Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:49:43 (1395136): wrapper (7.7.26015): starting
02:49:43 (1395136): wrapper: running run_atlas (--nthreads 4)
[2025-12-12 02:49:43] Arguments: --nthreads 4
[2025-12-12 02:49:43] Threads: 4
[2025-12-12 02:49:43] Checking for CVMFS
[2025-12-12 02:49:43] No cvmfs_config command found, will try listing directly
[2025-12-12 02:49:43] CVMFS is ok
[2025-12-12 02:49:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 02:49:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-12 02:49:43] Further information can be found at the LHC@home message board.
[2025-12-12 02:49:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 02:49:43] Checking for apptainer binary...
[2025-12-12 02:49:43] which: no apptainer in ((null))
[2025-12-12 02:49:43] apptainer is not installed, using version from CVMFS
[2025-12-12 02:49:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 02:49:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-12-12 02:49:43] apptainer works
[2025-12-12 02:49:43] Set ATHENA_PROC_NUMBER=4
[2025-12-12 02:49:43] Set ATHENA_CORE_NUMBER=4
[2025-12-12 02:49:43] Starting ATLAS job with PandaID=6926944291
[2025-12-12 02:49:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 06:17:41]  *** The last 200 lines of the pilot log: ***
[2025-12-12 06:17:41] 2025-12-12 05:13:32,482 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-12 06:17:41] 2025-12-12 05:13:32,542 | INFO     | time since job start (12214s) is within the limit (174528.0s)
[2025-12-12 06:17:41] 2025-12-12 05:13:34,545 | INFO     | time since job start (12216s) is within the limit (174528.0s)
[2025-12-12 06:17:41] 2025-12-12 05:13:34,844 | INFO     | monitor loop #838: job 0:6926944291 is in state 'finished'
[2025-12-12 06:17:41] 2025-12-12 05:13:34,844 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 06:17:41] 2025-12-12 05:13:36,551 | INFO     | time since job start (12218s) is within the limit (174528.0s)
[2025-12-12 06:17:41] 2025-12-12 05:13:37,348 | INFO     | monitor loop #839: job 0:6926944291 is in state 'finished'
[2025-12-12 06:17:41] 2025-12-12 05:13:37,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,556 | INFO     | time since job start (12220s) is within the limit (174528.0s)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,713 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-12 06:17:41] 2025-12-12 05:13:38,730 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2730.2713828124993
[2025-12-12 06:17:41] 2025-12-12 05:13:38,748 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6926944291/memory_monitor_summary.json (trf name=prmon)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,748 | INFO     | extracted standard info from prmon json
[2025-12-12 06:17:41] 2025-12-12 05:13:38,748 | INFO     | extracted standard memory fields from prmon json
[2025-12-12 06:17:41] 2025-12-12 05:13:38,748 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-12 06:17:41] 2025-12-12 05:13:38,749 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-12 06:17:41] 2025-12-12 05:13:38,749 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-12 06:17:41] 2025-12-12 05:13:38,751 | INFO     | fitting pss+swap vs Time
[2025-12-12 06:17:41] 2025-12-12 05:13:38,752 | INFO     | sum of square deviations: 2480604650.0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,752 | INFO     | sum of deviations: -18651566484.999996
[2025-12-12 06:17:41] 2025-12-12 05:13:38,752 | INFO     | mean x: 1765510301.5
[2025-12-12 06:17:41] 2025-12-12 05:13:38,752 | INFO     | mean y: 2419372.4
[2025-12-12 06:17:41] 2025-12-12 05:13:38,753 | INFO     | intersect: 13277220243.381048
[2025-12-12 06:17:41] 2025-12-12 05:13:38,753 | INFO     | chi2: 1.5175116699973306
[2025-12-12 06:17:41] 2025-12-12 05:13:38,753 | INFO     | sum of square deviations: 2299168690.0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,754 | INFO     | sum of deviations: -18034214154.999996
[2025-12-12 06:17:41] 2025-12-12 05:13:38,754 | INFO     | mean x: 1765510149.0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,754 | INFO     | mean y: 2419891.405128205
[2025-12-12 06:17:41] 2025-12-12 05:13:38,754 | INFO     | intersect: 13850724393.103937
[2025-12-12 06:17:41] 2025-12-12 05:13:38,754 | INFO     | chi2: 1.515457413217117
[2025-12-12 06:17:41] 2025-12-12 05:13:38,754 | INFO     | current chi2=1.515457413217117 (change=0.1353700812209998 %)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,754 | INFO     | right removable region: 194
[2025-12-12 06:17:41] 2025-12-12 05:13:38,754 | INFO     | sum of square deviations: 2299168690.0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,755 | INFO     | sum of deviations: -37994120535.00001
[2025-12-12 06:17:41] 2025-12-12 05:13:38,755 | INFO     | mean x: 1765510454.0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,755 | INFO     | mean y: 2435310.3076923075
[2025-12-12 06:17:41] 2025-12-12 05:13:38,755 | INFO     | intersect: 29177770415.918663
[2025-12-12 06:17:41] 2025-12-12 05:13:38,756 | INFO     | chi2: 0.30119529369818154
[2025-12-12 06:17:41] 2025-12-12 05:13:38,756 | INFO     | current chi2=0.30119529369818154 (change=80.15202784577524 %)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,756 | INFO     | sum of square deviations: 2126802667.5
[2025-12-12 06:17:41] 2025-12-12 05:13:38,757 | INFO     | sum of deviations: -29281744904.999996
[2025-12-12 06:17:41] 2025-12-12 05:13:38,757 | INFO     | mean x: 1765510606.5
[2025-12-12 06:17:41] 2025-12-12 05:13:38,757 | INFO     | mean y: 2427582.147368421
[2025-12-12 06:17:41] 2025-12-12 05:13:38,757 | INFO     | intersect: 24309915999.6664
[2025-12-12 06:17:41] 2025-12-12 05:13:38,757 | INFO     | chi2: 0.26659342689830473
[2025-12-12 06:17:41] 2025-12-12 05:13:38,757 | INFO     | current chi2=0.26659342689830473 (change=11.488183090453688 %)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,757 | INFO     | left removable region: 20
[2025-12-12 06:17:41] 2025-12-12 05:13:38,757 | INFO     | sum of square deviations: 1633472487.5
[2025-12-12 06:17:41] 2025-12-12 05:13:38,758 | INFO     | sum of deviations: -8072771049.0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,758 | INFO     | mean x: 1765510728.5
[2025-12-12 06:17:41] 2025-12-12 05:13:38,758 | INFO     | mean y: 2407787.7126436783
[2025-12-12 06:17:41] 2025-12-12 05:13:38,758 | INFO     | intersect: 8727723949.93769
[2025-12-12 06:17:41] 2025-12-12 05:13:38,758 | INFO     | chi2: 0.10731464331071618
[2025-12-12 06:17:41] 2025-12-12 05:13:38,758 | INFO     | current memory leak: -4.94 B/s (using 174 data points, chi2=0.11)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | could have reported an average CPU frequency of 2720 MHz (10 samples)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | ..............................
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | . Timing measurements:
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | . get job = 0 s
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | . initial setup = 1 s
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | . payload setup = 9 s
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | . stage-in = 0 s
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | . payload execution = 12180 s
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | . stage-out = 0 s
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | . log creation = 0 s
[2025-12-12 06:17:41] 2025-12-12 05:13:38,759 | INFO     | ..............................
