Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
06:56:05 (947253): wrapper (7.7.26015): starting
06:56:05 (947253): wrapper: running run_atlas (--nthreads 4)
[2025-12-12 06:56:05] Arguments: --nthreads 4
[2025-12-12 06:56:05] Threads: 4
[2025-12-12 06:56:05] Checking for CVMFS
[2025-12-12 06:56:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-12 06:56:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-12 06:56:06] Running cvmfs_config stat atlas.cern.ch
[2025-12-12 06:56:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-12 06:56:06] 2.13.2.0 15124 1307 50704 153922 2 80 3448631 4096001 3239 130560 0 2218452 99.975 143751 1758 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-12 06:56:06] CVMFS is ok
[2025-12-12 06:56:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-12 06:56:06] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-12 06:56:06] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-12 06:56:06] Further information can be found at the LHC@home message board.
[2025-12-12 06:56:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-12 06:56:06] Checking for apptainer binary...
[2025-12-12 06:56:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-12 06:56:06] Running /usr/bin/apptainer --version
[2025-12-12 06:56:06] apptainer version 1.4.3
[2025-12-12 06:56:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-12 06:56:06] Taichi-Ubuntu
[2025-12-12 06:56:06] apptainer works
[2025-12-12 06:56:06] Set ATHENA_PROC_NUMBER=4
[2025-12-12 06:56:06] Set ATHENA_CORE_NUMBER=4
[2025-12-12 06:56:06] Starting ATLAS job with PandaID=6926675665
[2025-12-12 06:56:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 17:14:27]  *** The last 200 lines of the pilot log: ***
[2025-12-12 17:14:27] 2025-12-12 22:13:50,491 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-12 17:14:27] 2025-12-12 22:13:50,500 | INFO     | monitor loop #2695: job 0:6926675665 is in state 'finished'
[2025-12-12 17:14:27] 2025-12-12 22:13:50,501 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,502 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 3010.3008125
[2025-12-12 17:14:27] 2025-12-12 22:13:50,511 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/3/PanDA_Pilot-6926675665/memory_monitor_summary.json (trf name=prmon)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,512 | INFO     | extracted standard info from prmon json
[2025-12-12 17:14:27] 2025-12-12 22:13:50,513 | INFO     | extracted standard memory fields from prmon json
[2025-12-12 17:14:27] 2025-12-12 22:13:50,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-12 17:14:27] 2025-12-12 22:13:50,525 | INFO     | fitting pss+swap vs Time
[2025-12-12 17:14:27] 2025-12-12 22:13:50,526 | INFO     | sum of square deviations: 69349497488.0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,533 | INFO     | sum of deviations: 230009059031.99997
[2025-12-12 17:14:27] 2025-12-12 22:13:50,533 | INFO     | mean x: 1765559105.0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,533 | INFO     | mean y: 2630815.5205930807
[2025-12-12 17:14:27] 2025-12-12 22:13:50,533 | INFO     | intersect: -5853137475.759373
[2025-12-12 17:14:27] 2025-12-12 22:13:50,534 | INFO     | chi2: 5.1637153813336605
[2025-12-12 17:14:27] 2025-12-12 22:13:50,535 | INFO     | sum of square deviations: 67649828410.5
[2025-12-12 17:14:27] 2025-12-12 22:13:50,541 | INFO     | sum of deviations: 394266098076.99994
[2025-12-12 17:14:27] 2025-12-12 22:13:50,541 | INFO     | mean x: 1765558952.5
[2025-12-12 17:14:27] 2025-12-12 22:13:50,542 | INFO     | mean y: 2645543.289036545
[2025-12-12 17:14:27] 2025-12-12 22:13:50,542 | INFO     | intersect: -10287107667.95559
[2025-12-12 17:14:27] 2025-12-12 22:13:50,542 | INFO     | chi2: 2.4930955484064774
