Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:30:59 (1736775): wrapper (7.7.26015): starting
11:30:59 (1736775): wrapper: running run_atlas (--nthreads 11)
[2025-12-11 11:30:59] Arguments: --nthreads 11
[2025-12-11 11:30:59] Threads: 11
[2025-12-11 11:30:59] Checking for CVMFS
[2025-12-11 11:30:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-11 11:30:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-11 11:30:59] Running cvmfs_config stat atlas.cern.ch
[2025-12-11 11:31:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-11 11:31:01] 2.13.3.0 7100 51829 136348 153893 3 276 29694486 40960001 58704 16776704 0 696050946 99.692 514873213 47475 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-11 11:31:01] CVMFS is ok
[2025-12-11 11:31:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-11 11:31:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-11 11:31:01] Further information can be found at the LHC@home message board.
[2025-12-11 11:31:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-11 11:31:01] Checking for apptainer binary...
[2025-12-11 11:31:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-11 11:31:01] Running /usr/bin/apptainer --version
[2025-12-11 11:31:01] apptainer version 1.4.4-1.el9
[2025-12-11 11:31:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-11 11:31:02] c8-6-10.aglt2.org
[2025-12-11 11:31:02] apptainer works
[2025-12-11 11:31:02] Set ATHENA_PROC_NUMBER=11
[2025-12-11 11:31:02] Set ATHENA_CORE_NUMBER=11
[2025-12-11 11:31:02] Starting ATLAS job with PandaID=6926944333
[2025-12-11 11:31:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-11 13:04:31]  *** The last 200 lines of the pilot log: ***
[2025-12-11 13:04:31] 2025-12-11 18:03:23,530 | INFO     | job 6926944333 has state=finished
[2025-12-11 13:04:31] 2025-12-11 18:03:23,530 | INFO     | preparing for final server update for job 6926944333 in state='finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:23,531 | INFO     | this job has now completed (state=finished)
[2025-12-11 13:04:31] 2025-12-11 18:03:23,531 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-12-11 13:04:31] 2025-12-11 18:03:23,531 | INFO     | log transfer has been attempted: DONE
[2025-12-11 13:04:31] 2025-12-11 18:03:23,531 | INFO     | job 6926944333 has finished - writing final server update
[2025-12-11 13:04:31] 2025-12-11 18:03:23,531 | INFO     | total number of processed events: 400 (read)
[2025-12-11 13:04:31] 2025-12-11 18:03:23,532 | INFO     | executing command: lscpu
[2025-12-11 13:04:31] 2025-12-11 18:03:23,636 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-11 13:04:31] 2025-12-11 18:03:24,236 | INFO     | time since job start (5468s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:24,946 | INFO     | monitor loop #357: job 0:6926944333 is in state 'finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:24,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 13:04:31] 2025-12-11 18:03:26,242 | INFO     | time since job start (5470s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:27,451 | INFO     | monitor loop #358: job 0:6926944333 is in state 'finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:27,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 13:04:31] 2025-12-11 18:03:28,249 | INFO     | time since job start (5472s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:29,960 | INFO     | monitor loop #359: job 0:6926944333 is in state 'finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:29,960 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 13:04:31] 2025-12-11 18:03:30,256 | INFO     | time since job start (5474s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:32,263 | INFO     | time since job start (5476s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:32,465 | INFO     | monitor loop #360: job 0:6926944333 is in state 'finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:32,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 13:04:31] 2025-12-11 18:03:34,225 | INFO     | PID=1747078 has CPU usage=10.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-11 13:04:31] 2025-12-11 18:03:34,225 | INFO     | .. there are 58 such processes running
