Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:03:53 (1114): wrapper (7.7.26015): starting
08:03:53 (1114): wrapper: running run_atlas (--nthreads 8)
[2025-12-12 08:03:53] Arguments: --nthreads 8
[2025-12-12 08:03:53] Threads: 8
[2025-12-12 08:03:53] Checking for CVMFS
[2025-12-12 08:03:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 08:03:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 08:03:54] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 08:03:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 08:03:55] 2.11.2.0 1415 106904 146168 153914 3 267 21443143 25165824 4237 130560 313 32597782 99.834 24237643 1824 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-12 08:03:55] CVMFS is ok
[2025-12-12 08:03:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 08:03:55] Checking for apptainer binary...
[2025-12-12 08:03:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 08:03:55] Running /usr/bin/apptainer --version
[2025-12-12 08:03:55] apptainer version 1.3.2-1.el7
[2025-12-12 08:03:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 08:04:00] cg-vwn377.simple-grid.lan
[2025-12-12 08:04:00] apptainer works
[2025-12-12 08:04:00] Set ATHENA_PROC_NUMBER=8
[2025-12-12 08:04:00] Set ATHENA_CORE_NUMBER=8
[2025-12-12 08:04:00] Starting ATLAS job with PandaID=6926945755
[2025-12-12 08:04:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 01:05:51]  *** The last 200 lines of the pilot log: ***
[2025-12-13 01:05:51] 2025-12-13 00:04:42,013 | INFO     | time since job start (61008s) is within the limit (174528.0s)
[2025-12-13 01:05:51] 2025-12-13 00:04:42,549 | INFO     | monitor loop #4178: job 0:6926945755 is in state 'finished'
[2025-12-13 01:05:51] 2025-12-13 00:04:42,550 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 01:05:51] 2025-12-13 00:04:44,023 | INFO     | time since job start (61010s) is within the limit (174528.0s)
[2025-12-13 01:05:51] 2025-12-13 00:04:45,055 | INFO     | monitor loop #4179: job 0:6926945755 is in state 'finished'
[2025-12-13 01:05:51] 2025-12-13 00:04:45,056 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 01:05:51] 2025-12-13 00:04:46,030 | INFO     | time since job start (61012s) is within the limit (174528.0s)
[2025-12-13 01:05:51] 2025-12-13 00:04:47,562 | INFO     | monitor loop #4180: job 0:6926945755 is in state 'finished'
[2025-12-13 01:05:51] 2025-12-13 00:04:47,563 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 01:05:51] 2025-12-13 00:04:48,037 | INFO     | time since job start (61014s) is within the limit (174528.0s)
[2025-12-13 01:05:51] 2025-12-13 00:04:50,050 | INFO     | time since job start (61016s) is within the limit (174528.0s)
[2025-12-13 01:05:51] 2025-12-13 00:04:50,084 | INFO     | monitor loop #4181: job 0:6926945755 is in state 'finished'
[2025-12-13 01:05:51] 2025-12-13 00:04:50,085 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 01:05:51] 2025-12-13 00:04:52,058 | INFO     | time since job start (61018s) is within the limit (174528.0s)
[2025-12-13 01:05:51] 2025-12-13 00:04:52,598 | INFO     | monitor loop #4182: job 0:6926945755 is in state 'finished'
[2025-12-13 01:05:51] 2025-12-13 00:04:52,599 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 01:05:51] 2025-12-13 00:04:53,652 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-13 01:05:51] 2025-12-13 00:04:53,653 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-13 01:05:51] 2025-12-13 00:04:53,655 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6926945755/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 01:05:51] 2025-12-13 00:04:53,656 | INFO     | extracted standard info from prmon json
[2025-12-13 01:05:51] 2025-12-13 00:04:53,656 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 01:05:51] 2025-12-13 00:04:53,656 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 01:05:51] 2025-12-13 00:04:53,697 | INFO     | fitting pss+swap vs Time
