2025-12-12 05:30:49] 2025-12-12 13:29:41,248 | INFO     | mean x: 1765524860.5
[2025-12-12 05:30:49] 2025-12-12 13:29:41,248 | INFO     | mean y: 3683782.9636627906
[2025-12-12 05:30:49] 2025-12-12 13:29:41,248 | INFO     | intersect: -23062103826.736187
[2025-12-12 05:30:49] 2025-12-12 13:29:41,248 | INFO     | chi2: 2.3036917114995097
[2025-12-12 05:30:49] 2025-12-12 13:29:41,249 | INFO     | current chi2=2.3036917114995097 (change=42.335948268999914 %)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,249 | INFO     | sum of square deviations: 98796055182.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,257 | INFO     | sum of deviations: 1301834573363.0002
[2025-12-12 05:30:49] 2025-12-12 13:29:41,258 | INFO     | time since job start (42309s) is within the limit (174528.0s)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,258 | INFO     | mean x: 1765524708.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,258 | INFO     | mean y: 3682565.6793557834
[2025-12-12 05:30:49] 2025-12-12 13:29:41,258 | INFO     | intersect: -23260617823.30797
[2025-12-12 05:30:49] 2025-12-12 13:29:41,258 | INFO     | chi2: 2.3009869598904342
[2025-12-12 05:30:49] 2025-12-12 13:29:41,258 | INFO     | current chi2=2.3009869598904342 (change=0.1174094430940543 %)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,258 | INFO     | right removable region: 682
[2025-12-12 05:30:49] 2025-12-12 13:29:41,259 | INFO     | sum of square deviations: 100981733372.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,272 | INFO     | sum of deviations: 912514237312.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,272 | INFO     | mean x: 1765525165.5
[2025-12-12 05:30:49] 2025-12-12 13:29:41,272 | INFO     | mean y: 3686325.659883721
[2025-12-12 05:30:49] 2025-12-12 13:29:41,272 | INFO     | intersect: -15950356015.012476
[2025-12-12 05:30:49] 2025-12-12 13:29:41,273 | INFO     | chi2: 1.9373064019716153
[2025-12-12 05:30:49] 2025-12-12 13:29:41,273 | INFO     | current chi2=1.9373064019716153 (change=51.50699374206928 %)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,273 | INFO     | sum of square deviations: 98796055182.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,286 | INFO     | sum of deviations: 844368691395.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,286 | INFO     | mean x: 1765525318.0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,286 | INFO     | mean y: 3691078.2840409954
[2025-12-12 05:30:49] 2025-12-12 13:29:41,287 | INFO     | intersect: -15085517692.63465
[2025-12-12 05:30:49] 2025-12-12 13:29:41,287 | INFO     | chi2: 1.8532971311233135
[2025-12-12 05:30:49] 2025-12-12 13:29:41,287 | INFO     | current chi2=1.8532971311233135 (change=4.336395665796838 %)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,287 | INFO     | left removable region: 20
[2025-12-12 05:30:49] 2025-12-12 13:29:41,287 | INFO     | sum of square deviations: 89960404865.5
[2025-12-12 05:30:49] 2025-12-12 13:29:41,302 | INFO     | sum of deviations: 919656147140.9999
[2025-12-12 05:30:49] 2025-12-12 13:29:41,303 | INFO     | mean x: 1765525287.5
[2025-12-12 05:30:49] 2025-12-12 13:29:41,303 | INFO     | mean y: 3709485.8610271905
[2025-12-12 05:30:49] 2025-12-12 13:29:41,303 | INFO     | intersect: -18045077488.917686
[2025-12-12 05:30:49] 2025-12-12 13:29:41,303 | INFO     | chi2: 0.10494499855829655
[2025-12-12 05:30:49] 2025-12-12 13:29:41,303 | INFO     | current memory leak: 10.22 B/s (using 662 data points, chi2=0.10)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | could have reported an average CPU frequency of 3999 MHz (27 samples)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | ..............................
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | . Timing measurements:
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | . get job = 0 s
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | . initial setup = 3 s
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | . payload setup = 11 s
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | . stage-in = 0 s
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | . payload execution = 42267 s
[2025-12-12 05:30:49] 2025-12-12 13:29:41,307 | INFO     | . stage-out = 3 s
[2025-12-12 05:30:49] 2025-12-12 13:29:41,308 | INFO     | . log creation = 0 s
[2025-12-12 05:30:49] 2025-12-12 13:29:41,308 | INFO     | ..............................