[2025-12-11 13:04:31] 2025-12-11 18:03:34,970 | INFO     | monitor loop #361: job 0:6926944333 is in state 'finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:34,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 13:04:31] 2025-12-11 18:03:35,226 | INFO     | time since job start (5479s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:37,233 | INFO     | time since job start (5481s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:37,475 | INFO     | monitor loop #362: job 0:6926944333 is in state 'finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:37,475 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 13:04:31] 2025-12-11 18:03:39,240 | INFO     | time since job start (5483s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:39,979 | INFO     | monitor loop #363: job 0:6926944333 is in state 'finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:39,979 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 13:04:31] 2025-12-11 18:03:41,249 | INFO     | time since job start (5485s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:42,483 | INFO     | monitor loop #364: job 0:6926944333 is in state 'finished'
[2025-12-11 13:04:31] 2025-12-11 18:03:42,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 13:04:31] 2025-12-11 18:03:43,256 | INFO     | time since job start (5487s) is within the limit (174528.0s)
[2025-12-11 13:04:31] 2025-12-11 18:03:44,865 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-11 13:04:31] 2025-12-11 18:03:44,884 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.98959375
[2025-12-11 13:04:31] 2025-12-11 18:03:44,897 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6926944333/memory_monitor_summary.json (trf name=prmon)
[2025-12-11 13:04:31] 2025-12-11 18:03:44,897 | INFO     | extracted standard info from prmon json
[2025-12-11 13:04:31] 2025-12-11 18:03:44,897 | INFO     | extracted standard memory fields from prmon json
[2025-12-11 13:04:31] 2025-12-11 18:03:44,898 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-11 13:04:31] 2025-12-11 18:03:44,898 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-11 13:04:31] 2025-12-11 18:03:44,898 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-11 13:04:31] 2025-12-11 18:03:44,899 | INFO     | fitting pss+swap vs Time
[2025-12-11 13:04:31] 2025-12-11 18:03:44,899 | INFO     | sum of square deviations: 164763685.95061755
[2025-12-11 13:04:31] 2025-12-11 18:03:44,899 | INFO     | sum of deviations: -6388110742.80247
[2025-12-11 13:04:31] 2025-12-11 18:03:44,899 | INFO     | mean x: 1765473609.0246913
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | mean y: 2784155.901234568
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | intersect: 68452581590.78685
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | chi2: 0.6728071855054115
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | current memory leak: -38.77 B/s (using 81 data points, chi2=0.67)
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | ..............................
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | . Timing measurements:
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | . get job = 0 s
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | . initial setup = 5 s
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | . payload setup = 36 s
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | . stage-in = 0 s
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | . payload execution = 5362 s
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | . stage-out = 1 s
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | . log creation = 0 s
[2025-12-11 13:04:31] 2025-12-11 18:03:44,900 | INFO     | ..............................
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | 
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | job summary report
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | --------------------------------------------------
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | PanDA job id: 6926944333
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | task id: 47885665
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | errors: (none)
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | pilot state: finished 
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | transexitcode: 0
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | exeerrorcode: 0
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | exeerrordiag: 
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | exitcode: 0
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | exitmsg: OK
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | cpuconsumptiontime: 30267 s
[2025-12-11 13:04:31] 2025-12-11 18:03:44,951 | INFO     | nevents: 400
