Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
07:31:43 (985671): wrapper (7.7.26015): starting
07:31:43 (985671): wrapper: running run_atlas (--nthreads 4)
[2025-12-12 07:31:43] Arguments: --nthreads 4
[2025-12-12 07:31:43] Threads: 4
[2025-12-12 07:31:43] Checking for CVMFS
[2025-12-12 07:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 07:31:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 07:31:43] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 07:31:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 07:31:43] 2.13.2.0 15124 1342 50316 153922 3 88 3457700 4096000 3093 130560 0 2337199 99.976 143868 1686 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-12 07:31:43] CVMFS is ok
[2025-12-12 07:31:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 07:31:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-12 07:31:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-12 07:31:43] Further information can be found at the LHC@home message board.
[2025-12-12 07:31:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 07:31:43] Checking for apptainer binary...
[2025-12-12 07:31:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 07:31:43] Running /usr/bin/apptainer --version
[2025-12-12 07:31:43] apptainer version 1.4.3
[2025-12-12 07:31:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 07:31:43] Taichi-Ubuntu
[2025-12-12 07:31:43] apptainer works
[2025-12-12 07:31:43] Set ATHENA_PROC_NUMBER=4
[2025-12-12 07:31:43] Set ATHENA_CORE_NUMBER=4
[2025-12-12 07:31:43] Starting ATLAS job with PandaID=6926673862
[2025-12-12 07:31:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 17:30:02]  *** The last 200 lines of the pilot log: ***
[2025-12-12 17:30:02] 2025-12-12 22:29:13,553 | INFO     | .. there are 5 such processes running
[2025-12-12 17:30:02] 2025-12-12 22:29:13,980 | INFO     | monitor loop #2608: job 0:6926673862 is in state 'finished'
[2025-12-12 17:30:02] 2025-12-12 22:29:13,981 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,553 | INFO     | time since job start (35836s) is within the limit (174528.0s)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,668 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-12 17:30:02] 2025-12-12 22:29:14,679 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 3095.919104166667
[2025-12-12 17:30:02] 2025-12-12 22:29:14,690 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-6926673862/memory_monitor_summary.json (trf name=prmon)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,691 | INFO     | extracted standard info from prmon json
[2025-12-12 17:30:02] 2025-12-12 22:29:14,691 | INFO     | extracted standard memory fields from prmon json
[2025-12-12 17:30:02] 2025-12-12 22:29:14,691 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-12 17:30:02] 2025-12-12 22:29:14,702 | INFO     | fitting pss+swap vs Time
[2025-12-12 17:30:02] 2025-12-12 22:29:14,703 | INFO     | sum of square deviations: 62717894078.0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,712 | INFO     | sum of deviations: 306147221692.99976
[2025-12-12 17:30:02] 2025-12-12 22:29:14,712 | INFO     | mean x: 1765560626.0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,712 | INFO     | mean y: 2618459.451448041
[2025-12-12 17:30:02] 2025-12-12 22:29:14,712 | INFO     | intersect: -8615679210.24113
[2025-12-12 17:30:02] 2025-12-12 22:29:14,713 | INFO     | chi2: 5.805822458210854
[2025-12-12 17:30:02] 2025-12-12 22:29:14,714 | INFO     | sum of square deviations: 61128831725.5
[2025-12-12 17:30:02] 2025-12-12 22:29:14,718 | INFO     | sum of deviations: 461900951810.99963
[2025-12-12 17:30:02] 2025-12-12 22:29:14,719 | INFO     | mean x: 1765560473.5
[2025-12-12 17:30:02] 2025-12-12 22:29:14,719 | INFO     | mean y: 2633390.030927835
[2025-12-12 17:30:02] 2025-12-12 22:29:14,719 | INFO     | intersect: -13338273677.38381
[2025-12-12 17:30:02] 2025-12-12 22:29:14,719 | INFO     | chi2: 3.01933899348049
