Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:47:53 (1416841): wrapper (7.7.26015): starting
01:47:53 (1416841): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 01:47:53] Arguments: --nthreads 4
[2025-12-14 01:47:53] Threads: 4
[2025-12-14 01:47:53] Checking for CVMFS
[2025-12-14 01:47:53] No cvmfs_config command found, will try listing directly
[2025-12-14 01:47:53] CVMFS is ok
[2025-12-14 01:47:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 01:47:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 01:47:53] Further information can be found at the LHC@home message board.
[2025-12-14 01:47:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 01:47:53] Checking for apptainer binary...
[2025-12-14 01:47:53] which: no apptainer in ((null))
[2025-12-14 01:47:53] apptainer is not installed, using version from CVMFS
[2025-12-14 01:47:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 01:47:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-12-14 01:47:53] apptainer works
[2025-12-14 01:47:54] Set ATHENA_PROC_NUMBER=4
[2025-12-14 01:47:54] Set ATHENA_CORE_NUMBER=4
[2025-12-14 01:47:54] Starting ATLAS job with PandaID=6926944237
[2025-12-14 01:47:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-14 05:52:26]  *** The last 200 lines of the pilot log: ***
[2025-12-14 05:52:26] 2025-12-14 04:47:55,914 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6926944237/memory_monitor_summary.json (trf name=prmon)
[2025-12-14 05:52:26] 2025-12-14 04:47:55,915 | INFO     | extracted standard info from prmon json
[2025-12-14 05:52:26] 2025-12-14 04:47:55,915 | INFO     | extracted standard memory fields from prmon json
[2025-12-14 05:52:26] 2025-12-14 04:47:55,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-14 05:52:26] 2025-12-14 04:47:55,916 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-14 05:52:26] 2025-12-14 04:47:55,916 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-14 05:52:26] 2025-12-14 04:47:55,920 | INFO     | fitting pss+swap vs Time
[2025-12-14 05:52:26] 2025-12-14 04:47:55,921 | INFO     | sum of square deviations: 4075741535.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,923 | INFO     | sum of deviations: 2148395020.500002
[2025-12-14 05:52:26] 2025-12-14 04:47:55,923 | INFO     | mean x: 1765680494.5
[2025-12-14 05:52:26] 2025-12-14 04:47:55,923 | INFO     | mean y: 2345274.656779661
[2025-12-14 05:52:26] 2025-12-14 04:47:55,923 | INFO     | intersect: -928375957.1982185
[2025-12-14 05:52:26] 2025-12-14 04:47:55,923 | INFO     | chi2: 2.0090257013445845
[2025-12-14 05:52:26] 2025-12-14 04:47:55,924 | INFO     | sum of square deviations: 3822136780.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,926 | INFO     | sum of deviations: 15566961551.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,926 | INFO     | mean x: 1765680342.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,926 | INFO     | mean y: 2353202.285714286
[2025-12-14 05:52:26] 2025-12-14 04:47:55,926 | INFO     | intersect: -7188984935.872316
[2025-12-14 05:52:26] 2025-12-14 04:47:55,926 | INFO     | chi2: 1.3453102003558894
[2025-12-14 05:52:26] 2025-12-14 04:47:55,926 | INFO     | current chi2=1.3453102003558894 (change=33.03668542142039 %)
[2025-12-14 05:52:26] 2025-12-14 04:47:55,927 | INFO     | sum of square deviations: 3579276412.5
[2025-12-14 05:52:26] 2025-12-14 04:47:55,929 | INFO     | sum of deviations: 15057882268.999998
[2025-12-14 05:52:26] 2025-12-14 04:47:55,929 | INFO     | mean x: 1765680189.5