[2025-12-12 06:17:41] 2025-12-12 05:13:38,824 | INFO     | 
[2025-12-12 06:17:41] 2025-12-12 05:13:38,824 | INFO     | job summary report
[2025-12-12 06:17:41] 2025-12-12 05:13:38,824 | INFO     | --------------------------------------------------
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | PanDA job id: 6926944291
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | task id: 47885665
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | errors: (none)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | pilot state: finished 
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | transexitcode: 0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | exeerrorcode: 0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | exeerrordiag: 
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | exitcode: 0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,825 | INFO     | exitmsg: OK
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | cpuconsumptiontime: 47305 s
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | nevents: 400
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | neventsw: 0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | pid: 1407565
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | pgrp: 1407565
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | corecount: 4
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | event service: False
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | sizes: {0: 2284097, 1: 2284097, 7: 2284387, 11: 2284415, 12193: 2314610, 12195: 2323632, 12196: 2323816, 12202: 2324010}
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | --------------------------------------------------
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | 
[2025-12-12 06:17:41] 2025-12-12 05:13:38,826 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-12-12 06:17:41] 2025-12-12 05:13:38,854 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,854 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,855 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,856 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,856 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,856 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,856 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 06:17:41] 2025-12-12 05:13:38,856 | INFO     | job 6926944291 has completed (purged errors)
[2025-12-12 06:17:41] 2025-12-12 05:13:38,856 | INFO     | overall cleanup function is called
[2025-12-12 06:17:41] 2025-12-12 05:13:39,865 | INFO     | --- collectZombieJob: --- 10, [1407565]
[2025-12-12 06:17:41] 2025-12-12 05:13:39,865 | INFO     | zombie collector waiting for pid 1407565
[2025-12-12 06:17:41] 2025-12-12 05:13:39,865 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 06:17:41] 2025-12-12 05:13:39,865 | INFO     | collected zombie processes
[2025-12-12 06:17:41] 2025-12-12 05:13:39,865 | INFO     | will attempt to kill all subprocesses of pid=1407565
[2025-12-12 06:17:41] 2025-12-12 05:13:40,498 | INFO     | process IDs to be killed: [1407565] (in reverse order)
[2025-12-12 06:17:41] 2025-12-12 05:13:40,744 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 06:17:41] 2025-12-12 05:13:40,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 06:17:41] 2025-12-12 05:13:40,778 | INFO     | did not find any defunct processes belonging to 1407565
[2025-12-12 06:17:41] 2025-12-12 05:13:40,808 | INFO     | did not find any defunct processes belonging to 1407565
[2025-12-12 06:17:41] 2025-12-12 05:13:40,808 | INFO     | ready for new job
[2025-12-12 06:17:41] 2025-12-12 05:13:40,809 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 06:17:41] 2025-12-12 05:13:40,811 | INFO     | ***************************************
[2025-12-12 06:17:41] 2025-12-12 05:13:40,811 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 06:17:41] 2025-12-12 05:13:40,811 | INFO     | ***************************************
[2025-12-12 06:17:41] 2025-12-12 05:13:40,811 | INFO     | 
[2025-12-12 06:17:41] 2025-12-12 05:13:40,819 | INFO     | architecture information:
[2025-12-12 06:17:41] 2025-12-12 05:13:40,820 | INFO     | executing command: cat /etc/os-release
[2025-12-12 06:17:41] 2025-12-12 05:13:40,843 | INFO     | cat /etc/os-release:
[2025-12-12 06:17:41] NAME="CentOS Linux"
[2025-12-12 06:17:41] VERSION="7 (Core)"
[2025-12-12 06:17:41] ID="centos"
[2025-12-12 06:17:41] ID_LIKE="rhel fedora"
[2025-12-12 06:17:41] VERSION_ID="7"
[2025-12-12 06:17:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 06:17:41] ANSI_COLOR="0;31"
[2025-12-12 06:17:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 06:17:41] HOME_URL="https://www.centos.org/"