[2025-12-13 01:05:51] 2025-12-13 00:04:53,716 | INFO     | sum of square deviations: 299059292438.85864
[2025-12-13 01:05:51] 2025-12-13 00:04:53,779 | INFO     | sum of deviations: 1051858847283.514
[2025-12-13 01:05:51] 2025-12-13 00:04:53,779 | INFO     | mean x: 1765554030.9149797
[2025-12-13 01:05:51] 2025-12-13 00:04:53,780 | INFO     | mean y: 3240321.9585020244
[2025-12-13 01:05:51] 2025-12-13 00:04:53,780 | INFO     | intersect: -6206610616.395708
[2025-12-13 01:05:51] 2025-12-13 00:04:53,781 | INFO     | chi2: 24.568608723235375
[2025-12-13 01:05:51] 2025-12-13 00:04:53,783 | INFO     | sum of square deviations: 294542369003.79663
[2025-12-13 01:05:51] 2025-12-13 00:04:53,813 | INFO     | sum of deviations: 1449513040004.2542
[2025-12-13 01:05:51] 2025-12-13 00:04:53,814 | INFO     | mean x: 1765553878.422177
[2025-12-13 01:05:51] 2025-12-13 00:04:53,814 | INFO     | mean y: 3253745.8138351985
[2025-12-13 01:05:51] 2025-12-13 00:04:53,814 | INFO     | intersect: -8685456738.381542
[2025-12-13 01:05:51] 2025-12-13 00:04:53,815 | INFO     | chi2: 20.897453855822153
[2025-12-13 01:05:51] 2025-12-13 00:04:53,815 | INFO     | current chi2=20.897453855822153 (change=14.942461369175067 %)
[2025-12-13 01:05:51] 2025-12-13 00:04:53,815 | INFO     | right removable region: 982
[2025-12-13 01:05:51] 2025-12-13 00:04:53,817 | INFO     | sum of square deviations: 294541516223.79645
[2025-12-13 01:05:51] 2025-12-13 00:04:53,841 | INFO     | sum of deviations: 568937954748.9972
[2025-12-13 01:05:51] 2025-12-13 00:04:53,842 | INFO     | mean x: 1765554183.422177
[2025-12-13 01:05:51] 2025-12-13 00:04:53,842 | INFO     | mean y: 3256623.4313326553
[2025-12-13 01:05:51] 2025-12-13 00:04:53,842 | INFO     | intersect: -3407097200.345157
[2025-12-13 01:05:51] 2025-12-13 00:04:53,844 | INFO     | chi2: 19.650209383127592
[2025-12-13 01:05:51] 2025-12-13 00:04:53,860 | INFO     | current chi2=19.650209383127592 (change=20.019038910641626 %)
[2025-12-13 01:05:51] 2025-12-13 00:04:53,861 | INFO     | left removable region: 10
[2025-12-13 01:05:51] 2025-12-13 00:04:53,862 | INFO     | sum of square deviations: 284764045130.296
[2025-12-13 01:05:51] 2025-12-13 00:04:53,888 | INFO     | sum of deviations: 643038543286.0847
[2025-12-13 01:05:51] 2025-12-13 00:04:53,889 | INFO     | mean x: 1765554152.9382715
[2025-12-13 01:05:51] 2025-12-13 00:04:53,889 | INFO     | mean y: 3287622.884773663
[2025-12-13 01:05:51] 2025-12-13 00:04:53,889 | INFO     | intersect: -3983589899.0953946
[2025-12-13 01:05:51] 2025-12-13 00:04:53,891 | INFO     | chi2: 11.440163506159733
[2025-12-13 01:05:51] 2025-12-13 00:04:53,891 | INFO     | current memory leak: 2.26 B/s (using 972 data points, chi2=11.44)
[2025-12-13 01:05:51] 2025-12-13 00:04:53,894 | INFO     | could have reported an average CPU frequency of 1999 MHz (35 samples)
[2025-12-13 01:05:51] 2025-12-13 00:04:53,894 | INFO     | ..............................
[2025-12-13 01:05:51] 2025-12-13 00:04:53,894 | INFO     | . Timing measurements:
[2025-12-13 01:05:51] 2025-12-13 00:04:53,895 | INFO     | . get job = 0 s
[2025-12-13 01:05:51] 2025-12-13 00:04:53,895 | INFO     | . initial setup = 5 s
[2025-12-13 01:05:51] 2025-12-13 00:04:53,895 | INFO     | . payload setup = 306 s
[2025-12-13 01:05:51] 2025-12-13 00:04:53,895 | INFO     | . stage-in = 0 s
[2025-12-13 01:05:51] 2025-12-13 00:04:53,895 | INFO     | . payload execution = 60423 s
[2025-12-13 01:05:51] 2025-12-13 00:04:53,895 | INFO     | . stage-out = 5 s
[2025-12-13 01:05:51] 2025-12-13 00:04:53,895 | INFO     | . log creation = 2 s
[2025-12-13 01:05:51] 2025-12-13 00:04:53,895 | INFO     | ..............................
