Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:45:23 (2220): wrapper (7.7.26015): starting
11:45:23 (2220): wrapper: running run_atlas (--nthreads 8)
[2025-12-11 11:45:23] Arguments: --nthreads 8
[2025-12-11 11:45:23] Threads: 8
[2025-12-11 11:45:23] Checking for CVMFS
[2025-12-11 11:45:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-11 11:45:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-11 11:45:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-11 11:45:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-11 11:45:24] 2.11.2.0 2787 183408 82896 153893 2 56 12659740 20275201 1 130560 2 71107796 99.945 8162185 24820 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-11 11:45:24] CVMFS is ok
[2025-12-11 11:45:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-11 11:45:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-11 11:45:24] Further information can be found at the LHC@home message board.
[2025-12-11 11:45:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-11 11:45:24] Checking for apptainer binary...
[2025-12-11 11:45:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-11 11:45:24] Running /usr/bin/apptainer --version
[2025-12-11 11:45:24] apptainer version 1.3.2-1.el7
[2025-12-11 11:45:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-11 11:45:26] c-115-2.aglt2.org
[2025-12-11 11:45:26] apptainer works
[2025-12-11 11:45:26] Set ATHENA_PROC_NUMBER=8
[2025-12-11 11:45:26] Set ATHENA_CORE_NUMBER=8
[2025-12-11 11:45:26] Starting ATLAS job with PandaID=6926945766
[2025-12-11 11:45:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-11 19:22:34]  *** The last 200 lines of the pilot log: ***
[2025-12-11 19:22:34] 2025-12-12 00:21:32,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 19:22:34] 2025-12-12 00:21:34,539 | INFO     | time since job start (27352s) is within the limit (174528.0s)
[2025-12-11 19:22:34] 2025-12-12 00:21:35,075 | INFO     | monitor loop #2013: job 0:6926945766 is in state 'finished'
[2025-12-11 19:22:34] 2025-12-12 00:21:35,075 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 19:22:34] 2025-12-12 00:21:36,544 | INFO     | time since job start (27354s) is within the limit (174528.0s)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,181 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-11 19:22:34] 2025-12-12 00:21:37,184 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1812.25
[2025-12-11 19:22:34] 2025-12-12 00:21:37,186 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6926945766/memory_monitor_summary.json (trf name=prmon)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,187 | INFO     | extracted standard info from prmon json
[2025-12-11 19:22:34] 2025-12-12 00:21:37,187 | INFO     | extracted standard memory fields from prmon json
[2025-12-11 19:22:34] 2025-12-12 00:21:37,187 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-11 19:22:34] 2025-12-12 00:21:37,196 | INFO     | fitting pss+swap vs Time
[2025-12-11 19:22:34] 2025-12-12 00:21:37,197 | INFO     | sum of square deviations: 27881328609.819187
[2025-12-11 19:22:34] 2025-12-12 00:21:37,201 | INFO     | sum of deviations: 349584290056.4505
[2025-12-11 19:22:34] 2025-12-12 00:21:37,201 | INFO     | mean x: 1765485213.9486606
[2025-12-11 19:22:34] 2025-12-12 00:21:37,201 | INFO     | mean y: 3403618.5848214286
[2025-12-11 19:22:34] 2025-12-12 00:21:37,201 | INFO     | intersect: -22132768719.559925
[2025-12-11 19:22:34] 2025-12-12 00:21:37,202 | INFO     | chi2: 4.881418982622397
[2025-12-11 19:22:34] 2025-12-12 00:21:37,202 | INFO     | sum of square deviations: 26958247023.801384
[2025-12-11 19:22:34] 2025-12-12 00:21:37,206 | INFO     | sum of deviations: 498012918758.43085
[2025-12-11 19:22:34] 2025-12-12 00:21:37,206 | INFO     | mean x: 1765485061.4537246
[2025-12-11 19:22:34] 2025-12-12 00:21:37,207 | INFO     | mean y: 3428107.4356659143
[2025-12-11 19:22:34] 2025-12-12 00:21:37,207 | INFO     | intersect: -32611243302.864223
[2025-12-11 19:22:34] 2025-12-12 00:21:37,207 | INFO     | chi2: 2.5783258423175295
[2025-12-11 19:22:34] 2025-12-12 00:21:37,207 | INFO     | current chi2=2.5783258423175295 (change=47.18081255683566 %)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,208 | INFO     | sum of square deviations: 26055743574.17584
[2025-12-11 19:22:34] 2025-12-12 00:21:37,212 | INFO     | sum of deviations: 515082056789.6466
[2025-12-11 19:22:34] 2025-12-12 00:21:37,212 | INFO     | mean x: 1765484908.956621
[2025-12-11 19:22:34] 2025-12-12 00:21:37,212 | INFO     | mean y: 3430961.1392694064
[2025-12-11 19:22:34] 2025-12-12 00:21:37,212 | INFO     | intersect: -34897495797.97059
[2025-12-11 19:22:34] 2025-12-12 00:21:37,213 | INFO     | chi2: 2.4204989207700796
[2025-12-11 19:22:34] 2025-12-12 00:21:37,213 | INFO     | current chi2=2.4204989207700796 (change=6.121294638445974 %)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,213 | INFO     | right removable region: 437
[2025-12-11 19:22:34] 2025-12-12 00:21:37,213 | INFO     | sum of square deviations: 26958124413.801376
[2025-12-11 19:22:34] 2025-12-12 00:21:37,217 | INFO     | sum of deviations: 202772417607.08136
[2025-12-11 19:22:34] 2025-12-12 00:21:37,218 | INFO     | mean x: 1765485366.4537246
[2025-12-11 19:22:34] 2025-12-12 00:21:37,218 | INFO     | mean y: 3427803.223476298
[2025-12-11 19:22:34] 2025-12-12 00:21:37,218 | INFO     | intersect: -13276121267.425877
[2025-12-11 19:22:34] 2025-12-12 00:21:37,218 | INFO     | chi2: 2.540768763114226
[2025-12-11 19:22:34] 2025-12-12 00:21:37,218 | INFO     | current chi2=2.540768763114226 (change=47.950201116535304 %)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,219 | INFO     | sum of square deviations: 26055552034.17583
[2025-12-11 19:22:34] 2025-12-12 00:21:37,223 | INFO     | sum of deviations: 181277594417.2373
[2025-12-11 19:22:34] 2025-12-12 00:21:37,223 | INFO     | mean x: 1765485518.956621
[2025-12-11 19:22:34] 2025-12-12 00:21:37,223 | INFO     | mean y: 3431428.5388127854
[2025-12-11 19:22:34] 2025-12-12 00:21:37,223 | INFO     | intersect: -12279669211.015432
[2025-12-11 19:22:34] 2025-12-12 00:21:37,224 | INFO     | chi2: 2.5220231742640804
[2025-12-11 19:22:34] 2025-12-12 00:21:37,224 | INFO     | current chi2=2.5220231742640804 (change=0.7377920069817386 %)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,224 | INFO     | left removable region: 20
[2025-12-11 19:22:34] 2025-12-12 00:21:37,225 | INFO     | sum of square deviations: 22484663543.985634
[2025-12-11 19:22:34] 2025-12-12 00:21:37,228 | INFO     | sum of deviations: 322055153773.3451
[2025-12-11 19:22:34] 2025-12-12 00:21:37,229 | INFO     | mean x: 1765485488.4748201
[2025-12-11 19:22:34] 2025-12-12 00:21:37,229 | INFO     | mean y: 3463954.6043165466
[2025-12-11 19:22:34] 2025-12-12 00:21:37,229 | INFO     | intersect: -25284159289.70509
[2025-12-11 19:22:34] 2025-12-12 00:21:37,229 | INFO     | chi2: 0.02977225789293867
[2025-12-11 19:22:34] 2025-12-12 00:21:37,229 | INFO     | current memory leak: 14.32 B/s (using 417 data points, chi2=0.03)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,230 | INFO     | could have reported an average CPU frequency of 2345 MHz (18 samples)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,230 | INFO     | ..............................
[2025-12-11 19:22:34] 2025-12-12 00:21:37,230 | INFO     | . Timing measurements:
[2025-12-11 19:22:34] 2025-12-12 00:21:37,230 | INFO     | . get job = 0 s
[2025-12-11 19:22:34] 2025-12-12 00:21:37,230 | INFO     | . initial setup = 2 s
[2025-12-11 19:22:34] 2025-12-12 00:21:37,230 | INFO     | . payload setup = 15 s
[2025-12-11 19:22:34] 2025-12-12 00:21:37,231 | INFO     | . stage-in = 0 s
[2025-12-11 19:22:34] 2025-12-12 00:21:37,231 | INFO     | . payload execution = 27305 s
[2025-12-11 19:22:34] 2025-12-12 00:21:37,231 | INFO     | . stage-out = 2 s
[2025-12-11 19:22:34] 2025-12-12 00:21:37,231 | INFO     | . log creation = 0 s
[2025-12-11 19:22:34] 2025-12-12 00:21:37,231 | INFO     | ..............................
[2025-12-11 19:22:34] 2025-12-12 00:21:37,313 | INFO     | 
[2025-12-11 19:22:34] 2025-12-12 00:21:37,314 | INFO     | job summary report
[2025-12-11 19:22:34] 2025-12-12 00:21:37,314 | INFO     | --------------------------------------------------
[2025-12-11 19:22:34] 2025-12-12 00:21:37,314 | INFO     | PanDA job id: 6926945766
[2025-12-11 19:22:34] 2025-12-12 00:21:37,314 | INFO     | task id: 47866640
[2025-12-11 19:22:34] 2025-12-12 00:21:37,314 | INFO     | errors: (none)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,314 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-11 19:22:34] 2025-12-12 00:21:37,314 | INFO     | pilot state: finished 
[2025-12-11 19:22:34] 2025-12-12 00:21:37,315 | INFO     | transexitcode: 0
[2025-12-11 19:22:34] 2025-12-12 00:21:37,315 | INFO     | exeerrorcode: 0
[2025-12-11 19:22:34] 2025-12-12 00:21:37,315 | INFO     | exeerrordiag: 
[2025-12-11 19:22:34] 2025-12-12 00:21:37,315 | INFO     | exitcode: 0
[2025-12-11 19:22:34] 2025-12-12 00:21:37,315 | INFO     | exitmsg: OK
[2025-12-11 19:22:34] 2025-12-12 00:21:37,315 | INFO     | cpuconsumptiontime: 211130 s
[2025-12-11 19:22:34] 2025-12-12 00:21:37,315 | INFO     | nevents: 1000
[2025-12-11 19:22:34] 2025-12-12 00:21:37,315 | INFO     | neventsw: 0
[2025-12-11 19:22:34] 2025-12-12 00:21:37,316 | INFO     | pid: 13090
[2025-12-11 19:22:34] 2025-12-12 00:21:37,316 | INFO     | pgrp: 13090
[2025-12-11 19:22:34] 2025-12-12 00:21:37,316 | INFO     | corecount: 8
[2025-12-11 19:22:34] 2025-12-12 00:21:37,316 | INFO     | event service: False
[2025-12-11 19:22:34] 2025-12-12 00:21:37,316 | INFO     | sizes: {0: 2284515, 1: 2284657, 6: 2284919, 11: 2284947, 27324: 2341713, 27327: 2350707, 27329: 2350891, 27337: 2351137}
[2025-12-11 19:22:34] 2025-12-12 00:21:37,316 | INFO     | --------------------------------------------------
[2025-12-11 19:22:34] 2025-12-12 00:21:37,317 | INFO     | 
[2025-12-11 19:22:34] 2025-12-12 00:21:37,317 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-11 19:22:34] 2025-12-12 00:21:37,345 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,346 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,346 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,347 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,347 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,347 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,347 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,348 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,348 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,348 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,348 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,349 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,349 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,349 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,349 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,350 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,350 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-11 19:22:34] 2025-12-12 00:21:37,351 | INFO     | job 6926945766 has completed (purged errors)
[2025-12-11 19:22:34] 2025-12-12 00:21:37,351 | INFO     | overall cleanup function is called
[2025-12-11 19:22:34] 2025-12-12 00:21:38,367 | INFO     | --- collectZombieJob: --- 10, [13090]
[2025-12-11 19:22:34] 2025-12-12 00:21:38,367 | INFO     | zombie collector waiting for pid 13090
[2025-12-11 19:22:34] 2025-12-12 00:21:38,368 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-11 19:22:34] 2025-12-12 00:21:38,368 | INFO     | collected zombie processes
[2025-12-11 19:22:34] 2025-12-12 00:21:38,368 | INFO     | will attempt to kill all subprocesses of pid=13090
[2025-12-11 19:22:34] 2025-12-12 00:21:38,467 | INFO     | process IDs to be killed: [13090] (in reverse order)
[2025-12-11 19:22:34] 2025-12-12 00:21:38,523 | WARNING  | found no corresponding commands to process id(s)
[2025-12-11 19:22:34] 2025-12-12 00:21:38,523 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-11 19:22:34] 2025-12-12 00:21:38,527 | INFO     | did not find any defunct processes belonging to 13090
[2025-12-11 19:22:34] 2025-12-12 00:21:38,530 | INFO     | did not find any defunct processes belonging to 13090
[2025-12-11 19:22:34] 2025-12-12 00:21:38,530 | INFO     | ready for new job
[2025-12-11 19:22:34] 2025-12-12 00:21:38,531 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-11 19:22:34] 2025-12-12 00:21:38,533 | INFO     | ***************************************
[2025-12-11 19:22:34] 2025-12-12 00:21:38,533 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-11 19:22:34] 2025-12-12 00:21:38,534 | INFO     | ***************************************
[2025-12-11 19:22:34] 2025-12-12 00:21:38,534 | INFO     | 
[2025-12-11 19:22:34] 2025-12-12 00:21:38,534 | INFO     | architecture information:
[2025-12-11 19:22:34] 2025-12-12 00:21:38,535 | INFO     | executing command: cat /etc/os-release
[2025-12-11 19:22:34] 2025-12-12 00:21:38,553 | INFO     | cat /etc/os-release:
[2025-12-11 19:22:34] NAME="CentOS Linux"
[2025-12-11 19:22:34] VERSION="7 (Core)"
[2025-12-11 19:22:34] ID="centos"
[2025-12-11 19:22:34] ID_LIKE="rhel fedora"
[2025-12-11 19:22:34] VERSION_ID="7"
[2025-12-11 19:22:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-11 19:22:34] ANSI_COLOR="0;31"
[2025-12-11 19:22:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-11 19:22:34] HOME_URL="https://www.centos.org/"
[2025-12-11 19:22:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-11 19:22:34] 
[2025-12-11 19:22:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-11 19:22:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-11 19:22:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-11 19:22:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-11 19:22:34] 
[2025-12-11 19:22:34] 2025-12-12 00:21:38,554 | INFO     | ***************************************
[2025-12-11 19:22:34] 2025-12-12 00:21:39,057 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-11 19:22:34] 2025-12-12 00:21:39,077 | INFO     | sufficient remaining disk space (17930649600 B)
[2025-12-11 19:22:34] 2025-12-12 00:21:39,077 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-11 19:22:34] 2025-12-12 00:21:39,078 | INFO     | current server update state: UPDATING_FINAL
[2025-12-11 19:22:34] 2025-12-12 00:21:39,078 | INFO     | update_server=False
[2025-12-11 19:22:34] 2025-12-12 00:21:39,078 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-11 19:22:34] 2025-12-12 00:21:39,079 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-11 19:22:34] 2025-12-12 00:21:39,079 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-11 19:22:34] 2025-12-12 00:21:39,079 | INFO     | aborting loop
[2025-12-11 19:22:34] 2025-12-12 00:21:39,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-11 19:22:34] 2025-12-12 00:21:39,677 | INFO     | all data control threads have been joined
[2025-12-11 19:22:34] 2025-12-12 00:21:39,981 | INFO     | all payload control threads have been joined
[2025-12-11 19:22:34] 2025-12-12 00:21:40,083 | INFO     | [job] job monitor thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,084 | INFO     | [job] queue monitor thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,084 | INFO     | [job] retrieve thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,092 | INFO     | [payload] execute_payloads thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,208 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-11 19:22:34] 2025-12-12 00:21:40,560 | INFO     | [job] validate thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,683 | INFO     | [data] control thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,713 | INFO     | all job control threads have been joined
[2025-12-11 19:22:34] 2025-12-12 00:21:40,735 | INFO     | [payload] failed_post thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,904 | INFO     | [data] copytool_in thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,923 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,932 | INFO     | [job] create_data_payload thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:40,987 | INFO     | [payload] control thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:41,179 | INFO     | [payload] validate_post thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:41,521 | INFO     | [payload] validate_pre thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:41,719 | INFO     | [job] control thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:42,214 | INFO     | [data] copytool_out thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:21:43,099 | INFO     | [data] queue_monitor thread has finished
[2025-12-11 19:22:34] 2025-12-12 00:22:09,741 | INFO     | PID=5947 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-11 19:22:34] 2025-12-12 00:22:09,742 | INFO     | found 0 job(s) in 20 queues
[2025-12-11 19:22:34] 2025-12-12 00:22:09,742 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-11 19:22:34] 2025-12-12 00:22:09,742 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-11 19:22:34] 2025-12-12 00:22:27,280 | INFO     | [monitor] cgroup control has ended
[2025-12-11 19:22:34] 2025-12-12 00:22:29,070 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140300860118848)>', '<ExcThread(monitor, started 140299661731584)>']
[2025-12-11 19:22:34] 2025-12-12 00:22:29,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-11 19:22:34] 2025-12-12 00:22:29,843 | INFO     | [monitor] control thread has ended
[2025-12-11 19:22:34] 2025-12-12 00:22:34,096 | INFO     | all workflow threads have been joined
[2025-12-11 19:22:34] 2025-12-12 00:22:34,096 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-11 19:22:34] 2025-12-12 00:22:34,097 | INFO     | traces error code: 0
[2025-12-11 19:22:34] 2025-12-12 00:22:34,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-11 19:22:34] 2025-12-12 00:22:34,218 [wrapper] ==== pilot stdout END ====
[2025-12-11 19:22:34] 2025-12-12 00:22:34,223 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-11 19:22:34] 2025-12-12 00:22:34,228 [wrapper] pilotpid: 5947
[2025-12-11 19:22:34] 2025-12-12 00:22:34,233 [wrapper] Pilot exit status: 0
[2025-12-11 19:22:34] 2025-12-12 00:22:34,249 [wrapper] pandaids: 6926945766
[2025-12-11 19:22:34] 2025-12-12 00:22:34,305 [wrapper] cleanup supervisor_pilot 13231 5948
[2025-12-11 19:22:34] 2025-12-12 00:22:34,310 [wrapper] Test setup, not cleaning
[2025-12-11 19:22:34] 2025-12-12 00:22:34,315 [wrapper] apfmon messages muted
[2025-12-11 19:22:34] 2025-12-12 00:22:34,320 [wrapper] ==== wrapper stdout END ====
[2025-12-11 19:22:34] 2025-12-12 00:22:34,325 [wrapper] ==== wrapper stderr END ====
[2025-12-11 19:22:34]  *** Error codes and diagnostics ***
[2025-12-11 19:22:34]     "exeErrorCode": 0,
[2025-12-11 19:22:34]     "exeErrorDiag": "",
[2025-12-11 19:22:34]     "pilotErrorCode": 0,
[2025-12-11 19:22:34]     "pilotErrorDiag": "",
[2025-12-11 19:22:34]  *** Listing of results directory ***
[2025-12-11 19:22:34] total 939296
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas    579449 Dec 11 10:27 pilot3.tar.gz
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas      5112 Dec 11 10:45 queuedata.json
[2025-12-11 19:22:34] -rwx------ 1 boincer umatlas     36322 Dec 11 10:47 runpilot2-wrapper.sh
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas       100 Dec 11 11:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-11 19:22:34] -rwxr-xr-x 1 boincer umatlas      7986 Dec 11 11:45 run_atlas
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas       105 Dec 11 11:45 job.xml
[2025-12-11 19:22:34] -rw-r--r-- 2 boincer umatlas 329121266 Dec 11 11:45 EVNT.47866638._000025.pool.root.1
[2025-12-11 19:22:34] -rw-r--r-- 2 boincer umatlas     15847 Dec 11 11:45 start_atlas.sh
[2025-12-11 19:22:34] drwxrwx--x 2 boincer umatlas      4096 Dec 11 11:45 shared
[2025-12-11 19:22:34] -rw-r--r-- 2 boincer umatlas    592610 Dec 11 11:45 input.tar.gz
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas         0 Dec 11 11:45 boinc_lockfile
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas      2897 Dec 11 11:45 pandaJob.out
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas        57 Dec 11 11:45 setup.sh.local
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas    990021 Dec 11 11:45 agis_schedconf.cvmfs.json
[2025-12-11 19:22:34] drwx------ 5 boincer umatlas      4096 Dec 11 11:45 pilot3
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas       533 Dec 11 19:13 boinc_task_state.xml
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas 617557412 Dec 11 19:21 HITS.47866640._000245.pool.root.1
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas      1065 Dec 11 19:21 memory_monitor_summary.json
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas   1516240 Dec 11 19:21 agis_ddmendpoints.agis.ALL.json
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas   1821147 Dec 11 19:21 log.47866640._000245.job.log.tgz.1
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas     27905 Dec 11 19:21 heartbeat.json
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas        95 Dec 11 19:22 pilot_heartbeat.json
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas      5910 Dec 11 19:22 init_data.xml
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas      8192 Dec 11 19:22 boinc_mmap_file
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas        29 Dec 11 19:22 wrapper_checkpoint.txt
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas      4745 Dec 11 19:22 pilotlog.txt
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas   3783681 Dec 11 19:22 log.47866640._000245.job.log.1
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas       353 Dec 11 19:22 output.list
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas       620 Dec 11 19:22 runtime_log
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas   5642240 Dec 11 19:22 result.tar.gz
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas      9338 Dec 11 19:22 runtime_log.err
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas       667 Dec 11 19:22 1mLKDmP4xn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmt4QKDmsxKDhm.diag
[2025-12-11 19:22:34] -rw-r--r-- 1 boincer umatlas     21234 Dec 11 19:22 stderr.txt
[2025-12-11 19:22:34] HITS file was successfully produced:
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas 617557412 Dec 11 19:21 shared/HITS.pool.root.1
[2025-12-11 19:22:34]  *** Contents of shared directory: ***
[2025-12-11 19:22:34] total 930604
[2025-12-11 19:22:34] -rw-r--r-- 2 boincer umatlas 329121266 Dec 11 11:45 ATLAS.root_0
[2025-12-11 19:22:34] -rw-r--r-- 2 boincer umatlas     15847 Dec 11 11:45 start_atlas.sh
[2025-12-11 19:22:34] -rw-r--r-- 2 boincer umatlas    592610 Dec 11 11:45 input.tar.gz
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas 617557412 Dec 11 19:21 HITS.pool.root.1
[2025-12-11 19:22:34] -rw------- 1 boincer umatlas   5642240 Dec 11 19:22 result.tar.gz
19:22:36 (2220): run_atlas exited; CPU time 208451.908283
19:22:36 (2220): called boinc_finish(0)

</stderr_txt>
]]>

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