[2025-12-12 06:17:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 06:17:41] 
[2025-12-12 06:17:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 06:17:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 06:17:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 06:17:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 06:17:41] 
[2025-12-12 06:17:41] 2025-12-12 05:13:40,843 | INFO     | ***************************************
[2025-12-12 06:17:41] 2025-12-12 05:13:41,346 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-12-12 06:17:41] 2025-12-12 05:13:41,366 | INFO     | sufficient remaining disk space (3201741881344 B)
[2025-12-12 06:17:41] 2025-12-12 05:13:41,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 06:17:41] 2025-12-12 05:13:41,367 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 06:17:41] 2025-12-12 05:13:41,367 | INFO     | update_server=False
[2025-12-12 06:17:41] 2025-12-12 05:13:41,367 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 06:17:41] 2025-12-12 05:13:41,367 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 06:17:41] 2025-12-12 05:13:41,368 | INFO     | aborting loop
[2025-12-12 06:17:41] 2025-12-12 05:13:41,989 | INFO     | all job control threads have been joined
[2025-12-12 06:17:41] 2025-12-12 05:13:42,031 | INFO     | all payload control threads have been joined
[2025-12-12 06:17:41] 2025-12-12 05:13:42,373 | INFO     | [job] retrieve thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:42,373 | INFO     | [job] job monitor thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:42,461 | INFO     | all data control threads have been joined
[2025-12-12 06:17:41] 2025-12-12 05:13:42,574 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:42,624 | INFO     | [data] copytool_in thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:42,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 06:17:41] 2025-12-12 05:13:42,875 | INFO     | [job] validate thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:42,884 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 06:17:41] 2025-12-12 05:13:42,995 | INFO     | [job] control thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:43,037 | INFO     | [payload] control thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:43,303 | INFO     | [payload] failed_post thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:43,386 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:43,466 | INFO     | [data] control thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:43,480 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:43,598 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:43,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 06:17:41] 2025-12-12 05:13:43,939 | INFO     | [payload] validate_post thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:44,812 | INFO     | [data] copytool_out thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:44,841 | INFO     | [job] queue monitor thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:13:46,890 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 06:17:41] 2025-12-12 05:14:12,408 | INFO     | PID=1399461 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-12 06:17:41] 2025-12-12 05:14:12,408 | INFO     | .. there are 3 such processes running
[2025-12-12 06:17:41] 2025-12-12 05:14:12,409 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 06:17:41] 2025-12-12 05:14:12,409 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 06:17:41] 2025-12-12 05:14:12,409 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 06:17:41] 2025-12-12 05:14:17,211 | INFO     | [monitor] cgroup control has ended
[2025-12-12 06:17:41] 2025-12-12 05:14:18,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23106989627200)>', '<ExcThread(monitor, started 23106741548800)>']
[2025-12-12 06:17:41] 2025-12-12 05:14:19,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 06:17:41] 2025-12-12 05:14:19,442 | INFO     | [monitor] control thread has ended
[2025-12-12 06:17:41] 2025-12-12 05:14:23,481 | INFO     | all workflow threads have been joined
[2025-12-12 06:17:41] 2025-12-12 05:14:23,483 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 06:17:41] 2025-12-12 05:14:23,483 | INFO     | traces error code: 0
[2025-12-12 06:17:41] 2025-12-12 05:14:23,484 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 06:17:41] 2025-12-12 05:14:23,640 [wrapper] ==== pilot stdout END ====
[2025-12-12 06:17:41] 2025-12-12 05:14:23,644 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 06:17:41] 2025-12-12 05:14:23,647 [wrapper] pilotpid: 1399461
[2025-12-12 06:17:41] 2025-12-12 05:14:23,651 [wrapper] Pilot exit status: 0
