Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:28:40 (3347940): wrapper (7.7.26015): starting
14:28:40 (3347940): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 14:28:40] Arguments: --nthreads 4
[2025-12-14 14:28:40] Threads: 4
[2025-12-14 14:28:40] Checking for CVMFS
[2025-12-14 14:28:40] No cvmfs_config command found, will try listing directly
[2025-12-14 14:28:40] CVMFS is ok
[2025-12-14 14:28:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 14:28:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 14:28:40] Further information can be found at the LHC@home message board.
[2025-12-14 14:28:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 14:28:40] Checking for apptainer binary...
[2025-12-14 14:28:40] which: no apptainer in ((null))
[2025-12-14 14:28:40] apptainer is not installed, using version from CVMFS
[2025-12-14 14:28:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 14:28:40] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-12-14 14:28:40] apptainer works
[2025-12-14 14:28:40] Set ATHENA_PROC_NUMBER=4
[2025-12-14 14:28:40] Set ATHENA_CORE_NUMBER=4
[2025-12-14 14:28:40] Starting ATLAS job with PandaID=6926908634
[2025-12-14 14:28:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 01:51:55]  *** The last 200 lines of the pilot log: ***
[2025-12-15 01:51:55] 2025-12-15 00:49:20,284 | INFO     | monitor loop #2882: job 0:6926908634 is in state 'finished'
[2025-12-15 01:51:55] 2025-12-15 00:49:20,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,307 | INFO     | PID=3351703 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-12-15 01:51:55] 2025-12-15 00:49:20,307 | INFO     | .. there are 5 such processes running
[2025-12-15 01:51:55] 2025-12-15 00:49:20,513 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-15 01:51:55] 2025-12-15 00:49:20,523 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2397.0625937499985
[2025-12-15 01:51:55] 2025-12-15 00:49:20,537 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6926908634/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,538 | INFO     | extracted standard info from prmon json
[2025-12-15 01:51:55] 2025-12-15 00:49:20,538 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 01:51:55] 2025-12-15 00:49:20,538 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 01:51:55] 2025-12-15 00:49:20,551 | INFO     | fitting pss+swap vs Time
[2025-12-15 01:51:55] 2025-12-15 00:49:20,552 | INFO     | sum of square deviations: 92844946225.1121
[2025-12-15 01:51:55] 2025-12-15 00:49:20,562 | INFO     | sum of deviations: 233562183821.1252
[2025-12-15 01:51:55] 2025-12-15 00:49:20,562 | INFO     | mean x: 1765739337.0762331
[2025-12-15 01:51:55] 2025-12-15 00:49:20,562 | INFO     | mean y: 2673431.605381166
[2025-12-15 01:51:55] 2025-12-15 00:49:20,563 | INFO     | intersect: -4439247775.677789
[2025-12-15 01:51:55] 2025-12-15 00:49:20,563 | INFO     | chi2: 4.640507384427098
[2025-12-15 01:51:55] 2025-12-15 00:49:20,564 | INFO     | sum of square deviations: 90778764900.08293
[2025-12-15 01:51:55] 2025-12-15 00:49:20,574 | INFO     | sum of deviations: 407273772682.3134
[2025-12-15 01:51:55] 2025-12-15 00:49:20,575 | INFO     | mean x: 1765739184.5768073
[2025-12-15 01:51:55] 2025-12-15 00:49:20,575 | INFO     | mean y: 2686244.0722891567
[2025-12-15 01:51:55] 2025-12-15 00:49:20,575 | INFO     | intersect: -7919202317.279255
[2025-12-15 01:51:55] 2025-12-15 00:49:20,576 | INFO     | chi2: 2.300592170563561
[2025-12-15 01:51:55] 2025-12-15 00:49:20,576 | INFO     | current chi2=2.300592170563561 (change=50.4236933598246 %)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,577 | INFO     | sum of square deviations: 88743467875.05322
[2025-12-15 01:51:55] 2025-12-15 00:49:20,587 | INFO     | sum of deviations: 413482666824.3945
[2025-12-15 01:51:55] 2025-12-15 00:49:20,587 | INFO     | mean x: 1765739032.07739
[2025-12-15 01:51:55] 2025-12-15 00:49:20,587 | INFO     | mean y: 2686704.717754173
[2025-12-15 01:51:55] 2025-12-15 00:49:20,587 | INFO     | intersect: -8224425683.173549
[2025-12-15 01:51:55] 2025-12-15 00:49:20,588 | INFO     | chi2: 2.2721682094042617
[2025-12-15 01:51:55] 2025-12-15 00:49:20,588 | INFO     | current chi2=2.2721682094042617 (change=1.2355062980300642 %)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,588 | INFO     | right removable region: 658
[2025-12-15 01:51:55] 2025-12-15 00:49:20,589 | INFO     | sum of square deviations: 90778733790.08286
[2025-12-15 01:51:55] 2025-12-15 00:49:20,599 | INFO     | sum of deviations: 78864600923.44891
[2025-12-15 01:51:55] 2025-12-15 00:49:20,599 | INFO     | mean x: 1765739489.5768073
[2025-12-15 01:51:55] 2025-12-15 00:49:20,599 | INFO     | mean y: 2684820.8343373495
[2025-12-15 01:51:55] 2025-12-15 00:49:20,600 | INFO     | intersect: -1531312563.4237604
[2025-12-15 01:51:55] 2025-12-15 00:49:20,600 | INFO     | chi2: 2.481331002839663
[2025-12-15 01:51:55] 2025-12-15 00:49:20,601 | INFO     | current chi2=2.481331002839663 (change=46.52888580316309 %)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,602 | INFO     | sum of square deviations: 88743405655.0532
[2025-12-15 01:51:55] 2025-12-15 00:49:20,613 | INFO     | sum of deviations: 73598878972.55394
[2025-12-15 01:51:55] 2025-12-15 00:49:20,613 | INFO     | mean x: 1765739642.07739
[2025-12-15 01:51:55] 2025-12-15 00:49:20,613 | INFO     | mean y: 2685213.9499241277
[2025-12-15 01:51:55] 2025-12-15 00:49:20,614 | INFO     | intersect: -1461721715.8386056
[2025-12-15 01:51:55] 2025-12-15 00:49:20,615 | INFO     | chi2: 2.4797725656998226
[2025-12-15 01:51:55] 2025-12-15 00:49:20,615 | INFO     | current chi2=2.4797725656998226 (change=0.06280649933672708 %)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,615 | INFO     | left removable region: 20
[2025-12-15 01:51:55] 2025-12-15 00:49:20,616 | INFO     | sum of square deviations: 80527104015.42325
[2025-12-15 01:51:55] 2025-12-15 00:49:20,625 | INFO     | sum of deviations: 254124989990.84332
[2025-12-15 01:51:55] 2025-12-15 00:49:20,626 | INFO     | mean x: 1765739611.5799372
[2025-12-15 01:51:55] 2025-12-15 00:49:20,626 | INFO     | mean y: 2698652.581504702
[2025-12-15 01:51:55] 2025-12-15 00:49:20,626 | INFO     | intersect: -5569568804.512751
[2025-12-15 01:51:55] 2025-12-15 00:49:20,627 | INFO     | chi2: 0.07839189062565863
[2025-12-15 01:51:55] 2025-12-15 00:49:20,627 | INFO     | current memory leak: 3.16 B/s (using 638 data points, chi2=0.08)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,628 | INFO     | could have reported an average CPU frequency of 2631 MHz (26 samples)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,628 | INFO     | ..............................
[2025-12-15 01:51:55] 2025-12-15 00:49:20,628 | INFO     | . Timing measurements:
[2025-12-15 01:51:55] 2025-12-15 00:49:20,628 | INFO     | . get job = 0 s
[2025-12-15 01:51:55] 2025-12-15 00:49:20,628 | INFO     | . initial setup = 1 s
[2025-12-15 01:51:55] 2025-12-15 00:49:20,628 | INFO     | . payload setup = 10 s
[2025-12-15 01:51:55] 2025-12-15 00:49:20,628 | INFO     | . stage-in = 0 s
[2025-12-15 01:51:55] 2025-12-15 00:49:20,629 | INFO     | . payload execution = 40787 s
[2025-12-15 01:51:55] 2025-12-15 00:49:20,629 | INFO     | . stage-out = 1 s
[2025-12-15 01:51:55] 2025-12-15 00:49:20,629 | INFO     | . log creation = 0 s
[2025-12-15 01:51:55] 2025-12-15 00:49:20,629 | INFO     | ..............................
[2025-12-15 01:51:55] 2025-12-15 00:49:20,796 | INFO     | 
[2025-12-15 01:51:55] 2025-12-15 00:49:20,796 | INFO     | job summary report
[2025-12-15 01:51:55] 2025-12-15 00:49:20,796 | INFO     | --------------------------------------------------
[2025-12-15 01:51:55] 2025-12-15 00:49:20,796 | INFO     | PanDA job id: 6926908634
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | task id: 47866654
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | errors: (none)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | pilot state: finished 
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | transexitcode: 0
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | exeerrorcode: 0
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | exeerrordiag: 
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | exitcode: 0
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | exitmsg: OK
[2025-12-15 01:51:55] 2025-12-15 00:49:20,797 | INFO     | cpuconsumptiontime: 158838 s
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | nevents: 1000
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | neventsw: 0
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | pid: 3359344
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | pgrp: 3359344
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | corecount: 4
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | event service: False
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | sizes: {0: 2284364, 1: 2284563, 5: 2284825, 11: 2284881, 40801: 2347686, 40803: 2356702, 40807: 2356886, 40814: 2357132}
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | --------------------------------------------------
[2025-12-15 01:51:55] 2025-12-15 00:49:20,798 | INFO     | 
[2025-12-15 01:51:55] 2025-12-15 00:49:20,799 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-12-15 01:51:55] 2025-12-15 00:49:20,821 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,822 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,822 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,822 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,823 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 01:51:55] 2025-12-15 00:49:20,824 | INFO     | job 6926908634 has completed (purged errors)
[2025-12-15 01:51:55] 2025-12-15 00:49:20,824 | INFO     | overall cleanup function is called
[2025-12-15 01:51:55] 2025-12-15 00:49:21,838 | INFO     | --- collectZombieJob: --- 10, [3359344]
[2025-12-15 01:51:55] 2025-12-15 00:49:21,838 | INFO     | zombie collector waiting for pid 3359344
[2025-12-15 01:51:55] 2025-12-15 00:49:21,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 01:51:55] 2025-12-15 00:49:21,838 | INFO     | collected zombie processes
[2025-12-15 01:51:55] 2025-12-15 00:49:21,838 | INFO     | will attempt to kill all subprocesses of pid=3359344
[2025-12-15 01:51:55] 2025-12-15 00:49:22,294 | INFO     | process IDs to be killed: [3359344] (in reverse order)
[2025-12-15 01:51:55] 2025-12-15 00:49:22,422 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 01:51:55] 2025-12-15 00:49:22,422 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 01:51:55] 2025-12-15 00:49:22,453 | INFO     | did not find any defunct processes belonging to 3359344
[2025-12-15 01:51:55] 2025-12-15 00:49:22,477 | INFO     | did not find any defunct processes belonging to 3359344
[2025-12-15 01:51:55] 2025-12-15 00:49:22,478 | INFO     | ready for new job
[2025-12-15 01:51:55] 2025-12-15 00:49:22,479 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 01:51:55] 2025-12-15 00:49:22,485 | INFO     | ***************************************
[2025-12-15 01:51:55] 2025-12-15 00:49:22,485 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 01:51:55] 2025-12-15 00:49:22,485 | INFO     | ***************************************
[2025-12-15 01:51:55] 2025-12-15 00:49:22,485 | INFO     | 
[2025-12-15 01:51:55] 2025-12-15 00:49:22,490 | INFO     | architecture information:
[2025-12-15 01:51:55] 2025-12-15 00:49:22,491 | INFO     | executing command: cat /etc/os-release
[2025-12-15 01:51:55] 2025-12-15 00:49:22,512 | INFO     | cat /etc/os-release:
[2025-12-15 01:51:55] NAME="CentOS Linux"
[2025-12-15 01:51:55] VERSION="7 (Core)"
[2025-12-15 01:51:55] ID="centos"
[2025-12-15 01:51:55] ID_LIKE="rhel fedora"
[2025-12-15 01:51:55] VERSION_ID="7"
[2025-12-15 01:51:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 01:51:55] ANSI_COLOR="0;31"
[2025-12-15 01:51:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 01:51:55] HOME_URL="https://www.centos.org/"
[2025-12-15 01:51:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 01:51:55] 
[2025-12-15 01:51:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 01:51:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 01:51:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 01:51:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 01:51:55] 
[2025-12-15 01:51:55] 2025-12-15 00:49:22,513 | INFO     | ***************************************
[2025-12-15 01:51:55] 2025-12-15 00:49:23,018 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-12-15 01:51:55] 2025-12-15 00:49:23,036 | INFO     | sufficient remaining disk space (656305815552 B)
[2025-12-15 01:51:55] 2025-12-15 00:49:23,037 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 01:51:55] 2025-12-15 00:49:23,037 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 01:51:55] 2025-12-15 00:49:23,037 | INFO     | update_server=False
[2025-12-15 01:51:55] 2025-12-15 00:49:23,037 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 01:51:55] 2025-12-15 00:49:23,164 | INFO     | all job control threads have been joined
[2025-12-15 01:51:55] 2025-12-15 00:49:23,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 01:51:55] 2025-12-15 00:49:23,431 | INFO     | all payload control threads have been joined
[2025-12-15 01:51:55] 2025-12-15 00:49:23,449 | INFO     | all data control threads have been joined
[2025-12-15 01:51:55] 2025-12-15 00:49:23,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 01:51:55] 2025-12-15 00:49:23,801 | INFO     | aborting loop
[2025-12-15 01:51:55] 2025-12-15 00:49:24,042 | INFO     | [job] retrieve thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:24,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 01:51:55] 2025-12-15 00:49:24,169 | INFO     | [job] control thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:24,436 | INFO     | [payload] control thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:24,455 | INFO     | [data] control thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:24,609 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:24,777 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:24,806 | INFO     | [job] job monitor thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:24,933 | INFO     | [data] copytool_in thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:25,042 | INFO     | [payload] validate_post thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:25,051 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:25,229 | INFO     | [job] validate thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:25,341 | INFO     | [data] copytool_out thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:25,403 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:25,569 | INFO     | [payload] failed_post thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:25,747 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 01:51:55] 2025-12-15 00:49:26,752 | INFO     | [job] queue monitor thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:28,082 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 01:51:55] 2025-12-15 00:49:52,925 | INFO     | PID=3351703 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 01:51:55] 2025-12-15 00:49:52,926 | INFO     | .. there are 5 such processes running
[2025-12-15 01:51:55] 2025-12-15 00:49:52,927 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 01:51:55] 2025-12-15 00:49:52,927 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 01:51:55] 2025-12-15 00:49:52,927 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 01:51:55] 2025-12-15 00:49:58,663 | INFO     | [monitor] cgroup control has ended
[2025-12-15 01:51:55] 2025-12-15 00:50:00,069 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22902212073280)>', '<ExcThread(monitor, started 22901501716224)>']
[2025-12-15 01:51:55] 2025-12-15 00:50:00,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 01:51:55] 2025-12-15 00:50:00,978 | INFO     | [monitor] control thread has ended
[2025-12-15 01:51:55] 2025-12-15 00:50:05,094 | INFO     | all workflow threads have been joined
[2025-12-15 01:51:55] 2025-12-15 00:50:05,094 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 01:51:55] 2025-12-15 00:50:05,094 | INFO     | traces error code: 0
[2025-12-15 01:51:55] 2025-12-15 00:50:05,095 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 01:51:55] 2025-12-15 00:50:05,320 [wrapper] ==== pilot stdout END ====
[2025-12-15 01:51:55] 2025-12-15 00:50:05,323 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 01:51:55] 2025-12-15 00:50:05,326 [wrapper] pilotpid: 3351703
[2025-12-15 01:51:55] 2025-12-15 00:50:05,329 [wrapper] Pilot exit status: 0
[2025-12-15 01:51:55] 2025-12-15 00:50:05,340 [wrapper] pandaids: 6926908634
[2025-12-15 01:51:55] 2025-12-15 00:50:05,426 [wrapper] cleanup supervisor_pilot 4142920 3351704
[2025-12-15 01:51:55] 2025-12-15 00:50:05,429 [wrapper] Test setup, not cleaning
[2025-12-15 01:51:55] 2025-12-15 00:50:05,432 [wrapper] apfmon messages muted
[2025-12-15 01:51:55] 2025-12-15 00:50:05,435 [wrapper] ==== wrapper stdout END ====
[2025-12-15 01:51:55] 2025-12-15 00:50:05,438 [wrapper] ==== wrapper stderr END ====
[2025-12-15 01:51:55]  *** Error codes and diagnostics ***
[2025-12-15 01:51:55]     "exeErrorCode": 0,
[2025-12-15 01:51:55]     "exeErrorDiag": "",
[2025-12-15 01:51:55]     "pilotErrorCode": 0,
[2025-12-15 01:51:55]     "pilotErrorDiag": "",
[2025-12-15 01:51:55]  *** Listing of results directory ***
[2025-12-15 01:51:55] total 914708
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc    579449 Dec 11 15:24 pilot3.tar.gz
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc      5112 Dec 11 15:27 queuedata.json
[2025-12-15 01:51:55] -rwx------ 1 boinc boinc     36292 Dec 11 15:27 runpilot2-wrapper.sh
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc       100 Dec 14 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 01:51:55] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 14:28 run_atlas
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc       105 Dec 14 14:28 job.xml
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc      6638 Dec 14 14:28 init_data.xml
[2025-12-15 01:51:55] -rw-r--r-- 2 boinc boinc 325199998 Dec 14 14:28 EVNT.47866652._000020.pool.root.1
[2025-12-15 01:51:55] -rw-r--r-- 2 boinc boinc     15847 Dec 14 14:28 start_atlas.sh
[2025-12-15 01:51:55] drwxrwx--x 2 boinc boinc      4096 Dec 14 14:28 shared
[2025-12-15 01:51:55] -rw-r--r-- 2 boinc boinc    592577 Dec 14 14:28 input.tar.gz
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc         0 Dec 14 14:28 boinc_lockfile
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc      2822 Dec 14 14:28 pandaJob.out
[2025-12-15 01:51:55] -rw------- 1 boinc boinc    991736 Dec 14 14:28 agis_schedconf.cvmfs.json
[2025-12-15 01:51:55] drwx------ 5 boinc boinc      4096 Dec 14 14:28 pilot3
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc       530 Dec 15 01:41 boinc_task_state.xml
[2025-12-15 01:51:55] -rw------- 1 boinc boinc 593066977 Dec 15 01:48 HITS.47866654._000194.pool.root.1
[2025-12-15 01:51:55] -rw------- 1 boinc boinc      1062 Dec 15 01:49 memory_monitor_summary.json
[2025-12-15 01:51:55] -rw------- 1 boinc boinc   1516240 Dec 15 01:49 agis_ddmendpoints.agis.ALL.json
[2025-12-15 01:51:55] -rw------- 1 boinc boinc   1533997 Dec 15 01:49 log.47866654._000194.job.log.tgz.1
[2025-12-15 01:51:55] -rw------- 1 boinc boinc     28022 Dec 15 01:49 heartbeat.json
[2025-12-15 01:51:55] -rw------- 1 boinc boinc        95 Dec 15 01:49 pilot_heartbeat.json
[2025-12-15 01:51:55] -rw------- 1 boinc boinc      4833 Dec 15 01:50 pilotlog.txt
[2025-12-15 01:51:55] -rw------- 1 boinc boinc   5692438 Dec 15 01:50 log.47866654._000194.job.log.1
[2025-12-15 01:51:55] -rw------- 1 boinc boinc       353 Dec 15 01:50 output.list
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc       620 Dec 15 01:50 runtime_log
[2025-12-15 01:51:55] -rw------- 1 boinc boinc   7270400 Dec 15 01:50 result.tar.gz
[2025-12-15 01:51:55] -rw------- 1 boinc boinc       672 Dec 15 01:50 tovLDm3own8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJyQKDm5biXDm.diag
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc      9206 Dec 15 01:50 runtime_log.err
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc        28 Dec 15 01:51 wrapper_checkpoint.txt
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc      8192 Dec 15 01:51 boinc_mmap_file
[2025-12-15 01:51:55] -rw-r--r-- 1 boinc boinc      1893 Dec 15 01:51 stderr.txt
[2025-12-15 01:51:55] HITS file was successfully produced:
[2025-12-15 01:51:55] -rw------- 1 boinc boinc 593066977 Dec 15 01:48 shared/HITS.pool.root.1
[2025-12-15 01:51:55]  *** Contents of shared directory: ***
[2025-12-15 01:51:55] total 904452
[2025-12-15 01:51:55] -rw-r--r-- 2 boinc boinc 325199998 Dec 14 14:28 ATLAS.root_0
[2025-12-15 01:51:55] -rw-r--r-- 2 boinc boinc     15847 Dec 14 14:28 start_atlas.sh
[2025-12-15 01:51:55] -rw-r--r-- 2 boinc boinc    592577 Dec 14 14:28 input.tar.gz
[2025-12-15 01:51:55] -rw------- 1 boinc boinc 593066977 Dec 15 01:48 HITS.pool.root.1
[2025-12-15 01:51:55] -rw------- 1 boinc boinc   7270400 Dec 15 01:50 result.tar.gz
01:51:57 (3347940): run_atlas exited; CPU time 160441.612688
01:51:57 (3347940): called boinc_finish(0)

</stderr_txt>
]]>

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