[2025-12-12 17:14:27] 2025-12-12 22:13:50,542 | INFO     | current chi2=2.4930955484064774 (change=51.71895884465708 %)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,543 | INFO     | sum of square deviations: 65978159858.0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,547 | INFO     | sum of deviations: 398373138285.0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,547 | INFO     | mean x: 1765558800.0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,547 | INFO     | mean y: 2645912.1423785593
[2025-12-12 17:14:27] 2025-12-12 22:13:50,548 | INFO     | intersect: -10657718085.527006
[2025-12-12 17:14:27] 2025-12-12 22:13:50,548 | INFO     | chi2: 2.4634448300250145
[2025-12-12 17:14:27] 2025-12-12 22:13:50,548 | INFO     | current chi2=2.4634448300250145 (change=1.189313357862073 %)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,548 | INFO     | right removable region: 596
[2025-12-12 17:14:27] 2025-12-12 22:13:50,549 | INFO     | sum of square deviations: 67649828410.5
[2025-12-12 17:14:27] 2025-12-12 22:13:50,553 | INFO     | sum of deviations: 69806186126.99997
[2025-12-12 17:14:27] 2025-12-12 22:13:50,553 | INFO     | mean x: 1765559257.5
[2025-12-12 17:14:27] 2025-12-12 22:13:50,553 | INFO     | mean y: 2645168.7541528237
[2025-12-12 17:14:27] 2025-12-12 22:13:50,553 | INFO     | intersect: -1819191797.326955
[2025-12-12 17:14:27] 2025-12-12 22:13:50,553 | INFO     | chi2: 2.802122768007416
[2025-12-12 17:14:27] 2025-12-12 22:13:50,554 | INFO     | current chi2=2.802122768007416 (change=45.73436835545152 %)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,554 | INFO     | sum of square deviations: 65978159858.0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,558 | INFO     | sum of deviations: 63969671234.99998
[2025-12-12 17:14:27] 2025-12-12 22:13:50,559 | INFO     | mean x: 1765559410.0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,559 | INFO     | mean y: 2645699.0485762144
[2025-12-12 17:14:27] 2025-12-12 22:13:50,559 | INFO     | intersect: -1709167046.9667408
[2025-12-12 17:14:27] 2025-12-12 22:13:50,559 | INFO     | chi2: 2.7997991951813948
[2025-12-12 17:14:27] 2025-12-12 22:13:50,559 | INFO     | current chi2=2.7997991951813948 (change=0.08292187810435038 %)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,559 | INFO     | left removable region: 20
[2025-12-12 17:14:27] 2025-12-12 22:13:50,560 | INFO     | sum of square deviations: 59257669200.0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,563 | INFO     | sum of deviations: 234655994441.00024
[2025-12-12 17:14:27] 2025-12-12 22:13:50,563 | INFO     | mean x: 1765559379.5
[2025-12-12 17:14:27] 2025-12-12 22:13:50,563 | INFO     | mean y: 2660842.576388889
[2025-12-12 17:14:27] 2025-12-12 22:13:50,564 | INFO     | intersect: -6988823931.198814
[2025-12-12 17:14:27] 2025-12-12 22:13:50,564 | INFO     | chi2: 0.053294211179049526
[2025-12-12 17:14:27] 2025-12-12 22:13:50,564 | INFO     | current memory leak: 3.96 B/s (using 576 data points, chi2=0.05)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | could have reported an average CPU frequency of 3168 MHz (24 samples)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | ..............................
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | . Timing measurements:
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | . get job = 0 s
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | . initial setup = 4 s
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | . payload setup = 14 s
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | . stage-in = 0 s
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | . payload execution = 37000 s
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | . stage-out = 3 s
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | . log creation = 0 s
[2025-12-12 17:14:27] 2025-12-12 22:13:50,565 | INFO     | ..............................
