Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-11 21:48:33 (8705): vboxwrapper version 26210
2025-12-11 21:48:33 (8705): BOINC client version: 8.2.8
2025-12-11 21:48:33 (8705): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-12-11 21:48:34 (8705): Successfully copied 'init_data.xml' to the shared directory.
2025-12-11 21:48:34 (8705): Create VM. (boinc_6d4a13f9ea77d402, slot#9)
2025-12-11 21:48:34 (8705): Setting Memory Size for VM. (4800MB)
2025-12-11 21:48:34 (8705): Setting CPU Count for VM. (8)
2025-12-11 21:48:34 (8705): Setting Chipset Options for VM.
2025-12-11 21:48:34 (8705): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-11 21:48:34 (8705): Setting Boot Options for VM.
2025-12-11 21:48:35 (8705): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-11 21:48:35 (8705): Enabling VM Network Access.
2025-12-11 21:48:35 (8705): Disabling USB Support for VM.
2025-12-11 21:48:35 (8705): Disabling COM Port Support for VM.
2025-12-11 21:48:35 (8705): Disabling LPT Port Support for VM.
2025-12-11 21:48:35 (8705): Disabling Audio Support for VM.
2025-12-11 21:48:35 (8705): Disabling Clipboard Support for VM.
2025-12-11 21:48:35 (8705): Disabling Drag and Drop Support for VM.
2025-12-11 21:48:36 (8705): Adding storage controller(s) to VM.
2025-12-11 21:48:36 (8705): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-11 21:48:36 (8705): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-11 21:48:36 (8705): forwarding host port 60633 to guest port 80
2025-12-11 21:48:36 (8705): Enabling remote desktop for VM.
2025-12-11 21:48:36 (8705): Enabling shared directory for VM.
2025-12-11 21:48:37 (8705): Starting VM using VBoxManage interface. (boinc_6d4a13f9ea77d402, slot#9)
2025-12-11 21:48:38 (8705): Successfully started VM. (PID = '9104')
2025-12-11 21:48:38 (8705): Reporting VM Process ID to BOINC.
2025-12-11 21:48:38 (8705): Guest Log: BIOS: VirtualBox 7.0.16
2025-12-11 21:48:38 (8705): Guest Log: CPUID EDX: 0x178bfbff
2025-12-11 21:48:38 (8705): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-11 21:48:38 (8705): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-11 21:48:38 (8705): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-11 21:48:38 (8705): Detected: Web Application Enabled (http://localhost:60633)
2025-12-11 21:48:38 (8705): Detected: Remote Desktop Enabled (localhost:43633)
2025-12-11 21:48:38 (8705): Preference change detected
2025-12-11 21:48:38 (8705): Setting CPU throttle for VM. (100%)
2025-12-11 21:48:38 (8705): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-11 21:48:40 (8705): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-11 21:48:40 (8705): Guest Log: BIOS: Booting from Hard Disk...
2025-12-11 21:48:44 (8705): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-11 21:48:44 (8705): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-11 21:48:44 (8705): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-11 21:48:51 (8705): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-11 21:48:51 (8705): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-11 21:48:59 (8705): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-11 21:48:59 (8705): Guest Log: 00:00:00.000359 main     Log opened 2025-12-11T20:48:57.581237000Z
2025-12-11 21:48:59 (8705): Guest Log: 00:00:00.000556 main     OS Product: Linux
2025-12-11 21:48:59 (8705): Guest Log: 00:00:00.000615 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-11 21:48:59 (8705): Guest Log: 00:00:00.000657 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-11 21:48:59 (8705): Guest Log: 00:00:00.000699 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-11 21:48:59 (8705): Guest Log: 00:00:00.000700 main     Process ID: 1365
2025-12-11 21:48:59 (8705): Guest Log: 00:00:00.000702 main     Package type: LINUX_64BITS_GENERIC
2025-12-11 21:48:59 (8705): Guest Log: 00:00:00.002578 main     5.2.32 r132073 started. Verbose level = 0
2025-12-11 21:48:59 (8705): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-11 21:48:59 (8705): Guest Log: [INFO] Mounting shared directory
2025-12-11 21:48:59 (8705): Guest Log: [INFO] Checking for init_data.xml
2025-12-11 21:51:08 (8705): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-11 21:51:08 (8705): Guest Log: [INFO] Detected branch: prod
2025-12-11 21:51:08 (8705): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-11 21:51:08 (8705): Guest Log: Copying input files
2025-12-11 21:51:10 (8705): Guest Log: Copied input files into RunAtlas.
2025-12-11 21:51:10 (8705): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-11 21:51:10 (8705): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-11 21:51:10 (8705): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-11 21:51:10 (8705): Guest Log: Further information can be found at the LHC@home message board.