[2025-12-12 17:30:02] 2025-12-12 22:29:14,719 | INFO     | current chi2=3.01933899348049 (change=47.99463787924817 %)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,720 | INFO     | sum of square deviations: 59566839648.0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,724 | INFO     | sum of deviations: 454247854967.00006
[2025-12-12 17:30:02] 2025-12-12 22:29:14,724 | INFO     | mean x: 1765560321.0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,724 | INFO     | mean y: 2632642.7504332755
[2025-12-12 17:30:02] 2025-12-12 22:29:14,724 | INFO     | intersect: -13461267630.764008
[2025-12-12 17:30:02] 2025-12-12 22:29:14,725 | INFO     | chi2: 3.0193931878463047
[2025-12-12 17:30:02] 2025-12-12 22:29:14,725 | INFO     | current chi2=3.0193931878463047 (change=-0.00179490828726327 %)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,725 | INFO     | right removable region: 576
[2025-12-12 17:30:02] 2025-12-12 22:29:14,726 | INFO     | sum of square deviations: 61128831725.5
[2025-12-12 17:30:02] 2025-12-12 22:29:14,729 | INFO     | sum of deviations: 132088132968.99982
[2025-12-12 17:30:02] 2025-12-12 22:29:14,730 | INFO     | mean x: 1765560778.5
[2025-12-12 17:30:02] 2025-12-12 22:29:14,730 | INFO     | mean y: 2635142.384879725
[2025-12-12 17:30:02] 2025-12-12 22:29:14,730 | INFO     | intersect: -3812416123.809613
[2025-12-12 17:30:02] 2025-12-12 22:29:14,730 | INFO     | chi2: 2.8738470011013693
[2025-12-12 17:30:02] 2025-12-12 22:29:14,730 | INFO     | current chi2=2.8738470011013693 (change=50.500604836149506 %)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,731 | INFO     | sum of square deviations: 59566839648.0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,734 | INFO     | sum of deviations: 115506991152.00003
[2025-12-12 17:30:02] 2025-12-12 22:29:14,735 | INFO     | mean x: 1765560931.0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,735 | INFO     | mean y: 2636759.415944541
[2025-12-12 17:30:02] 2025-12-12 22:29:14,735 | INFO     | intersect: -3420990077.9393787
[2025-12-12 17:30:02] 2025-12-12 22:29:14,735 | INFO     | chi2: 2.860910192215478
[2025-12-12 17:30:02] 2025-12-12 22:29:14,735 | INFO     | current chi2=2.860910192215478 (change=0.45015649340182523 %)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,735 | INFO     | left removable region: 20
[2025-12-12 17:30:02] 2025-12-12 22:29:14,736 | INFO     | sum of square deviations: 53296831855.0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,739 | INFO     | sum of deviations: 237324546709.5
[2025-12-12 17:30:02] 2025-12-12 22:29:14,740 | INFO     | mean x: 1765560900.5
[2025-12-12 17:30:02] 2025-12-12 22:29:14,740 | INFO     | mean y: 2654094.1636690646
[2025-12-12 17:30:02] 2025-12-12 22:29:14,740 | INFO     | intersect: -7859181700.112909
[2025-12-12 17:30:02] 2025-12-12 22:29:14,740 | INFO     | chi2: 0.01890966022941675
[2025-12-12 17:30:02] 2025-12-12 22:29:14,741 | INFO     | current memory leak: 4.45 B/s (using 556 data points, chi2=0.02)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,741 | INFO     | could have reported an average CPU frequency of 3152 MHz (23 samples)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | ..............................
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | . Timing measurements:
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | . get job = 0 s
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | . initial setup = 3 s
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | . payload setup = 12 s
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | . stage-in = 0 s
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | . payload execution = 35792 s
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | . stage-out = 3 s
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | . log creation = 0 s
[2025-12-12 17:30:02] 2025-12-12 22:29:14,742 | INFO     | ..............................
[2025-12-12 17:30:02] 2025-12-12 22:29:14,818 | INFO     | 
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | job summary report
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | --------------------------------------------------
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | PanDA job id: 6926673862
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | task id: 47866669
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | errors: (none)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | pilot state: finished 
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | transexitcode: 0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | exeerrorcode: 0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,819 | INFO     | exeerrordiag: 
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | exitcode: 0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | exitmsg: OK
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | cpuconsumptiontime: 141076 s
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | nevents: 1000
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | neventsw: 0
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | pid: 997023
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | pgrp: 997023
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | corecount: 4
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | event service: False
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | sizes: {0: 2284532, 1: 2284532, 6: 2284822, 11: 2284850, 35807: 2345608, 35808: 2345607, 35812: 2354869, 35819: 2355059}
[2025-12-12 17:30:02] 2025-12-12 22:29:14,820 | INFO     | --------------------------------------------------
[2025-12-12 17:30:02] 2025-12-12 22:29:14,821 | INFO     | 
[2025-12-12 17:30:02] 2025-12-12 22:29:14,821 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/8
[2025-12-12 17:30:02] 2025-12-12 22:29:14,852 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,853 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,853 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,853 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,853 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,853 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,853 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,853 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,854 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,855 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,855 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 17:30:02] 2025-12-12 22:29:14,855 | INFO     | job 6926673862 has completed (purged errors)
[2025-12-12 17:30:02] 2025-12-12 22:29:14,855 | INFO     | overall cleanup function is called
[2025-12-12 17:30:02] 2025-12-12 22:29:15,877 | INFO     | --- collectZombieJob: --- 10, [997023]
[2025-12-12 17:30:02] 2025-12-12 22:29:15,877 | INFO     | zombie collector waiting for pid 997023
[2025-12-12 17:30:02] 2025-12-12 22:29:15,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 17:30:02] 2025-12-12 22:29:15,877 | INFO     | collected zombie processes
[2025-12-12 17:30:02] 2025-12-12 22:29:15,878 | INFO     | will attempt to kill all subprocesses of pid=997023
[2025-12-12 17:30:02] 2025-12-12 22:29:16,188 | INFO     | process IDs to be killed: [997023] (in reverse order)
[2025-12-12 17:30:02] 2025-12-12 22:29:16,274 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 17:30:02] 2025-12-12 22:29:16,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 17:30:02] 2025-12-12 22:29:16,287 | INFO     | did not find any defunct processes belonging to 997023
[2025-12-12 17:30:02] 2025-12-12 22:29:16,297 | INFO     | did not find any defunct processes belonging to 997023
[2025-12-12 17:30:02] 2025-12-12 22:29:16,297 | INFO     | ready for new job
[2025-12-12 17:30:02] 2025-12-12 22:29:16,298 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 17:30:02] 2025-12-12 22:29:16,302 | INFO     | ***************************************
[2025-12-12 17:30:02] 2025-12-12 22:29:16,302 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 17:30:02] 2025-12-12 22:29:16,302 | INFO     | ***************************************
[2025-12-12 17:30:02] 2025-12-12 22:29:16,302 | INFO     | 
[2025-12-12 17:30:02] 2025-12-12 22:29:16,306 | INFO     | architecture information:
[2025-12-12 17:30:02] 2025-12-12 22:29:16,307 | INFO     | executing command: cat /etc/os-release
[2025-12-12 17:30:02] 2025-12-12 22:29:16,331 | INFO     | cat /etc/os-release:
[2025-12-12 17:30:02] NAME="CentOS Linux"
[2025-12-12 17:30:02] VERSION="7 (Core)"
[2025-12-12 17:30:02] ID="centos"
[2025-12-12 17:30:02] ID_LIKE="rhel fedora"
[2025-12-12 17:30:02] VERSION_ID="7"
[2025-12-12 17:30:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 17:30:02] ANSI_COLOR="0;31"
[2025-12-12 17:30:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 17:30:02] HOME_URL="https://www.centos.org/"
[2025-12-12 17:30:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 17:30:02] 
[2025-12-12 17:30:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 17:30:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 17:30:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 17:30:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 17:30:02] 
[2025-12-12 17:30:02] 2025-12-12 22:29:16,331 | INFO     | ***************************************
[2025-12-12 17:30:02] 2025-12-12 22:29:16,834 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/8
[2025-12-12 17:30:02] 2025-12-12 22:29:16,859 | INFO     | sufficient remaining disk space (363780374528 B)
[2025-12-12 17:30:02] 2025-12-12 22:29:16,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 17:30:02] 2025-12-12 22:29:16,860 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 17:30:02] 2025-12-12 22:29:16,860 | INFO     | update_server=False
[2025-12-12 17:30:02] 2025-12-12 22:29:16,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 17:30:02] 2025-12-12 22:29:17,003 | INFO     | all payload control threads have been joined
[2025-12-12 17:30:02] 2025-12-12 22:29:17,204 | INFO     | all job control threads have been joined
[2025-12-12 17:30:02] 2025-12-12 22:29:17,489 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 17:30:02] 2025-12-12 22:29:17,489 | INFO     | aborting loop
[2025-12-12 17:30:02] 2025-12-12 22:29:17,823 | INFO     | all data control threads have been joined
[2025-12-12 17:30:02] 2025-12-12 22:29:17,866 | INFO     | [job] retrieve thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:17,873 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 17:30:02] 2025-12-12 22:29:17,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 17:30:02] 2025-12-12 22:29:18,008 | INFO     | [payload] control thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,157 | INFO     | [job] validate thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,160 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,161 | INFO     | [data] copytool_in thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,162 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,210 | INFO     | [job] control thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,443 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,495 | INFO     | [job] job monitor thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,636 | INFO     | [payload] failed_post thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,748 | INFO     | [payload] validate_post thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:18,829 | INFO     | [data] control thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:19,210 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:19,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 17:30:02] 2025-12-12 22:29:19,879 | INFO     | [data] copytool_out thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:20,836 | INFO     | [job] queue monitor thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:21,959 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 17:30:02] 2025-12-12 22:29:47,921 | INFO     | PID=989596 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-12 17:30:02] 2025-12-12 22:29:47,922 | INFO     | .. there are 5 such processes running
[2025-12-12 17:30:02] 2025-12-12 22:29:47,922 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 17:30:02] 2025-12-12 22:29:47,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 17:30:02] 2025-12-12 22:29:47,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 17:30:02] 2025-12-12 22:29:54,997 | INFO     | [monitor] cgroup control has ended
[2025-12-12 17:30:02] 2025-12-12 22:29:56,862 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138382037387072)>', '<ExcThread(monitor, started 138381388392192)>']
[2025-12-12 17:30:02] 2025-12-12 22:29:56,966 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 17:30:02] 2025-12-12 22:29:56,967 | INFO     | [monitor] control thread has ended
[2025-12-12 17:30:02] 2025-12-12 22:30:01,888 | INFO     | all workflow threads have been joined
[2025-12-12 17:30:02] 2025-12-12 22:30:01,889 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 17:30:02] 2025-12-12 22:30:01,889 | INFO     | traces error code: 0
[2025-12-12 17:30:02] 2025-12-12 22:30:01,890 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 17:30:02] 2025-12-12 22:30:02,087 [wrapper] ==== pilot stdout END ====
[2025-12-12 17:30:02] 2025-12-12 22:30:02,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 17:30:02] 2025-12-12 22:30:02,097 [wrapper] pilotpid: 989596
[2025-12-12 17:30:02] 2025-12-12 22:30:02,101 [wrapper] Pilot exit status: 0
[2025-12-12 17:30:02] 2025-12-12 22:30:02,113 [wrapper] pandaids: 6926673862
[2025-12-12 17:30:02] 2025-12-12 22:30:02,178 [wrapper] cleanup supervisor_pilot 1380926 989597