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | neventsw: 0
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | pid: 1768028
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | pgrp: 1768028
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | corecount: 11
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | event service: False
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | sizes: {0: 2283856, 1: 2284111, 2: 2284111, 12: 2284139, 23: 2284167, 31: 2284457, 34: 2284613, 5403: 2311171, 5405: 2320169, 5409: 2320225, 5430: 2320419}
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | --------------------------------------------------
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | 
[2025-12-11 13:04:31] 2025-12-11 18:03:44,952 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-11 13:04:31] 2025-12-11 18:03:45,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,005 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,005 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,005 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,005 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | job 6926944333 has completed (purged errors)
[2025-12-11 13:04:31] 2025-12-11 18:03:45,006 | INFO     | overall cleanup function is called
[2025-12-11 13:04:31] 2025-12-11 18:03:46,015 | INFO     | --- collectZombieJob: --- 10, [1768028]
[2025-12-11 13:04:31] 2025-12-11 18:03:46,015 | INFO     | zombie collector waiting for pid 1768028
[2025-12-11 13:04:31] 2025-12-11 18:03:46,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-11 13:04:31] 2025-12-11 18:03:46,015 | INFO     | collected zombie processes
[2025-12-11 13:04:31] 2025-12-11 18:03:46,015 | INFO     | will attempt to kill all subprocesses of pid=1768028
[2025-12-11 13:04:31] 2025-12-11 18:03:46,981 | INFO     | process IDs to be killed: [1768028] (in reverse order)
[2025-12-11 13:04:31] 2025-12-11 18:03:47,299 | WARNING  | found no corresponding commands to process id(s)
[2025-12-11 13:04:31] 2025-12-11 18:03:47,302 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-11 13:04:31] 2025-12-11 18:03:47,340 | INFO     | did not find any defunct processes belonging to 1768028
[2025-12-11 13:04:31] 2025-12-11 18:03:47,375 | INFO     | did not find any defunct processes belonging to 1768028
[2025-12-11 13:04:31] 2025-12-11 18:03:47,375 | INFO     | ready for new job
[2025-12-11 13:04:31] 2025-12-11 18:03:47,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-11 13:04:31] 2025-12-11 18:03:47,377 | INFO     | ***************************************
[2025-12-11 13:04:31] 2025-12-11 18:03:47,377 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-11 13:04:31] 2025-12-11 18:03:47,377 | INFO     | ***************************************
[2025-12-11 13:04:31] 2025-12-11 18:03:47,377 | INFO     | 
[2025-12-11 13:04:31] 2025-12-11 18:03:47,388 | INFO     | architecture information:
[2025-12-11 13:04:31] 2025-12-11 18:03:47,392 | INFO     | executing command: cat /etc/os-release
[2025-12-11 13:04:31] 2025-12-11 18:03:47,454 | INFO     | cat /etc/os-release:
[2025-12-11 13:04:31] NAME="CentOS Linux"
[2025-12-11 13:04:31] VERSION="7 (Core)"
[2025-12-11 13:04:31] ID="centos"
[2025-12-11 13:04:31] ID_LIKE="rhel fedora"
[2025-12-11 13:04:31] VERSION_ID="7"
[2025-12-11 13:04:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-11 13:04:31] ANSI_COLOR="0;31"
[2025-12-11 13:04:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-11 13:04:31] HOME_URL="https://www.centos.org/"
[2025-12-11 13:04:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-11 13:04:31] 
[2025-12-11 13:04:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-11 13:04:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-11 13:04:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-11 13:04:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-11 13:04:31] 
[2025-12-11 13:04:31] 2025-12-11 18:03:47,454 | INFO     | ***************************************
[2025-12-11 13:04:31] 2025-12-11 18:03:47,959 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-11 13:04:31] 2025-12-11 18:03:48,002 | INFO     | sufficient remaining disk space (172274745344 B)
[2025-12-11 13:04:31] 2025-12-11 18:03:48,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-11 13:04:31] 2025-12-11 18:03:48,002 | INFO     | current server update state: UPDATING_FINAL
[2025-12-11 13:04:31] 2025-12-11 18:03:48,002 | INFO     | update_server=False
