Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-11 11:26:26 (54010): vboxwrapper version 26210
2025-12-11 11:26:26 (54010): BOINC client version: 8.2.8
2025-12-11 11:26:26 (54010): Detected: VirtualBox VboxManage Interface (Version: 7.0.16)
2025-12-11 11:26:26 (54010): Successfully copied 'init_data.xml' to the shared directory.
2025-12-11 11:26:27 (54010): Create VM. (boinc_51a55a3bef470337, slot#15)
2025-12-11 11:26:27 (54010): Setting Memory Size for VM. (4800MB)
2025-12-11 11:26:27 (54010): Setting CPU Count for VM. (8)
2025-12-11 11:26:27 (54010): Setting Chipset Options for VM.
2025-12-11 11:26:28 (54010): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-11 11:26:28 (54010): Setting Boot Options for VM.
2025-12-11 11:26:28 (54010): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-11 11:26:28 (54010): Enabling VM Network Access.
2025-12-11 11:26:29 (54010): Disabling USB Support for VM.
2025-12-11 11:26:29 (54010): Disabling COM Port Support for VM.
2025-12-11 11:26:29 (54010): Disabling LPT Port Support for VM.
2025-12-11 11:26:29 (54010): Disabling Audio Support for VM.
2025-12-11 11:26:29 (54010): Disabling Clipboard Support for VM.
2025-12-11 11:26:29 (54010): Disabling Drag and Drop Support for VM.
2025-12-11 11:26:30 (54010): Adding storage controller(s) to VM.
2025-12-11 11:26:30 (54010): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-11 11:26:30 (54010): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-11 11:26:30 (54010): forwarding host port 49641 to guest port 80
2025-12-11 11:26:31 (54010): Enabling remote desktop for VM.
2025-12-11 11:26:31 (54010): Enabling shared directory for VM.
2025-12-11 11:26:31 (54010): Starting VM using VBoxManage interface. (boinc_51a55a3bef470337, slot#15)
2025-12-11 11:26:33 (54010): Successfully started VM. (PID = '54415')
2025-12-11 11:26:33 (54010): Reporting VM Process ID to BOINC.
2025-12-11 11:26:33 (54010): Guest Log: BIOS: VirtualBox 7.0.16
2025-12-11 11:26:33 (54010): Guest Log: CPUID EDX: 0x178bfbff
2025-12-11 11:26:33 (54010): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-11 11:26:33 (54010): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-11 11:26:33 (54010): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-11 11:26:33 (54010): Detected: Web Application Enabled (http://localhost:49641)
2025-12-11 11:26:33 (54010): Detected: Remote Desktop Enabled (localhost:59485)
2025-12-11 11:26:33 (54010): Preference change detected
2025-12-11 11:26:33 (54010): Setting CPU throttle for VM. (100%)
2025-12-11 11:26:33 (54010): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-11 11:26:35 (54010): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-11 11:26:35 (54010): Guest Log: BIOS: Booting from Hard Disk...
2025-12-11 11:27:17 (54010): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-11 11:27:17 (54010): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-11 11:27:17 (54010): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-11 11:27:29 (54010): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-11 11:27:29 (54010): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-11 11:28:40 (54010): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-11 11:28:40 (54010): Guest Log: 00:00:00.000392 main     Log opened 2025-12-11T10:28:39.881125000Z
2025-12-11 11:28:40 (54010): Guest Log: 00:00:00.000611 main     OS Product: Linux
2025-12-11 11:28:40 (54010): Guest Log: 00:00:00.000675 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-11 11:28:40 (54010): Guest Log: 00:00:00.000721 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-11 11:28:40 (54010): Guest Log: 00:00:00.000768 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-11 11:28:40 (54010): Guest Log: 00:00:00.000769 main     Process ID: 1387
2025-12-11 11:28:40 (54010): Guest Log: 00:00:00.000771 main     Package type: LINUX_64BITS_GENERIC
2025-12-11 11:28:40 (54010): Guest Log: 00:00:00.002386 main     5.2.32 r132073 started. Verbose level = 0
2025-12-11 11:28:41 (54010): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-11 11:28:41 (54010): Guest Log: [INFO] Mounting shared directory
2025-12-11 11:28:41 (54010): Guest Log: [INFO] Checking for init_data.xml
2025-12-11 11:28:47 (54010): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-11 11:28:47 (54010): Guest Log: [INFO] Detected branch: prod
2025-12-11 11:28:48 (54010): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-11 11:28:48 (54010): Guest Log: Copying input files
2025-12-11 11:31:12 (54010): Guest Log: Copied input files into RunAtlas.
2025-12-11 11:31:12 (54010): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-11 11:31:12 (54010): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-11 11:31:12 (54010): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-11 11:31:12 (54010): Guest Log: Further information can be found at the LHC@home message board.
