Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:08:22 (30637): wrapper (7.7.26015): starting
16:08:22 (30637): wrapper: running run_atlas (--nthreads 8)
[2025-12-11 16:08:22] Arguments: --nthreads 8
[2025-12-11 16:08:22] Threads: 8
[2025-12-11 16:08:22] Checking for CVMFS
[2025-12-11 16:08:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-11 16:08:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-11 16:08:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-11 16:08:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-11 16:08:26] 2.11.2.0 7372 306968 200840 153888 0 213 22602208 25165824 3522 130560 28 148658362 99.873 89011737 2834 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-11 16:08:26] CVMFS is ok
[2025-12-11 16:08:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-11 16:08:26] Checking for apptainer binary...
[2025-12-11 16:08:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-11 16:08:26] Running /usr/bin/apptainer --version
[2025-12-11 16:08:26] apptainer version 1.3.2-1.el7
[2025-12-11 16:08:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-11 16:08:43] cg-vwn297.simple-grid.lan
[2025-12-11 16:08:43] apptainer works
[2025-12-11 16:08:43] Set ATHENA_PROC_NUMBER=8
[2025-12-11 16:08:43] Set ATHENA_CORE_NUMBER=8
[2025-12-11 16:08:43] Starting ATLAS job with PandaID=6926916357
[2025-12-11 16:08:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 07:36:53]  *** The last 200 lines of the pilot log: ***
[2025-12-12 07:36:53] 2025-12-12 06:35:50,465 | INFO     | time since job start (55423s) is within the limit (174528.0s)
[2025-12-12 07:36:53] 2025-12-12 06:35:50,465 | INFO     | 55428s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-12 07:36:53] 2025-12-12 06:35:50,735 | INFO     | monitor loop #3845: job 0:6926916357 is in state 'finished'
[2025-12-12 07:36:53] 2025-12-12 06:35:50,736 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 07:36:53] 2025-12-12 06:35:52,472 | INFO     | time since job start (55425s) is within the limit (174528.0s)
[2025-12-12 07:36:53] 2025-12-12 06:35:53,240 | INFO     | monitor loop #3846: job 0:6926916357 is in state 'finished'
[2025-12-12 07:36:53] 2025-12-12 06:35:53,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 07:36:53] 2025-12-12 06:35:54,485 | INFO     | time since job start (55427s) is within the limit (174528.0s)
[2025-12-12 07:36:53] 2025-12-12 06:35:55,747 | INFO     | monitor loop #3847: job 0:6926916357 is in state 'finished'
[2025-12-12 07:36:53] 2025-12-12 06:35:55,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 07:36:53] 2025-12-12 06:35:56,493 | INFO     | time since job start (55429s) is within the limit (174528.0s)
[2025-12-12 07:36:53] 2025-12-12 06:35:58,254 | INFO     | monitor loop #3848: job 0:6926916357 is in state 'finished'
[2025-12-12 07:36:53] 2025-12-12 06:35:58,255 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 07:36:53] 2025-12-12 06:35:58,498 | INFO     | time since job start (55431s) is within the limit (174528.0s)
[2025-12-12 07:36:53] 2025-12-12 06:35:59,694 | INFO     | PID=2335 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-12 07:36:53] 2025-12-12 06:35:59,694 | INFO     | .. there are 9 such processes running
[2025-12-12 07:36:53] 2025-12-12 06:36:00,499 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-12 07:36:53] 2025-12-12 06:36:00,501 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-12-12 07:36:53] 2025-12-12 06:36:00,512 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6926916357/memory_monitor_summary.json (trf name=prmon)
[2025-12-12 07:36:53] 2025-12-12 06:36:00,513 | INFO     | extracted standard info from prmon json
[2025-12-12 07:36:53] 2025-12-12 06:36:00,513 | INFO     | extracted standard memory fields from prmon json
[2025-12-12 07:36:53] 2025-12-12 06:36:00,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-12 07:36:53] 2025-12-12 06:36:00,539 | INFO     | fitting pss+swap vs Time
[2025-12-12 07:36:53] 2025-12-12 06:36:00,541 | INFO     | sum of square deviations: 223797211757.47293
[2025-12-12 07:36:53] 2025-12-12 06:36:00,584 | INFO     | sum of deviations: 1272277368262.5996
[2025-12-12 07:36:53] 2025-12-12 06:36:00,585 | INFO     | mean x: 1765493893.8818283
[2025-12-12 07:36:53] 2025-12-12 06:36:00,585 | INFO     | mean y: 3240987.9018952064
[2025-12-12 07:36:53] 2025-12-12 06:36:00,585 | INFO     | intersect: -10033514641.68051
[2025-12-12 07:36:53] 2025-12-12 06:36:00,586 | INFO     | chi2: 19.53351847393542
[2025-12-12 07:36:53] 2025-12-12 06:36:00,588 | INFO     | sum of square deviations: 220075839043.56436
[2025-12-12 07:36:53] 2025-12-12 06:36:00,614 | INFO     | sum of deviations: 1632011103470.149
[2025-12-12 07:36:53] 2025-12-12 06:36:00,615 | INFO     | mean x: 1765493741.3867712
[2025-12-12 07:36:53] 2025-12-12 06:36:00,615 | INFO     | mean y: 3255732.961883408
[2025-12-12 07:36:53] 2025-12-12 06:36:00,615 | INFO     | intersect: -13089073718.431948
[2025-12-12 07:36:53] 2025-12-12 06:36:00,616 | INFO     | chi2: 15.944741841480838
[2025-12-12 07:36:53] 2025-12-12 06:36:00,616 | INFO     | current chi2=15.944741841480838 (change=18.372402479580273 %)
[2025-12-12 07:36:53] 2025-12-12 06:36:00,616 | INFO     | right removable region: 891
[2025-12-12 07:36:53] 2025-12-12 06:36:00,618 | INFO     | sum of square deviations: 220075356533.56424
[2025-12-12 07:36:53] 2025-12-12 06:36:00,648 | INFO     | sum of deviations: 835757664829.246
[2025-12-12 07:36:53] 2025-12-12 06:36:00,648 | INFO     | mean x: 1765494046.3867712
[2025-12-12 07:36:53] 2025-12-12 06:36:00,649 | INFO     | mean y: 3258873.5123318387
[2025-12-12 07:36:53] 2025-12-12 06:36:00,649 | INFO     | intersect: -6701377232.58939
[2025-12-12 07:36:53] 2025-12-12 06:36:00,650 | INFO     | chi2: 14.6539656703934
[2025-12-12 07:36:53] 2025-12-12 06:36:00,650 | INFO     | current chi2=14.6539656703934 (change=24.980408982913435 %)
[2025-12-12 07:36:53] 2025-12-12 06:36:00,650 | INFO     | left removable region: 10
[2025-12-12 07:36:53] 2025-12-12 06:36:00,651 | INFO     | sum of square deviations: 212033568412.80594
[2025-12-12 07:36:53] 2025-12-12 06:36:00,688 | INFO     | sum of deviations: 917092712760.7487
[2025-12-12 07:36:53] 2025-12-12 06:36:00,688 | INFO     | mean x: 1765494015.8978434
[2025-12-12 07:36:53] 2025-12-12 06:36:00,689 | INFO     | mean y: 3292638.1305334847
[2025-12-12 07:36:53] 2025-12-12 06:36:00,689 | INFO     | intersect: -7632864733.188948
[2025-12-12 07:36:53] 2025-12-12 06:36:00,690 | INFO     | chi2: 6.725547634421551
[2025-12-12 07:36:53] 2025-12-12 06:36:00,690 | INFO     | current memory leak: 4.33 B/s (using 881 data points, chi2=6.73)
[2025-12-12 07:36:53] 2025-12-12 06:36:00,691 | INFO     | could have reported an average CPU frequency of 1999 MHz (32 samples)
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | ..............................
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | . Timing measurements:
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | . get job = 0 s
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | . initial setup = 4 s
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | . payload setup = 303 s
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | . stage-in = 0 s
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | . payload execution = 54858 s
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | . stage-out = 5 s
[2025-12-12 07:36:53] 2025-12-12 06:36:00,692 | INFO     | . log creation = 2 s
[2025-12-12 07:36:53] 2025-12-12 06:36:00,693 | INFO     | ..............................
[2025-12-12 07:36:53] 2025-12-12 06:36:00,718 | INFO     | time since job start (55433s) is within the limit (174528.0s)
[2025-12-12 07:36:53] 2025-12-12 06:36:01,277 | INFO     | 
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | job summary report
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | --------------------------------------------------
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | PanDA job id: 6926916357
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | task id: 47866640
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | errors: (none)
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | pilot state: finished 
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | transexitcode: 0
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | exeerrorcode: 0
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | exeerrordiag: 
[2025-12-12 07:36:53] 2025-12-12 06:36:01,278 | INFO     | exitcode: 0
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | exitmsg: OK
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | cpuconsumptiontime: 201778 s
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | nevents: 1000
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | neventsw: 0
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | pid: 9655
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | pgrp: 9655
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | corecount: 8
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | event service: False
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | sizes: {0: 2284458, 1: 2284657, 12: 2284657, 23: 2284685, 33: 2284713, 44: 2284769, 55: 2284925, 66: 2284953, 76: 2284981, 86: 2285299, 87: 2285327, 55165: 2353180
[2025-12-12 07:36:53] 2025-12-12 06:36:01,279 | INFO     | --------------------------------------------------
[2025-12-12 07:36:53] 2025-12-12 06:36:01,280 | INFO     | 
[2025-12-12 07:36:53] 2025-12-12 06:36:01,280 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-12-12 07:36:53] 2025-12-12 06:36:01,359 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,359 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,359 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,359 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,359 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,359 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,360 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,361 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,361 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 07:36:53] 2025-12-12 06:36:01,361 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,361 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 07:36:53] 2025-12-12 06:36:01,361 | INFO     | job 6926916357 has completed (purged errors)
[2025-12-12 07:36:53] 2025-12-12 06:36:01,361 | INFO     | overall cleanup function is called
[2025-12-12 07:36:53] 2025-12-12 06:36:02,383 | INFO     | --- collectZombieJob: --- 10, [9655]
[2025-12-12 07:36:53] 2025-12-12 06:36:02,383 | INFO     | zombie collector waiting for pid 9655
[2025-12-12 07:36:53] 2025-12-12 06:36:02,384 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 07:36:53] 2025-12-12 06:36:02,384 | INFO     | collected zombie processes
[2025-12-12 07:36:53] 2025-12-12 06:36:02,384 | INFO     | will attempt to kill all subprocesses of pid=9655
[2025-12-12 07:36:53] 2025-12-12 06:36:02,491 | INFO     | process IDs to be killed: [9655] (in reverse order)
[2025-12-12 07:36:53] 2025-12-12 06:36:03,010 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 07:36:53] 2025-12-12 06:36:03,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 07:36:53] 2025-12-12 06:36:03,013 | INFO     | did not find any defunct processes belonging to 9655
[2025-12-12 07:36:53] 2025-12-12 06:36:03,023 | INFO     | did not find any defunct processes belonging to 9655
[2025-12-12 07:36:53] 2025-12-12 06:36:03,023 | INFO     | ready for new job
[2025-12-12 07:36:53] 2025-12-12 06:36:03,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 07:36:53] 2025-12-12 06:36:03,028 | INFO     | ***************************************
[2025-12-12 07:36:53] 2025-12-12 06:36:03,028 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 07:36:53] 2025-12-12 06:36:03,028 | INFO     | ***************************************
[2025-12-12 07:36:53] 2025-12-12 06:36:03,028 | INFO     | 
[2025-12-12 07:36:53] 2025-12-12 06:36:03,033 | INFO     | pilot is running in a VM
[2025-12-12 07:36:53] 2025-12-12 06:36:03,033 | INFO     | architecture information:
[2025-12-12 07:36:53] 2025-12-12 06:36:03,041 | INFO     | executing command: cat /etc/os-release
[2025-12-12 07:36:53] 2025-12-12 06:36:03,242 | INFO     | cat /etc/os-release:
[2025-12-12 07:36:53] NAME="CentOS Linux"
[2025-12-12 07:36:53] VERSION="7 (Core)"
[2025-12-12 07:36:53] ID="centos"
[2025-12-12 07:36:53] ID_LIKE="rhel fedora"
[2025-12-12 07:36:53] VERSION_ID="7"
[2025-12-12 07:36:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 07:36:53] ANSI_COLOR="0;31"
[2025-12-12 07:36:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 07:36:53] HOME_URL="https://www.centos.org/"
[2025-12-12 07:36:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 07:36:53] 
[2025-12-12 07:36:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 07:36:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 07:36:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 07:36:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 07:36:53] 
[2025-12-12 07:36:53] 2025-12-12 06:36:03,242 | INFO     | ***************************************
[2025-12-12 07:36:53] 2025-12-12 06:36:03,744 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-12-12 07:36:53] 2025-12-12 06:36:03,926 | INFO     | sufficient remaining disk space (496005808128 B)
[2025-12-12 07:36:53] 2025-12-12 06:36:03,926 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 07:36:53] 2025-12-12 06:36:03,927 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 07:36:53] 2025-12-12 06:36:03,927 | INFO     | update_server=False
[2025-12-12 07:36:53] 2025-12-12 06:36:03,927 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 07:36:53] 2025-12-12 06:36:03,931 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 07:36:53] 2025-12-12 06:36:04,298 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 07:36:53] 2025-12-12 06:36:04,299 | INFO     | aborting loop
[2025-12-12 07:36:53] 2025-12-12 06:36:04,463 | INFO     | all payload control threads have been joined
[2025-12-12 07:36:53] 2025-12-12 06:36:04,784 | INFO     | all data control threads have been joined
[2025-12-12 07:36:53] 2025-12-12 06:36:04,859 | INFO     | all job control threads have been joined
[2025-12-12 07:36:53] 2025-12-12 06:36:04,932 | INFO     | [job] retrieve thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,029 | INFO     | [payload] validate_post thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,304 | INFO     | [job] job monitor thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,444 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,469 | INFO     | [payload] control thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,477 | INFO     | [data] copytool_in thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,710 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,790 | INFO     | [data] control thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,865 | INFO     | [job] control thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,874 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 07:36:53] 2025-12-12 06:36:05,938 | INFO     | [data] copytool_out thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:05,964 | INFO     | [job] validate thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:06,171 | INFO     | [payload] failed_post thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:06,209 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:06,521 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 07:36:53] 2025-12-12 06:36:06,880 | INFO     | [job] queue monitor thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:10,530 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 07:36:53] 2025-12-12 06:36:33,884 | INFO     | PID=2335 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-12 07:36:53] 2025-12-12 06:36:33,884 | INFO     | .. there are 9 such processes running
[2025-12-12 07:36:53] 2025-12-12 06:36:33,886 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 07:36:53] 2025-12-12 06:36:33,886 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 07:36:53] 2025-12-12 06:36:33,886 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 07:36:53] 2025-12-12 06:36:43,356 | INFO     | [monitor] cgroup control has ended
[2025-12-12 07:36:53] 2025-12-12 06:36:44,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140068590208832)>', '<ExcThread(monitor, started 140067934824192)>']
[2025-12-12 07:36:53] 2025-12-12 06:36:44,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 07:36:53] 2025-12-12 06:36:44,951 | INFO     | [monitor] control thread has ended
[2025-12-12 07:36:53] 2025-12-12 06:36:49,097 | INFO     | all workflow threads have been joined
[2025-12-12 07:36:53] 2025-12-12 06:36:49,098 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 07:36:53] 2025-12-12 06:36:49,098 | INFO     | traces error code: 0
[2025-12-12 07:36:53] 2025-12-12 06:36:49,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 07:36:53] 2025-12-12 06:36:49,522 [wrapper] ==== pilot stdout END ====
[2025-12-12 07:36:53] 2025-12-12 06:36:49,631 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 07:36:53] 2025-12-12 06:36:49,758 [wrapper] pilotpid: 2335
[2025-12-12 07:36:53] 2025-12-12 06:36:49,844 [wrapper] Pilot exit status: 0
[2025-12-12 07:36:53] 2025-12-12 06:36:50,261 [wrapper] pandaids: 6926916357
[2025-12-12 07:36:53] 2025-12-12 06:36:51,098 [wrapper] cleanup supervisor_pilot 32124 2336
[2025-12-12 07:36:53] 2025-12-12 06:36:51,214 [wrapper] Test setup, not cleaning
[2025-12-12 07:36:53] 2025-12-12 06:36:51,299 [wrapper] apfmon messages muted
[2025-12-12 07:36:53] 2025-12-12 06:36:51,418 [wrapper] ==== wrapper stdout END ====
[2025-12-12 07:36:53] 2025-12-12 06:36:51,540 [wrapper] ==== wrapper stderr END ====
[2025-12-12 07:36:53]  *** Error codes and diagnostics ***
[2025-12-12 07:36:53]     "exeErrorCode": 0,
[2025-12-12 07:36:53]     "exeErrorDiag": "",
[2025-12-12 07:36:53]     "pilotErrorCode": 0,
[2025-12-12 07:36:53]     "pilotErrorDiag": "",
[2025-12-12 07:36:53]  *** Listing of results directory ***
[2025-12-12 07:36:53] total 933580
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc    579449 Dec 11 15:35 pilot3.tar.gz
[2025-12-12 07:36:53] -rwx------. 1 boinc boinc     36292 Dec 11 15:47 runpilot2-wrapper.sh
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc      5112 Dec 11 15:47 queuedata.json
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc       100 Dec 11 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 07:36:53] -rwxr-xr-x. 1 boinc boinc      7986 Dec 11 16:08 run_atlas
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc       105 Dec 11 16:08 job.xml
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc      6392 Dec 11 16:08 init_data.xml
[2025-12-12 07:36:53] -rw-r--r--. 2 boinc boinc 326616549 Dec 11 16:08 EVNT.47866638._000013.pool.root.1
[2025-12-12 07:36:53] -rw-r--r--. 2 boinc boinc     15847 Dec 11 16:08 start_atlas.sh
[2025-12-12 07:36:53] drwxrwx--x. 2 boinc boinc        68 Dec 11 16:08 shared
[2025-12-12 07:36:53] -rw-r--r--. 2 boinc boinc    592587 Dec 11 16:08 input.tar.gz
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc         0 Dec 11 16:08 boinc_lockfile
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc      2897 Dec 11 16:08 pandaJob.out
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc    988866 Dec 11 16:12 agis_schedconf.cvmfs.json
[2025-12-12 07:36:53] drwx------. 5 boinc boinc      4096 Dec 11 16:12 pilot3
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc       533 Dec 12 07:14 boinc_task_state.xml
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc 606232150 Dec 12 07:34 HITS.47866640._000129.pool.root.1
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc      1031 Dec 12 07:34 memory_monitor_summary.json
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc   1516240 Dec 12 07:34 agis_ddmendpoints.agis.ALL.json
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc   2176363 Dec 12 07:34 log.47866640._000129.job.log.tgz.1
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc     27523 Dec 12 07:36 heartbeat.json
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc        95 Dec 12 07:36 pilot_heartbeat.json
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc      4883 Dec 12 07:36 pilotlog.txt
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc   7420618 Dec 12 07:36 log.47866640._000129.job.log.1
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc        29 Dec 12 07:36 wrapper_checkpoint.txt
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc      8192 Dec 12 07:36 boinc_mmap_file
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc       353 Dec 12 07:36 output.list
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc       620 Dec 12 07:36 runtime_log
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc   9635840 Dec 12 07:36 result.tar.gz
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc       661 Dec 12 07:36 USaLDmk7wn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm60QKDm1o4tVn.diag
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc      8817 Dec 12 07:36 runtime_log.err
[2025-12-12 07:36:53] -rw-r--r--. 1 boinc boinc     21417 Dec 12 07:36 stderr.txt
[2025-12-12 07:36:53] HITS file was successfully produced:
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc 606232150 Dec 12 07:34 shared/HITS.pool.root.1
[2025-12-12 07:36:53]  *** Contents of shared directory: ***
[2025-12-12 07:36:53] total 920996
[2025-12-12 07:36:53] -rw-r--r--. 2 boinc boinc 326616549 Dec 11 16:08 ATLAS.root_0
[2025-12-12 07:36:53] -rw-r--r--. 2 boinc boinc     15847 Dec 11 16:08 start_atlas.sh
[2025-12-12 07:36:53] -rw-r--r--. 2 boinc boinc    592587 Dec 11 16:08 input.tar.gz
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc 606232150 Dec 12 07:34 HITS.pool.root.1
[2025-12-12 07:36:53] -rw-------. 1 boinc boinc   9635840 Dec 12 07:36 result.tar.gz
07:36:55 (30637): run_atlas exited; CPU time 202134.306733
07:36:55 (30637): called boinc_finish(0)

</stderr_txt>
]]>

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