[2025-12-12 17:14:27] 2025-12-12 22:13:50,630 | INFO     | 
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | job summary report
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | --------------------------------------------------
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | PanDA job id: 6926675665
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | task id: 47866687
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | errors: (none)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | pilot state: finished 
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | transexitcode: 0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | exeerrorcode: 0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,631 | INFO     | exeerrordiag: 
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | exitcode: 0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | exitmsg: OK
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | cpuconsumptiontime: 145978 s
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | nevents: 1000
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | neventsw: 0
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | pid: 958610
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | pgrp: 958610
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | corecount: 4
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | event service: False
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | sizes: {0: 2283727, 1: 2284597, 6: 2284859, 12: 2284887, 37019: 2346407, 37023: 2355429, 37024: 2355613, 37030: 2355859}
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | --------------------------------------------------
[2025-12-12 17:14:27] 2025-12-12 22:13:50,632 | INFO     | 
[2025-12-12 17:14:27] 2025-12-12 22:13:50,633 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/3
[2025-12-12 17:14:27] 2025-12-12 22:13:50,663 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,663 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,663 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,663 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,664 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,665 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,665 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,665 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,665 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 17:14:27] 2025-12-12 22:13:50,665 | INFO     | job 6926675665 has completed (purged errors)
[2025-12-12 17:14:27] 2025-12-12 22:13:50,665 | INFO     | overall cleanup function is called
[2025-12-12 17:14:27] 2025-12-12 22:13:51,679 | INFO     | --- collectZombieJob: --- 10, [958610]
[2025-12-12 17:14:27] 2025-12-12 22:13:51,680 | INFO     | zombie collector waiting for pid 958610
[2025-12-12 17:14:27] 2025-12-12 22:13:51,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 17:14:27] 2025-12-12 22:13:51,680 | INFO     | collected zombie processes
[2025-12-12 17:14:27] 2025-12-12 22:13:51,680 | INFO     | will attempt to kill all subprocesses of pid=958610
[2025-12-12 17:14:27] 2025-12-12 22:13:51,981 | INFO     | process IDs to be killed: [958610] (in reverse order)
[2025-12-12 17:14:27] 2025-12-12 22:13:52,066 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 17:14:27] 2025-12-12 22:13:52,066 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 17:14:27] 2025-12-12 22:13:52,074 | INFO     | did not find any defunct processes belonging to 958610
[2025-12-12 17:14:27] 2025-12-12 22:13:52,080 | INFO     | did not find any defunct processes belonging to 958610
[2025-12-12 17:14:27] 2025-12-12 22:13:52,080 | INFO     | ready for new job
[2025-12-12 17:14:27] 2025-12-12 22:13:52,080 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 17:14:27] 2025-12-12 22:13:52,084 | INFO     | ***************************************
[2025-12-12 17:14:27] 2025-12-12 22:13:52,084 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 17:14:27] 2025-12-12 22:13:52,084 | INFO     | ***************************************
[2025-12-12 17:14:27] 2025-12-12 22:13:52,084 | INFO     | 
[2025-12-12 17:14:27] 2025-12-12 22:13:52,087 | INFO     | architecture information:
[2025-12-12 17:14:27] 2025-12-12 22:13:52,088 | INFO     | executing command: cat /etc/os-release
[2025-12-12 17:14:27] 2025-12-12 22:13:52,108 | INFO     | cat /etc/os-release:
[2025-12-12 17:14:27] NAME="CentOS Linux"
[2025-12-12 17:14:27] VERSION="7 (Core)"
[2025-12-12 17:14:27] ID="centos"
[2025-12-12 17:14:27] ID_LIKE="rhel fedora"
[2025-12-12 17:14:27] VERSION_ID="7"
[2025-12-12 17:14:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 17:14:27] ANSI_COLOR="0;31"
[2025-12-12 17:14:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 17:14:27] HOME_URL="https://www.centos.org/"
[2025-12-12 17:14:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 17:14:27] 
[2025-12-12 17:14:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 17:14:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 17:14:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 17:14:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 17:14:27] 
[2025-12-12 17:14:27] 2025-12-12 22:13:52,108 | INFO     | ***************************************
[2025-12-12 17:14:27] 2025-12-12 22:13:52,612 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/3
[2025-12-12 17:14:27] 2025-12-12 22:13:52,635 | INFO     | sufficient remaining disk space (362124673024 B)
[2025-12-12 17:14:27] 2025-12-12 22:13:52,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 17:14:27] 2025-12-12 22:13:52,635 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 17:14:27] 2025-12-12 22:13:52,635 | INFO     | update_server=False
[2025-12-12 17:14:27] 2025-12-12 22:13:52,636 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 17:14:27] 2025-12-12 22:13:52,636 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 17:14:27] 2025-12-12 22:13:52,641 | INFO     | all data control threads have been joined
[2025-12-12 17:14:27] 2025-12-12 22:13:53,004 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-12 17:14:27] 2025-12-12 22:13:53,005 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-12 17:14:27] 2025-12-12 22:13:53,005 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 17:14:27] 2025-12-12 22:13:53,005 | INFO     | will abort loop
[2025-12-12 17:14:27] 2025-12-12 22:13:53,566 | INFO     | all payload control threads have been joined
[2025-12-12 17:14:27] 2025-12-12 22:13:53,641 | INFO     | [job] retrieve thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:53,647 | INFO     | [data] control thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:53,869 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:53,869 | INFO     | [data] copytool_in thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:53,939 | INFO     | [payload] validate_post thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:53,981 | INFO     | all job control threads have been joined
[2025-12-12 17:14:27] 2025-12-12 22:13:54,011 | INFO     | [job] job monitor thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:54,546 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:54,572 | INFO     | [payload] control thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:54,581 | INFO     | [payload] failed_post thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:54,606 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:54,642 | INFO     | [data] copytool_out thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:54,734 | INFO     | [job] validate thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:54,985 | INFO     | [job] control thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:55,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 17:14:27] 2025-12-12 22:13:55,130 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:55,641 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 17:14:27] 2025-12-12 22:13:56,646 | INFO     | [job] queue monitor thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:13:59,134 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 17:14:27] 2025-12-12 22:14:20,755 | INFO     | [monitor] cgroup control has ended
[2025-12-12 17:14:27] 2025-12-12 22:14:22,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133514415560512)>', '<ExcThread(monitor, started 133512883599104)>']
[2025-12-12 17:14:27] 2025-12-12 22:14:23,678 | INFO     | PID=951175 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-12 17:14:27] 2025-12-12 22:14:23,678 | INFO     | .. there are 5 such processes running
[2025-12-12 17:14:27] 2025-12-12 22:14:23,700 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 17:14:27] 2025-12-12 22:14:23,700 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 17:14:27] 2025-12-12 22:14:23,700 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 17:14:27] 2025-12-12 22:14:23,700 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 17:14:27] 2025-12-12 22:14:23,700 | INFO     | [monitor] control thread has ended
[2025-12-12 17:14:27] 2025-12-12 22:14:27,186 | INFO     | all workflow threads have been joined
[2025-12-12 17:14:27] 2025-12-12 22:14:27,187 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 17:14:27] 2025-12-12 22:14:27,187 | INFO     | traces error code: 0
[2025-12-12 17:14:27] 2025-12-12 22:14:27,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 17:14:27] 2025-12-12 22:14:27,392 [wrapper] ==== pilot stdout END ====
[2025-12-12 17:14:27] 2025-12-12 22:14:27,397 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 17:14:27] 2025-12-12 22:14:27,402 [wrapper] pilotpid: 951175
[2025-12-12 17:14:27] 2025-12-12 22:14:27,406 [wrapper] Pilot exit status: 0
[2025-12-12 17:14:27] 2025-12-12 22:14:27,420 [wrapper] pandaids: 6926675665