2025-12-11 11:32:17 (54010): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-11 11:32:18 (54010): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-11 11:32:18 (54010): Guest Log: 2.6.3.0 1663 3 32172 153879 3 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-11 11:32:21 (54010): Guest Log: copied the webapp to /var/www
2025-12-11 11:32:21 (54010): Guest Log: ATHENA_PROC_NUMBER=8
2025-12-11 11:32:21 (54010): Guest Log: ATHENA_CORE_NUMBER=8
2025-12-11 11:32:22 (54010): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-11 11:32:22 (54010): Guest Log:  *** Starting ATLAS job. (PandaID=6926673881 taskID=47866669) ***
2025-12-11 11:58:59 (54010): Guest Log:  *** Job finished ***
2025-12-11 11:58:59 (54010): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:34,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:34,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:51,241 | INFO     | [monitor] cgroup control has ended
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:52,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698730125120)>', '<ExcThread(monitor, started 139698131412736)>']
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:52,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:52,909 | INFO     | [monitor] control thread has ended
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,137 | INFO     | all workflow threads have been joined
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,137 | INFO     | end of generic workflow (traces error code: 0)
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,138 | INFO     | traces error code: 0
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,269 [wrapper] ==== pilot stdout END ====
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,283 [wrapper] ==== wrapper stdout RESUME ====
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,296 [wrapper] pilotpid: 6149
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,308 [wrapper] Pilot exit status: 0
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,351 [wrapper] pandaids: 6926673881
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,443 [wrapper] cleanup supervisor_pilot 20618 6150
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,461 [wrapper] Test setup, not cleaning
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,476 [wrapper] apfmon messages muted
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,489 [wrapper] ==== wrapper stdout END ====
2025-12-11 11:58:59 (54010): Guest Log: 2025-12-11 10:58:57,503 [wrapper] ==== wrapper stderr END ====
2025-12-11 11:58:59 (54010): Guest Log:  *** Error codes and diagnostics ***
2025-12-11 11:58:59 (54010): Guest Log:     "exeErrorCode": 0,
2025-12-11 11:58:59 (54010): Guest Log:     "exeErrorDiag": "",
2025-12-11 11:58:59 (54010): Guest Log:     "pilotErrorCode": 1305,
2025-12-11 11:58:59 (54010): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
2025-12-11 11:58:59 (54010): Guest Log:  *** Listing of results directory ***
2025-12-11 11:58:59 (54010): Guest Log: total 4304
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 atlas atlas  579449 Dec 11 10:18 pilot3.tar.gz
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 atlas atlas    5112 Dec 11 10:22 queuedata.json
2025-12-11 11:58:59 (54010): Guest Log: -rwx------. 1 atlas atlas   36292 Dec 11 10:22 runpilot2-wrapper.sh
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 atlas atlas   15847 Dec 11 10:28 start_atlas.sh
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 atlas atlas  592580 Dec 11 10:28 input.tar.gz
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 atlas atlas    8907 Dec 11 10:28 init_data.xml
2025-12-11 11:58:59 (54010): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Dec 11 10:31 EVNT.47866667._000011.pool.root.1 -> /data/./ATLAS.root_0
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 atlas atlas    2820 Dec 11 10:32 pandaJob.out
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas 1516240 Dec 11 10:36 agis_ddmendpoints.agis.ALL.json
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas  991371 Dec 11 10:37 agis_schedconf.cvmfs.json
2025-12-11 11:58:59 (54010): Guest Log: drwx------. 5 atlas atlas    4096 Dec 11 10:37 pilot3
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas    1011 Dec 11 10:55 memory_monitor_summary.json
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas   66380 Dec 11 10:55 log.47866669._000086.job.log.tgz.1
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas    7609 Dec 11 10:58 heartbeat.json
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas      96 Dec 11 10:58 pilot_heartbeat.json
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas    4805 Dec 11 10:58 pilotlog.txt
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas  215196 Dec 11 10:58 log.47866669._000086.job.log.1
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas     186 Dec 11 10:58 output.list
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 atlas atlas     620 Dec 11 10:58 runtime_log
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas  296960 Dec 11 10:58 result.tar.gz
2025-12-11 11:58:59 (54010): Guest Log: -rw-------. 1 atlas atlas     648 Dec 11 10:58 TuUMDmyzsn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJgQKDmUBeAxm.diag
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 atlas atlas    8606 Dec 11 10:58 runtime_log.err
2025-12-11 11:58:59 (54010): Guest Log: Looking for outputfile HITS.47866669._000086.pool.root.1
2025-12-11 11:58:59 (54010): Guest Log: No HITS file was produced
2025-12-11 11:58:59 (54010): Guest Log: Successfully finished the ATLAS job!
2025-12-11 11:58:59 (54010): Guest Log: Copying the results back to the shared directory!
2025-12-11 11:58:59 (54010): Guest Log:  *** Contents of shared directory: ***
2025-12-11 11:58:59 (54010): Guest Log: total 320232
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 root root 326988678 Dec 11 10:26 ATLAS.root_0
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 root root      8907 Dec 11 10:26 init_data.xml
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 root root    592580 Dec 11 10:26 input.tar.gz
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 root root    296960 Dec 11 10:58 result.tar.gz
2025-12-11 11:58:59 (54010): Guest Log: -rw-r--r--. 1 root root     15847 Dec 11 10:26 start_atlas.sh
2025-12-11 11:58:59 (54010): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-11 11:58:59 (54010): VM Completion File Detected.
2025-12-11 11:58:59 (54010): Powering off VM.
2025-12-11 11:59:00 (54010): Successfully stopped VM.
2025-12-11 11:59:00 (54010): Deregistering VM. (boinc_51a55a3bef470337, slot#15)
2025-12-11 11:59:00 (54010): Removing network bandwidth throttle group from VM.
2025-12-11 11:59:00 (54010): Removing VM from VirtualBox.
2025-12-11 11:59:05 (54010): called boinc_finish(0)

</stderr_txt>
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