[2025-12-12 05:30:49] 2025-12-12 13:29:41,367 | INFO     | 
[2025-12-12 05:30:49] 2025-12-12 13:29:41,367 | INFO     | job summary report
[2025-12-12 05:30:49] 2025-12-12 13:29:41,367 | INFO     | --------------------------------------------------
[2025-12-12 05:30:49] 2025-12-12 13:29:41,367 | INFO     | PanDA job id: 6925277840
[2025-12-12 05:30:49] 2025-12-12 13:29:41,367 | INFO     | task id: 47860557
[2025-12-12 05:30:49] 2025-12-12 13:29:41,367 | INFO     | errors: (none)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,367 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | pilot state: finished 
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | transexitcode: 0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | exeerrorcode: 0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | exeerrordiag: 
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | exitcode: 0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | exitmsg: OK
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | cpuconsumptiontime: 87784 s
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | nevents: 1000
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | neventsw: 0
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | pid: 3254502
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | pgrp: 3254502
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | corecount: 10
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | event service: False
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | sizes: {0: 2284279, 1: 2284534, 6: 2284796, 12: 2284824, 42281: 2347267, 42285: 2356289, 42286: 2356473, 42292: 2356719}
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | --------------------------------------------------
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | 
[2025-12-12 05:30:49] 2025-12-12 13:29:41,368 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc545/slots/1
[2025-12-12 05:30:49] 2025-12-12 13:29:41,394 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | job 6925277840 has completed (purged errors)
[2025-12-12 05:30:49] 2025-12-12 13:29:41,395 | INFO     | overall cleanup function is called
[2025-12-12 05:30:49] 2025-12-12 13:29:42,420 | INFO     | --- collectZombieJob: --- 10, [3254502]
[2025-12-12 05:30:49] 2025-12-12 13:29:42,420 | INFO     | zombie collector waiting for pid 3254502
[2025-12-12 05:30:49] 2025-12-12 13:29:42,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 05:30:49] 2025-12-12 13:29:42,420 | INFO     | collected zombie processes
[2025-12-12 05:30:49] 2025-12-12 13:29:42,420 | INFO     | will attempt to kill all subprocesses of pid=3254502
[2025-12-12 05:30:49] 2025-12-12 13:29:42,739 | INFO     | process IDs to be killed: [3254502] (in reverse order)
[2025-12-12 05:30:49] 2025-12-12 13:29:42,900 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 05:30:49] 2025-12-12 13:29:42,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 05:30:49] 2025-12-12 13:29:42,906 | INFO     | did not find any defunct processes belonging to 3254502
[2025-12-12 05:30:49] 2025-12-12 13:29:42,913 | INFO     | did not find any defunct processes belonging to 3254502
[2025-12-12 05:30:49] 2025-12-12 13:29:42,913 | INFO     | ready for new job
[2025-12-12 05:30:49] 2025-12-12 13:29:42,913 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 05:30:49] 2025-12-12 13:29:42,915 | INFO     | ***************************************
[2025-12-12 05:30:49] 2025-12-12 13:29:42,915 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 05:30:49] 2025-12-12 13:29:42,915 | INFO     | ***************************************
[2025-12-12 05:30:49] 2025-12-12 13:29:42,915 | INFO     | 
[2025-12-12 05:30:49] 2025-12-12 13:29:42,916 | INFO     | architecture information:
[2025-12-12 05:30:49] 2025-12-12 13:29:42,917 | INFO     | executing command: cat /etc/os-release
[2025-12-12 05:30:49] 2025-12-12 13:29:42,957 | INFO     | cat /etc/os-release:
[2025-12-12 05:30:49] NAME="CentOS Linux"
[2025-12-12 05:30:49] VERSION="7 (Core)"
[2025-12-12 05:30:49] ID="centos"
[2025-12-12 05:30:49] ID_LIKE="rhel fedora"
[2025-12-12 05:30:49] VERSION_ID="7"
[2025-12-12 05:30:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 05:30:49] ANSI_COLOR="0;31"
[2025-12-12 05:30:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 05:30:49] HOME_URL="https://www.centos.org/"
[2025-12-12 05:30:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 05:30:49] 