[2025-12-13 01:05:51] 2025-12-13 00:04:54,037 | INFO     | 
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | job summary report
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | --------------------------------------------------
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | PanDA job id: 6926945755
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | task id: 47866640
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | errors: (none)
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | pilot state: finished 
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | transexitcode: 0
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | exeerrorcode: 0
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | exeerrordiag: 
[2025-12-13 01:05:51] 2025-12-13 00:04:54,038 | INFO     | exitcode: 0
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | exitmsg: OK
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | cpuconsumptiontime: 221591 s
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | nevents: 1000
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | neventsw: 0
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | pid: 12257
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | pgrp: 12257
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | corecount: 8
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | event service: False
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | sizes: {0: 2283801, 1: 2284486, 2: 2284685, 13: 2284685, 24: 2284741, 34: 2284769, 45: 2284925, 56: 2284953, 66: 2284981, 77: 2285009, 87: 2285327, 88: 2285635, 60
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | --------------------------------------------------
[2025-12-13 01:05:51] 2025-12-13 00:04:54,039 | INFO     | 
[2025-12-13 01:05:51] 2025-12-13 00:04:54,040 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-12-13 01:05:51] 2025-12-13 00:04:54,072 | INFO     | time since job start (61020s) is within the limit (174528.0s)
[2025-12-13 01:05:51] 2025-12-13 00:04:54,643 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,643 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,643 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,645 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,645 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,645 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 01:05:51] 2025-12-13 00:04:54,645 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,645 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 01:05:51] 2025-12-13 00:04:54,645 | INFO     | job 6926945755 has completed (purged errors)
[2025-12-13 01:05:51] 2025-12-13 00:04:54,645 | INFO     | overall cleanup function is called
[2025-12-13 01:05:51] 2025-12-13 00:04:55,672 | INFO     | --- collectZombieJob: --- 10, [12257]
[2025-12-13 01:05:51] 2025-12-13 00:04:55,672 | INFO     | zombie collector waiting for pid 12257
[2025-12-13 01:05:51] 2025-12-13 00:04:55,673 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 01:05:51] 2025-12-13 00:04:55,673 | INFO     | collected zombie processes
[2025-12-13 01:05:51] 2025-12-13 00:04:55,673 | INFO     | will attempt to kill all subprocesses of pid=12257
[2025-12-13 01:05:51] 2025-12-13 00:04:55,797 | INFO     | process IDs to be killed: [12257] (in reverse order)
[2025-12-13 01:05:51] 2025-12-13 00:04:56,746 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 01:05:51] 2025-12-13 00:04:56,747 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 01:05:51] 2025-12-13 00:04:56,753 | INFO     | did not find any defunct processes belonging to 12257
[2025-12-13 01:05:51] 2025-12-13 00:04:56,758 | INFO     | did not find any defunct processes belonging to 12257
[2025-12-13 01:05:51] 2025-12-13 00:04:56,758 | INFO     | ready for new job
[2025-12-13 01:05:51] 2025-12-13 00:04:56,759 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 01:05:51] 2025-12-13 00:04:56,766 | INFO     | ***************************************
[2025-12-13 01:05:51] 2025-12-13 00:04:56,766 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 01:05:51] 2025-12-13 00:04:56,766 | INFO     | ***************************************
[2025-12-13 01:05:51] 2025-12-13 00:04:56,766 | INFO     | 
[2025-12-13 01:05:51] 2025-12-13 00:04:56,767 | INFO     | pilot is running in a VM
[2025-12-13 01:05:51] 2025-12-13 00:04:56,767 | INFO     | architecture information:
[2025-12-13 01:05:51] 2025-12-13 00:04:56,768 | INFO     | executing command: cat /etc/os-release
[2025-12-13 01:05:51] 2025-12-13 00:04:57,004 | INFO     | cat /etc/os-release:
[2025-12-13 01:05:51] NAME="CentOS Linux"
[2025-12-13 01:05:51] VERSION="7 (Core)"
[2025-12-13 01:05:51] ID="centos"
[2025-12-13 01:05:51] ID_LIKE="rhel fedora"
[2025-12-13 01:05:51] VERSION_ID="7"
[2025-12-13 01:05:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 01:05:51] ANSI_COLOR="0;31"
[2025-12-13 01:05:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 01:05:51] HOME_URL="https://www.centos.org/"
[2025-12-13 01:05:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 01:05:51] 
[2025-12-13 01:05:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 01:05:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 01:05:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 01:05:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 01:05:51] 
[2025-12-13 01:05:51] 2025-12-13 00:04:57,005 | INFO     | ***************************************
[2025-12-13 01:05:51] 2025-12-13 00:04:57,507 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-12-13 01:05:51] 2025-12-13 00:04:57,825 | INFO     | sufficient remaining disk space (496124297216 B)
[2025-12-13 01:05:51] 2025-12-13 00:04:57,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 01:05:51] 2025-12-13 00:04:57,826 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 01:05:51] 2025-12-13 00:04:57,826 | INFO     | update_server=False
[2025-12-13 01:05:51] 2025-12-13 00:04:57,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 01:05:51] 2025-12-13 00:04:57,931 | INFO     | all data control threads have been joined
[2025-12-13 01:05:51] 2025-12-13 00:04:57,943 | INFO     | all job control threads have been joined
[2025-12-13 01:05:51] 2025-12-13 00:04:58,022 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 01:05:51] 2025-12-13 00:04:58,023 | INFO     | all payload control threads have been joined
[2025-12-13 01:05:51] 2025-12-13 00:04:58,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 01:05:51] 2025-12-13 00:04:58,631 | INFO     | aborting loop
[2025-12-13 01:05:51] 2025-12-13 00:04:58,832 | INFO     | [job] retrieve thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:04:58,937 | INFO     | [data] control thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:04:58,949 | INFO     | [job] control thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:04:59,035 | INFO     | [payload] control thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:04:59,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 01:05:51] 2025-12-13 00:04:59,177 | INFO     | [payload] failed_post thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:04:59,237 | INFO     | [job] validate thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:04:59,288 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:04:59,636 | INFO     | [job] job monitor thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:04:59,807 | INFO     | [data] copytool_in thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:05:00,035 | INFO     | [data] copytool_out thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:05:00,057 | INFO     | [job] queue monitor thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:05:00,158 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 01:05:51] 2025-12-13 00:05:00,258 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:05:00,291 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:05:00,292 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:05:00,429 | INFO     | [payload] validate_post thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:05:04,168 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 01:05:51] 2025-12-13 00:05:27,306 | INFO     | PID=4982 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-13 01:05:51] 2025-12-13 00:05:27,307 | INFO     | .. there are 9 such processes running
[2025-12-13 01:05:51] 2025-12-13 00:05:27,309 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 01:05:51] 2025-12-13 00:05:27,309 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 01:05:51] 2025-12-13 00:05:27,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 01:05:51] 2025-12-13 00:05:40,067 | INFO     | [monitor] cgroup control has ended
[2025-12-13 01:05:51] 2025-12-13 00:05:41,204 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139632201807680)>', '<ExcThread(monitor, started 139631752353536)>']
[2025-12-13 01:05:51] 2025-12-13 00:05:41,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 01:05:51] 2025-12-13 00:05:41,393 | INFO     | [monitor] control thread has ended
[2025-12-13 01:05:51] 2025-12-13 00:05:46,231 | INFO     | all workflow threads have been joined
[2025-12-13 01:05:51] 2025-12-13 00:05:46,232 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 01:05:51] 2025-12-13 00:05:46,232 | INFO     | traces error code: 0
[2025-12-13 01:05:51] 2025-12-13 00:05:46,232 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 01:05:51] 2025-12-13 00:05:46,854 [wrapper] ==== pilot stdout END ====
[2025-12-13 01:05:51] 2025-12-13 00:05:46,950 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 01:05:51] 2025-12-13 00:05:47,068 [wrapper] pilotpid: 4982
[2025-12-13 01:05:51] 2025-12-13 00:05:47,174 [wrapper] Pilot exit status: 0
