Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:44:52 (2799894): wrapper (7.7.26015): starting
04:44:52 (2799894): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 04:44:52] Arguments: --nthreads 4
[2025-12-13 04:44:52] Threads: 4
[2025-12-13 04:44:52] Checking for CVMFS
[2025-12-13 04:44:52] No cvmfs_config command found, will try listing directly
[2025-12-13 04:44:52] CVMFS is ok
[2025-12-13 04:44:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 04:44:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 04:44:52] Further information can be found at the LHC@home message board.
[2025-12-13 04:44:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 04:44:52] Checking for apptainer binary...
[2025-12-13 04:44:52] which: no apptainer in ((null))
[2025-12-13 04:44:52] apptainer is not installed, using version from CVMFS
[2025-12-13 04:44:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 04:44:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-12-13 04:44:52] apptainer works
[2025-12-13 04:44:52] Set ATHENA_PROC_NUMBER=4
[2025-12-13 04:44:52] Set ATHENA_CORE_NUMBER=4
[2025-12-13 04:44:52] Starting ATLAS job with PandaID=6926947098
[2025-12-13 04:44:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 14:13:28]  *** The last 200 lines of the pilot log: ***
[2025-12-13 14:13:28] 2025-12-13 13:05:16,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,615 | INFO     | time since job start (33611s) is within the limit (174528.0s)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,818 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 14:13:28] 2025-12-13 13:05:17,839 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2711.4400625000003
[2025-12-13 14:13:28] 2025-12-13 13:05:17,864 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6926947098/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,864 | INFO     | extracted standard info from prmon json
[2025-12-13 14:13:28] 2025-12-13 13:05:17,865 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 14:13:28] 2025-12-13 13:05:17,865 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 14:13:28] 2025-12-13 13:05:17,875 | INFO     | fitting pss+swap vs Time
[2025-12-13 14:13:28] 2025-12-13 13:05:17,876 | INFO     | sum of square deviations: 51871856300.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,884 | INFO     | sum of deviations: 197470322766.00006
[2025-12-13 14:13:28] 2025-12-13 13:05:17,884 | INFO     | mean x: 1765614320.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,884 | INFO     | mean y: 2660537.4918330307
[2025-12-13 14:13:28] 2025-12-13 13:05:17,884 | INFO     | intersect: -6718834595.325916
[2025-12-13 14:13:28] 2025-12-13 13:05:17,885 | INFO     | chi2: 5.009197845217312
[2025-12-13 14:13:28] 2025-12-13 13:05:17,885 | INFO     | sum of square deviations: 50472509132.5
[2025-12-13 14:13:28] 2025-12-13 13:05:17,893 | INFO     | sum of deviations: 347831065088.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,893 | INFO     | mean x: 1765614167.5
[2025-12-13 14:13:28] 2025-12-13 13:05:17,893 | INFO     | mean y: 2676900.8608058607
[2025-12-13 14:13:28] 2025-12-13 13:05:17,893 | INFO     | intersect: -12165045032.751892
[2025-12-13 14:13:28] 2025-12-13 13:05:17,893 | INFO     | chi2: 2.376382799278947
[2025-12-13 14:13:28] 2025-12-13 13:05:17,894 | INFO     | current chi2=2.376382799278947 (change=52.55961388013706 %)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,894 | INFO     | sum of square deviations: 49098557790.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,901 | INFO     | sum of deviations: 348510523409.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,902 | INFO     | mean x: 1765614015.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,902 | INFO     | mean y: 2676970.5767097967
[2025-12-13 14:13:28] 2025-12-13 13:05:17,902 | INFO     | intersect: -12529973522.69791
[2025-12-13 14:13:28] 2025-12-13 13:05:17,902 | INFO     | chi2: 2.3514862847662825
[2025-12-13 14:13:28] 2025-12-13 13:05:17,903 | INFO     | current chi2=2.3514862847662825 (change=1.0476643123413751 %)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,903 | INFO     | right removable region: 540
[2025-12-13 14:13:28] 2025-12-13 13:05:17,904 | INFO     | sum of square deviations: 50472509132.5