[2025-12-12 17:14:27] 2025-12-12 22:14:27,482 [wrapper] cleanup supervisor_pilot 1358441 951176
[2025-12-12 17:14:27] 2025-12-12 22:14:27,486 [wrapper] Test setup, not cleaning
[2025-12-12 17:14:27] 2025-12-12 22:14:27,491 [wrapper] apfmon messages muted
[2025-12-12 17:14:27] 2025-12-12 22:14:27,496 [wrapper] ==== wrapper stdout END ====
[2025-12-12 17:14:27] 2025-12-12 22:14:27,499 [wrapper] ==== wrapper stderr END ====
[2025-12-12 17:14:27]  *** Error codes and diagnostics ***
[2025-12-12 17:14:27]     "exeErrorCode": 0,
[2025-12-12 17:14:27]     "exeErrorDiag": "",
[2025-12-12 17:14:27]     "pilotErrorCode": 0,
[2025-12-12 17:14:27]     "pilotErrorDiag": "",
[2025-12-12 17:14:27]  *** Listing of results directory ***
[2025-12-12 17:14:27] total 937196
[2025-12-12 17:14:27] -rw-r--r-- 1 whitlerd whitlerd    579449 Dec 11 05:18 pilot3.tar.gz
[2025-12-12 17:14:27] -rw-r--r-- 1 whitlerd whitlerd      5112 Dec 11 05:20 queuedata.json
[2025-12-12 17:14:27] -rwx------ 1 whitlerd whitlerd     36292 Dec 11 05:21 runpilot2-wrapper.sh
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd       100 Dec 12 06:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 17:14:27] -rwxr-xr-x 1 whitlerd whitlerd      7986 Dec 12 06:56 run_atlas
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd       105 Dec 12 06:56 job.xml
[2025-12-12 17:14:27] -rw-r--r-- 2 whitlerd whitlerd 328977005 Dec 12 06:56 EVNT.47866683._000009.pool.root.1
[2025-12-12 17:14:27] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 12 06:56 start_atlas.sh
[2025-12-12 17:14:27] drwxrwx--x 2 whitlerd whitlerd      4096 Dec 12 06:56 shared
[2025-12-12 17:14:27] -rw-r--r-- 2 whitlerd whitlerd    592587 Dec 12 06:56 input.tar.gz
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 12 06:56 boinc_setup_complete
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd      9347 Dec 12 06:56 init_data.xml
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 12 06:56 boinc_lockfile
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd      2845 Dec 12 06:56 pandaJob.out
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd    987248 Dec 12 06:56 agis_schedconf.cvmfs.json
[2025-12-12 17:14:27] drwx------ 5 whitlerd whitlerd      4096 Dec 12 06:56 pilot3
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd       533 Dec 12 17:07 boinc_task_state.xml
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd 613269578 Dec 12 17:13 HITS.47866687._000085.pool.root.1
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd      1056 Dec 12 17:13 memory_monitor_summary.json
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd   1516240 Dec 12 17:13 agis_ddmendpoints.agis.ALL.json
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd   1501625 Dec 12 17:13 log.47866687._000085.job.log.tgz.1
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd     28667 Dec 12 17:13 heartbeat.json
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd      8192 Dec 12 17:14 boinc_mmap_file
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd        29 Dec 12 17:14 wrapper_checkpoint.txt
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd        95 Dec 12 17:14 pilot_heartbeat.json
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd      5023 Dec 12 17:14 pilotlog.txt
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd   5240586 Dec 12 17:14 log.47866687._000085.job.log.1
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd       353 Dec 12 17:14 output.list
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd       620 Dec 12 17:14 runtime_log
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd   6778880 Dec 12 17:14 result.tar.gz
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd       662 Dec 12 17:14 SpoMDmpysn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmN6MKDmsh2e4m.diag
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd      9026 Dec 12 17:14 runtime_log.err
[2025-12-12 17:14:27] -rw-rw-r-- 1 whitlerd whitlerd     21252 Dec 12 17:14 stderr.txt
[2025-12-12 17:14:27] HITS file was successfully produced:
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd 613269578 Dec 12 17:13 shared/HITS.pool.root.1
[2025-12-12 17:14:27]  *** Contents of shared directory: ***
[2025-12-12 17:14:27] total 927392
[2025-12-12 17:14:27] -rw-r--r-- 2 whitlerd whitlerd 328977005 Dec 12 06:56 ATLAS.root_0
[2025-12-12 17:14:27] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 12 06:56 start_atlas.sh
[2025-12-12 17:14:27] -rw-r--r-- 2 whitlerd whitlerd    592587 Dec 12 06:56 input.tar.gz
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd 613269578 Dec 12 17:13 HITS.pool.root.1
[2025-12-12 17:14:27] -rw------- 1 whitlerd whitlerd   6778880 Dec 12 17:14 result.tar.gz
17:14:29 (947253): run_atlas exited; CPU time 144852.307899
17:14:29 (947253): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN