Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
05:37:19 (21964): wrapper (7.7.26015): starting
05:37:19 (21964): wrapper: running run_atlas (--nthreads 12)
[2025-12-11 05:37:19] Arguments: --nthreads 12
[2025-12-11 05:37:19] Threads: 12
[2025-12-11 05:37:19] Checking for CVMFS
[2025-12-11 05:37:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-11 05:37:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-11 05:37:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-11 05:37:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-11 05:37:19] 2.11.2.0 2998 124884 103236 153879 0 1 10380638 20275200 1 130560 0 51554541 99.957 5437040 36657 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-11 05:37:19] CVMFS is ok
[2025-12-11 05:37:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-11 05:37:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-11 05:37:19] Further information can be found at the LHC@home message board.
[2025-12-11 05:37:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-11 05:37:19] Checking for apptainer binary...
[2025-12-11 05:37:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-11 05:37:19] Running /usr/bin/apptainer --version
[2025-12-11 05:37:19] apptainer version 1.3.2-1.el7
[2025-12-11 05:37:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-11 05:37:21] c-205-12.aglt2.org
[2025-12-11 05:37:21] apptainer works
[2025-12-11 05:37:21] Set ATHENA_PROC_NUMBER=12
[2025-12-11 05:37:21] Set ATHENA_CORE_NUMBER=12
[2025-12-11 05:37:21] Starting ATLAS job with PandaID=6926682518
[2025-12-11 05:37:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-11 10:11:25]  *** The last 200 lines of the pilot log: ***
[2025-12-11 10:11:25] 2025-12-11 15:10:50,251 | INFO     | time since job start (16393s) is within the limit (174528.0s)
[2025-12-11 10:11:25] 2025-12-11 15:10:50,677 | INFO     | monitor loop #1228: job 0:6926682518 is in state 'finished'
[2025-12-11 10:11:25] 2025-12-11 15:10:50,677 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-11 10:11:25] 2025-12-11 15:10:52,256 | INFO     | time since job start (16395s) is within the limit (174528.0s)
[2025-12-11 10:11:25] 2025-12-11 15:10:52,992 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-11 10:11:25] 2025-12-11 15:10:52,995 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1718.0
[2025-12-11 10:11:25] 2025-12-11 15:10:52,996 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6926682518/memory_monitor_summary.json (trf name=prmon)
[2025-12-11 10:11:25] 2025-12-11 15:10:52,997 | INFO     | extracted standard info from prmon json
[2025-12-11 10:11:25] 2025-12-11 15:10:52,997 | INFO     | extracted standard memory fields from prmon json
[2025-12-11 10:11:25] 2025-12-11 15:10:52,997 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-11 10:11:25] 2025-12-11 15:10:53,001 | INFO     | fitting pss+swap vs Time
[2025-12-11 10:11:25] 2025-12-11 15:10:53,002 | INFO     | sum of square deviations: 5968653756.876883
[2025-12-11 10:11:25] 2025-12-11 15:10:53,004 | INFO     | sum of deviations: 155148553040.68677
[2025-12-11 10:11:25] 2025-12-11 15:10:53,004 | INFO     | mean x: 1765457636.7873135
[2025-12-11 10:11:25] 2025-12-11 15:10:53,004 | INFO     | mean y: 4272266.731343283
[2025-12-11 10:11:25] 2025-12-11 15:10:53,004 | INFO     | intersect: -45886846394.08797
[2025-12-11 10:11:25] 2025-12-11 15:10:53,004 | INFO     | chi2: 5.773798709845217
[2025-12-11 10:11:25] 2025-12-11 15:10:53,005 | INFO     | sum of square deviations: 5640801326.456287
[2025-12-11 10:11:25] 2025-12-11 15:10:53,006 | INFO     | sum of deviations: 278176002963.4561
[2025-12-11 10:11:25] 2025-12-11 15:10:53,007 | INFO     | mean x: 1765457484.2927756
[2025-12-11 10:11:25] 2025-12-11 15:10:53,007 | INFO     | mean y: 4329317.292775665
[2025-12-11 10:11:25] 2025-12-11 15:10:53,007 | INFO     | intersect: -87059170699.82465
[2025-12-11 10:11:25] 2025-12-11 15:10:53,007 | INFO     | chi2: 2.797036592174704
[2025-12-11 10:11:25] 2025-12-11 15:10:53,007 | INFO     | current chi2=2.797036592174704 (change=51.556388908998066 %)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,008 | INFO     | sum of square deviations: 5325165762.112412
[2025-12-11 10:11:25] 2025-12-11 15:10:53,009 | INFO     | sum of deviations: 282478546533.45374
[2025-12-11 10:11:25] 2025-12-11 15:10:53,009 | INFO     | mean x: 1765457331.7945735
[2025-12-11 10:11:25] 2025-12-11 15:10:53,009 | INFO     | mean y: 4331311.895348838
[2025-12-11 10:11:25] 2025-12-11 15:10:53,010 | INFO     | intersect: -93646053170.09535
[2025-12-11 10:11:25] 2025-12-11 15:10:53,010 | INFO     | chi2: 2.709030741379071
[2025-12-11 10:11:25] 2025-12-11 15:10:53,010 | INFO     | current chi2=2.709030741379071 (change=3.146396119444692 %)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,010 | INFO     | right removable region: 257
[2025-12-11 10:11:25] 2025-12-11 15:10:53,011 | INFO     | sum of square deviations: 5640754356.456287
[2025-12-11 10:11:25] 2025-12-11 15:10:53,012 | INFO     | sum of deviations: 38040427384.59691
[2025-12-11 10:11:25] 2025-12-11 15:10:53,012 | INFO     | mean x: 1765457789.2927756
[2025-12-11 10:11:25] 2025-12-11 15:10:53,012 | INFO     | mean y: 4326506.5247148285
[2025-12-11 10:11:25] 2025-12-11 15:10:53,013 | INFO     | intersect: -11901664180.216381
[2025-12-11 10:11:25] 2025-12-11 15:10:53,013 | INFO     | chi2: 3.187592928658613
[2025-12-11 10:11:25] 2025-12-11 15:10:53,013 | INFO     | current chi2=3.187592928658613 (change=44.79210154619218 %)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,013 | INFO     | sum of square deviations: 5325087743.519406
[2025-12-11 10:11:25] 2025-12-11 15:10:53,015 | INFO     | sum of deviations: 22341476459.58135
[2025-12-11 10:11:25] 2025-12-11 15:10:53,015 | INFO     | mean x: 1765457941.7984495
[2025-12-11 10:11:25] 2025-12-11 15:10:53,015 | INFO     | mean y: 4334065.953488372
[2025-12-11 10:11:25] 2025-12-11 15:10:53,015 | INFO     | intersect: -7402668212.0977545
[2025-12-11 10:11:25] 2025-12-11 15:10:53,016 | INFO     | chi2: 3.1674110181409816
[2025-12-11 10:11:25] 2025-12-11 15:10:53,016 | INFO     | current chi2=3.1674110181409816 (change=0.6331395184178793 %)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,016 | INFO     | left removable region: 20
[2025-12-11 10:11:25] 2025-12-11 15:10:53,016 | INFO     | sum of square deviations: 4127740486.126588
[2025-12-11 10:11:25] 2025-12-11 15:10:53,018 | INFO     | sum of deviations: 126384221017.9747
[2025-12-11 10:11:25] 2025-12-11 15:10:53,018 | INFO     | mean x: 1765457911.3037975
[2025-12-11 10:11:25] 2025-12-11 15:10:53,018 | INFO     | mean y: 4409725.47257384
[2025-12-11 10:11:25] 2025-12-11 15:10:53,018 | INFO     | intersect: -54050835174.26902
[2025-12-11 10:11:25] 2025-12-11 15:10:53,018 | INFO     | chi2: 0.013810944884819269
[2025-12-11 10:11:25] 2025-12-11 15:10:53,019 | INFO     | current memory leak: 30.62 B/s (using 237 data points, chi2=0.01)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,019 | INFO     | could have reported an average CPU frequency of 2273 MHz (13 samples)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,019 | INFO     | ..............................
[2025-12-11 10:11:25] 2025-12-11 15:10:53,019 | INFO     | . Timing measurements:
[2025-12-11 10:11:25] 2025-12-11 15:10:53,019 | INFO     | . get job = 0 s
[2025-12-11 10:11:25] 2025-12-11 15:10:53,019 | INFO     | . initial setup = 2 s
[2025-12-11 10:11:25] 2025-12-11 15:10:53,019 | INFO     | . payload setup = 14 s
[2025-12-11 10:11:25] 2025-12-11 15:10:53,020 | INFO     | . stage-in = 0 s
[2025-12-11 10:11:25] 2025-12-11 15:10:53,020 | INFO     | . payload execution = 16351 s
[2025-12-11 10:11:25] 2025-12-11 15:10:53,020 | INFO     | . stage-out = 2 s
[2025-12-11 10:11:25] 2025-12-11 15:10:53,020 | INFO     | . log creation = 0 s
[2025-12-11 10:11:25] 2025-12-11 15:10:53,020 | INFO     | ..............................
[2025-12-11 10:11:25] 2025-12-11 15:10:53,100 | INFO     | 
[2025-12-11 10:11:25] 2025-12-11 15:10:53,100 | INFO     | job summary report
[2025-12-11 10:11:25] 2025-12-11 15:10:53,100 | INFO     | --------------------------------------------------
[2025-12-11 10:11:25] 2025-12-11 15:10:53,100 | INFO     | PanDA job id: 6926682518
[2025-12-11 10:11:25] 2025-12-11 15:10:53,101 | INFO     | task id: 47866687
[2025-12-11 10:11:25] 2025-12-11 15:10:53,101 | INFO     | errors: (none)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,101 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-11 10:11:25] 2025-12-11 15:10:53,101 | INFO     | pilot state: finished 
[2025-12-11 10:11:25] 2025-12-11 15:10:53,101 | INFO     | transexitcode: 0
[2025-12-11 10:11:25] 2025-12-11 15:10:53,101 | INFO     | exeerrorcode: 0
[2025-12-11 10:11:25] 2025-12-11 15:10:53,101 | INFO     | exeerrordiag: 
[2025-12-11 10:11:25] 2025-12-11 15:10:53,102 | INFO     | exitcode: 0
[2025-12-11 10:11:25] 2025-12-11 15:10:53,102 | INFO     | exitmsg: OK
[2025-12-11 10:11:25] 2025-12-11 15:10:53,102 | INFO     | cpuconsumptiontime: 187760 s
[2025-12-11 10:11:25] 2025-12-11 15:10:53,102 | INFO     | nevents: 1000
[2025-12-11 10:11:25] 2025-12-11 15:10:53,102 | INFO     | neventsw: 0
[2025-12-11 10:11:25] 2025-12-11 15:10:53,102 | INFO     | pid: 32730
[2025-12-11 10:11:25] 2025-12-11 15:10:53,103 | INFO     | pgrp: 32730
[2025-12-11 10:11:25] 2025-12-11 15:10:53,103 | INFO     | corecount: 12
[2025-12-11 10:11:25] 2025-12-11 15:10:53,103 | INFO     | event service: False
[2025-12-11 10:11:25] 2025-12-11 15:10:53,103 | INFO     | sizes: {0: 2283731, 1: 2284587, 6: 2284849, 12: 2284877, 16368: 2336351, 16371: 2345345, 16372: 2345529, 16379: 2345775}
[2025-12-11 10:11:25] 2025-12-11 15:10:53,103 | INFO     | --------------------------------------------------
[2025-12-11 10:11:25] 2025-12-11 15:10:53,103 | INFO     | 
[2025-12-11 10:11:25] 2025-12-11 15:10:53,104 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-11 10:11:25] 2025-12-11 15:10:53,127 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,128 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,128 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,128 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,128 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,128 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,128 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,129 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,129 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,129 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,129 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,129 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,130 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,130 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,130 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,130 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,130 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,130 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,131 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,131 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-11 10:11:25] 2025-12-11 15:10:53,131 | INFO     | job 6926682518 has completed (purged errors)
[2025-12-11 10:11:25] 2025-12-11 15:10:53,131 | INFO     | overall cleanup function is called
[2025-12-11 10:11:25] 2025-12-11 15:10:54,148 | INFO     | --- collectZombieJob: --- 10, [32730]
[2025-12-11 10:11:25] 2025-12-11 15:10:54,148 | INFO     | zombie collector waiting for pid 32730
[2025-12-11 10:11:25] 2025-12-11 15:10:54,148 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-11 10:11:25] 2025-12-11 15:10:54,148 | INFO     | collected zombie processes
[2025-12-11 10:11:25] 2025-12-11 15:10:54,148 | INFO     | will attempt to kill all subprocesses of pid=32730
[2025-12-11 10:11:25] 2025-12-11 15:10:54,238 | INFO     | process IDs to be killed: [32730] (in reverse order)
[2025-12-11 10:11:25] 2025-12-11 15:10:54,292 | WARNING  | found no corresponding commands to process id(s)
[2025-12-11 10:11:25] 2025-12-11 15:10:54,292 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-11 10:11:25] 2025-12-11 15:10:54,296 | INFO     | did not find any defunct processes belonging to 32730
[2025-12-11 10:11:25] 2025-12-11 15:10:54,299 | INFO     | did not find any defunct processes belonging to 32730
[2025-12-11 10:11:25] 2025-12-11 15:10:54,300 | INFO     | ready for new job
[2025-12-11 10:11:25] 2025-12-11 15:10:54,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-11 10:11:25] 2025-12-11 15:10:54,302 | INFO     | ***************************************
[2025-12-11 10:11:25] 2025-12-11 15:10:54,302 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-11 10:11:25] 2025-12-11 15:10:54,302 | INFO     | ***************************************
[2025-12-11 10:11:25] 2025-12-11 15:10:54,302 | INFO     | 
[2025-12-11 10:11:25] 2025-12-11 15:10:54,303 | INFO     | architecture information:
[2025-12-11 10:11:25] 2025-12-11 15:10:54,303 | INFO     | executing command: cat /etc/os-release
[2025-12-11 10:11:25] 2025-12-11 15:10:54,317 | INFO     | cat /etc/os-release:
[2025-12-11 10:11:25] NAME="CentOS Linux"
[2025-12-11 10:11:25] VERSION="7 (Core)"
[2025-12-11 10:11:25] ID="centos"
[2025-12-11 10:11:25] ID_LIKE="rhel fedora"
[2025-12-11 10:11:25] VERSION_ID="7"
[2025-12-11 10:11:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-11 10:11:25] ANSI_COLOR="0;31"
[2025-12-11 10:11:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-11 10:11:25] HOME_URL="https://www.centos.org/"
[2025-12-11 10:11:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-11 10:11:25] 
[2025-12-11 10:11:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-11 10:11:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-11 10:11:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-11 10:11:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-11 10:11:25] 
[2025-12-11 10:11:25] 2025-12-11 15:10:54,318 | INFO     | ***************************************
[2025-12-11 10:11:25] 2025-12-11 15:10:54,821 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-11 10:11:25] 2025-12-11 15:10:54,837 | INFO     | sufficient remaining disk space (28719448064 B)
[2025-12-11 10:11:25] 2025-12-11 15:10:54,838 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-11 10:11:25] 2025-12-11 15:10:54,838 | INFO     | current server update state: UPDATING_FINAL
[2025-12-11 10:11:25] 2025-12-11 15:10:54,838 | INFO     | update_server=False
[2025-12-11 10:11:25] 2025-12-11 15:10:54,838 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-11 10:11:25] 2025-12-11 15:10:54,838 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-11 10:11:25] 2025-12-11 15:10:54,839 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-11 10:11:25] 2025-12-11 15:10:54,839 | INFO     | aborting loop
[2025-12-11 10:11:25] 2025-12-11 15:10:55,418 | INFO     | all data control threads have been joined
[2025-12-11 10:11:25] 2025-12-11 15:10:55,436 | INFO     | all job control threads have been joined
[2025-12-11 10:11:25] 2025-12-11 15:10:55,498 | INFO     | all payload control threads have been joined
[2025-12-11 10:11:25] 2025-12-11 15:10:55,842 | INFO     | [job] retrieve thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:55,844 | INFO     | [job] queue monitor thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:55,844 | INFO     | [job] job monitor thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:55,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-11 10:11:25] 2025-12-11 15:10:55,950 | INFO     | [payload] validate_post thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:55,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-11 10:11:25] 2025-12-11 15:10:56,420 | INFO     | [payload] execute_payloads thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:56,424 | INFO     | [data] control thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:56,441 | INFO     | [job] control thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:56,504 | INFO     | [payload] control thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:56,898 | INFO     | [payload] failed_post thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:56,941 | INFO     | [data] copytool_in thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:56,949 | INFO     | [job] validate thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:56,950 | INFO     | [job] create_data_payload thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:57,140 | INFO     | [payload] validate_pre thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:57,919 | INFO     | [data] copytool_out thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:10:59,990 | INFO     | [data] queue_monitor thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:11:03,353 | INFO     | [monitor] cgroup control has ended
[2025-12-11 10:11:25] 2025-12-11 15:11:05,274 | INFO     | job.realtimelogging is not enabled
[2025-12-11 10:11:25] 2025-12-11 15:11:06,285 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-11 10:11:25] 2025-12-11 15:11:06,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139839321589568)>', '<ExcThread(monitor, started 139838221182720)>']
[2025-12-11 10:11:25] 2025-12-11 15:11:11,463 | INFO     | all workflow threads have been joined
[2025-12-11 10:11:25] 2025-12-11 15:11:11,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-11 10:11:25] 2025-12-11 15:11:11,463 | INFO     | traces error code: 0
[2025-12-11 10:11:25] 2025-12-11 15:11:11,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-11 10:11:25] 2025-12-11 15:11:25,459 | INFO     | PID=25655 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-11 10:11:25] 2025-12-11 15:11:25,460 | INFO     | found 0 job(s) in 20 queues
[2025-12-11 10:11:25] 2025-12-11 15:11:25,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-11 10:11:25] 2025-12-11 15:11:25,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-11 10:11:25] 2025-12-11 15:11:25,460 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-11 10:11:25] 2025-12-11 15:11:25,460 | INFO     | [monitor] control thread has ended
[2025-12-11 10:11:25] 2025-12-11 15:11:25,556 [wrapper] ==== pilot stdout END ====
[2025-12-11 10:11:25] 2025-12-11 15:11:25,560 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-11 10:11:25] 2025-12-11 15:11:25,564 [wrapper] pilotpid: 25655
[2025-12-11 10:11:25] 2025-12-11 15:11:25,568 [wrapper] Pilot exit status: 0
[2025-12-11 10:11:25] 2025-12-11 15:11:25,584 [wrapper] pandaids: 6926682518
[2025-12-11 10:11:25] 2025-12-11 15:11:25,630 [wrapper] cleanup supervisor_pilot 29508 25656
[2025-12-11 10:11:25] 2025-12-11 15:11:25,634 [wrapper] Test setup, not cleaning
[2025-12-11 10:11:25] 2025-12-11 15:11:25,638 [wrapper] apfmon messages muted
[2025-12-11 10:11:25] 2025-12-11 15:11:25,642 [wrapper] ==== wrapper stdout END ====
[2025-12-11 10:11:25] 2025-12-11 15:11:25,646 [wrapper] ==== wrapper stderr END ====
[2025-12-11 10:11:25]  *** Error codes and diagnostics ***
[2025-12-11 10:11:25]     "exeErrorCode": 0,
[2025-12-11 10:11:25]     "exeErrorDiag": "",
[2025-12-11 10:11:25]     "pilotErrorCode": 0,
[2025-12-11 10:11:25]     "pilotErrorDiag": "",
[2025-12-11 10:11:25]  *** Listing of results directory ***
[2025-12-11 10:11:25] total 929524
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas    579449 Dec 11 05:23 pilot3.tar.gz
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas      5112 Dec 11 05:34 queuedata.json
[2025-12-11 10:11:25] -rwx------ 1 boincer umatlas     36292 Dec 11 05:36 runpilot2-wrapper.sh
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas       100 Dec 11 05:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-11 10:11:25] -rwxr-xr-x 1 boincer umatlas      7986 Dec 11 05:37 run_atlas
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas       105 Dec 11 05:37 job.xml
[2025-12-11 10:11:25] -rw-r--r-- 2 boincer umatlas 326394513 Dec 11 05:37 EVNT.47866683._000039.pool.root.1
[2025-12-11 10:11:25] -rw-r--r-- 2 boincer umatlas     15847 Dec 11 05:37 start_atlas.sh
[2025-12-11 10:11:25] drwxrwx--x 2 boincer umatlas      4096 Dec 11 05:37 shared
[2025-12-11 10:11:25] -rw-r--r-- 2 boincer umatlas    592574 Dec 11 05:37 input.tar.gz
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas         0 Dec 11 05:37 boinc_lockfile
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas      2847 Dec 11 05:37 pandaJob.out
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas        57 Dec 11 05:37 setup.sh.local
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas    991371 Dec 11 05:37 agis_schedconf.cvmfs.json
[2025-12-11 10:11:25] drwx------ 5 boincer umatlas      4096 Dec 11 05:37 pilot3
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas       532 Dec 11 10:03 boinc_task_state.xml
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas      5955 Dec 11 10:04 init_data.xml
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas 612601745 Dec 11 10:10 HITS.47866687._000382.pool.root.1
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas      1056 Dec 11 10:10 memory_monitor_summary.json
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas   1516240 Dec 11 10:10 agis_ddmendpoints.agis.ALL.json
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas   2130255 Dec 11 10:10 log.47866687._000382.job.log.tgz.1
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas     27513 Dec 11 10:10 heartbeat.json
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas      8192 Dec 11 10:11 boinc_mmap_file
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas        29 Dec 11 10:11 wrapper_checkpoint.txt
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas       745 Dec 11 10:11 pilotlog.txt
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas        95 Dec 11 10:11 pilot_heartbeat.json
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas   2307263 Dec 11 10:11 log.47866687._000382.job.log.1
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas       353 Dec 11 10:11 output.list
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas       620 Dec 11 10:11 runtime_log
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas   4474880 Dec 11 10:11 result.tar.gz
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas      9345 Dec 11 10:11 runtime_log.err
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas       669 Dec 11 10:11 HdSKDmyCtn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGANKDmcZQUxn.diag
[2025-12-11 10:11:25] -rw-r--r-- 1 boincer umatlas     21188 Dec 11 10:11 stderr.txt
[2025-12-11 10:11:25] HITS file was successfully produced:
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas 612601745 Dec 11 10:10 shared/HITS.pool.root.1
[2025-12-11 10:11:25]  *** Contents of shared directory: ***
[2025-12-11 10:11:25] total 921968
[2025-12-11 10:11:25] -rw-r--r-- 2 boincer umatlas 326394513 Dec 11 05:37 ATLAS.root_0
[2025-12-11 10:11:25] -rw-r--r-- 2 boincer umatlas     15847 Dec 11 05:37 start_atlas.sh
[2025-12-11 10:11:25] -rw-r--r-- 2 boincer umatlas    592574 Dec 11 05:37 input.tar.gz
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas 612601745 Dec 11 10:10 HITS.pool.root.1
[2025-12-11 10:11:25] -rw------- 1 boincer umatlas   4474880 Dec 11 10:11 result.tar.gz
10:11:27 (21964): run_atlas exited; CPU time 185158.290017
10:11:27 (21964): called boinc_finish(0)

</stderr_txt>
]]>

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