[2025-12-14 05:52:26] 2025-12-14 04:47:55,929 | INFO     | mean y: 2352882.5663716816
[2025-12-14 05:52:26] 2025-12-14 04:47:55,929 | INFO     | intersect: -7425797769.712039
[2025-12-14 05:52:26] 2025-12-14 04:47:55,930 | INFO     | chi2: 1.3458202440716707
[2025-12-14 05:52:26] 2025-12-14 04:47:55,930 | INFO     | current chi2=1.3458202440716707 (change=-0.03791272196154465 %)
[2025-12-14 05:52:26] 2025-12-14 04:47:55,930 | INFO     | right removable region: 225
[2025-12-14 05:52:26] 2025-12-14 04:47:55,930 | INFO     | sum of square deviations: 3822136780.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,932 | INFO     | sum of deviations: -26254670596.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,932 | INFO     | mean x: 1765680647.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,932 | INFO     | mean y: 2362146.6363636362
[2025-12-14 05:52:26] 2025-12-14 04:47:55,932 | INFO     | intersect: 12131013326.073524
[2025-12-14 05:52:26] 2025-12-14 04:47:55,933 | INFO     | chi2: 0.7261333624251801
[2025-12-14 05:52:26] 2025-12-14 04:47:55,933 | INFO     | current chi2=0.7261333624251801 (change=63.85644235714858 %)
[2025-12-14 05:52:26] 2025-12-14 04:47:55,933 | INFO     | sum of square deviations: 3579276412.5
[2025-12-14 05:52:26] 2025-12-14 04:47:55,935 | INFO     | sum of deviations: -22560007468.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,935 | INFO     | mean x: 1765680799.5
[2025-12-14 05:52:26] 2025-12-14 04:47:55,935 | INFO     | mean y: 2359813.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,935 | INFO     | intersect: 11131361161.907196
[2025-12-14 05:52:26] 2025-12-14 04:47:55,935 | INFO     | chi2: 0.7183018675052263
[2025-12-14 05:52:26] 2025-12-14 04:47:55,936 | INFO     | current chi2=0.7183018675052263 (change=1.078520189982426 %)
[2025-12-14 05:52:26] 2025-12-14 04:47:55,936 | INFO     | left removable region: 20
[2025-12-14 05:52:26] 2025-12-14 04:47:55,936 | INFO     | sum of square deviations: 2671343110.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,937 | INFO     | sum of deviations: -633200557.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,938 | INFO     | mean x: 1765680769.0
[2025-12-14 05:52:26] 2025-12-14 04:47:55,938 | INFO     | mean y: 2362130.6146341464
[2025-12-14 05:52:26] 2025-12-14 04:47:55,938 | INFO     | intersect: 420889440.80167645
[2025-12-14 05:52:26] 2025-12-14 04:47:55,938 | INFO     | chi2: 0.011751195558404086
[2025-12-14 05:52:26] 2025-12-14 04:47:55,938 | INFO     | current memory leak: -0.24 B/s (using 205 data points, chi2=0.01)
[2025-12-14 05:52:26] 2025-12-14 04:47:55,939 | INFO     | could have reported an average CPU frequency of 2663 MHz (11 samples)
[2025-12-14 05:52:26] 2025-12-14 04:47:55,939 | INFO     | ..............................
[2025-12-14 05:52:26] 2025-12-14 04:47:55,939 | INFO     | . Timing measurements:
[2025-12-14 05:52:26] 2025-12-14 04:47:55,939 | INFO     | . get job = 0 s
[2025-12-14 05:52:26] 2025-12-14 04:47:55,939 | INFO     | . initial setup = 1 s
[2025-12-14 05:52:26] 2025-12-14 04:47:55,940 | INFO     | . payload setup = 9 s
[2025-12-14 05:52:26] 2025-12-14 04:47:55,940 | INFO     | . stage-in = 0 s
[2025-12-14 05:52:26] 2025-12-14 04:47:55,940 | INFO     | . payload execution = 14344 s
[2025-12-14 05:52:26] 2025-12-14 04:47:55,940 | INFO     | . stage-out = 1 s
[2025-12-14 05:52:26] 2025-12-14 04:47:55,940 | INFO     | . log creation = 0 s
[2025-12-14 05:52:26] 2025-12-14 04:47:55,940 | INFO     | ..............................
