Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:56:30 (972894): wrapper (7.7.26015): starting
02:56:30 (972894): wrapper: running run_atlas (--nthreads 4)
[2025-12-13 02:56:30] Arguments: --nthreads 4
[2025-12-13 02:56:30] Threads: 4
[2025-12-13 02:56:30] Checking for CVMFS
[2025-12-13 02:56:30] No cvmfs_config command found, will try listing directly
[2025-12-13 02:56:30] CVMFS is ok
[2025-12-13 02:56:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-13 02:56:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-13 02:56:30] Further information can be found at the LHC@home message board.
[2025-12-13 02:56:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-13 02:56:30] Checking for apptainer binary...
[2025-12-13 02:56:30] which: no apptainer in ((null))
[2025-12-13 02:56:30] apptainer is not installed, using version from CVMFS
[2025-12-13 02:56:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-13 02:56:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/1/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut08.grid.cesnet.cz
[2025-12-13 02:56:30] apptainer works
[2025-12-13 02:56:30] Set ATHENA_PROC_NUMBER=4
[2025-12-13 02:56:30] Set ATHENA_CORE_NUMBER=4
[2025-12-13 02:56:30] Starting ATLAS job with PandaID=6926908573
[2025-12-13 02:56:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-13 15:26:28]  *** The last 200 lines of the pilot log: ***
[2025-12-13 15:26:28] 2025-12-13 14:19:29,155 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,351 | INFO     | time since job start (44566s) is within the limit (174528.0s)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,771 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-13 15:26:28] 2025-12-13 14:19:30,783 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2703.5778906250016
[2025-12-13 15:26:28] 2025-12-13 14:19:30,798 | INFO     | using path: /scratch/boinc/var/slot52/slots/1/PanDA_Pilot-6926908573/memory_monitor_summary.json (trf name=prmon)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,799 | INFO     | extracted standard info from prmon json
[2025-12-13 15:26:28] 2025-12-13 14:19:30,799 | INFO     | extracted standard memory fields from prmon json
[2025-12-13 15:26:28] 2025-12-13 14:19:30,800 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-13 15:26:28] 2025-12-13 14:19:30,815 | INFO     | fitting pss+swap vs Time
[2025-12-13 15:26:28] 2025-12-13 14:19:30,816 | INFO     | sum of square deviations: 120628069054.37814
[2025-12-13 15:26:28] 2025-12-13 14:19:30,831 | INFO     | sum of deviations: 501768607817.87665
[2025-12-13 15:26:28] 2025-12-13 14:19:30,831 | INFO     | mean x: 1765613270.6054795
[2025-12-13 15:26:28] 2025-12-13 14:19:30,831 | INFO     | mean y: 2660166.2808219176
[2025-12-13 15:26:28] 2025-12-13 14:19:30,831 | INFO     | intersect: -7341644684.832312
[2025-12-13 15:26:28] 2025-12-13 14:19:30,832 | INFO     | chi2: 3.9668279818876284
[2025-12-13 15:26:28] 2025-12-13 14:19:30,834 | INFO     | sum of square deviations: 118166381266.82095
[2025-12-13 15:26:28] 2025-12-13 14:19:30,847 | INFO     | sum of deviations: 632943779142.5131
[2025-12-13 15:26:28] 2025-12-13 14:19:30,848 | INFO     | mean x: 1765613118.106207
[2025-12-13 15:26:28] 2025-12-13 14:19:30,848 | INFO     | mean y: 2668272.019310345
[2025-12-13 15:26:28] 2025-12-13 14:19:30,848 | INFO     | intersect: -9454622604.599274
[2025-12-13 15:26:28] 2025-12-13 14:19:30,849 | INFO     | chi2: 2.383044951715504
[2025-12-13 15:26:28] 2025-12-13 14:19:30,849 | INFO     | current chi2=2.383044951715504 (change=39.92567959597975 %)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,851 | INFO     | sum of square deviations: 115738415041.76543
[2025-12-13 15:26:28] 2025-12-13 14:19:30,863 | INFO     | sum of deviations: 621296342670.0609
[2025-12-13 15:26:28] 2025-12-13 14:19:30,864 | INFO     | mean x: 1765612965.6069446
[2025-12-13 15:26:28] 2025-12-13 14:19:30,864 | INFO     | mean y: 2667540.427777778
[2025-12-13 15:26:28] 2025-12-13 14:19:30,864 | INFO     | intersect: -9475334017.7116
[2025-12-13 15:26:28] 2025-12-13 14:19:30,865 | INFO     | chi2: 2.3831910163508243
[2025-12-13 15:26:28] 2025-12-13 14:19:30,865 | INFO     | current chi2=2.3831910163508243 (change=-0.006129327741595381 %)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,865 | INFO     | right removable region: 719
[2025-12-13 15:26:28] 2025-12-13 14:19:30,867 | INFO     | sum of square deviations: 118166334296.82097
[2025-12-13 15:26:28] 2025-12-13 14:19:30,881 | INFO     | sum of deviations: 318365236336.0415
[2025-12-13 15:26:28] 2025-12-13 14:19:30,881 | INFO     | mean x: 1765613423.106207
[2025-12-13 15:26:28] 2025-12-13 14:19:30,882 | INFO     | mean y: 2671507.324137931
[2025-12-13 15:26:28] 2025-12-13 14:19:30,882 | INFO     | intersect: -4754266567.045978
[2025-12-13 15:26:28] 2025-12-13 14:19:30,883 | INFO     | chi2: 1.6535972530782932
[2025-12-13 15:26:28] 2025-12-13 14:19:30,883 | INFO     | current chi2=1.6535972530782932 (change=58.31436955097248 %)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,884 | INFO     | sum of square deviations: 115738321101.76547
[2025-12-13 15:26:28] 2025-12-13 14:19:30,897 | INFO     | sum of deviations: 308599297049.90393
[2025-12-13 15:26:28] 2025-12-13 14:19:30,898 | INFO     | mean x: 1765613575.6069446
[2025-12-13 15:26:28] 2025-12-13 14:19:30,898 | INFO     | mean y: 2672119.5791666666
[2025-12-13 15:26:28] 2025-12-13 14:19:30,898 | INFO     | intersect: -4705078114.805037
[2025-12-13 15:26:28] 2025-12-13 14:19:30,899 | INFO     | chi2: 1.6521459856903005
[2025-12-13 15:26:28] 2025-12-13 14:19:30,900 | INFO     | current chi2=1.6521459856903005 (change=0.08776425972473564 %)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,900 | INFO     | left removable region: 20
[2025-12-13 15:26:28] 2025-12-13 14:19:30,901 | INFO     | sum of square deviations: 105903760008.518
[2025-12-13 15:26:28] 2025-12-13 14:19:30,913 | INFO     | sum of deviations: 414494107041.51904
[2025-12-13 15:26:28] 2025-12-13 14:19:30,913 | INFO     | mean x: 1765613545.1101573
[2025-12-13 15:26:28] 2025-12-13 14:19:30,913 | INFO     | mean y: 2680473.278969957
[2025-12-13 15:26:28] 2025-12-13 14:19:30,913 | INFO     | intersect: -6907710713.039464
[2025-12-13 15:26:28] 2025-12-13 14:19:30,914 | INFO     | chi2: 0.043072935471169034
[2025-12-13 15:26:28] 2025-12-13 14:19:30,915 | INFO     | current memory leak: 3.91 B/s (using 699 data points, chi2=0.04)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,916 | INFO     | could have reported an average CPU frequency of 2590 MHz (28 samples)
[2025-12-13 15:26:28] 2025-12-13 14:19:30,916 | INFO     | ..............................
[2025-12-13 15:26:28] 2025-12-13 14:19:30,916 | INFO     | . Timing measurements:
[2025-12-13 15:26:28] 2025-12-13 14:19:30,916 | INFO     | . get job = 0 s
[2025-12-13 15:26:28] 2025-12-13 14:19:30,917 | INFO     | . initial setup = 1 s
[2025-12-13 15:26:28] 2025-12-13 14:19:30,917 | INFO     | . payload setup = 11 s
[2025-12-13 15:26:28] 2025-12-13 14:19:30,917 | INFO     | . stage-in = 0 s
[2025-12-13 15:26:28] 2025-12-13 14:19:30,917 | INFO     | . payload execution = 44521 s
[2025-12-13 15:26:28] 2025-12-13 14:19:30,917 | INFO     | . stage-out = 1 s
[2025-12-13 15:26:28] 2025-12-13 14:19:30,917 | INFO     | . log creation = 0 s
[2025-12-13 15:26:28] 2025-12-13 14:19:30,917 | INFO     | ..............................
[2025-12-13 15:26:28] 2025-12-13 14:19:31,038 | INFO     | 
[2025-12-13 15:26:28] 2025-12-13 14:19:31,038 | INFO     | job summary report
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | --------------------------------------------------
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | PanDA job id: 6926908573
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | task id: 47866654
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | errors: (none)
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | pilot state: finished 
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | transexitcode: 0
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | exeerrorcode: 0
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | exeerrordiag: 
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | exitcode: 0
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | exitmsg: OK
[2025-12-13 15:26:28] 2025-12-13 14:19:31,039 | INFO     | cpuconsumptiontime: 170017 s
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | nevents: 1000
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | neventsw: 0
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | pid: 985329
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | pgrp: 985329
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | corecount: 4
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | event service: False
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | sizes: {0: 2283696, 1: 2284563, 6: 2284825, 12: 2284853, 44535: 2349801, 44539: 2359001, 44550: 2359191}
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | --------------------------------------------------
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | 
[2025-12-13 15:26:28] 2025-12-13 14:19:31,040 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/1
[2025-12-13 15:26:28] 2025-12-13 14:19:31,063 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,064 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,064 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,064 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-13 15:26:28] 2025-12-13 14:19:31,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,066 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-13 15:26:28] 2025-12-13 14:19:31,066 | INFO     | job 6926908573 has completed (purged errors)
[2025-12-13 15:26:28] 2025-12-13 14:19:31,066 | INFO     | overall cleanup function is called
[2025-12-13 15:26:28] 2025-12-13 14:19:32,076 | INFO     | --- collectZombieJob: --- 10, [985329]
[2025-12-13 15:26:28] 2025-12-13 14:19:32,077 | INFO     | zombie collector waiting for pid 985329
[2025-12-13 15:26:28] 2025-12-13 14:19:32,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-13 15:26:28] 2025-12-13 14:19:32,077 | INFO     | collected zombie processes
[2025-12-13 15:26:28] 2025-12-13 14:19:32,077 | INFO     | will attempt to kill all subprocesses of pid=985329
[2025-12-13 15:26:28] 2025-12-13 14:19:32,476 | INFO     | process IDs to be killed: [985329] (in reverse order)
[2025-12-13 15:26:28] 2025-12-13 14:19:32,592 | WARNING  | found no corresponding commands to process id(s)
[2025-12-13 15:26:28] 2025-12-13 14:19:32,593 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-13 15:26:28] 2025-12-13 14:19:32,606 | INFO     | did not find any defunct processes belonging to 985329
[2025-12-13 15:26:28] 2025-12-13 14:19:32,619 | INFO     | did not find any defunct processes belonging to 985329
[2025-12-13 15:26:28] 2025-12-13 14:19:32,620 | INFO     | ready for new job
[2025-12-13 15:26:28] 2025-12-13 14:19:32,620 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-13 15:26:28] 2025-12-13 14:19:32,625 | INFO     | ***************************************
[2025-12-13 15:26:28] 2025-12-13 14:19:32,625 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-13 15:26:28] 2025-12-13 14:19:32,625 | INFO     | ***************************************
[2025-12-13 15:26:28] 2025-12-13 14:19:32,625 | INFO     | 
[2025-12-13 15:26:28] 2025-12-13 14:19:32,629 | INFO     | architecture information:
[2025-12-13 15:26:28] 2025-12-13 14:19:32,630 | INFO     | executing command: cat /etc/os-release
[2025-12-13 15:26:28] 2025-12-13 14:19:32,647 | INFO     | cat /etc/os-release:
[2025-12-13 15:26:28] NAME="CentOS Linux"
[2025-12-13 15:26:28] VERSION="7 (Core)"
[2025-12-13 15:26:28] ID="centos"
[2025-12-13 15:26:28] ID_LIKE="rhel fedora"
[2025-12-13 15:26:28] VERSION_ID="7"
[2025-12-13 15:26:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-13 15:26:28] ANSI_COLOR="0;31"
[2025-12-13 15:26:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-13 15:26:28] HOME_URL="https://www.centos.org/"
[2025-12-13 15:26:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-13 15:26:28] 
[2025-12-13 15:26:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-13 15:26:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-13 15:26:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-13 15:26:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-13 15:26:28] 
[2025-12-13 15:26:28] 2025-12-13 14:19:32,648 | INFO     | ***************************************
[2025-12-13 15:26:28] 2025-12-13 14:19:33,151 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/1
[2025-12-13 15:26:28] 2025-12-13 14:19:33,169 | INFO     | sufficient remaining disk space (676620926976 B)
[2025-12-13 15:26:28] 2025-12-13 14:19:33,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-13 15:26:28] 2025-12-13 14:19:33,169 | INFO     | current server update state: UPDATING_FINAL
[2025-12-13 15:26:28] 2025-12-13 14:19:33,169 | INFO     | update_server=False
[2025-12-13 15:26:28] 2025-12-13 14:19:33,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-13 15:26:28] 2025-12-13 14:19:33,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-13 15:26:28] 2025-12-13 14:19:33,170 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-13 15:26:28] 2025-12-13 14:19:33,171 | INFO     | aborting loop
[2025-12-13 15:26:28] 2025-12-13 14:19:33,592 | INFO     | all payload control threads have been joined
[2025-12-13 15:26:28] 2025-12-13 14:19:33,715 | INFO     | all job control threads have been joined
[2025-12-13 15:26:28] 2025-12-13 14:19:34,173 | INFO     | [job] retrieve thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:34,176 | INFO     | [job] job monitor thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:34,193 | INFO     | all data control threads have been joined
[2025-12-13 15:26:28] 2025-12-13 14:19:34,336 | INFO     | [job] create_data_payload thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:34,597 | INFO     | [payload] control thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:34,721 | INFO     | [job] control thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:34,857 | INFO     | [payload] validate_post thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:34,859 | INFO     | [payload] failed_post thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:35,101 | INFO     | [data] copytool_in thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:35,162 | INFO     | [payload] execute_payloads thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:35,176 | INFO     | [data] copytool_out thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:35,196 | INFO     | [data] control thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:35,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-13 15:26:28] 2025-12-13 14:19:35,356 | INFO     | [job] validate thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:35,416 | INFO     | [payload] validate_pre thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:36,045 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-13 15:26:28] 2025-12-13 14:19:37,051 | INFO     | [job] queue monitor thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:39,243 | INFO     | [data] queue_monitor thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:43,520 | INFO     | job.realtimelogging is not enabled
[2025-12-13 15:26:28] 2025-12-13 14:19:44,525 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-13 15:26:28] 2025-12-13 14:19:57,484 | INFO     | [monitor] cgroup control has ended
[2025-12-13 15:26:28] 2025-12-13 14:19:58,490 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23063430215488)>', '<ExcThread(monitor, started 23063192110848)>']
[2025-12-13 15:26:28] 2025-12-13 14:20:03,515 | INFO     | all workflow threads have been joined
[2025-12-13 15:26:28] 2025-12-13 14:20:03,515 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-13 15:26:28] 2025-12-13 14:20:03,515 | INFO     | traces error code: 0
[2025-12-13 15:26:28] 2025-12-13 14:20:03,516 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-13 15:26:28] 2025-12-13 14:20:03,946 | INFO     | PID=976936 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-13 15:26:28] 2025-12-13 14:20:03,947 | INFO     | .. there are 4 such processes running
[2025-12-13 15:26:28] 2025-12-13 14:20:03,948 | INFO     | found 0 job(s) in 20 queues
[2025-12-13 15:26:28] 2025-12-13 14:20:03,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-13 15:26:28] 2025-12-13 14:20:03,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-13 15:26:28] 2025-12-13 14:20:03,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-13 15:26:28] 2025-12-13 14:20:03,948 | CRITICAL | thread 'MainThread' is not alive
[2025-12-13 15:26:28] 2025-12-13 14:20:03,948 | INFO     | [monitor] control thread has ended
[2025-12-13 15:26:28] 2025-12-13 14:20:04,171 [wrapper] ==== pilot stdout END ====
[2025-12-13 15:26:28] 2025-12-13 14:20:04,173 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-13 15:26:28] 2025-12-13 14:20:04,176 [wrapper] pilotpid: 976936
[2025-12-13 15:26:28] 2025-12-13 14:20:04,179 [wrapper] Pilot exit status: 0
[2025-12-13 15:26:28] 2025-12-13 14:20:04,189 [wrapper] pandaids: 6926908573
[2025-12-13 15:26:28] 2025-12-13 14:20:04,268 [wrapper] cleanup supervisor_pilot 1852706 976937
[2025-12-13 15:26:28] 2025-12-13 14:20:04,271 [wrapper] Test setup, not cleaning
[2025-12-13 15:26:28] 2025-12-13 14:20:04,274 [wrapper] apfmon messages muted
[2025-12-13 15:26:28] 2025-12-13 14:20:04,277 [wrapper] ==== wrapper stdout END ====
[2025-12-13 15:26:28] 2025-12-13 14:20:04,280 [wrapper] ==== wrapper stderr END ====
[2025-12-13 15:26:28]  *** Error codes and diagnostics ***
[2025-12-13 15:26:28]     "exeErrorCode": 0,
[2025-12-13 15:26:28]     "exeErrorDiag": "",
[2025-12-13 15:26:28]     "pilotErrorCode": 0,
[2025-12-13 15:26:28]     "pilotErrorDiag": "",
[2025-12-13 15:26:28]  *** Listing of results directory ***
[2025-12-13 15:26:28] total 917624
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc    579449 Dec 11 15:24 pilot3.tar.gz
[2025-12-13 15:26:28] -rwx------ 1 boinc boinc     36292 Dec 11 15:27 runpilot2-wrapper.sh
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc      5112 Dec 11 15:27 queuedata.json
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc       100 Dec 13 02:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-13 15:26:28] -rwxr-xr-x 1 boinc boinc      7986 Dec 13 02:56 run_atlas
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc       105 Dec 13 02:56 job.xml
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc      6638 Dec 13 02:56 init_data.xml
[2025-12-13 15:26:28] -rw-r--r-- 2 boinc boinc 326506397 Dec 13 02:56 EVNT.47866652._000014.pool.root.1
[2025-12-13 15:26:28] -rw-r--r-- 2 boinc boinc     15847 Dec 13 02:56 start_atlas.sh
[2025-12-13 15:26:28] drwxrwx--x 2 boinc boinc      4096 Dec 13 02:56 shared
[2025-12-13 15:26:28] -rw-r--r-- 2 boinc boinc    592578 Dec 13 02:56 input.tar.gz
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc         0 Dec 13 02:56 boinc_lockfile
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc      2822 Dec 13 02:56 pandaJob.out
[2025-12-13 15:26:28] -rw------- 1 boinc boinc    991720 Dec 13 02:56 agis_schedconf.cvmfs.json
[2025-12-13 15:26:28] drwx------ 5 boinc boinc      4096 Dec 13 02:56 pilot3
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc       530 Dec 13 15:14 boinc_task_state.xml
[2025-12-13 15:26:28] -rw------- 1 boinc boinc 593582954 Dec 13 15:18 HITS.47866654._000140.pool.root.1
[2025-12-13 15:26:28] -rw------- 1 boinc boinc      1042 Dec 13 15:19 memory_monitor_summary.json
[2025-12-13 15:26:28] -rw------- 1 boinc boinc   1516240 Dec 13 15:19 agis_ddmendpoints.agis.ALL.json
[2025-12-13 15:26:28] -rw------- 1 boinc boinc   1591792 Dec 13 15:19 log.47866654._000140.job.log.tgz.1
[2025-12-13 15:26:28] -rw------- 1 boinc boinc     28193 Dec 13 15:19 heartbeat.json
[2025-12-13 15:26:28] -rw------- 1 boinc boinc        95 Dec 13 15:20 pilot_heartbeat.json
[2025-12-13 15:26:28] -rw------- 1 boinc boinc       891 Dec 13 15:20 pilotlog.txt
[2025-12-13 15:26:28] -rw------- 1 boinc boinc   6208597 Dec 13 15:20 log.47866654._000140.job.log.1
[2025-12-13 15:26:28] -rw------- 1 boinc boinc       353 Dec 13 15:20 output.list
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc       620 Dec 13 15:20 runtime_log
[2025-12-13 15:26:28] -rw------- 1 boinc boinc   7843840 Dec 13 15:20 result.tar.gz
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc      9206 Dec 13 15:20 runtime_log.err
[2025-12-13 15:26:28] -rw------- 1 boinc boinc       669 Dec 13 15:20 FT5NDmqown8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0JNKDmaDKTQn.diag
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc        27 Dec 13 15:26 wrapper_checkpoint.txt
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc      8192 Dec 13 15:26 boinc_mmap_file
[2025-12-13 15:26:28] -rw-r--r-- 1 boinc boinc     20945 Dec 13 15:26 stderr.txt
[2025-12-13 15:26:28] HITS file was successfully produced:
[2025-12-13 15:26:28] -rw------- 1 boinc boinc 593582954 Dec 13 15:18 shared/HITS.pool.root.1
[2025-12-13 15:26:28]  *** Contents of shared directory: ***
[2025-12-13 15:26:28] total 906792
[2025-12-13 15:26:28] -rw-r--r-- 2 boinc boinc 326506397 Dec 13 02:56 ATLAS.root_0
[2025-12-13 15:26:28] -rw-r--r-- 2 boinc boinc     15847 Dec 13 02:56 start_atlas.sh
[2025-12-13 15:26:28] -rw-r--r-- 2 boinc boinc    592578 Dec 13 02:56 input.tar.gz
[2025-12-13 15:26:28] -rw------- 1 boinc boinc 593582954 Dec 13 15:18 HITS.pool.root.1
[2025-12-13 15:26:28] -rw------- 1 boinc boinc   7843840 Dec 13 15:20 result.tar.gz
15:26:30 (972894): run_atlas exited; CPU time 171499.207791
15:26:30 (972894): called boinc_finish(0)

</stderr_txt>
]]>

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