2025-12-11 21:52:32 (8705): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-11 21:52:36 (8705): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-11 21:52:36 (8705): Guest Log: 2.6.3.0 1696 1 30156 153899 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-11 21:52:37 (8705): Guest Log: copied the webapp to /var/www
2025-12-11 21:52:37 (8705): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-11 21:52:37 (8705): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-11 21:55:00 (8705): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-11 21:55:00 (8705): Guest Log:  *** Starting ATLAS job. (PandaID=6926674085 taskID=47866669) ***
2025-12-11 22:09:01 (8705): Guest Log:  *** Job finished ***
2025-12-11 22:09:01 (8705): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:38,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:38,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:54,356 | INFO     | [monitor] cgroup control has ended
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:54,378 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140210633131840)>', '<ExcThread(monitor, started 140209517741824)>']
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:55,137 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:55,138 | INFO     | [monitor] control thread has ended
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,390 | INFO     | all workflow threads have been joined
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,390 | INFO     | end of generic workflow (traces error code: 0)
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,391 | INFO     | traces error code: 0
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,391 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,508 [wrapper] ==== pilot stdout END ====
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,519 [wrapper] ==== wrapper stdout RESUME ====
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,530 [wrapper] pilotpid: 6225
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,539 [wrapper] Pilot exit status: 0
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,571 [wrapper] pandaids: 6926674085
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,646 [wrapper] cleanup supervisor_pilot  6231 6226
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,656 [wrapper] Test setup, not cleaning
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,667 [wrapper] apfmon messages muted
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,678 [wrapper] ==== wrapper stdout END ====
2025-12-11 22:09:01 (8705): Guest Log: 2025-12-11 21:08:59,689 [wrapper] ==== wrapper stderr END ====
2025-12-11 22:09:01 (8705): Guest Log:  *** Error codes and diagnostics ***
2025-12-11 22:09:01 (8705): Guest Log:     "exeErrorCode": 0,
2025-12-11 22:09:01 (8705): Guest Log:     "exeErrorDiag": "",
2025-12-11 22:09:01 (8705): Guest Log:     "pilotErrorCode": 1305,
2025-12-11 22:09:01 (8705): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
2025-12-11 22:09:01 (8705): Guest Log:  *** Listing of results directory ***
2025-12-11 22:09:01 (8705): Guest Log: total 4108
2025-12-11 22:09:01 (8705): Guest Log: -rw-r--r--. 1 atlas atlas  579449 Dec 11 10:18 pilot3.tar.gz
2025-12-11 22:09:01 (8705): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Dec 11 10:22 queuedata.json
2025-12-11 22:09:01 (8705): Guest Log: -rwx------. 1 atlas atlas   36292 Dec 11 10:22 runpilot2-wrapper.sh
2025-12-11 22:09:01 (8705): Guest Log: -rw-r--r--. 1 atlas atlas   15847 Dec 11 20:51 start_atlas.sh
2025-12-11 22:09:01 (8705): Guest Log: -rw-r--r--. 1 atlas atlas    8886 Dec 11 20:51 init_data.xml
2025-12-11 22:09:01 (8705): Guest Log: -rw-r--r--. 1 atlas atlas  592576 Dec 11 20:51 input.tar.gz
2025-12-11 22:09:01 (8705): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Dec 11 20:51 EVNT.47866667._000017.pool.root.1 -> /data/./ATLAS.root_0
2025-12-11 22:09:01 (8705): Guest Log: -rw-r--r--. 1 atlas atlas    2822 Dec 11 20:54 pandaJob.out
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas  990036 Dec 11 20:58 agis_schedconf.cvmfs.json
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas 1516240 Dec 11 20:58 agis_ddmendpoints.agis.ALL.json
2025-12-11 22:09:01 (8705): Guest Log: drwx------. 5 atlas atlas    4096 Dec 11 20:58 pilot3
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas    1009 Dec 11 21:05 memory_monitor_summary.json
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas   51416 Dec 11 21:05 log.47866669._000148.job.log.tgz.1
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas      95 Dec 11 21:07 pilot_heartbeat.json
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas    7612 Dec 11 21:08 heartbeat.json
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas    4805 Dec 11 21:08 pilotlog.txt
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas  130593 Dec 11 21:08 log.47866669._000148.job.log.1
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas     186 Dec 11 21:08 output.list
2025-12-11 22:09:01 (8705): Guest Log: -rw-r--r--. 1 atlas atlas     620 Dec 11 21:08 runtime_log
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas  204800 Dec 11 21:08 result.tar.gz
2025-12-11 22:09:01 (8705): Guest Log: -rw-r--r--. 1 atlas atlas    8605 Dec 11 21:08 runtime_log.err
2025-12-11 22:09:01 (8705): Guest Log: -rw-------. 1 atlas atlas     646 Dec 11 21:08 br8NDmyzsn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwgQKDmU40m6n.diag
2025-12-11 22:09:01 (8705): Guest Log: Looking for outputfile HITS.47866669._000148.pool.root.1
2025-12-11 22:09:01 (8705): Guest Log: No HITS file was produced
2025-12-11 22:09:01 (8705): Guest Log: Successfully finished the ATLAS job!
2025-12-11 22:09:01 (8705): Guest Log: Copying the results back to the shared directory!
2025-12-11 22:09:02 (8705): Guest Log:  *** Contents of shared directory: ***
2025-12-11 22:09:02 (8705): Guest Log: total 320452
2025-12-11 22:09:02 (8705): Guest Log: -rw-r--r--. 1 root root 327307883 Dec 11 20:48 ATLAS.root_0
2025-12-11 22:09:02 (8705): Guest Log: -rw-r--r--. 1 root root      8886 Dec 11 20:48 init_data.xml
2025-12-11 22:09:02 (8705): Guest Log: -rw-r--r--. 1 root root    592576 Dec 11 20:48 input.tar.gz
2025-12-11 22:09:02 (8705): Guest Log: -rw-r--r--. 1 root root    204800 Dec 11  2025 result.tar.gz
2025-12-11 22:09:02 (8705): Guest Log: -rw-r--r--. 1 root root     15847 Dec 11 20:48 start_atlas.sh
2025-12-11 22:09:02 (8705): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-11 22:09:02 (8705): VM Completion File Detected.
2025-12-11 22:09:02 (8705): Powering off VM.
2025-12-11 22:09:02 (8705): Successfully stopped VM.
2025-12-11 22:09:02 (8705): Deregistering VM. (boinc_6d4a13f9ea77d402, slot#9)
2025-12-11 22:09:02 (8705): Removing network bandwidth throttle group from VM.
2025-12-11 22:09:02 (8705): Removing VM from VirtualBox.
2025-12-11 22:09:08 (8705): called boinc_finish(0)

</stderr_txt>
]]>

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