[2025-12-12 05:30:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 05:30:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 05:30:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 05:30:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 05:30:49] 
[2025-12-12 05:30:49] 2025-12-12 13:29:42,958 | INFO     | ***************************************
[2025-12-12 05:30:49] 2025-12-12 13:29:43,463 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc545/slots/1
[2025-12-12 05:30:49] 2025-12-12 13:29:43,490 | INFO     | sufficient remaining disk space (205619462144 B)
[2025-12-12 05:30:49] 2025-12-12 13:29:43,490 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 05:30:49] 2025-12-12 13:29:43,490 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 05:30:49] 2025-12-12 13:29:43,490 | INFO     | update_server=False
[2025-12-12 05:30:49] 2025-12-12 13:29:43,490 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 05:30:49] 2025-12-12 13:29:43,676 | INFO     | all payload control threads have been joined
[2025-12-12 05:30:49] 2025-12-12 13:29:43,704 | INFO     | all data control threads have been joined
[2025-12-12 05:30:49] 2025-12-12 13:29:44,338 | INFO     | all job control threads have been joined
[2025-12-12 05:30:49] 2025-12-12 13:29:44,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 05:30:49] 2025-12-12 13:29:44,481 | INFO     | aborting loop
[2025-12-12 05:30:49] 2025-12-12 13:29:44,495 | INFO     | [job] retrieve thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:44,681 | INFO     | [payload] control thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:44,709 | INFO     | [data] control thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:44,861 | INFO     | [payload] validate_post thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:44,929 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 05:30:49] 2025-12-12 13:29:45,021 | INFO     | [job] validate thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:45,077 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:45,108 | INFO     | [payload] failed_post thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:45,124 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:45,343 | INFO     | [job] control thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:45,462 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:45,486 | INFO     | [job] job monitor thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:45,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:45,652 | INFO     | [data] copytool_in thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:46,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 05:30:49] 2025-12-12 13:29:46,515 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 05:30:49] 2025-12-12 13:29:46,934 | INFO     | [data] copytool_out thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:47,382 | INFO     | [job] queue monitor thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:29:50,521 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 05:30:49] 2025-12-12 13:30:14,680 | INFO     | PID=3247127 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-12 05:30:49] 2025-12-12 13:30:14,680 | INFO     | .. there are 15 such processes running
[2025-12-12 05:30:49] 2025-12-12 13:30:14,680 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 05:30:49] 2025-12-12 13:30:14,680 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 05:30:49] 2025-12-12 13:30:14,680 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 05:30:49] 2025-12-12 13:30:43,037 | INFO     | [monitor] cgroup control has ended
[2025-12-12 05:30:49] 2025-12-12 13:30:44,600 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 137221892360000)>', '<ExcThread(monitor, started 137221545895680)>']
[2025-12-12 05:30:49] 2025-12-12 13:30:44,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 05:30:49] 2025-12-12 13:30:44,841 | INFO     | [monitor] control thread has ended
[2025-12-12 05:30:49] 2025-12-12 13:30:49,625 | INFO     | all workflow threads have been joined
[2025-12-12 05:30:49] 2025-12-12 13:30:49,625 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 05:30:49] 2025-12-12 13:30:49,625 | INFO     | traces error code: 0
[2025-12-12 05:30:49] 2025-12-12 13:30:49,625 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 05:30:49] 2025-12-12 13:30:49,709 [wrapper] ==== pilot stdout END ====
[2025-12-12 05:30:49] 2025-12-12 13:30:49,711 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 05:30:49] 2025-12-12 13:30:49,713 [wrapper] pilotpid: 3247127
[2025-12-12 05:30:49] 2025-12-12 13:30:49,714 [wrapper] Pilot exit status: 0