[2025-12-13 14:13:28] 2025-12-13 13:05:17,911 | INFO     | sum of deviations: 65681906526.00004
[2025-12-13 14:13:28] 2025-12-13 13:05:17,911 | INFO     | mean x: 1765614472.5
[2025-12-13 14:13:28] 2025-12-13 13:05:17,911 | INFO     | mean y: 2674857.7655677656
[2025-12-13 14:13:28] 2025-12-13 13:05:17,911 | INFO     | intersect: -2294990281.8702927
[2025-12-13 14:13:28] 2025-12-13 13:05:17,912 | INFO     | chi2: 2.7227624776030575
[2025-12-13 14:13:28] 2025-12-13 13:05:17,912 | INFO     | current chi2=2.7227624776030575 (change=45.644740700295955 %)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,913 | INFO     | sum of square deviations: 49098557790.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,920 | INFO     | sum of deviations: 56250909476.99999
[2025-12-13 14:13:28] 2025-12-13 13:05:17,920 | INFO     | mean x: 1765614625.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,920 | INFO     | mean y: 2675903.3179297596
[2025-12-13 14:13:28] 2025-12-13 13:05:17,920 | INFO     | intersect: -2020141729.4714894
[2025-12-13 14:13:28] 2025-12-13 13:05:17,921 | INFO     | chi2: 2.719383085442227
[2025-12-13 14:13:28] 2025-12-13 13:05:17,921 | INFO     | current chi2=2.719383085442227 (change=0.12411630425454044 %)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,921 | INFO     | left removable region: 20
[2025-12-13 14:13:28] 2025-12-13 13:05:17,922 | INFO     | sum of square deviations: 43600036090.0
[2025-12-13 14:13:28] 2025-12-13 13:05:17,928 | INFO     | sum of deviations: 193760676635.00003
[2025-12-13 14:13:28] 2025-12-13 13:05:17,929 | INFO     | mean x: 1765614594.5
[2025-12-13 14:13:28] 2025-12-13 13:05:17,929 | INFO     | mean y: 2694300.696153846
[2025-12-13 14:13:28] 2025-12-13 13:05:17,929 | INFO     | intersect: -7843782656.358843
[2025-12-13 14:13:28] 2025-12-13 13:05:17,929 | INFO     | chi2: 0.02578337728230084
[2025-12-13 14:13:28] 2025-12-13 13:05:17,930 | INFO     | current memory leak: 4.44 B/s (using 520 data points, chi2=0.03)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,930 | INFO     | could have reported an average CPU frequency of 2651 MHz (22 samples)
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | ..............................
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | . Timing measurements:
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | . get job = 0 s
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | . initial setup = 1 s
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | . payload setup = 14 s
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | . stage-in = 0 s
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | . payload execution = 33561 s
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | . stage-out = 1 s
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | . log creation = 0 s
[2025-12-13 14:13:28] 2025-12-13 13:05:17,931 | INFO     | ..............................
[2025-12-13 14:13:28] 2025-12-13 13:05:18,033 | INFO     | 
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | job summary report
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | --------------------------------------------------
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | PanDA job id: 6926947098
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | task id: 47866640
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | errors: (none)
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | pilot state: finished 
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | transexitcode: 0
[2025-12-13 14:13:28] 2025-12-13 13:05:18,034 | INFO     | exeerrorcode: 0
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | exeerrordiag: 
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | exitcode: 0
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | exitmsg: OK
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | cpuconsumptiontime: 134101 s
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | nevents: 1000
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | neventsw: 0
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | pid: 2812445
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | pgrp: 2812445
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | corecount: 4
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | event service: False
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | sizes: {0: 2284641, 7: 2284903, 11: 2284931, 33579: 2344494, 33582: 2353512, 33584: 2353568, 33594: 2353942}
[2025-12-13 14:13:28] 2025-12-13 13:05:18,035 | INFO     | --------------------------------------------------
[2025-12-13 14:13:28] 2025-12-13 13:05:18,036 | INFO     | 
[2025-12-13 14:13:28] 2025-12-13 13:05:18,036 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-12-13 14:13:28] 2025-12-13 13:05:18,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,068 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 14:13:28] 2025-12-13 13:05:18,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,069 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 14:13:28] 2025-12-13 13:05:18,069 | INFO     | job 6926947098 has completed (purged errors)
[2025-12-13 14:13:28] 2025-12-13 13:05:18,069 | INFO     | overall cleanup function is called
[2025-12-13 14:13:28] 2025-12-13 13:05:19,087 | INFO     | --- collectZombieJob: --- 10, [2812445]
[2025-12-13 14:13:28] 2025-12-13 13:05:19,087 | INFO     | zombie collector waiting for pid 2812445
[2025-12-13 14:13:28] 2025-12-13 13:05:19,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 14:13:28] 2025-12-13 13:05:19,087 | INFO     | collected zombie processes
[2025-12-13 14:13:28] 2025-12-13 13:05:19,087 | INFO     | will attempt to kill all subprocesses of pid=2812445
[2025-12-13 14:13:28] 2025-12-13 13:05:19,860 | INFO     | process IDs to be killed: [2812445] (in reverse order)
[2025-12-13 14:13:28] 2025-12-13 13:05:20,144 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 14:13:28] 2025-12-13 13:05:20,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 14:13:28] 2025-12-13 13:05:20,177 | INFO     | did not find any defunct processes belonging to 2812445
[2025-12-13 14:13:28] 2025-12-13 13:05:20,207 | INFO     | did not find any defunct processes belonging to 2812445
[2025-12-13 14:13:28] 2025-12-13 13:05:20,208 | INFO     | ready for new job
[2025-12-13 14:13:28] 2025-12-13 13:05:20,208 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 14:13:28] 2025-12-13 13:05:20,212 | INFO     | ***************************************
[2025-12-13 14:13:28] 2025-12-13 13:05:20,212 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 14:13:28] 2025-12-13 13:05:20,212 | INFO     | ***************************************
[2025-12-13 14:13:28] 2025-12-13 13:05:20,212 | INFO     | 
[2025-12-13 14:13:28] 2025-12-13 13:05:20,221 | INFO     | architecture information:
[2025-12-13 14:13:28] 2025-12-13 13:05:20,222 | INFO     | executing command: cat /etc/os-release
[2025-12-13 14:13:28] 2025-12-13 13:05:20,242 | INFO     | cat /etc/os-release:
[2025-12-13 14:13:28] NAME="CentOS Linux"
[2025-12-13 14:13:28] VERSION="7 (Core)"
[2025-12-13 14:13:28] ID="centos"
[2025-12-13 14:13:28] ID_LIKE="rhel fedora"
[2025-12-13 14:13:28] VERSION_ID="7"
[2025-12-13 14:13:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 14:13:28] ANSI_COLOR="0;31"
[2025-12-13 14:13:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 14:13:28] HOME_URL="https://www.centos.org/"
[2025-12-13 14:13:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 14:13:28] 
[2025-12-13 14:13:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 14:13:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 14:13:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 14:13:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 14:13:28] 
[2025-12-13 14:13:28] 2025-12-13 13:05:20,243 | INFO     | ***************************************
[2025-12-13 14:13:28] 2025-12-13 13:05:20,746 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-12-13 14:13:28] 2025-12-13 13:05:20,774 | INFO     | sufficient remaining disk space (3237209964544 B)
[2025-12-13 14:13:28] 2025-12-13 13:05:20,775 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 14:13:28] 2025-12-13 13:05:20,775 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 14:13:28] 2025-12-13 13:05:20,775 | INFO     | update_server=False
[2025-12-13 14:13:28] 2025-12-13 13:05:20,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 14:13:28] 2025-12-13 13:05:21,208 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-13 14:13:28] 2025-12-13 13:05:21,208 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-13 14:13:28] 2025-12-13 13:05:21,208 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:13:28] 2025-12-13 13:05:21,208 | INFO     | will abort loop