[2025-12-12 17:30:02] 2025-12-12 22:30:02,182 [wrapper] Test setup, not cleaning
[2025-12-12 17:30:02] 2025-12-12 22:30:02,185 [wrapper] apfmon messages muted
[2025-12-12 17:30:02] 2025-12-12 22:30:02,190 [wrapper] ==== wrapper stdout END ====
[2025-12-12 17:30:02] 2025-12-12 22:30:02,195 [wrapper] ==== wrapper stderr END ====
[2025-12-12 17:30:02]  *** Error codes and diagnostics ***
[2025-12-12 17:30:02]     "exeErrorCode": 0,
[2025-12-12 17:30:02]     "exeErrorDiag": "",
[2025-12-12 17:30:02]     "pilotErrorCode": 0,
[2025-12-12 17:30:02]     "pilotErrorDiag": "",
[2025-12-12 17:30:02]  *** Listing of results directory ***
[2025-12-12 17:30:02] total 931544
[2025-12-12 17:30:02] -rw-r--r-- 1 whitlerd whitlerd    579449 Dec 11 05:18 pilot3.tar.gz
[2025-12-12 17:30:02] -rw-r--r-- 1 whitlerd whitlerd      5112 Dec 11 05:22 queuedata.json
[2025-12-12 17:30:02] -rwx------ 1 whitlerd whitlerd     36292 Dec 11 05:22 runpilot2-wrapper.sh
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd       100 Dec 12 07:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 17:30:02] -rwxr-xr-x 1 whitlerd whitlerd      7986 Dec 12 07:31 run_atlas
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd       105 Dec 12 07:31 job.xml
[2025-12-12 17:30:02] -rw-r--r-- 2 whitlerd whitlerd 324033335 Dec 12 07:31 EVNT.47866667._000001.pool.root.1
[2025-12-12 17:30:02] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 12 07:31 start_atlas.sh
[2025-12-12 17:30:02] drwxrwx--x 2 whitlerd whitlerd      4096 Dec 12 07:31 shared
[2025-12-12 17:30:02] -rw-r--r-- 2 whitlerd whitlerd    592569 Dec 12 07:31 input.tar.gz
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd      9347 Dec 12 07:31 init_data.xml
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 12 07:31 boinc_setup_complete
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 12 07:31 boinc_lockfile
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd      2819 Dec 12 07:31 pandaJob.out
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd    987248 Dec 12 07:31 agis_schedconf.cvmfs.json
[2025-12-12 17:30:02] drwx------ 5 whitlerd whitlerd      4096 Dec 12 07:31 pilot3
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd       532 Dec 12 17:23 boinc_task_state.xml
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd 612765065 Dec 12 17:28 HITS.47866669._000067.pool.root.1
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd      1056 Dec 12 17:28 memory_monitor_summary.json
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd   1516240 Dec 12 17:29 agis_ddmendpoints.agis.ALL.json
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd   1497880 Dec 12 17:29 log.47866669._000067.job.log.tgz.1
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd        95 Dec 12 17:29 pilot_heartbeat.json
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd     28339 Dec 12 17:29 heartbeat.json
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd        29 Dec 12 17:30 wrapper_checkpoint.txt
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd      8192 Dec 12 17:30 boinc_mmap_file
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd      4837 Dec 12 17:30 pilotlog.txt
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd   5073970 Dec 12 17:30 log.47866669._000067.job.log.1
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd       353 Dec 12 17:30 output.list
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd       620 Dec 12 17:30 runtime_log
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd   6615040 Dec 12 17:30 result.tar.gz
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd      9026 Dec 12 17:30 runtime_log.err
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd       662 Dec 12 17:30 98rLDmyzsn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3fQKDmuw0mAo.diag
[2025-12-12 17:30:02] -rw-rw-r-- 1 whitlerd whitlerd     21242 Dec 12 17:30 stderr.txt
[2025-12-12 17:30:02] HITS file was successfully produced:
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd 612765065 Dec 12 17:28 shared/HITS.pool.root.1
[2025-12-12 17:30:02]  *** Contents of shared directory: ***
[2025-12-12 17:30:02] total 921908
[2025-12-12 17:30:02] -rw-r--r-- 2 whitlerd whitlerd 324033335 Dec 12 07:31 ATLAS.root_0
[2025-12-12 17:30:02] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 12 07:31 start_atlas.sh
[2025-12-12 17:30:02] -rw-r--r-- 2 whitlerd whitlerd    592569 Dec 12 07:31 input.tar.gz
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd 612765065 Dec 12 17:28 HITS.pool.root.1
[2025-12-12 17:30:02] -rw------- 1 whitlerd whitlerd   6615040 Dec 12 17:30 result.tar.gz
17:30:03 (985671): run_atlas exited; CPU time 140195.846307
17:30:03 (985671): called boinc_finish(0)

</stderr_txt>
]]>

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