Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:33:42 (2831942): wrapper (7.7.26015): starting
18:33:42 (2831942): wrapper: running run_atlas (--nthreads 4)
[2025-12-14 18:33:42] Arguments: --nthreads 4
[2025-12-14 18:33:42] Threads: 4
[2025-12-14 18:33:42] Checking for CVMFS
[2025-12-14 18:33:42] No cvmfs_config command found, will try listing directly
[2025-12-14 18:33:42] CVMFS is ok
[2025-12-14 18:33:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 18:33:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 18:33:43] Further information can be found at the LHC@home message board.
[2025-12-14 18:33:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 18:33:43] Checking for apptainer binary...
[2025-12-14 18:33:43] which: no apptainer in ((null))
[2025-12-14 18:33:43] apptainer is not installed, using version from CVMFS
[2025-12-14 18:33:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 18:33:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut06.grid.cesnet.cz
[2025-12-14 18:33:43] apptainer works
[2025-12-14 18:33:43] Set ATHENA_PROC_NUMBER=4
[2025-12-14 18:33:43] Set ATHENA_CORE_NUMBER=4
[2025-12-14 18:33:43] Starting ATLAS job with PandaID=6926682975
[2025-12-14 18:33:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 06:09:27]  *** The last 200 lines of the pilot log: ***
[2025-12-15 06:09:27] 2025-12-15 04:43:06,626 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,668 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-15 06:09:27] 2025-12-15 04:43:06,677 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2571.559609375
[2025-12-15 06:09:27] 2025-12-15 04:43:06,689 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6926682975/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,690 | INFO     | extracted standard info from prmon json
[2025-12-15 06:09:27] 2025-12-15 04:43:06,690 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 06:09:27] 2025-12-15 04:43:06,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 06:09:27] 2025-12-15 04:43:06,702 | INFO     | fitting pss+swap vs Time
[2025-12-15 06:09:27] 2025-12-15 04:43:06,703 | INFO     | sum of square deviations: 88339514338.37677
[2025-12-15 06:09:27] 2025-12-15 04:43:06,712 | INFO     | sum of deviations: 246239843260.93665
[2025-12-15 06:09:27] 2025-12-15 04:43:06,712 | INFO     | mean x: 1765753706.5136778
[2025-12-15 06:09:27] 2025-12-15 04:43:06,712 | INFO     | mean y: 2667370.340425532
[2025-12-15 06:09:27] 2025-12-15 04:43:06,712 | INFO     | intersect: -4919240104.313406
[2025-12-15 06:09:27] 2025-12-15 04:43:06,713 | INFO     | chi2: 4.928541712159694
[2025-12-15 06:09:27] 2025-12-15 04:43:06,714 | INFO     | sum of square deviations: 86340958680.87624
[2025-12-15 06:09:27] 2025-12-15 04:43:06,723 | INFO     | sum of deviations: 418689702224.9066
[2025-12-15 06:09:27] 2025-12-15 04:43:06,723 | INFO     | mean x: 1765753554.0137825
[2025-12-15 06:09:27] 2025-12-15 04:43:06,723 | INFO     | mean y: 2680517.45482389
[2025-12-15 06:09:27] 2025-12-15 04:43:06,723 | INFO     | intersect: -8559916435.691473
[2025-12-15 06:09:27] 2025-12-15 04:43:06,724 | INFO     | chi2: 2.297697723890859
[2025-12-15 06:09:27] 2025-12-15 04:43:06,724 | INFO     | current chi2=2.297697723890859 (change=53.37976508909357 %)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,725 | INFO     | sum of square deviations: 84372775685.87483
[2025-12-15 06:09:27] 2025-12-15 04:43:06,734 | INFO     | sum of deviations: 416697577800.70874
[2025-12-15 06:09:27] 2025-12-15 04:43:06,734 | INFO     | mean x: 1765753401.5138888
[2025-12-15 06:09:27] 2025-12-15 04:43:06,734 | INFO     | mean y: 2680361.199074074
[2025-12-15 06:09:27] 2025-12-15 04:43:06,734 | INFO     | intersect: -8717966309.755245
[2025-12-15 06:09:27] 2025-12-15 04:43:06,735 | INFO     | chi2: 2.2915129950076683
[2025-12-15 06:09:27] 2025-12-15 04:43:06,735 | INFO     | current chi2=2.2915129950076683 (change=0.26917069285849443 %)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,735 | INFO     | right removable region: 647
[2025-12-15 06:09:27] 2025-12-15 04:43:06,736 | INFO     | sum of square deviations: 86340953190.87625
[2025-12-15 06:09:27] 2025-12-15 04:43:06,744 | INFO     | sum of deviations: 93937961423.8561
[2025-12-15 06:09:27] 2025-12-15 04:43:06,745 | INFO     | mean x: 1765753859.0137825
[2025-12-15 06:09:27] 2025-12-15 04:43:06,745 | INFO     | mean y: 2678962.1271056663
[2025-12-15 06:09:27] 2025-12-15 04:43:06,745 | INFO     | intersect: -1918440874.5437448
[2025-12-15 06:09:27] 2025-12-15 04:43:06,746 | INFO     | chi2: 2.756882324559254
[2025-12-15 06:09:27] 2025-12-15 04:43:06,746 | INFO     | current chi2=2.756882324559254 (change=44.062919914881185 %)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,747 | INFO     | sum of square deviations: 84372764705.87483
[2025-12-15 06:09:27] 2025-12-15 04:43:06,755 | INFO     | sum of deviations: 88612367335.01376
[2025-12-15 06:09:27] 2025-12-15 04:43:06,756 | INFO     | mean x: 1765754011.5138888
[2025-12-15 06:09:27] 2025-12-15 04:43:06,756 | INFO     | mean y: 2679373.0540123456
[2025-12-15 06:09:27] 2025-12-15 04:43:06,756 | INFO     | intersect: -1851801082.0666916
[2025-12-15 06:09:27] 2025-12-15 04:43:06,757 | INFO     | chi2: 2.755111377832563
[2025-12-15 06:09:27] 2025-12-15 04:43:06,757 | INFO     | current chi2=2.755111377832563 (change=0.06423729844814602 %)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,757 | INFO     | left removable region: 20
[2025-12-15 06:09:27] 2025-12-15 04:43:06,758 | INFO     | sum of square deviations: 76432806150.87093
[2025-12-15 06:09:27] 2025-12-15 04:43:06,766 | INFO     | sum of deviations: 261164575884.1626
[2025-12-15 06:09:27] 2025-12-15 04:43:06,766 | INFO     | mean x: 1765753981.014354
[2025-12-15 06:09:27] 2025-12-15 04:43:06,766 | INFO     | mean y: 2692401.2041467302
[2025-12-15 06:09:27] 2025-12-15 04:43:06,766 | INFO     | intersect: -6030742883.863309
[2025-12-15 06:09:27] 2025-12-15 04:43:06,767 | INFO     | chi2: 0.07769812907324476
[2025-12-15 06:09:27] 2025-12-15 04:43:06,767 | INFO     | current memory leak: 3.42 B/s (using 627 data points, chi2=0.08)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,768 | INFO     | could have reported an average CPU frequency of 2587 MHz (26 samples)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,768 | INFO     | ..............................
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | . Timing measurements:
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | . get job = 0 s
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | . initial setup = 1 s
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | . payload setup = 11 s
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | . stage-in = 0 s
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | . payload execution = 40113 s
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | . stage-out = 2 s
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | . log creation = 0 s
[2025-12-15 06:09:27] 2025-12-15 04:43:06,769 | INFO     | ..............................
[2025-12-15 06:09:27] 2025-12-15 04:43:06,868 | INFO     | 
[2025-12-15 06:09:27] 2025-12-15 04:43:06,868 | INFO     | job summary report
[2025-12-15 06:09:27] 2025-12-15 04:43:06,868 | INFO     | --------------------------------------------------
[2025-12-15 06:09:27] 2025-12-15 04:43:06,868 | INFO     | PanDA job id: 6926682975
[2025-12-15 06:09:27] 2025-12-15 04:43:06,868 | INFO     | task id: 47866687
[2025-12-15 06:09:27] 2025-12-15 04:43:06,868 | INFO     | errors: (none)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | pilot state: finished 
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | transexitcode: 0
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | exeerrorcode: 0
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | exeerrordiag: 
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | exitcode: 0
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | exitmsg: OK
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | cpuconsumptiontime: 157825 s
[2025-12-15 06:09:27] 2025-12-15 04:43:06,869 | INFO     | nevents: 1000
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | neventsw: 0
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | pid: 2843293
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | pgrp: 2843293
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | corecount: 4
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | event service: False
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | sizes: {0: 2284399, 1: 2284598, 5: 2284860, 12: 2284916, 40128: 2347098, 40131: 2356298, 40136: 2356488}
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | --------------------------------------------------
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | 
[2025-12-15 06:09:27] 2025-12-15 04:43:06,870 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-12-15 06:09:27] 2025-12-15 04:43:06,893 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,895 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 06:09:27] 2025-12-15 04:43:06,896 | INFO     | job 6926682975 has completed (purged errors)
[2025-12-15 06:09:27] 2025-12-15 04:43:06,896 | INFO     | overall cleanup function is called
[2025-12-15 06:09:27] 2025-12-15 04:43:07,911 | INFO     | --- collectZombieJob: --- 10, [2843293]
[2025-12-15 06:09:27] 2025-12-15 04:43:07,911 | INFO     | zombie collector waiting for pid 2843293
[2025-12-15 06:09:27] 2025-12-15 04:43:07,911 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 06:09:27] 2025-12-15 04:43:07,911 | INFO     | collected zombie processes
[2025-12-15 06:09:27] 2025-12-15 04:43:07,911 | INFO     | will attempt to kill all subprocesses of pid=2843293
[2025-12-15 06:09:27] 2025-12-15 04:43:08,327 | INFO     | process IDs to be killed: [2843293] (in reverse order)
[2025-12-15 06:09:27] 2025-12-15 04:43:08,443 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 06:09:27] 2025-12-15 04:43:08,444 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 06:09:27] 2025-12-15 04:43:08,458 | INFO     | did not find any defunct processes belonging to 2843293
[2025-12-15 06:09:27] 2025-12-15 04:43:08,471 | INFO     | did not find any defunct processes belonging to 2843293
[2025-12-15 06:09:27] 2025-12-15 04:43:08,472 | INFO     | ready for new job
[2025-12-15 06:09:27] 2025-12-15 04:43:08,472 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 06:09:27] 2025-12-15 04:43:08,476 | INFO     | ***************************************
[2025-12-15 06:09:27] 2025-12-15 04:43:08,476 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 06:09:27] 2025-12-15 04:43:08,476 | INFO     | ***************************************
[2025-12-15 06:09:27] 2025-12-15 04:43:08,477 | INFO     | 
[2025-12-15 06:09:27] 2025-12-15 04:43:08,481 | INFO     | architecture information:
[2025-12-15 06:09:27] 2025-12-15 04:43:08,482 | INFO     | executing command: cat /etc/os-release
[2025-12-15 06:09:27] 2025-12-15 04:43:08,498 | INFO     | cat /etc/os-release:
[2025-12-15 06:09:27] NAME="CentOS Linux"
[2025-12-15 06:09:27] VERSION="7 (Core)"
[2025-12-15 06:09:27] ID="centos"
[2025-12-15 06:09:27] ID_LIKE="rhel fedora"
[2025-12-15 06:09:27] VERSION_ID="7"
[2025-12-15 06:09:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 06:09:27] ANSI_COLOR="0;31"
[2025-12-15 06:09:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 06:09:27] HOME_URL="https://www.centos.org/"
[2025-12-15 06:09:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 06:09:27] 
[2025-12-15 06:09:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 06:09:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 06:09:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 06:09:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 06:09:27] 
[2025-12-15 06:09:27] 2025-12-15 04:43:08,498 | INFO     | ***************************************
[2025-12-15 06:09:27] 2025-12-15 04:43:09,001 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-12-15 06:09:27] 2025-12-15 04:43:09,019 | INFO     | sufficient remaining disk space (659255459840 B)
[2025-12-15 06:09:27] 2025-12-15 04:43:09,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 06:09:27] 2025-12-15 04:43:09,020 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 06:09:27] 2025-12-15 04:43:09,020 | INFO     | update_server=False
[2025-12-15 06:09:27] 2025-12-15 04:43:09,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 06:09:27] 2025-12-15 04:43:09,020 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 06:09:27] 2025-12-15 04:43:09,080 | INFO     | all job control threads have been joined
[2025-12-15 06:09:27] 2025-12-15 04:43:09,128 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 06:09:27] 2025-12-15 04:43:09,129 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 06:09:27] 2025-12-15 04:43:09,129 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 06:09:27] 2025-12-15 04:43:09,129 | INFO     | will abort loop
[2025-12-15 06:09:27] 2025-12-15 04:43:09,166 | INFO     | all data control threads have been joined
[2025-12-15 06:09:27] 2025-12-15 04:43:09,399 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 06:09:27] 2025-12-15 04:43:09,597 | INFO     | all payload control threads have been joined
[2025-12-15 06:09:27] 2025-12-15 04:43:10,020 | INFO     | [job] retrieve thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:10,085 | INFO     | [job] control thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:10,135 | INFO     | [job] job monitor thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:10,173 | INFO     | [data] control thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:10,602 | INFO     | [payload] control thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:10,692 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:10,757 | INFO     | [data] copytool_in thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:10,757 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:11,252 | INFO     | [job] validate thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:11,396 | INFO     | [payload] failed_post thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:11,405 | INFO     | [data] copytool_out thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:11,444 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:11,488 | INFO     | [payload] validate_post thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:11,879 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 06:09:27] 2025-12-15 04:43:12,885 | INFO     | [job] queue monitor thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:13,024 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:19,903 | INFO     | job.realtimelogging is not enabled
[2025-12-15 06:09:27] 2025-12-15 04:43:20,909 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 06:09:27] 2025-12-15 04:43:38,851 | INFO     | PID=2835697 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 06:09:27] 2025-12-15 04:43:38,851 | INFO     | .. there are 5 such processes running
[2025-12-15 06:09:27] 2025-12-15 04:43:38,851 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 06:09:27] 2025-12-15 04:43:38,852 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 06:09:27] 2025-12-15 04:43:38,852 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 06:09:27] 2025-12-15 04:44:01,013 | INFO     | [monitor] cgroup control has ended
[2025-12-15 06:09:27] 2025-12-15 04:44:02,295 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22705316865856)>', '<ExcThread(monitor, started 22704602208000)>']
[2025-12-15 06:09:27] 2025-12-15 04:44:02,965 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 06:09:27] 2025-12-15 04:44:02,965 | INFO     | [monitor] control thread has ended
[2025-12-15 06:09:27] 2025-12-15 04:44:07,319 | INFO     | all workflow threads have been joined
[2025-12-15 06:09:27] 2025-12-15 04:44:07,320 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 06:09:27] 2025-12-15 04:44:07,320 | INFO     | traces error code: 0
[2025-12-15 06:09:27] 2025-12-15 04:44:07,320 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 06:09:27] 2025-12-15 04:44:07,512 [wrapper] ==== pilot stdout END ====
[2025-12-15 06:09:27] 2025-12-15 04:44:07,515 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 06:09:27] 2025-12-15 04:44:07,518 [wrapper] pilotpid: 2835697
[2025-12-15 06:09:27] 2025-12-15 04:44:07,520 [wrapper] Pilot exit status: 0
[2025-12-15 06:09:27] 2025-12-15 04:44:07,531 [wrapper] pandaids: 6926682975
[2025-12-15 06:09:27] 2025-12-15 04:44:07,612 [wrapper] cleanup supervisor_pilot 3597454 2835698
[2025-12-15 06:09:27] 2025-12-15 04:44:07,615 [wrapper] Test setup, not cleaning
[2025-12-15 06:09:27] 2025-12-15 04:44:07,618 [wrapper] apfmon messages muted
[2025-12-15 06:09:27] 2025-12-15 04:44:07,621 [wrapper] ==== wrapper stdout END ====
[2025-12-15 06:09:27] 2025-12-15 04:44:07,624 [wrapper] ==== wrapper stderr END ====
[2025-12-15 06:09:27]  *** Error codes and diagnostics ***
[2025-12-15 06:09:27]     "exeErrorCode": 0,
[2025-12-15 06:09:27]     "exeErrorDiag": "",
[2025-12-15 06:09:27]     "pilotErrorCode": 0,
[2025-12-15 06:09:27]     "pilotErrorDiag": "",
[2025-12-15 06:09:27]  *** Listing of results directory ***
[2025-12-15 06:09:27] total 927532
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc    579449 Dec 11 11:23 pilot3.tar.gz
[2025-12-15 06:09:27] -rwx------ 1 boinc boinc     36292 Dec 11 11:40 runpilot2-wrapper.sh
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc      5112 Dec 11 11:40 queuedata.json
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc       100 Dec 14 18:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 06:09:27] -rwxr-xr-x 1 boinc boinc      7986 Dec 14 18:33 run_atlas
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc       105 Dec 14 18:33 job.xml
[2025-12-15 06:09:27] -rw-r--r-- 2 boinc boinc 328748758 Dec 14 18:33 EVNT.47866683._000049.pool.root.1
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc      6638 Dec 14 18:33 init_data.xml
[2025-12-15 06:09:27] -rw-r--r-- 2 boinc boinc     15847 Dec 14 18:33 start_atlas.sh
[2025-12-15 06:09:27] drwxrwx--x 2 boinc boinc      4096 Dec 14 18:33 shared
[2025-12-15 06:09:27] -rw-r--r-- 2 boinc boinc    592586 Dec 14 18:33 input.tar.gz
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc         0 Dec 14 18:33 boinc_lockfile
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc      2847 Dec 14 18:33 pandaJob.out
[2025-12-15 06:09:27] -rw------- 1 boinc boinc    991024 Dec 14 18:33 agis_schedconf.cvmfs.json
[2025-12-15 06:09:27] drwx------ 5 boinc boinc      4096 Dec 14 18:33 pilot3
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc       531 Dec 15 05:37 boinc_task_state.xml
[2025-12-15 06:09:27] -rw------- 1 boinc boinc 602774660 Dec 15 05:42 HITS.47866687._000489.pool.root.1
[2025-12-15 06:09:27] -rw------- 1 boinc boinc        95 Dec 15 05:42 pilot_heartbeat.json
[2025-12-15 06:09:27] -rw------- 1 boinc boinc      1044 Dec 15 05:42 memory_monitor_summary.json
[2025-12-15 06:09:27] -rw------- 1 boinc boinc   1516240 Dec 15 05:43 agis_ddmendpoints.agis.ALL.json
[2025-12-15 06:09:27] -rw------- 1 boinc boinc   1538401 Dec 15 05:43 log.47866687._000489.job.log.tgz.1
[2025-12-15 06:09:27] -rw------- 1 boinc boinc     27706 Dec 15 05:43 heartbeat.json
[2025-12-15 06:09:27] -rw------- 1 boinc boinc      5091 Dec 15 05:44 pilotlog.txt
[2025-12-15 06:09:27] -rw------- 1 boinc boinc   5618695 Dec 15 05:44 log.47866687._000489.job.log.1
[2025-12-15 06:09:27] -rw------- 1 boinc boinc       353 Dec 15 05:44 output.list
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc       620 Dec 15 05:44 runtime_log
[2025-12-15 06:09:27] -rw------- 1 boinc boinc   7198720 Dec 15 05:44 result.tar.gz
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc      9206 Dec 15 05:44 runtime_log.err
[2025-12-15 06:09:27] -rw------- 1 boinc boinc       669 Dec 15 05:44 fiMLDmiGtn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWmQKDmDSt8Vo.diag
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc        28 Dec 15 06:09 wrapper_checkpoint.txt
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc      8192 Dec 15 06:09 boinc_mmap_file
[2025-12-15 06:09:27] -rw-r--r-- 1 boinc boinc     20962 Dec 15 06:09 stderr.txt
[2025-12-15 06:09:27] HITS file was successfully produced:
[2025-12-15 06:09:27] -rw------- 1 boinc boinc 602774660 Dec 15 05:42 shared/HITS.pool.root.1
[2025-12-15 06:09:27]  *** Contents of shared directory: ***
[2025-12-15 06:09:27] total 917328
[2025-12-15 06:09:27] -rw-r--r-- 2 boinc boinc 328748758 Dec 14 18:33 ATLAS.root_0
[2025-12-15 06:09:27] -rw-r--r-- 2 boinc boinc     15847 Dec 14 18:33 start_atlas.sh
[2025-12-15 06:09:27] -rw-r--r-- 2 boinc boinc    592586 Dec 14 18:33 input.tar.gz
[2025-12-15 06:09:27] -rw------- 1 boinc boinc 602774660 Dec 15 05:42 HITS.pool.root.1
[2025-12-15 06:09:27] -rw------- 1 boinc boinc   7198720 Dec 15 05:44 result.tar.gz
06:09:29 (2831942): run_atlas exited; CPU time 159467.628632
06:09:29 (2831942): called boinc_finish(0)

</stderr_txt>
]]>

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