[2025-12-13 14:13:28] 2025-12-13 13:05:21,409 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 14:13:28] 2025-12-13 13:05:21,416 | INFO     | all payload control threads have been joined
[2025-12-13 14:13:28] 2025-12-13 13:05:21,765 | INFO     | all data control threads have been joined
[2025-12-13 14:13:28] 2025-12-13 13:05:21,781 | INFO     | [job] retrieve thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:21,934 | INFO     | [payload] validate_post thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,213 | INFO     | [job] job monitor thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,235 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,259 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,275 | INFO     | [payload] failed_post thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,323 | INFO     | [job] validate thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,421 | INFO     | [payload] control thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,426 | INFO     | all job control threads have been joined
[2025-12-13 14:13:28] 2025-12-13 13:05:22,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 14:13:28] 2025-12-13 13:05:22,771 | INFO     | [data] control thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,813 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:22,829 | INFO     | [data] copytool_in thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:23,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 14:13:28] 2025-12-13 13:05:23,264 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:23,415 | INFO     | [data] copytool_out thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:23,433 | INFO     | [job] control thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:24,048 | INFO     | [job] queue monitor thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:26,576 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 14:13:28] 2025-12-13 13:05:51,729 | INFO     | PID=2804439 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-13 14:13:28] 2025-12-13 13:05:51,730 | INFO     | .. there are 8 such processes running
[2025-12-13 14:13:28] 2025-12-13 13:05:51,731 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 14:13:28] 2025-12-13 13:05:51,731 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 14:13:28] 2025-12-13 13:05:51,734 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 14:13:28] 2025-12-13 13:05:59,004 | INFO     | [monitor] cgroup control has ended
[2025-12-13 14:13:28] 2025-12-13 13:05:59,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22670787544896)>', '<ExcThread(monitor, started 22670542325504)>']
[2025-12-13 14:13:28] 2025-12-13 13:06:00,774 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 14:13:28] 2025-12-13 13:06:00,777 | INFO     | [monitor] control thread has ended
[2025-12-13 14:13:28] 2025-12-13 13:06:04,898 | INFO     | all workflow threads have been joined
[2025-12-13 14:13:28] 2025-12-13 13:06:04,898 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 14:13:28] 2025-12-13 13:06:04,898 | INFO     | traces error code: 0
[2025-12-13 14:13:28] 2025-12-13 13:06:04,898 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 14:13:28] 2025-12-13 13:06:05,048 [wrapper] ==== pilot stdout END ====
[2025-12-13 14:13:28] 2025-12-13 13:06:05,052 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 14:13:28] 2025-12-13 13:06:05,056 [wrapper] pilotpid: 2804439
[2025-12-13 14:13:28] 2025-12-13 13:06:05,060 [wrapper] Pilot exit status: 0
[2025-12-13 14:13:28] 2025-12-13 13:06:05,074 [wrapper] pandaids: 6926947098
[2025-12-13 14:13:28] 2025-12-13 13:06:05,241 [wrapper] cleanup supervisor_pilot 4005924 2804440
[2025-12-13 14:13:28] 2025-12-13 13:06:05,246 [wrapper] Test setup, not cleaning
[2025-12-13 14:13:28] 2025-12-13 13:06:05,250 [wrapper] apfmon messages muted
[2025-12-13 14:13:28] 2025-12-13 13:06:05,254 [wrapper] ==== wrapper stdout END ====
[2025-12-13 14:13:28] 2025-12-13 13:06:05,258 [wrapper] ==== wrapper stderr END ====
[2025-12-13 14:13:28]  *** Error codes and diagnostics ***
[2025-12-13 14:13:28]     "exeErrorCode": 0,
[2025-12-13 14:13:28]     "exeErrorDiag": "",
[2025-12-13 14:13:28]     "pilotErrorCode": 0,
[2025-12-13 14:13:28]     "pilotErrorDiag": "",
[2025-12-13 14:13:28]  *** Listing of results directory ***
[2025-12-13 14:13:28] total 1171416
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc    579449 Dec 11 16:27 pilot3.tar.gz
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc      5112 Dec 11 16:45 queuedata.json
[2025-12-13 14:13:28] -rwx------ 1 boinc boinc     36322 Dec 11 16:47 runpilot2-wrapper.sh
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc       100 Dec 12 06:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 14:13:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 12 06:22 run_atlas
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc       105 Dec 12 06:22 job.xml
[2025-12-13 14:13:28] -rw------- 2 boinc boinc 252379136 Dec 12 07:00 copy_p9voPc
[2025-12-13 14:13:28] -rw-r--r-- 2 boinc boinc 327514409 Dec 13 04:44 EVNT.47866638._000028.pool.root.1
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc      6692 Dec 13 04:44 init_data.xml
[2025-12-13 14:13:28] -rw-r--r-- 2 boinc boinc     15847 Dec 13 04:44 start_atlas.sh
[2025-12-13 14:13:28] drwxrwx--x 2 boinc boinc      4096 Dec 13 04:44 shared
[2025-12-13 14:13:28] -rw-r--r-- 2 boinc boinc    592613 Dec 13 04:44 input.tar.gz
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc         0 Dec 13 04:44 boinc_lockfile
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc      2897 Dec 13 04:44 pandaJob.out
[2025-12-13 14:13:28] -rw------- 1 boinc boinc    991720 Dec 13 04:45 agis_schedconf.cvmfs.json
[2025-12-13 14:13:28] drwx------ 5 boinc boinc      4096 Dec 13 04:45 pilot3
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc       531 Dec 13 13:59 boinc_task_state.xml
[2025-12-13 14:13:28] -rw------- 1 boinc boinc 603464615 Dec 13 14:04 HITS.47866640._000273.pool.root.1
[2025-12-13 14:13:28] -rw------- 1 boinc boinc      1037 Dec 13 14:05 memory_monitor_summary.json
[2025-12-13 14:13:28] -rw------- 1 boinc boinc   1516240 Dec 13 14:05 agis_ddmendpoints.agis.ALL.json
[2025-12-13 14:13:28] -rw------- 1 boinc boinc   1444994 Dec 13 14:05 log.47866640._000273.job.log.tgz.1
[2025-12-13 14:13:28] -rw------- 1 boinc boinc     27106 Dec 13 14:05 heartbeat.json
[2025-12-13 14:13:28] -rw------- 1 boinc boinc        95 Dec 13 14:05 pilot_heartbeat.json
[2025-12-13 14:13:28] -rw------- 1 boinc boinc      5022 Dec 13 14:06 pilotlog.txt
[2025-12-13 14:13:28] -rw------- 1 boinc boinc   4660010 Dec 13 14:06 log.47866640._000273.job.log.1
[2025-12-13 14:13:28] -rw------- 1 boinc boinc       353 Dec 13 14:06 output.list
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc       620 Dec 13 14:06 runtime_log
[2025-12-13 14:13:28] -rw------- 1 boinc boinc   6144000 Dec 13 14:06 result.tar.gz
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc      9223 Dec 13 14:06 runtime_log.err
[2025-12-13 14:13:28] -rw------- 1 boinc boinc       670 Dec 13 14:06 UmKLDmP4xn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmI5QKDmiv5kXo.diag
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc        28 Dec 13 14:13 wrapper_checkpoint.txt
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc      8192 Dec 13 14:13 boinc_mmap_file
[2025-12-13 14:13:28] -rw-r--r-- 1 boinc boinc     20944 Dec 13 14:13 stderr.txt
[2025-12-13 14:13:28] HITS file was successfully produced:
[2025-12-13 14:13:28] -rw------- 1 boinc boinc 603464615 Dec 13 14:04 shared/HITS.pool.root.1
[2025-12-13 14:13:28]  *** Contents of shared directory: ***
[2025-12-13 14:13:28] total 1162236
[2025-12-13 14:13:28] -rw------- 2 boinc boinc 252379136 Dec 12 07:00 copy_p9voPc
[2025-12-13 14:13:28] -rw-r--r-- 2 boinc boinc 327514409 Dec 13 04:44 ATLAS.root_0
[2025-12-13 14:13:28] -rw-r--r-- 2 boinc boinc     15847 Dec 13 04:44 start_atlas.sh
[2025-12-13 14:13:28] -rw-r--r-- 2 boinc boinc    592613 Dec 13 04:44 input.tar.gz
[2025-12-13 14:13:28] -rw------- 1 boinc boinc 603464615 Dec 13 14:04 HITS.pool.root.1
[2025-12-13 14:13:28] -rw------- 1 boinc boinc   6144000 Dec 13 14:06 result.tar.gz
14:13:29 (2799894): run_atlas exited; CPU time 135829.813404
14:13:29 (2799894): called boinc_finish(0)

</stderr_txt>
]]>

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