[2025-12-14 05:52:26] 2025-12-14 04:47:56,460 | INFO     | 
[2025-12-14 05:52:26] 2025-12-14 04:47:56,460 | INFO     | job summary report
[2025-12-14 05:52:26] 2025-12-14 04:47:56,460 | INFO     | --------------------------------------------------
[2025-12-14 05:52:26] 2025-12-14 04:47:56,460 | INFO     | PanDA job id: 6926944237
[2025-12-14 05:52:26] 2025-12-14 04:47:56,460 | INFO     | task id: 47885665
[2025-12-14 05:52:26] 2025-12-14 04:47:56,460 | INFO     | errors: (none)
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | pilot state: finished 
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | transexitcode: 0
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | exeerrorcode: 0
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | exeerrordiag: 
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | exitcode: 0
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | exitmsg: OK
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | cpuconsumptiontime: 55817 s
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | nevents: 400
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | neventsw: 0
[2025-12-14 05:52:26] 2025-12-14 04:47:56,461 | INFO     | pid: 1429013
[2025-12-14 05:52:26] 2025-12-14 04:47:56,462 | INFO     | pgrp: 1429013
[2025-12-14 05:52:26] 2025-12-14 04:47:56,462 | INFO     | corecount: 4
[2025-12-14 05:52:26] 2025-12-14 04:47:56,462 | INFO     | event service: False
[2025-12-14 05:52:26] 2025-12-14 04:47:56,462 | INFO     | sizes: {0: 2283922, 1: 2284121, 8: 2284383, 11: 2284411, 14358: 2315580, 14359: 2324786, 14367: 2324924}
[2025-12-14 05:52:26] 2025-12-14 04:47:56,462 | INFO     | --------------------------------------------------
[2025-12-14 05:52:26] 2025-12-14 04:47:56,462 | INFO     | 
[2025-12-14 05:52:26] 2025-12-14 04:47:56,462 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-12-14 05:52:26] 2025-12-14 04:47:56,492 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,492 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,492 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | job 6926944237 has completed (purged errors)
[2025-12-14 05:52:26] 2025-12-14 04:47:56,494 | INFO     | overall cleanup function is called
[2025-12-14 05:52:26] 2025-12-14 04:47:57,503 | INFO     | --- collectZombieJob: --- 10, [1429013]
[2025-12-14 05:52:26] 2025-12-14 04:47:57,504 | INFO     | zombie collector waiting for pid 1429013
[2025-12-14 05:52:26] 2025-12-14 04:47:57,504 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-14 05:52:26] 2025-12-14 04:47:57,504 | INFO     | collected zombie processes
[2025-12-14 05:52:26] 2025-12-14 04:47:57,504 | INFO     | will attempt to kill all subprocesses of pid=1429013
[2025-12-14 05:52:26] 2025-12-14 04:47:58,308 | INFO     | process IDs to be killed: [1429013] (in reverse order)
[2025-12-14 05:52:26] 2025-12-14 04:47:58,599 | WARNING  | found no corresponding commands to process id(s)
[2025-12-14 05:52:26] 2025-12-14 04:47:58,600 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-14 05:52:26] 2025-12-14 04:47:58,633 | INFO     | did not find any defunct processes belonging to 1429013
[2025-12-14 05:52:26] 2025-12-14 04:47:58,662 | INFO     | did not find any defunct processes belonging to 1429013
[2025-12-14 05:52:26] 2025-12-14 04:47:58,663 | INFO     | ready for new job
[2025-12-14 05:52:26] 2025-12-14 04:47:58,663 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-14 05:52:26] 2025-12-14 04:47:58,666 | INFO     | ***************************************
[2025-12-14 05:52:26] 2025-12-14 04:47:58,666 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-14 05:52:26] 2025-12-14 04:47:58,666 | INFO     | ***************************************
[2025-12-14 05:52:26] 2025-12-14 04:47:58,666 | INFO     | 
[2025-12-14 05:52:26] 2025-12-14 04:47:58,675 | INFO     | architecture information:
[2025-12-14 05:52:26] 2025-12-14 04:47:58,676 | INFO     | executing command: cat /etc/os-release
[2025-12-14 05:52:26] 2025-12-14 04:47:58,699 | INFO     | cat /etc/os-release:
[2025-12-14 05:52:26] NAME="CentOS Linux"
[2025-12-14 05:52:26] VERSION="7 (Core)"
[2025-12-14 05:52:26] ID="centos"
[2025-12-14 05:52:26] ID_LIKE="rhel fedora"
[2025-12-14 05:52:26] VERSION_ID="7"
[2025-12-14 05:52:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-14 05:52:26] ANSI_COLOR="0;31"
[2025-12-14 05:52:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-14 05:52:26] HOME_URL="https://www.centos.org/"
[2025-12-14 05:52:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-14 05:52:26] 
[2025-12-14 05:52:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-14 05:52:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-14 05:52:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-14 05:52:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-14 05:52:26] 
[2025-12-14 05:52:26] 2025-12-14 04:47:58,700 | INFO     | ***************************************
[2025-12-14 05:52:26] 2025-12-14 04:47:59,203 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-12-14 05:52:26] 2025-12-14 04:47:59,227 | INFO     | sufficient remaining disk space (3243130224640 B)
[2025-12-14 05:52:26] 2025-12-14 04:47:59,228 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-14 05:52:26] 2025-12-14 04:47:59,228 | INFO     | current server update state: UPDATING_FINAL
[2025-12-14 05:52:26] 2025-12-14 04:47:59,228 | INFO     | update_server=False
[2025-12-14 05:52:26] 2025-12-14 04:47:59,228 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-14 05:52:26] 2025-12-14 04:47:59,229 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-14 05:52:26] 2025-12-14 04:47:59,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-14 05:52:26] 2025-12-14 04:47:59,239 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-14 05:52:26] 2025-12-14 04:47:59,239 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-14 05:52:26] 2025-12-14 04:47:59,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:52:26] 2025-12-14 04:47:59,239 | INFO     | will abort loop
[2025-12-14 05:52:26] 2025-12-14 04:47:59,310 | INFO     | all data control threads have been joined
[2025-12-14 05:52:26] 2025-12-14 04:47:59,438 | INFO     | all job control threads have been joined
[2025-12-14 05:52:26] 2025-12-14 04:48:00,233 | INFO     | [job] retrieve thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:00,244 | INFO     | [job] job monitor thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:00,307 | INFO     | all payload control threads have been joined
[2025-12-14 05:52:26] 2025-12-14 04:48:00,315 | INFO     | [data] control thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:00,443 | INFO     | [job] control thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:00,582 | INFO     | [job] validate thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:00,734 | INFO     | [payload] validate_post thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:01,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-14 05:52:26] 2025-12-14 04:48:01,090 | INFO     | [payload] validate_pre thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:01,235 | INFO     | [data] copytool_out thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:01,312 | INFO     | [payload] control thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:01,317 | INFO     | [payload] execute_payloads thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:01,368 | INFO     | [payload] failed_post thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:01,497 | INFO     | [data] copytool_in thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:01,590 | INFO     | [job] create_data_payload thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:02,059 | INFO     | [job] queue monitor thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:03,237 | INFO     | [data] queue_monitor thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:07,474 [wrapper] supervise_pilot (15 min periods counter: 17)
[2025-12-14 05:52:26] 2025-12-14 04:48:09,501 | INFO     | job.realtimelogging is not enabled
[2025-12-14 05:52:26] 2025-12-14 04:48:10,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-14 05:52:26] 2025-12-14 04:48:29,835 | INFO     | PID=1420939 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-14 05:52:26] 2025-12-14 04:48:29,835 | INFO     | .. there are 11 such processes running
[2025-12-14 05:52:26] 2025-12-14 04:48:29,836 | INFO     | found 0 job(s) in 20 queues
[2025-12-14 05:52:26] 2025-12-14 04:48:29,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-14 05:52:26] 2025-12-14 04:48:29,836 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-14 05:52:26] 2025-12-14 04:48:33,320 | INFO     | [monitor] cgroup control has ended
[2025-12-14 05:52:26] 2025-12-14 04:48:33,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22522171934528)>', '<ExcThread(monitor, started 22521583728384)>']
[2025-12-14 05:52:26] 2025-12-14 04:48:33,857 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-14 05:52:26] 2025-12-14 04:48:33,857 | INFO     | [monitor] control thread has ended
[2025-12-14 05:52:26] 2025-12-14 04:48:38,785 | INFO     | all workflow threads have been joined
[2025-12-14 05:52:26] 2025-12-14 04:48:38,785 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-14 05:52:26] 2025-12-14 04:48:38,785 | INFO     | traces error code: 0
[2025-12-14 05:52:26] 2025-12-14 04:48:38,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-14 05:52:26] 2025-12-14 04:48:38,937 [wrapper] ==== pilot stdout END ====
[2025-12-14 05:52:26] 2025-12-14 04:48:38,942 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-14 05:52:26] 2025-12-14 04:48:38,946 [wrapper] pilotpid: 1420939
[2025-12-14 05:52:26] 2025-12-14 04:48:38,950 [wrapper] Pilot exit status: 0
[2025-12-14 05:52:26] 2025-12-14 04:48:38,966 [wrapper] pandaids: 6926944237
[2025-12-14 05:52:26] 2025-12-14 04:48:39,156 [wrapper] cleanup supervisor_pilot 1948481 1420940
[2025-12-14 05:52:26] 2025-12-14 04:48:39,160 [wrapper] Test setup, not cleaning
[2025-12-14 05:52:26] 2025-12-14 04:48:39,165 [wrapper] apfmon messages muted
[2025-12-14 05:52:26] 2025-12-14 04:48:39,169 [wrapper] ==== wrapper stdout END ====
[2025-12-14 05:52:26] 2025-12-14 04:48:39,172 [wrapper] ==== wrapper stderr END ====
[2025-12-14 05:52:26]  *** Error codes and diagnostics ***
[2025-12-14 05:52:26]     "exeErrorCode": 0,
[2025-12-14 05:52:26]     "exeErrorDiag": "",
[2025-12-14 05:52:26]     "pilotErrorCode": 0,
[2025-12-14 05:52:26]     "pilotErrorDiag": "",
[2025-12-14 05:52:26]  *** Listing of results directory ***
[2025-12-14 05:52:26] total 505252
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc    579449 Dec 11 16:27 pilot3.tar.gz
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc      5112 Dec 11 16:45 queuedata.json
[2025-12-14 05:52:26] -rwx------ 1 boinc boinc     36322 Dec 11 16:45 runpilot2-wrapper.sh
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc       100 Dec 14 01:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-14 05:52:26] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 01:47 run_atlas
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc       105 Dec 14 01:47 job.xml
[2025-12-14 05:52:26] -rw-r--r-- 2 boinc boinc 297327521 Dec 14 01:47 EVNT.47885663._000004.pool.root.1
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc      6692 Dec 14 01:47 init_data.xml
[2025-12-14 05:52:26] -rw-r--r-- 2 boinc boinc     15847 Dec 14 01:47 start_atlas.sh
[2025-12-14 05:52:26] drwxrwx--x 2 boinc boinc      4096 Dec 14 01:47 shared
[2025-12-14 05:52:26] -rw-r--r-- 2 boinc boinc    592418 Dec 14 01:47 input.tar.gz
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc         0 Dec 14 01:47 boinc_lockfile
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc      2617 Dec 14 01:47 pandaJob.out
[2025-12-14 05:52:26] -rw------- 1 boinc boinc    991736 Dec 14 01:48 agis_schedconf.cvmfs.json
[2025-12-14 05:52:26] drwx------ 5 boinc boinc      4096 Dec 14 01:48 pilot3
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc       528 Dec 14 05:47 boinc_task_state.xml
[2025-12-14 05:52:26] -rw------- 1 boinc boinc 211396467 Dec 14 05:47 HITS.47885665._000082.pool.root.1
[2025-12-14 05:52:26] -rw------- 1 boinc boinc      1028 Dec 14 05:47 memory_monitor_summary.json
[2025-12-14 05:52:26] -rw------- 1 boinc boinc   1516240 Dec 14 05:47 agis_ddmendpoints.agis.ALL.json
[2025-12-14 05:52:26] -rw------- 1 boinc boinc    393855 Dec 14 05:47 log.47885665._000082.job.log.tgz.1
[2025-12-14 05:52:26] -rw------- 1 boinc boinc      7792 Dec 14 05:47 heartbeat.json
[2025-12-14 05:52:26] -rw------- 1 boinc boinc        95 Dec 14 05:48 pilot_heartbeat.json
[2025-12-14 05:52:26] -rw------- 1 boinc boinc      5094 Dec 14 05:48 pilotlog.txt
[2025-12-14 05:52:26] -rw------- 1 boinc boinc   1971166 Dec 14 05:48 log.47885665._000082.job.log.1
[2025-12-14 05:52:26] -rw------- 1 boinc boinc       357 Dec 14 05:48 output.list
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc       620 Dec 14 05:48 runtime_log
[2025-12-14 05:52:26] -rw------- 1 boinc boinc   2385920 Dec 14 05:48 result.tar.gz
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc      9223 Dec 14 05:48 runtime_log.err
[2025-12-14 05:52:26] -rw------- 1 boinc boinc       666 Dec 14 05:48 DRCMDmd2xn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV3QKDmdvtoSn.diag
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc        26 Dec 14 05:52 wrapper_checkpoint.txt
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc      8192 Dec 14 05:52 boinc_mmap_file
[2025-12-14 05:52:26] -rw-r--r-- 1 boinc boinc     20818 Dec 14 05:52 stderr.txt
[2025-12-14 05:52:26] HITS file was successfully produced:
[2025-12-14 05:52:26] -rw------- 1 boinc boinc 211396467 Dec 14 05:47 shared/HITS.pool.root.1
[2025-12-14 05:52:26]  *** Contents of shared directory: ***
[2025-12-14 05:52:26] total 499740
[2025-12-14 05:52:26] -rw-r--r-- 2 boinc boinc 297327521 Dec 14 01:47 ATLAS.root_0
[2025-12-14 05:52:26] -rw-r--r-- 2 boinc boinc     15847 Dec 14 01:47 start_atlas.sh
[2025-12-14 05:52:26] -rw-r--r-- 2 boinc boinc    592418 Dec 14 01:47 input.tar.gz
[2025-12-14 05:52:26] -rw------- 1 boinc boinc 211396467 Dec 14 05:47 HITS.pool.root.1
[2025-12-14 05:52:26] -rw------- 1 boinc boinc   2385920 Dec 14 05:48 result.tar.gz
05:52:27 (1416841): run_atlas exited; CPU time 56860.048459
05:52:27 (1416841): called boinc_finish(0)

</stderr_txt>
]]>

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