[2025-12-13 01:05:51] 2025-12-13 00:05:47,659 [wrapper] pandaids: 6926945755
[2025-12-13 01:05:51] 2025-12-13 00:05:48,425 [wrapper] cleanup supervisor_pilot 26084 4983
[2025-12-13 01:05:51] 2025-12-13 00:05:48,499 [wrapper] Test setup, not cleaning
[2025-12-13 01:05:51] 2025-12-13 00:05:48,604 [wrapper] apfmon messages muted
[2025-12-13 01:05:51] 2025-12-13 00:05:48,666 [wrapper] ==== wrapper stdout END ====
[2025-12-13 01:05:51] 2025-12-13 00:05:48,721 [wrapper] ==== wrapper stderr END ====
[2025-12-13 01:05:51]  *** Error codes and diagnostics ***
[2025-12-13 01:05:51]     "exeErrorCode": 0,
[2025-12-13 01:05:51]     "exeErrorDiag": "",
[2025-12-13 01:05:51]     "pilotErrorCode": 0,
[2025-12-13 01:05:51]     "pilotErrorDiag": "",
[2025-12-13 01:05:51]  *** Listing of results directory ***
[2025-12-13 01:05:51] total 937408
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc    579449 Dec 11 16:27 pilot3.tar.gz
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc      5112 Dec 11 16:45 queuedata.json
[2025-12-13 01:05:51] -rwx------. 1 boinc boinc     36322 Dec 11 16:47 runpilot2-wrapper.sh
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc       100 Dec 12 08:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 01:05:51] -rwxr-xr-x. 1 boinc boinc      7986 Dec 12 08:03 run_atlas
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc       105 Dec 12 08:03 job.xml
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc      6392 Dec 12 08:03 init_data.xml
[2025-12-13 01:05:51] -rw-r--r--. 2 boinc boinc 326452608 Dec 12 08:03 EVNT.47866638._000024.pool.root.1
[2025-12-13 01:05:51] -rw-r--r--. 2 boinc boinc     15847 Dec 12 08:03 start_atlas.sh
[2025-12-13 01:05:51] drwxrwx--x. 2 boinc boinc        68 Dec 12 08:03 shared
[2025-12-13 01:05:51] -rw-r--r--. 2 boinc boinc    592619 Dec 12 08:03 input.tar.gz
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc         0 Dec 12 08:03 boinc_lockfile
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc      2897 Dec 12 08:04 pandaJob.out
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc    990114 Dec 12 08:07 agis_schedconf.cvmfs.json
[2025-12-13 01:05:51] drwx------. 5 boinc boinc      4096 Dec 12 08:07 pilot3
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc       533 Dec 13 00:39 boinc_task_state.xml
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc 608737071 Dec 13 01:02 HITS.47866640._000234.pool.root.1
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc      1029 Dec 13 01:02 memory_monitor_summary.json
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc   1516240 Dec 13 01:03 agis_ddmendpoints.agis.ALL.json
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc   2255328 Dec 13 01:03 log.47866640._000234.job.log.tgz.1
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc     27520 Dec 13 01:04 heartbeat.json
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc      8192 Dec 13 01:05 boinc_mmap_file
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc        29 Dec 13 01:05 wrapper_checkpoint.txt
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc        95 Dec 13 01:05 pilot_heartbeat.json
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc      4883 Dec 13 01:05 pilotlog.txt
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc   8134730 Dec 13 01:05 log.47866640._000234.job.log.1
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc       353 Dec 13 01:05 output.list
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc       620 Dec 13 01:05 runtime_log
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc  10424320 Dec 13 01:05 result.tar.gz
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc      8817 Dec 13 01:05 runtime_log.err
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc       661 Dec 13 01:05 kEKODmO4xn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmj4QKDmAgoGPm.diag
[2025-12-13 01:05:51] -rw-r--r--. 1 boinc boinc     21339 Dec 13 01:05 stderr.txt
[2025-12-13 01:05:51] HITS file was successfully produced:
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc 608737071 Dec 13 01:02 shared/HITS.pool.root.1
[2025-12-13 01:05:51]  *** Contents of shared directory: ***
[2025-12-13 01:05:51] total 924052
[2025-12-13 01:05:51] -rw-r--r--. 2 boinc boinc 326452608 Dec 12 08:03 ATLAS.root_0
[2025-12-13 01:05:51] -rw-r--r--. 2 boinc boinc     15847 Dec 12 08:03 start_atlas.sh
[2025-12-13 01:05:51] -rw-r--r--. 2 boinc boinc    592619 Dec 12 08:03 input.tar.gz
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc 608737071 Dec 13 01:02 HITS.pool.root.1
[2025-12-13 01:05:51] -rw-------. 1 boinc boinc  10424320 Dec 13 01:05 result.tar.gz
01:05:53 (1114): run_atlas exited; CPU time 221629.652768
01:05:53 (1114): called boinc_finish(0)

</stderr_txt>
]]>

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