[2025-12-12 06:17:41] 2025-12-12 05:14:23,666 [wrapper] pandaids: 6926944291
[2025-12-12 06:17:41] 2025-12-12 05:14:23,849 [wrapper] cleanup supervisor_pilot 1600499 1399462
[2025-12-12 06:17:41] 2025-12-12 05:14:23,853 [wrapper] Test setup, not cleaning
[2025-12-12 06:17:41] 2025-12-12 05:14:23,857 [wrapper] apfmon messages muted
[2025-12-12 06:17:41] 2025-12-12 05:14:23,861 [wrapper] ==== wrapper stdout END ====
[2025-12-12 06:17:41] 2025-12-12 05:14:23,864 [wrapper] ==== wrapper stderr END ====
[2025-12-12 06:17:41]  *** Error codes and diagnostics ***
[2025-12-12 06:17:41]     "exeErrorCode": 0,
[2025-12-12 06:17:41]     "exeErrorDiag": "",
[2025-12-12 06:17:41]     "pilotErrorCode": 0,
[2025-12-12 06:17:41]     "pilotErrorDiag": "",
[2025-12-12 06:17:41]  *** Listing of results directory ***
[2025-12-12 06:17:41] total 502520
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc    579449 Dec 11 16:27 pilot3.tar.gz
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc      5112 Dec 11 16:45 queuedata.json
[2025-12-12 06:17:41] -rwx------ 1 boinc boinc     36322 Dec 11 16:45 runpilot2-wrapper.sh
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc       100 Dec 12 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 06:17:41] -rwxr-xr-x 1 boinc boinc      7986 Dec 12 02:49 run_atlas
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc       105 Dec 12 02:49 job.xml
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc      6691 Dec 12 02:49 init_data.xml
[2025-12-12 06:17:41] -rw-r--r-- 2 boinc boinc 292962249 Dec 12 02:49 EVNT.47885663._000006.pool.root.1
[2025-12-12 06:17:41] -rw-r--r-- 2 boinc boinc     15847 Dec 12 02:49 start_atlas.sh
[2025-12-12 06:17:41] drwxrwx--x 2 boinc boinc      4096 Dec 12 02:49 shared
[2025-12-12 06:17:41] -rw-r--r-- 2 boinc boinc    592419 Dec 12 02:49 input.tar.gz
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc         0 Dec 12 02:49 boinc_lockfile
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc      2619 Dec 12 02:49 pandaJob.out
[2025-12-12 06:17:41] -rw------- 1 boinc boinc    990085 Dec 12 02:49 agis_schedconf.cvmfs.json
[2025-12-12 06:17:41] drwx------ 5 boinc boinc      4096 Dec 12 02:49 pilot3
[2025-12-12 06:17:41] -rw------- 1 boinc boinc 213566322 Dec 12 06:12 HITS.47885665._000136.pool.root.1
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc       528 Dec 12 06:12 boinc_task_state.xml
[2025-12-12 06:17:41] -rw------- 1 boinc boinc      1028 Dec 12 06:13 memory_monitor_summary.json
[2025-12-12 06:17:41] -rw------- 1 boinc boinc   1516240 Dec 12 06:13 agis_ddmendpoints.agis.ALL.json
[2025-12-12 06:17:41] -rw------- 1 boinc boinc    372149 Dec 12 06:13 log.47885665._000136.job.log.tgz.1
[2025-12-12 06:17:41] -rw------- 1 boinc boinc      7777 Dec 12 06:13 heartbeat.json
[2025-12-12 06:17:41] -rw------- 1 boinc boinc        95 Dec 12 06:14 pilot_heartbeat.json
[2025-12-12 06:17:41] -rw------- 1 boinc boinc      4835 Dec 12 06:14 pilotlog.txt
[2025-12-12 06:17:41] -rw------- 1 boinc boinc   1695792 Dec 12 06:14 log.47885665._000136.job.log.1
[2025-12-12 06:17:41] -rw------- 1 boinc boinc       357 Dec 12 06:14 output.list
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc       620 Dec 12 06:14 runtime_log
[2025-12-12 06:17:41] -rw------- 1 boinc boinc   2088960 Dec 12 06:14 result.tar.gz
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc      9223 Dec 12 06:14 runtime_log.err
[2025-12-12 06:17:41] -rw------- 1 boinc boinc       667 Dec 12 06:14 ExqLDml2xn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRMNKDmuudqam.diag
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc        27 Dec 12 06:17 wrapper_checkpoint.txt
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc      8192 Dec 12 06:17 boinc_mmap_file
[2025-12-12 06:17:41] -rw-r--r-- 1 boinc boinc     21223 Dec 12 06:17 stderr.txt
[2025-12-12 06:17:41] HITS file was successfully produced:
[2025-12-12 06:17:41] -rw------- 1 boinc boinc 213566322 Dec 12 06:12 shared/HITS.pool.root.1
[2025-12-12 06:17:41]  *** Contents of shared directory: ***
[2025-12-12 06:17:41] total 497304
[2025-12-12 06:17:41] -rw-r--r-- 2 boinc boinc 292962249 Dec 12 02:49 ATLAS.root_0
[2025-12-12 06:17:41] -rw-r--r-- 2 boinc boinc     15847 Dec 12 02:49 start_atlas.sh
[2025-12-12 06:17:41] -rw-r--r-- 2 boinc boinc    592419 Dec 12 02:49 input.tar.gz
[2025-12-12 06:17:41] -rw------- 1 boinc boinc 213566322 Dec 12 06:12 HITS.pool.root.1
[2025-12-12 06:17:41] -rw------- 1 boinc boinc   2088960 Dec 12 06:14 result.tar.gz
06:17:42 (1395136): run_atlas exited; CPU time 48179.327811
06:17:42 (1395136): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN