Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:50:27 (2663896): wrapper (7.7.26015): starting
05:50:27 (2663896): wrapper: running run_atlas (--nthreads 9)
[2025-12-11 05:50:27] Arguments: --nthreads 9
[2025-12-11 05:50:27] Threads: 9
[2025-12-11 05:50:27] Checking for CVMFS
[2025-12-11 05:50:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-11 05:50:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-11 05:50:27] Running cvmfs_config stat atlas.cern.ch
[2025-12-11 05:50:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-11 05:50:27] 2.13.2.0 2325231 52132 211492 153879 2 480 36963728 40960000 29764 16776704 0 342970723 99.635 344032129 50601 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-11 05:50:27] CVMFS is ok
[2025-12-11 05:50:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-11 05:50:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-11 05:50:27] Further information can be found at the LHC@home message board.
[2025-12-11 05:50:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-11 05:50:27] Checking for apptainer binary...
[2025-12-11 05:50:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-11 05:50:27] Running /usr/bin/apptainer --version
[2025-12-11 05:50:28] apptainer version 1.4.4-1.el9
[2025-12-11 05:50:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-11 05:50:28] c-208-37.aglt2.org
[2025-12-11 05:50:28] apptainer works
[2025-12-11 05:50:28] Set ATHENA_PROC_NUMBER=9
[2025-12-11 05:50:28] Set ATHENA_CORE_NUMBER=9
[2025-12-11 05:50:28] Starting ATLAS job with PandaID=6926673872
[2025-12-11 05:50:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-11 12:42:35]  *** The last 200 lines of the pilot log: ***
[2025-12-11 12:42:35] 2025-12-11 17:41:13,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 12:42:35] 2025-12-11 17:41:15,306 | INFO     | time since job start (24634s) is within the limit (174528.0s)
[2025-12-11 12:42:35] 2025-12-11 17:41:16,103 | INFO     | monitor loop #1533: job 0:6926673872 is in state 'finished'
[2025-12-11 12:42:35] 2025-12-11 17:41:16,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 12:42:35] 2025-12-11 17:41:17,316 | INFO     | time since job start (24636s) is within the limit (174528.0s)
[2025-12-11 12:42:35] 2025-12-11 17:41:18,608 | INFO     | monitor loop #1534: job 0:6926673872 is in state 'finished'
[2025-12-11 12:42:35] 2025-12-11 17:41:18,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 12:42:35] 2025-12-11 17:41:19,323 | INFO     | time since job start (24638s) is within the limit (174528.0s)
[2025-12-11 12:42:35] 2025-12-11 17:41:21,122 | INFO     | monitor loop #1535: job 0:6926673872 is in state 'finished'
[2025-12-11 12:42:35] 2025-12-11 17:41:21,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 12:42:35] 2025-12-11 17:41:21,356 | INFO     | time since job start (24640s) is within the limit (174528.0s)
[2025-12-11 12:42:35] 2025-12-11 17:41:23,363 | INFO     | time since job start (24642s) is within the limit (174528.0s)
[2025-12-11 12:42:35] 2025-12-11 17:41:23,628 | INFO     | monitor loop #1536: job 0:6926673872 is in state 'finished'
[2025-12-11 12:42:35] 2025-12-11 17:41:23,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 12:42:35] 2025-12-11 17:41:25,376 | INFO     | time since job start (24644s) is within the limit (174528.0s)
[2025-12-11 12:42:35] 2025-12-11 17:41:26,134 | INFO     | monitor loop #1537: job 0:6926673872 is in state 'finished'
[2025-12-11 12:42:35] 2025-12-11 17:41:26,134 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,135 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-11 12:42:35] 2025-12-11 17:41:27,144 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3752.0129453124982
[2025-12-11 12:42:35] 2025-12-11 17:41:27,165 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6926673872/memory_monitor_summary.json (trf name=prmon)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,166 | INFO     | extracted standard info from prmon json
[2025-12-11 12:42:35] 2025-12-11 17:41:27,166 | INFO     | extracted standard memory fields from prmon json
[2025-12-11 12:42:35] 2025-12-11 17:41:27,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-11 12:42:35] 2025-12-11 17:41:27,170 | INFO     | fitting pss+swap vs Time
[2025-12-11 12:42:35] 2025-12-11 17:41:27,171 | INFO     | sum of square deviations: 20290209987.444153
[2025-12-11 12:42:35] 2025-12-11 17:41:27,173 | INFO     | sum of deviations: -675805239560.2627
[2025-12-11 12:42:35] 2025-12-11 17:41:27,173 | INFO     | mean x: 1765462548.5905707
[2025-12-11 12:42:35] 2025-12-11 17:41:27,173 | INFO     | mean y: 3273953.4044665014
[2025-12-11 12:42:35] 2025-12-11 17:41:27,173 | INFO     | intersect: 58805466800.26184
[2025-12-11 12:42:35] 2025-12-11 17:41:27,173 | INFO     | chi2: 27.72383360599567
[2025-12-11 12:42:35] 2025-12-11 17:41:27,174 | INFO     | sum of square deviations: 19544458570.967396
[2025-12-11 12:42:35] 2025-12-11 17:41:27,176 | INFO     | sum of deviations: -519108676888.6256
[2025-12-11 12:42:35] 2025-12-11 17:41:27,176 | INFO     | mean x: 1765462396.1231155
[2025-12-11 12:42:35] 2025-12-11 17:41:27,176 | INFO     | mean y: 3305975.665829146
[2025-12-11 12:42:35] 2025-12-11 17:41:27,176 | INFO     | intersect: 46894696966.12654
[2025-12-11 12:42:35] 2025-12-11 17:41:27,176 | INFO     | chi2: 23.68999739332047
[2025-12-11 12:42:35] 2025-12-11 17:41:27,176 | INFO     | current chi2=23.68999739332047 (change=14.550066451859037 %)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,176 | INFO     | right removable region: 397
[2025-12-11 12:42:35] 2025-12-11 17:41:27,176 | INFO     | sum of square deviations: 19543821730.967396
[2025-12-11 12:42:35] 2025-12-11 17:41:27,179 | INFO     | sum of deviations: -803371844490.6909
[2025-12-11 12:42:35] 2025-12-11 17:41:27,179 | INFO     | mean x: 1765462701.1231155
[2025-12-11 12:42:35] 2025-12-11 17:41:27,179 | INFO     | mean y: 3299942.9120603013
[2025-12-11 12:42:35] 2025-12-11 17:41:27,179 | INFO     | intersect: 72574726663.07329
[2025-12-11 12:42:35] 2025-12-11 17:41:27,179 | INFO     | chi2: 25.479766404490068
[2025-12-11 12:42:35] 2025-12-11 17:41:27,179 | INFO     | current chi2=25.479766404490068 (change=8.094361095214083 %)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,179 | INFO     | left removable region: 10
[2025-12-11 12:42:35] 2025-12-11 17:41:27,179 | INFO     | sum of square deviations: 17967582322.976685
[2025-12-11 12:42:35] 2025-12-11 17:41:27,182 | INFO     | sum of deviations: -627718340463.8141
[2025-12-11 12:42:35] 2025-12-11 17:41:27,182 | INFO     | mean x: 1765462670.6744187
[2025-12-11 12:42:35] 2025-12-11 17:41:27,182 | INFO     | mean y: 3341289.493540052
[2025-12-11 12:42:35] 2025-12-11 17:41:27,182 | INFO     | intersect: 61681828570.9678
[2025-12-11 12:42:35] 2025-12-11 17:41:27,182 | INFO     | chi2: 20.6911236163973
[2025-12-11 12:42:35] 2025-12-11 17:41:27,182 | INFO     | current memory leak: -34.94 B/s (using 387 data points, chi2=20.69)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | could have reported an average CPU frequency of 3756 MHz (17 samples)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | ..............................
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | . Timing measurements:
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | . get job = 0 s
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | . initial setup = 2 s
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | . payload setup = 14 s
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | . stage-in = 0 s
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | . payload execution = 24563 s
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | . stage-out = 7 s
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | . log creation = 2 s
[2025-12-11 12:42:35] 2025-12-11 17:41:27,183 | INFO     | ..............................
[2025-12-11 12:42:35] 2025-12-11 17:41:27,383 | INFO     | time since job start (24646s) is within the limit (174528.0s)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,707 | INFO     | 
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | job summary report
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | --------------------------------------------------
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | PanDA job id: 6926673872
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | task id: 47866669
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | errors: (none)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | pilot state: finished 
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | transexitcode: 0
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | exeerrorcode: 0
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | exeerrordiag: 
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | exitcode: 0
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | exitmsg: OK
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | cpuconsumptiontime: 92471 s
[2025-12-11 12:42:35] 2025-12-11 17:41:27,708 | INFO     | nevents: 1000
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | neventsw: 0
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | pid: 2708113
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | pgrp: 2708113
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | corecount: 9
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | event service: False
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | sizes: {0: 2284349, 1: 2284548, 6: 2284810, 11: 2284838, 24582: 2339518, 24591: 2348696, 24624: 2348950}
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | --------------------------------------------------
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | 
[2025-12-11 12:42:35] 2025-12-11 17:41:27,709 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,773 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,773 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-11 12:42:35] 2025-12-11 17:41:27,773 | INFO     | job 6926673872 has completed (purged errors)
[2025-12-11 12:42:35] 2025-12-11 17:41:27,773 | INFO     | overall cleanup function is called
[2025-12-11 12:42:35] 2025-12-11 17:41:28,832 | INFO     | --- collectZombieJob: --- 10, [2708113]
[2025-12-11 12:42:35] 2025-12-11 17:41:28,833 | INFO     | zombie collector waiting for pid 2708113
[2025-12-11 12:42:35] 2025-12-11 17:41:28,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-11 12:42:35] 2025-12-11 17:41:28,833 | INFO     | collected zombie processes
[2025-12-11 12:42:35] 2025-12-11 17:41:28,833 | INFO     | will attempt to kill all subprocesses of pid=2708113
[2025-12-11 12:42:35] 2025-12-11 17:41:30,196 | INFO     | process IDs to be killed: [2708113] (in reverse order)
[2025-12-11 12:42:35] 2025-12-11 17:41:30,572 | WARNING  | found no corresponding commands to process id(s)
[2025-12-11 12:42:35] 2025-12-11 17:41:30,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-11 12:42:35] 2025-12-11 17:41:30,666 | INFO     | did not find any defunct processes belonging to 2708113
[2025-12-11 12:42:35] 2025-12-11 17:41:30,712 | INFO     | did not find any defunct processes belonging to 2708113
[2025-12-11 12:42:35] 2025-12-11 17:41:30,712 | INFO     | ready for new job
[2025-12-11 12:42:35] 2025-12-11 17:41:30,712 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-11 12:42:35] 2025-12-11 17:41:30,715 | INFO     | ***************************************
[2025-12-11 12:42:35] 2025-12-11 17:41:30,715 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-11 12:42:35] 2025-12-11 17:41:30,716 | INFO     | ***************************************
[2025-12-11 12:42:35] 2025-12-11 17:41:30,716 | INFO     | 
[2025-12-11 12:42:35] 2025-12-11 17:41:30,730 | INFO     | architecture information:
[2025-12-11 12:42:35] 2025-12-11 17:41:30,743 | INFO     | executing command: cat /etc/os-release
[2025-12-11 12:42:35] 2025-12-11 17:41:30,862 | INFO     | cat /etc/os-release:
[2025-12-11 12:42:35] NAME="CentOS Linux"
[2025-12-11 12:42:35] VERSION="7 (Core)"
[2025-12-11 12:42:35] ID="centos"
[2025-12-11 12:42:35] ID_LIKE="rhel fedora"
[2025-12-11 12:42:35] VERSION_ID="7"
[2025-12-11 12:42:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-11 12:42:35] ANSI_COLOR="0;31"
[2025-12-11 12:42:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-11 12:42:35] HOME_URL="https://www.centos.org/"
[2025-12-11 12:42:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-11 12:42:35] 
[2025-12-11 12:42:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-11 12:42:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-11 12:42:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-11 12:42:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-11 12:42:35] 
[2025-12-11 12:42:35] 2025-12-11 17:41:30,862 | INFO     | ***************************************
[2025-12-11 12:42:35] 2025-12-11 17:41:31,372 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-12-11 12:42:35] 2025-12-11 17:41:31,536 | INFO     | sufficient remaining disk space (166290522112 B)
[2025-12-11 12:42:35] 2025-12-11 17:41:31,536 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-11 12:42:35] 2025-12-11 17:41:31,536 | INFO     | current server update state: UPDATING_FINAL
[2025-12-11 12:42:35] 2025-12-11 17:41:31,536 | INFO     | update_server=False
[2025-12-11 12:42:35] 2025-12-11 17:41:31,536 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-11 12:42:35] 2025-12-11 17:41:31,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-11 12:42:35] 2025-12-11 17:41:31,964 | INFO     | all job control threads have been joined
[2025-12-11 12:42:35] 2025-12-11 17:41:32,147 | INFO     | all payload control threads have been joined
[2025-12-11 12:42:35] 2025-12-11 17:41:32,151 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-11 12:42:35] 2025-12-11 17:41:32,154 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-11 12:42:35] 2025-12-11 17:41:32,155 | INFO     | aborting loop
[2025-12-11 12:42:35] 2025-12-11 17:41:32,335 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-11 12:42:35] 2025-12-11 17:41:32,367 | INFO     | all data control threads have been joined
[2025-12-11 12:42:35] 2025-12-11 17:41:32,559 | INFO     | [job] retrieve thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:32,982 | INFO     | [job] control thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,154 | INFO     | [payload] control thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,161 | INFO     | [job] job monitor thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,169 | INFO     | [job] create_data_payload thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,172 | INFO     | [payload] validate_pre thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,173 | INFO     | [data] copytool_in thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,342 | INFO     | [job] queue monitor thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,374 | INFO     | [data] control thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,428 | INFO     | [payload] failed_post thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,429 | INFO     | [payload] validate_post thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,490 | INFO     | [payload] execute_payloads thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:33,662 | INFO     | [job] validate thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:34,006 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:34,159 | INFO     | [data] copytool_out thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:41:35,805 | INFO     | [data] queue_monitor thread has finished
[2025-12-11 12:42:35] 2025-12-11 17:42:01,641 | INFO     | PID=2672048 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-11 12:42:35] 2025-12-11 17:42:01,642 | INFO     | .. there are 30 such processes running
[2025-12-11 12:42:35] 2025-12-11 17:42:01,650 | INFO     | found 0 job(s) in 20 queues
[2025-12-11 12:42:35] 2025-12-11 17:42:01,651 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-11 12:42:35] 2025-12-11 17:42:01,651 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-11 12:42:35] 2025-12-11 17:42:23,142 | INFO     | [monitor] cgroup control has ended
[2025-12-11 12:42:35] 2025-12-11 17:42:25,174 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140544644417344)>', '<ExcThread(monitor, started 140544363693824)>']
[2025-12-11 12:42:35] 2025-12-11 17:42:25,829 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-11 12:42:35] 2025-12-11 17:42:25,830 | INFO     | [monitor] control thread has ended
[2025-12-11 12:42:35] 2025-12-11 17:42:30,199 | INFO     | all workflow threads have been joined
[2025-12-11 12:42:35] 2025-12-11 17:42:30,200 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-11 12:42:35] 2025-12-11 17:42:30,200 | INFO     | traces error code: 0
[2025-12-11 12:42:35] 2025-12-11 17:42:30,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-11 12:42:35] 2025-12-11 17:42:34,306 [wrapper] ==== pilot stdout END ====
[2025-12-11 12:42:35] 2025-12-11 17:42:34,333 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-11 12:42:35] 2025-12-11 17:42:34,373 [wrapper] pilotpid: 2672048
[2025-12-11 12:42:35] 2025-12-11 17:42:34,393 [wrapper] Pilot exit status: 0
[2025-12-11 12:42:35] 2025-12-11 17:42:34,482 [wrapper] pandaids: 6926673872
[2025-12-11 12:42:35] 2025-12-11 17:42:34,660 [wrapper] cleanup supervisor_pilot 3982293 2672049
[2025-12-11 12:42:35] 2025-12-11 17:42:34,679 [wrapper] Test setup, not cleaning
[2025-12-11 12:42:35] 2025-12-11 17:42:34,706 [wrapper] apfmon messages muted
[2025-12-11 12:42:35] 2025-12-11 17:42:34,762 [wrapper] ==== wrapper stdout END ====
[2025-12-11 12:42:35] 2025-12-11 17:42:34,782 [wrapper] ==== wrapper stderr END ====
[2025-12-11 12:42:35]  *** Error codes and diagnostics ***
[2025-12-11 12:42:35]     "exeErrorCode": 0,
[2025-12-11 12:42:35]     "exeErrorDiag": "",
[2025-12-11 12:42:35]     "pilotErrorCode": 0,
[2025-12-11 12:42:35]     "pilotErrorDiag": "",
[2025-12-11 12:42:35]  *** Listing of results directory ***
[2025-12-11 12:42:35] total 916872
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas    579449 Dec 11 05:18 pilot3.tar.gz
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas      5112 Dec 11 05:22 queuedata.json
[2025-12-11 12:42:35] -rwx------. 1 boincer umatlas     36292 Dec 11 05:22 runpilot2-wrapper.sh
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas       100 Dec 11 05:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-11 12:42:35] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 11 05:50 run_atlas
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas       105 Dec 11 05:50 job.xml
[2025-12-11 12:42:35] -rw-r--r--. 2 boincer umatlas 327999994 Dec 11 05:50 EVNT.47866667._000002.pool.root.1
[2025-12-11 12:42:35] -rw-r--r--. 2 boincer umatlas     15847 Dec 11 05:50 start_atlas.sh
[2025-12-11 12:42:35] drwxrwx--x. 2 boincer umatlas      4096 Dec 11 05:50 shared
[2025-12-11 12:42:35] -rw-r--r--. 2 boincer umatlas    592575 Dec 11 05:50 input.tar.gz
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas         0 Dec 11 05:50 boinc_lockfile
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas      2820 Dec 11 05:50 pandaJob.out
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas        57 Dec 11 05:50 setup.sh.local
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas    991371 Dec 11 05:50 agis_schedconf.cvmfs.json
[2025-12-11 12:42:35] drwx------. 5 boincer umatlas      4096 Dec 11 05:50 pilot3
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas       532 Dec 11 12:05 boinc_task_state.xml
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas 596763065 Dec 11 12:39 HITS.47866669._000077.pool.root.1
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas      7175 Dec 11 12:40 init_data.xml
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas      1070 Dec 11 12:40 memory_monitor_summary.json
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas   1516240 Dec 11 12:40 agis_ddmendpoints.agis.ALL.json
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas   1878068 Dec 11 12:40 log.47866669._000077.job.log.tgz.1
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas     27233 Dec 11 12:41 heartbeat.json
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas        95 Dec 11 12:42 pilot_heartbeat.json
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas      4825 Dec 11 12:42 pilotlog.txt
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas   3195225 Dec 11 12:42 log.47866669._000077.job.log.1
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas       353 Dec 11 12:42 output.list
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas      8192 Dec 11 12:42 boinc_mmap_file
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas        28 Dec 11 12:42 wrapper_checkpoint.txt
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas       620 Dec 11 12:42 runtime_log
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas   5109760 Dec 11 12:42 result.tar.gz
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas       665 Dec 11 12:42 rxCMDmyzsn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCgQKDm3KDuBo.diag
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas      9343 Dec 11 12:42 runtime_log.err
[2025-12-11 12:42:35] -rw-r--r--. 1 boincer umatlas     21676 Dec 11 12:42 stderr.txt
[2025-12-11 12:42:35] HITS file was successfully produced:
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas 596763065 Dec 11 12:39 shared/HITS.pool.root.1
[2025-12-11 12:42:35]  *** Contents of shared directory: ***
[2025-12-11 12:42:35] total 908692
[2025-12-11 12:42:35] -rw-r--r--. 2 boincer umatlas 327999994 Dec 11 05:50 ATLAS.root_0
[2025-12-11 12:42:35] -rw-r--r--. 2 boincer umatlas     15847 Dec 11 05:50 start_atlas.sh
[2025-12-11 12:42:35] -rw-r--r--. 2 boincer umatlas    592575 Dec 11 05:50 input.tar.gz
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas 596763065 Dec 11 12:39 HITS.pool.root.1
[2025-12-11 12:42:35] -rw-------. 1 boincer umatlas   5109760 Dec 11 12:42 result.tar.gz
12:42:57 (2663896): run_atlas exited; CPU time 92669.305637
12:42:57 (2663896): called boinc_finish(0)

</stderr_txt>
]]>

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