[2025-12-11 13:04:31] 2025-12-11 18:03:48,002 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-11 13:04:31] 2025-12-11 18:03:48,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-11 13:04:31] 2025-12-11 18:03:48,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-11 13:04:31] 2025-12-11 18:03:48,294 | INFO     | all payload control threads have been joined
[2025-12-11 13:04:31] 2025-12-11 18:03:48,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-11 13:04:31] 2025-12-11 18:03:48,503 | INFO     | aborting loop
[2025-12-11 13:04:31] 2025-12-11 18:03:48,690 | INFO     | all data control threads have been joined
[2025-12-11 13:04:31] 2025-12-11 18:03:49,009 | INFO     | [job] retrieve thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,023 | INFO     | [payload] failed_post thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,036 | INFO     | [payload] validate_pre thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,198 | INFO     | all job control threads have been joined
[2025-12-11 13:04:31] 2025-12-11 18:03:49,304 | INFO     | [payload] control thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,509 | INFO     | [job] job monitor thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,591 | INFO     | [data] copytool_in thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,671 | INFO     | [payload] validate_post thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,696 | INFO     | [data] control thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,765 | INFO     | [job] validate thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:49,984 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-11 13:04:31] 2025-12-11 18:03:50,131 | INFO     | [payload] execute_payloads thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:50,204 | INFO     | [job] control thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:50,211 | INFO     | [data] copytool_out thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:50,341 | INFO     | [job] create_data_payload thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:50,990 | INFO     | [job] queue monitor thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:52,013 | INFO     | [data] queue_monitor thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:03:58,759 | INFO     | job.realtimelogging is not enabled
[2025-12-11 13:04:31] 2025-12-11 18:03:59,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-11 13:04:31] 2025-12-11 18:04:17,073 | INFO     | PID=1747078 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-11 13:04:31] 2025-12-11 18:04:17,075 | INFO     | .. there are 58 such processes running
[2025-12-11 13:04:31] 2025-12-11 18:04:17,076 | INFO     | found 0 job(s) in 20 queues
[2025-12-11 13:04:31] 2025-12-11 18:04:17,076 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-11 13:04:31] 2025-12-11 18:04:17,076 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-11 13:04:31] 2025-12-11 18:04:24,522 | INFO     | [monitor] cgroup control has ended
[2025-12-11 13:04:31] 2025-12-11 18:04:25,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140136477099840)>', '<ExcThread(monitor, started 140135848994560)>']
[2025-12-11 13:04:31] 2025-12-11 18:04:25,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-11 13:04:31] 2025-12-11 18:04:25,128 | INFO     | [monitor] control thread has ended
[2025-12-11 13:04:31] 2025-12-11 18:04:30,114 | INFO     | all workflow threads have been joined
[2025-12-11 13:04:31] 2025-12-11 18:04:30,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-11 13:04:31] 2025-12-11 18:04:30,114 | INFO     | traces error code: 0
[2025-12-11 13:04:31] 2025-12-11 18:04:30,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-11 13:04:31] 2025-12-11 18:04:30,479 [wrapper] ==== pilot stdout END ====
[2025-12-11 13:04:31] 2025-12-11 18:04:30,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-11 13:04:31] 2025-12-11 18:04:30,486 [wrapper] pilotpid: 1747078
[2025-12-11 13:04:31] 2025-12-11 18:04:30,495 [wrapper] Pilot exit status: 0
[2025-12-11 13:04:31] 2025-12-11 18:04:30,563 [wrapper] pandaids: 6926944333
[2025-12-11 13:04:31] 2025-12-11 18:04:30,693 [wrapper] cleanup supervisor_pilot 2145484 1747079
[2025-12-11 13:04:31] 2025-12-11 18:04:30,700 [wrapper] Test setup, not cleaning
[2025-12-11 13:04:31] 2025-12-11 18:04:30,716 [wrapper] apfmon messages muted
[2025-12-11 13:04:31] 2025-12-11 18:04:30,719 [wrapper] ==== wrapper stdout END ====
[2025-12-11 13:04:31] 2025-12-11 18:04:30,725 [wrapper] ==== wrapper stderr END ====
[2025-12-11 13:04:31]  *** Error codes and diagnostics ***
[2025-12-11 13:04:31]     "exeErrorCode": 0,
[2025-12-11 13:04:31]     "exeErrorDiag": "",
[2025-12-11 13:04:31]     "pilotErrorCode": 0,
[2025-12-11 13:04:31]     "pilotErrorDiag": "",
[2025-12-11 13:04:31]  *** Listing of results directory ***
[2025-12-11 13:04:31] total 494496
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas    579449 Dec 11 10:27 pilot3.tar.gz
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas      5112 Dec 11 10:45 queuedata.json
[2025-12-11 13:04:31] -rwx------. 1 boincer umatlas     36322 Dec 11 10:46 runpilot2-wrapper.sh
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas       100 Dec 11 11:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-11 13:04:31] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 11 11:30 run_atlas
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas       105 Dec 11 11:30 job.xml
[2025-12-11 13:04:31] -rw-r--r--. 2 boincer umatlas 292665802 Dec 11 11:30 EVNT.47885663._000008.pool.root.1
[2025-12-11 13:04:31] -rw-r--r--. 2 boincer umatlas     15847 Dec 11 11:30 start_atlas.sh
[2025-12-11 13:04:31] drwxrwx--x. 2 boincer umatlas      4096 Dec 11 11:30 shared
[2025-12-11 13:04:31] -rw-r--r--. 2 boincer umatlas    592418 Dec 11 11:30 input.tar.gz
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas         0 Dec 11 11:30 boinc_lockfile
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas      2618 Dec 11 11:31 pandaJob.out
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas        57 Dec 11 11:31 setup.sh.local
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas    990021 Dec 11 11:32 agis_schedconf.cvmfs.json
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas   1516240 Dec 11 11:32 agis_ddmendpoints.agis.ALL.json
[2025-12-11 13:04:31] drwx------. 5 boincer umatlas      4096 Dec 11 11:32 pilot3
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas      7171 Dec 11 13:01 init_data.xml
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas 207587037 Dec 11 13:02 HITS.47885665._000178.pool.root.1
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas       529 Dec 11 13:02 boinc_task_state.xml
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas      1040 Dec 11 13:03 memory_monitor_summary.json
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas    366011 Dec 11 13:03 log.47885665._000178.job.log.tgz.1
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas      7786 Dec 11 13:03 heartbeat.json
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas        95 Dec 11 13:04 pilot_heartbeat.json
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas      4897 Dec 11 13:04 pilotlog.txt
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas    735041 Dec 11 13:04 log.47885665._000178.job.log.1
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas      8192 Dec 11 13:04 boinc_mmap_file
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas        27 Dec 11 13:04 wrapper_checkpoint.txt
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas       357 Dec 11 13:04 output.list
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas       620 Dec 11 13:04 runtime_log
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas   1116160 Dec 11 13:04 result.tar.gz
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas      9339 Dec 11 13:04 runtime_log.err
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas       655 Dec 11 13:04 kqLKDmR3xn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4NNKDmhMgv5n.diag
[2025-12-11 13:04:31] -rw-r--r--. 1 boincer umatlas     16422 Dec 11 13:04 stderr.txt
[2025-12-11 13:04:31] HITS file was successfully produced:
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas 207587037 Dec 11 13:02 shared/HITS.pool.root.1
[2025-12-11 13:04:31]  *** Contents of shared directory: ***
[2025-12-11 13:04:31] total 490224
[2025-12-11 13:04:31] -rw-r--r--. 2 boincer umatlas 292665802 Dec 11 11:30 ATLAS.root_0
[2025-12-11 13:04:31] -rw-r--r--. 2 boincer umatlas     15847 Dec 11 11:30 start_atlas.sh
[2025-12-11 13:04:31] -rw-r--r--. 2 boincer umatlas    592418 Dec 11 11:30 input.tar.gz
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas 207587037 Dec 11 13:02 HITS.pool.root.1
[2025-12-11 13:04:31] -rw-------. 1 boincer umatlas   1116160 Dec 11 13:04 result.tar.gz
13:05:13 (1736775): run_atlas exited; CPU time 30448.419525
13:05:13 (1736775): called boinc_finish(0)

</stderr_txt>
]]>

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