[2025-12-12 05:30:49] 2025-12-12 13:30:49,737 [wrapper] pandaids: 6925277840
[2025-12-12 05:30:49] 2025-12-12 13:30:49,788 [wrapper] cleanup supervisor_pilot  395498 3247128
[2025-12-12 05:30:49] 2025-12-12 13:30:49,790 [wrapper] Test setup, not cleaning
[2025-12-12 05:30:49] 2025-12-12 13:30:49,801 [wrapper] apfmon messages muted
[2025-12-12 05:30:49] 2025-12-12 13:30:49,812 [wrapper] ==== wrapper stdout END ====
[2025-12-12 05:30:49] 2025-12-12 13:30:49,818 [wrapper] ==== wrapper stderr END ====
[2025-12-12 05:30:49]  *** Error codes and diagnostics ***
[2025-12-12 05:30:49]     "exeErrorCode": 0,
[2025-12-12 05:30:49]     "exeErrorDiag": "",
[2025-12-12 05:30:49]     "pilotErrorCode": 0,
[2025-12-12 05:30:49]     "pilotErrorDiag": "",
[2025-12-12 05:30:49]  *** Listing of results directory ***
[2025-12-12 05:30:49] total 910548
[2025-12-12 05:30:49] -rw-r--r-- 1 root root    579449 Dec 10 00:00 pilot3.tar.gz
[2025-12-12 05:30:49] -rw-r--r-- 1 root root      5112 Dec 10 00:03 queuedata.json
[2025-12-12 05:30:49] -rwx------ 1 4871 1028     36292 Dec 10 00:03 runpilot2-wrapper.sh
[2025-12-12 05:30:49] -rw-r--r-- 1 root root       100 Dec 11 17:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 05:30:49] -rwxr-xr-x 1 root root      7986 Dec 11 17:44 run_atlas
[2025-12-12 05:30:49] -rw-r--r-- 1 root root       105 Dec 11 17:44 job.xml
[2025-12-12 05:30:49] -rw-r--r-- 2 root root 317189997 Dec 11 17:44 EVNT.47860555._000008.pool.root.1
[2025-12-12 05:30:49] -rw-r--r-- 2 root root     15847 Dec 11 17:44 start_atlas.sh
[2025-12-12 05:30:49] drwxrwx--x 2 root root      4096 Dec 11 17:44 shared
[2025-12-12 05:30:49] -rw-r--r-- 2 root root    592573 Dec 11 17:44 input.tar.gz
[2025-12-12 05:30:49] -rw-r--r-- 1 root root         0 Dec 11 17:44 boinc_lockfile
[2025-12-12 05:30:49] -rw-r--r-- 1 root root      2800 Dec 11 17:44 pandaJob.out
[2025-12-12 05:30:49] -rw------- 1 root root    990044 Dec 11 17:44 agis_schedconf.cvmfs.json
[2025-12-12 05:30:49] drwxr-xr-x 5  320  320      4096 Dec 11 17:44 pilot3
[2025-12-12 05:30:49] -rw-r--r-- 1 root root      7081 Dec 11 19:47 init_data.xml
[2025-12-12 05:30:49] -rw-r--r-- 1 root root       532 Dec 12 05:23 boinc_task_state.xml
[2025-12-12 05:30:49] -rw------- 1 root root 594812519 Dec 12 05:29 HITS.47860557._000080.pool.root.1
[2025-12-12 05:30:49] -rw------- 1 root root        95 Dec 12 05:29 pilot_heartbeat.json
[2025-12-12 05:30:49] -rw------- 1 root root      1046 Dec 12 05:29 memory_monitor_summary.json
[2025-12-12 05:30:49] -rw------- 1 root root   1516240 Dec 12 05:29 agis_ddmendpoints.agis.ALL.json
[2025-12-12 05:30:49] -rw------- 1 root root   2184965 Dec 12 05:29 log.47860557._000080.job.log.tgz.1
[2025-12-12 05:30:49] -rw------- 1 root root     26941 Dec 12 05:29 heartbeat.json
[2025-12-12 05:30:49] -rw-r--r-- 1 root root      8192 Dec 12 05:30 boinc_mmap_file
[2025-12-12 05:30:49] -rw-r--r-- 1 root root        28 Dec 12 05:30 wrapper_checkpoint.txt
[2025-12-12 05:30:49] -rw------- 1 root root      4839 Dec 12 05:30 pilotlog.txt
[2025-12-12 05:30:49] -rw------- 1 root root   6036995 Dec 12 05:30 log.47860557._000080.job.log.1
[2025-12-12 05:30:49] -rw------- 1 root root       353 Dec 12 05:30 output.list
[2025-12-12 05:30:49] -rw-r--r-- 1 root root       620 Dec 12 05:30 runtime_log
[2025-12-12 05:30:49] -rw------- 1 root root   8263680 Dec 12 05:30 result.tar.gz
[2025-12-12 05:30:49] -rw-r--r-- 1 root root      9021 Dec 12 05:30 runtime_log.err
[2025-12-12 05:30:49] -rw------- 1 root root       659 Dec 12 05:30 nq4KDmAMUn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm43MKDmWt76kn.diag
[2025-12-12 05:30:49] -rw-r--r-- 1 root root     21319 Dec 12 05:30 stderr.txt
[2025-12-12 05:30:49] HITS file was successfully produced:
[2025-12-12 05:30:50] -rw------- 1 root root 594812519 Dec 12 05:29 shared/HITS.pool.root.1
[2025-12-12 05:30:50]  *** Contents of shared directory: ***
[2025-12-12 05:30:50] total 899304
[2025-12-12 05:30:50] -rw-r--r-- 2 root root 317189997 Dec 11 17:44 ATLAS.root_0
[2025-12-12 05:30:50] -rw-r--r-- 2 root root     15847 Dec 11 17:44 start_atlas.sh
[2025-12-12 05:30:50] -rw-r--r-- 2 root root    592573 Dec 11 17:44 input.tar.gz
[2025-12-12 05:30:50] -rw------- 1 root root 594812519 Dec 12 05:29 HITS.pool.root.1
[2025-12-12 05:30:50] -rw------- 1 root root   8263680 Dec 12 05:30 result.tar.gz
05:30:51 (3243286): run_atlas exited; CPU time 87931.280643
05:30:51 (3243286): called boinc_finish(0)

</stderr_txt>
]]>

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