Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
09:35:04 (2844542): wrapper (7.7.26015): starting
09:35:04 (2844542): wrapper: running run_atlas (--nthreads 12)
[2025-12-14 09:35:04] Arguments: --nthreads 12
[2025-12-14 09:35:04] Threads: 12
[2025-12-14 09:35:04] Checking for CVMFS
[2025-12-14 09:35:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-14 09:35:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-14 09:35:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-14 09:35:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-14 09:35:04] 2.13.3.0 5263 52949 402900 153998 1 135 16757297 21551105 11649 16776704 0 243087150 99.514 296375367 32947 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-12-14 09:35:04] CVMFS is ok
[2025-12-14 09:35:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-14 09:35:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-14 09:35:04] Further information can be found at the LHC@home message board.
[2025-12-14 09:35:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-14 09:35:04] Checking for apptainer binary...
[2025-12-14 09:35:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-14 09:35:04] Running /usr/bin/apptainer --version
[2025-12-14 09:35:04] apptainer version 1.4.5-2.el9
[2025-12-14 09:35:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-14 09:35:04] c-16-30.aglt2.org
[2025-12-14 09:35:04] apptainer works
[2025-12-14 09:35:04] Set ATHENA_PROC_NUMBER=12
[2025-12-14 09:35:04] Set ATHENA_CORE_NUMBER=12
[2025-12-14 09:35:05] Starting ATLAS job with PandaID=6926682764
[2025-12-14 09:35:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/condor/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-15 09:08:32]  *** The last 200 lines of the pilot log: ***
[2025-12-15 09:08:32] 2025-12-15 13:23:58,178 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,100 | INFO     | time since job start (82122s) is within the limit (174528.0s)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,147 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-15 09:08:32] 2025-12-15 13:24:00,157 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.9941
[2025-12-15 09:08:32] 2025-12-15 13:24:00,165 | INFO     | using path: /var/lib/condor/boinchome/slots/0/PanDA_Pilot-6926682764/memory_monitor_summary.json (trf name=prmon)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,166 | INFO     | extracted standard info from prmon json
[2025-12-15 09:08:32] 2025-12-15 13:24:00,167 | INFO     | extracted standard memory fields from prmon json
[2025-12-15 09:08:32] 2025-12-15 13:24:00,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-15 09:08:32] 2025-12-15 13:24:00,200 | INFO     | fitting pss+swap vs Time
[2025-12-15 09:08:32] 2025-12-15 13:24:00,202 | INFO     | sum of square deviations: 755771140709.4872
[2025-12-15 09:08:32] 2025-12-15 13:24:00,255 | INFO     | sum of deviations: 5549521148138.034
[2025-12-15 09:08:32] 2025-12-15 13:24:00,255 | INFO     | mean x: 1765763987.6307578
[2025-12-15 09:08:32] 2025-12-15 13:24:00,255 | INFO     | mean y: 4103586.173105498
[2025-12-15 09:08:32] 2025-12-15 13:24:00,255 | INFO     | intersect: -12961652929.454626
[2025-12-15 09:08:32] 2025-12-15 13:24:00,257 | INFO     | chi2: 9.686626839166284
[2025-12-15 09:08:32] 2025-12-15 13:24:00,259 | INFO     | sum of square deviations: 747381462464.8718
[2025-12-15 09:08:32] 2025-12-15 13:24:00,312 | INFO     | sum of deviations: 6258430728721.193
[2025-12-15 09:08:32] 2025-12-15 13:24:00,312 | INFO     | mean x: 1765763835.1834452
[2025-12-15 09:08:32] 2025-12-15 13:24:00,312 | INFO     | mean y: 4116469.621178225
[2025-12-15 09:08:32] 2025-12-15 13:24:00,312 | INFO     | intersect: -14782055252.287258
[2025-12-15 09:08:32] 2025-12-15 13:24:00,314 | INFO     | chi2: 5.932411459703209
[2025-12-15 09:08:32] 2025-12-15 13:24:00,314 | INFO     | current chi2=5.932411459703209 (change=38.75668425961783 %)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,316 | INFO     | sum of square deviations: 739054157475.2579
[2025-12-15 09:08:32] 2025-12-15 13:24:00,370 | INFO     | sum of deviations: 6664506540775.37
[2025-12-15 09:08:32] 2025-12-15 13:24:00,370 | INFO     | mean x: 1765763682.736527
[2025-12-15 09:08:32] 2025-12-15 13:24:00,370 | INFO     | mean y: 4123903.4782934133
[2025-12-15 09:08:32] 2025-12-15 13:24:00,371 | INFO     | intersect: -15918854803.877342
[2025-12-15 09:08:32] 2025-12-15 13:24:00,372 | INFO     | chi2: 4.543411591217949
[2025-12-15 09:08:32] 2025-12-15 13:24:00,373 | INFO     | current chi2=4.543411591217949 (change=23.41374798292817 %)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,373 | INFO     | right removable region: 1335
[2025-12-15 09:08:32] 2025-12-15 13:24:00,374 | INFO     | sum of square deviations: 747369860264.8718
[2025-12-15 09:08:32] 2025-12-15 13:24:00,427 | INFO     | sum of deviations: 4891555305464.735
[2025-12-15 09:08:32] 2025-12-15 13:24:00,427 | INFO     | mean x: 1765764140.1834452
[2025-12-15 09:08:32] 2025-12-15 13:24:00,428 | INFO     | mean y: 4115529.5376584637
[2025-12-15 09:08:32] 2025-12-15 13:24:00,428 | INFO     | intersect: -11552857004.854605
[2025-12-15 09:08:32] 2025-12-15 13:24:00,430 | INFO     | chi2: 6.692905619248722
[2025-12-15 09:08:32] 2025-12-15 13:24:00,430 | INFO     | current chi2=6.692905619248722 (change=30.90571433817334 %)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,432 | INFO     | sum of square deviations: 739032097779.733
[2025-12-15 09:08:32] 2025-12-15 13:24:00,491 | INFO     | sum of deviations: 4665189304626.809
[2025-12-15 09:08:32] 2025-12-15 13:24:00,491 | INFO     | mean x: 1765764292.726048
[2025-12-15 09:08:32] 2025-12-15 13:24:00,491 | INFO     | mean y: 4119667.767215569
[2025-12-15 09:08:32] 2025-12-15 13:24:00,492 | INFO     | intersect: -11142384953.162912
[2025-12-15 09:08:32] 2025-12-15 13:24:00,493 | INFO     | chi2: 6.372746323045167
[2025-12-15 09:08:32] 2025-12-15 13:24:00,494 | INFO     | current chi2=6.372746323045167 (change=4.783562094208841 %)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,494 | INFO     | left removable region: 20
[2025-12-15 09:08:32] 2025-12-15 13:24:00,495 | INFO     | sum of square deviations: 704718885874.1226
[2025-12-15 09:08:32] 2025-12-15 13:24:00,543 | INFO     | sum of deviations: 5539529110644.157
[2025-12-15 09:08:32] 2025-12-15 13:24:00,544 | INFO     | mean x: 1765764262.3688214
[2025-12-15 09:08:32] 2025-12-15 13:24:00,544 | INFO     | mean y: 4147130.989353612
[2025-12-15 09:08:32] 2025-12-15 13:24:00,544 | INFO     | intersect: -13875859109.789007
[2025-12-15 09:08:32] 2025-12-15 13:24:00,546 | INFO     | chi2: 0.892298026762416
[2025-12-15 09:08:32] 2025-12-15 13:24:00,546 | INFO     | current memory leak: 7.86 B/s (using 1315 data points, chi2=0.89)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,548 | INFO     | could have reported an average CPU frequency of 2900 MHz (48 samples)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,548 | INFO     | ..............................
[2025-12-15 09:08:32] 2025-12-15 13:24:00,548 | INFO     | . Timing measurements:
[2025-12-15 09:08:32] 2025-12-15 13:24:00,548 | INFO     | . get job = 0 s
[2025-12-15 09:08:32] 2025-12-15 13:24:00,548 | INFO     | . initial setup = 2 s
[2025-12-15 09:08:32] 2025-12-15 13:24:00,549 | INFO     | . payload setup = 12 s
[2025-12-15 09:08:32] 2025-12-15 13:24:00,549 | INFO     | . stage-in = 0 s
[2025-12-15 09:08:32] 2025-12-15 13:24:00,549 | INFO     | . payload execution = 82077 s
[2025-12-15 09:08:32] 2025-12-15 13:24:00,549 | INFO     | . stage-out = 4 s
[2025-12-15 09:08:32] 2025-12-15 13:24:00,549 | INFO     | . log creation = 1 s
[2025-12-15 09:08:32] 2025-12-15 13:24:00,549 | INFO     | ..............................
[2025-12-15 09:08:32] 2025-12-15 13:24:00,732 | INFO     | 
[2025-12-15 09:08:32] 2025-12-15 13:24:00,733 | INFO     | job summary report
[2025-12-15 09:08:32] 2025-12-15 13:24:00,733 | INFO     | --------------------------------------------------
[2025-12-15 09:08:32] 2025-12-15 13:24:00,733 | INFO     | PanDA job id: 6926682764
[2025-12-15 09:08:32] 2025-12-15 13:24:00,733 | INFO     | task id: 47866687
[2025-12-15 09:08:32] 2025-12-15 13:24:00,733 | INFO     | errors: (none)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,734 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-15 09:08:32] 2025-12-15 13:24:00,734 | INFO     | pilot state: finished 
[2025-12-15 09:08:32] 2025-12-15 13:24:00,734 | INFO     | transexitcode: 0
[2025-12-15 09:08:32] 2025-12-15 13:24:00,734 | INFO     | exeerrorcode: 0
[2025-12-15 09:08:32] 2025-12-15 13:24:00,734 | INFO     | exeerrordiag: 
[2025-12-15 09:08:32] 2025-12-15 13:24:00,734 | INFO     | exitcode: 0
[2025-12-15 09:08:32] 2025-12-15 13:24:00,734 | INFO     | exitmsg: OK
[2025-12-15 09:08:32] 2025-12-15 13:24:00,734 | INFO     | cpuconsumptiontime: 327505 s
[2025-12-15 09:08:32] 2025-12-15 13:24:00,735 | INFO     | nevents: 1000
[2025-12-15 09:08:32] 2025-12-15 13:24:00,735 | INFO     | neventsw: 0
[2025-12-15 09:08:32] 2025-12-15 13:24:00,735 | INFO     | pid: 2887097
[2025-12-15 09:08:32] 2025-12-15 13:24:00,735 | INFO     | pgrp: 2887097
[2025-12-15 09:08:32] 2025-12-15 13:24:00,735 | INFO     | corecount: 12
[2025-12-15 09:08:32] 2025-12-15 13:24:00,735 | INFO     | event service: False
[2025-12-15 09:08:32] 2025-12-15 13:24:00,735 | INFO     | sizes: {0: 2284393, 1: 2284592, 5: 2284854, 12: 2284910, 82093: 2365668, 82098: 2374868, 82106: 2375058}
[2025-12-15 09:08:32] 2025-12-15 13:24:00,736 | INFO     | --------------------------------------------------
[2025-12-15 09:08:32] 2025-12-15 13:24:00,736 | INFO     | 
[2025-12-15 09:08:32] 2025-12-15 13:24:00,736 | INFO     | executing command: ls -lF /var/lib/condor/boinchome/slots/0
[2025-12-15 09:08:32] 2025-12-15 13:24:00,758 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,758 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,758 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,759 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,759 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,759 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,759 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,759 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,759 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,759 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,760 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,760 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,760 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,760 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,760 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,760 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,760 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-15 09:08:32] 2025-12-15 13:24:00,761 | INFO     | job 6926682764 has completed (purged errors)
[2025-12-15 09:08:32] 2025-12-15 13:24:00,761 | INFO     | overall cleanup function is called
[2025-12-15 09:08:32] 2025-12-15 13:24:01,787 | INFO     | --- collectZombieJob: --- 10, [2887097]
[2025-12-15 09:08:32] 2025-12-15 13:24:01,788 | INFO     | zombie collector waiting for pid 2887097
[2025-12-15 09:08:32] 2025-12-15 13:24:01,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-15 09:08:32] 2025-12-15 13:24:01,788 | INFO     | collected zombie processes
[2025-12-15 09:08:32] 2025-12-15 13:24:01,788 | INFO     | will attempt to kill all subprocesses of pid=2887097
[2025-12-15 09:08:32] 2025-12-15 13:24:02,295 | INFO     | process IDs to be killed: [2887097] (in reverse order)
[2025-12-15 09:08:32] 2025-12-15 13:24:02,418 | WARNING  | found no corresponding commands to process id(s)
[2025-12-15 09:08:32] 2025-12-15 13:24:02,419 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-15 09:08:32] 2025-12-15 13:24:02,440 | INFO     | did not find any defunct processes belonging to 2887097
[2025-12-15 09:08:32] 2025-12-15 13:24:02,455 | INFO     | did not find any defunct processes belonging to 2887097
[2025-12-15 09:08:32] 2025-12-15 13:24:02,455 | INFO     | ready for new job
[2025-12-15 09:08:32] 2025-12-15 13:24:02,455 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-15 09:08:32] 2025-12-15 13:24:02,458 | INFO     | ***************************************
[2025-12-15 09:08:32] 2025-12-15 13:24:02,459 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-15 09:08:32] 2025-12-15 13:24:02,459 | INFO     | ***************************************
[2025-12-15 09:08:32] 2025-12-15 13:24:02,460 | INFO     | 
[2025-12-15 09:08:32] 2025-12-15 13:24:02,461 | INFO     | architecture information:
[2025-12-15 09:08:32] 2025-12-15 13:24:02,461 | INFO     | executing command: cat /etc/os-release
[2025-12-15 09:08:32] 2025-12-15 13:24:02,478 | INFO     | cat /etc/os-release:
[2025-12-15 09:08:32] NAME="CentOS Linux"
[2025-12-15 09:08:32] VERSION="7 (Core)"
[2025-12-15 09:08:32] ID="centos"
[2025-12-15 09:08:32] ID_LIKE="rhel fedora"
[2025-12-15 09:08:32] VERSION_ID="7"
[2025-12-15 09:08:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-15 09:08:32] ANSI_COLOR="0;31"
[2025-12-15 09:08:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-15 09:08:32] HOME_URL="https://www.centos.org/"
[2025-12-15 09:08:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-15 09:08:32] 
[2025-12-15 09:08:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-15 09:08:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-15 09:08:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-15 09:08:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-15 09:08:32] 
[2025-12-15 09:08:32] 2025-12-15 13:24:02,478 | INFO     | ***************************************
[2025-12-15 09:08:32] 2025-12-15 13:24:02,985 | INFO     | executing command: df -mP /var/lib/condor/boinchome/slots/0
[2025-12-15 09:08:32] 2025-12-15 13:24:03,083 | INFO     | sufficient remaining disk space (1755283718144 B)
[2025-12-15 09:08:32] 2025-12-15 13:24:03,084 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-15 09:08:32] 2025-12-15 13:24:03,084 | INFO     | current server update state: UPDATING_FINAL
[2025-12-15 09:08:32] 2025-12-15 13:24:03,084 | INFO     | update_server=False
[2025-12-15 09:08:32] 2025-12-15 13:24:03,085 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-15 09:08:32] 2025-12-15 13:24:03,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-15 09:08:32] 2025-12-15 13:24:03,085 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-15 09:08:32] 2025-12-15 13:24:03,202 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-15 09:08:32] 2025-12-15 13:24:03,203 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-15 09:08:32] 2025-12-15 13:24:03,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-15 09:08:32] 2025-12-15 13:24:03,203 | INFO     | will abort loop
[2025-12-15 09:08:32] 2025-12-15 13:24:03,500 | INFO     | all job control threads have been joined
[2025-12-15 09:08:32] 2025-12-15 13:24:03,579 | INFO     | all data control threads have been joined
[2025-12-15 09:08:32] 2025-12-15 13:24:04,083 | INFO     | all payload control threads have been joined
[2025-12-15 09:08:32] 2025-12-15 13:24:04,090 | INFO     | [job] retrieve thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,209 | INFO     | [job] job monitor thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,274 | INFO     | [payload] validate_post thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,507 | INFO     | [job] control thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,536 | INFO     | [payload] validate_pre thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,544 | INFO     | [data] copytool_in thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,547 | INFO     | [payload] failed_post thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,585 | INFO     | [data] control thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,632 | INFO     | [payload] execute_payloads thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:04,823 | INFO     | [job] create_data_payload thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:05,089 | INFO     | [payload] control thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:05,091 | INFO     | [data] copytool_out thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:05,408 | INFO     | [job] validate thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:05,488 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:05,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-15 09:08:32] 2025-12-15 13:24:06,706 | INFO     | [job] queue monitor thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:07,095 | INFO     | [data] queue_monitor thread has finished
[2025-12-15 09:08:32] 2025-12-15 13:24:33,836 | INFO     | PID=2854097 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-15 09:08:32] 2025-12-15 13:24:33,836 | INFO     | .. there are 18 such processes running
[2025-12-15 09:08:32] 2025-12-15 13:24:33,836 | INFO     | found 0 job(s) in 20 queues
[2025-12-15 09:08:32] 2025-12-15 13:24:33,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-15 09:08:32] 2025-12-15 13:24:33,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-15 09:08:32] 2025-12-15 13:24:57,110 | INFO     | [monitor] cgroup control has ended
[2025-12-15 09:08:32] 2025-12-15 13:24:57,346 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140094519564096)>', '<ExcThread(monitor, started 140094014994176)>']
[2025-12-15 09:08:32] 2025-12-15 13:24:57,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-15 09:08:32] 2025-12-15 13:24:57,974 | INFO     | [monitor] control thread has ended
[2025-12-15 09:08:32] 2025-12-15 13:25:02,374 | INFO     | all workflow threads have been joined
[2025-12-15 09:08:32] 2025-12-15 13:25:02,374 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-15 09:08:32] 2025-12-15 13:25:02,375 | INFO     | traces error code: 0
[2025-12-15 09:08:32] 2025-12-15 13:25:02,375 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-15 09:08:32] 2025-12-15 13:25:02,586 [wrapper] ==== pilot stdout END ====
[2025-12-15 09:08:32] 2025-12-15 13:25:02,589 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-15 09:08:32] 2025-12-15 13:25:02,593 [wrapper] pilotpid: 2854097
[2025-12-15 09:08:32] 2025-12-15 13:25:02,597 [wrapper] Pilot exit status: 0
[2025-12-15 09:08:32] 2025-12-15 13:25:02,612 [wrapper] pandaids: 6926682764
[2025-12-15 09:08:32] 2025-12-15 13:25:02,712 [wrapper] cleanup supervisor_pilot 3511128 2854098
[2025-12-15 09:08:32] 2025-12-15 13:25:02,716 [wrapper] Test setup, not cleaning
[2025-12-15 09:08:32] 2025-12-15 13:25:02,720 [wrapper] apfmon messages muted
[2025-12-15 09:08:32] 2025-12-15 13:25:02,723 [wrapper] ==== wrapper stdout END ====
[2025-12-15 09:08:32] 2025-12-15 13:25:02,748 [wrapper] ==== wrapper stderr END ====
[2025-12-15 09:08:32]  *** Error codes and diagnostics ***
[2025-12-15 09:08:32]     "exeErrorCode": 0,
[2025-12-15 09:08:32]     "exeErrorDiag": "",
[2025-12-15 09:08:32]     "pilotErrorCode": 0,
[2025-12-15 09:08:32]     "pilotErrorDiag": "",
[2025-12-15 09:08:32]  *** Listing of results directory ***
[2025-12-15 09:08:32] total 941056
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas    579449 Dec 11 05:23 pilot3.tar.gz
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      5112 Dec 11 05:34 queuedata.json
[2025-12-15 09:08:32] -rwx------. 1 boincer umatlas     36292 Dec 11 05:36 runpilot2-wrapper.sh
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas       100 Dec 14 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-15 09:08:32] -rwxr-xr-x. 1 boincer umatlas      7986 Dec 14 09:35 run_atlas
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas       105 Dec 14 09:35 job.xml
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas 327084842 Dec 14 09:35 EVNT.47866683._000043.pool.root.1
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      6455 Dec 14 09:35 init_data.xml
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 09:35 start_atlas.sh
[2025-12-15 09:08:32] drwxrwx--x. 2 boincer umatlas        68 Dec 14 09:35 shared
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas    592590 Dec 14 09:35 input.tar.gz
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas         0 Dec 14 09:35 boinc_lockfile
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      2844 Dec 14 09:35 pandaJob.out
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas    991024 Dec 14 09:35 agis_schedconf.cvmfs.json
[2025-12-15 09:08:32] drwx------. 5 boincer umatlas      4096 Dec 14 09:35 pilot3
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas       529 Dec 15 07:59 boinc_task_state.xml
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas 607234627 Dec 15 08:23 HITS.47866687._000421.pool.root.1
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas      1052 Dec 15 08:23 memory_monitor_summary.json
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas        95 Dec 15 08:23 pilot_heartbeat.json
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas   1516240 Dec 15 08:23 agis_ddmendpoints.agis.ALL.json
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas   2878022 Dec 15 08:23 log.47866687._000421.job.log.tgz.1
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas     27340 Dec 15 08:24 heartbeat.json
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas      5023 Dec 15 08:25 pilotlog.txt
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas   9812813 Dec 15 08:25 log.47866687._000421.job.log.1
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas       353 Dec 15 08:25 output.list
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas       620 Dec 15 08:25 runtime_log
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas  12728320 Dec 15 08:25 result.tar.gz
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      8991 Dec 15 08:25 runtime_log.err
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas       659 Dec 15 08:25 okqMDmsCtn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmgjQKDmoRPevn.diag
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas        26 Dec 15 09:08 wrapper_checkpoint.txt
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas      8192 Dec 15 09:08 boinc_mmap_file
[2025-12-15 09:08:32] -rw-r--r--. 1 boincer umatlas     21247 Dec 15 09:08 stderr.txt
[2025-12-15 09:08:32] HITS file was successfully produced:
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas 607234627 Dec 15 08:23 shared/HITS.pool.root.1
[2025-12-15 09:08:32]  *** Contents of shared directory: ***
[2025-12-15 09:08:32] total 925452
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas 327084842 Dec 14 09:35 ATLAS.root_0
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas     15847 Dec 14 09:35 start_atlas.sh
[2025-12-15 09:08:32] -rw-r--r--. 2 boincer umatlas    592590 Dec 14 09:35 input.tar.gz
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas 607234627 Dec 15 08:23 HITS.pool.root.1
[2025-12-15 09:08:32] -rw-------. 1 boincer umatlas  12728320 Dec 15 08:25 result.tar.gz
09:08:34 (2844542): run_atlas exited; CPU time 329600.701857
09:08:34 (2844542): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN