Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
22:35:29 (639441): wrapper (7.7.26015): starting
22:35:29 (639441): wrapper: running run_atlas (--nthreads 4)
[2025-12-11 22:35:29] Arguments: --nthreads 4
[2025-12-11 22:35:29] Threads: 4
[2025-12-11 22:35:29] Checking for CVMFS
[2025-12-11 22:35:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-11 22:35:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-11 22:35:29] Running cvmfs_config stat atlas.cern.ch
[2025-12-11 22:35:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-11 22:35:29] 2.13.2.0 15124 806 51224 153909 2 76 3381492 4096001 2468 130560 0 1491723 99.966 123274 2107 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-11 22:35:29] CVMFS is ok
[2025-12-11 22:35:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-11 22:35:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-11 22:35:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-11 22:35:29] Further information can be found at the LHC@home message board.
[2025-12-11 22:35:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-11 22:35:29] Checking for apptainer binary...
[2025-12-11 22:35:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-11 22:35:29] Running /usr/bin/apptainer --version
[2025-12-11 22:35:29] apptainer version 1.4.3
[2025-12-11 22:35:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-11 22:35:29] Taichi-Ubuntu
[2025-12-11 22:35:29] apptainer works
[2025-12-11 22:35:29] Set ATHENA_PROC_NUMBER=4
[2025-12-11 22:35:29] Set ATHENA_CORE_NUMBER=4
[2025-12-11 22:35:29] Starting ATLAS job with PandaID=6926674850
[2025-12-11 22:35:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 07:33:38]  *** The last 200 lines of the pilot log: ***
[2025-12-12 07:33:38] 2025-12-12 12:33:05,310 | INFO     | monitor loop #2371: job 0:6926674850 is in state 'finished'
[2025-12-12 07:33:38] 2025-12-12 12:33:05,310 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,177 | INFO     | PID=646936 has CPU usage=14.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-12 07:33:38] 2025-12-12 12:33:06,178 | INFO     | .. there are 5 such processes running
[2025-12-12 07:33:38] 2025-12-12 12:33:06,248 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-12 07:33:38] 2025-12-12 12:33:06,259 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 2929.287979166666
[2025-12-12 07:33:38] 2025-12-12 12:33:06,270 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/13/PanDA_Pilot-6926674850/memory_monitor_summary.json (trf name=prmon)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,270 | INFO     | extracted standard info from prmon json
[2025-12-12 07:33:38] 2025-12-12 12:33:06,271 | INFO     | extracted standard memory fields from prmon json
[2025-12-12 07:33:38] 2025-12-12 12:33:06,271 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-12 07:33:38] 2025-12-12 12:33:06,281 | INFO     | fitting pss+swap vs Time
[2025-12-12 07:33:38] 2025-12-12 12:33:06,282 | INFO     | sum of square deviations: 45643467892.0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,288 | INFO     | sum of deviations: 237326255197.49997
[2025-12-12 07:33:38] 2025-12-12 12:33:06,288 | INFO     | mean x: 1765526649.5
[2025-12-12 07:33:38] 2025-12-12 12:33:06,288 | INFO     | mean y: 2625223.6571969697
[2025-12-12 07:33:38] 2025-12-12 12:33:06,288 | INFO     | intersect: -9177348330.689316
[2025-12-12 07:33:38] 2025-12-12 12:33:06,289 | INFO     | chi2: 4.558529983229786
[2025-12-12 07:33:38] 2025-12-12 12:33:06,290 | INFO     | sum of square deviations: 44359015902.0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,296 | INFO     | sum of deviations: 344935722779.99994
[2025-12-12 07:33:38] 2025-12-12 12:33:06,296 | INFO     | mean x: 1765526497.0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,296 | INFO     | mean y: 2637958.554493308
[2025-12-12 07:33:38] 2025-12-12 12:33:06,296 | INFO     | intersect: -13726096684.147058
[2025-12-12 07:33:38] 2025-12-12 12:33:06,297 | INFO     | chi2: 2.4910866545390324
[2025-12-12 07:33:38] 2025-12-12 12:33:06,297 | INFO     | current chi2=2.4910866545390324 (change=45.35329012415399 %)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,297 | INFO     | sum of square deviations: 43098889949.5
[2025-12-12 07:33:38] 2025-12-12 12:33:06,300 | INFO     | sum of deviations: 339137743296.00183
[2025-12-12 07:33:38] 2025-12-12 12:33:06,301 | INFO     | mean x: 1765526344.5
[2025-12-12 07:33:38] 2025-12-12 12:33:06,301 | INFO     | mean y: 2637256.806949807
[2025-12-12 07:33:38] 2025-12-12 12:33:06,301 | INFO     | intersect: -13889985520.8318
[2025-12-12 07:33:38] 2025-12-12 12:33:06,301 | INFO     | chi2: 2.490955198036799
[2025-12-12 07:33:38] 2025-12-12 12:33:06,301 | INFO     | current chi2=2.490955198036799 (change=0.005277074645071987 %)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,301 | INFO     | right removable region: 517
[2025-12-12 07:33:38] 2025-12-12 12:33:06,302 | INFO     | sum of square deviations: 44359015902.0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,305 | INFO     | sum of deviations: 108028998712.0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,305 | INFO     | mean x: 1765526802.0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,305 | INFO     | mean y: 2640530.0076481835
[2025-12-12 07:33:38] 2025-12-12 12:33:06,306 | INFO     | intersect: -4297006086.153197
[2025-12-12 07:33:38] 2025-12-12 12:33:06,306 | INFO     | chi2: 2.1258665982814073
[2025-12-12 07:33:38] 2025-12-12 12:33:06,306 | INFO     | current chi2=2.1258665982814073 (change=53.36508466320979 %)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,306 | INFO     | sum of square deviations: 43098889949.5
[2025-12-12 07:33:38] 2025-12-12 12:33:06,309 | INFO     | sum of deviations: 95949224435.50002
[2025-12-12 07:33:38] 2025-12-12 12:33:06,309 | INFO     | mean x: 1765526954.5
[2025-12-12 07:33:38] 2025-12-12 12:33:06,310 | INFO     | mean y: 2641989.384169884
[2025-12-12 07:33:38] 2025-12-12 12:33:06,310 | INFO     | intersect: -3927875529.8080053
[2025-12-12 07:33:38] 2025-12-12 12:33:06,310 | INFO     | chi2: 2.1175783372679637
[2025-12-12 07:33:38] 2025-12-12 12:33:06,310 | INFO     | current chi2=2.1175783372679637 (change=0.38987681636016075 %)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,310 | INFO     | left removable region: 20
[2025-12-12 07:33:38] 2025-12-12 12:33:06,310 | INFO     | sum of square deviations: 38066752808.0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,314 | INFO     | sum of deviations: 184528134241.00006
[2025-12-12 07:33:38] 2025-12-12 12:33:06,314 | INFO     | mean x: 1765526924.0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,314 | INFO     | mean y: 2656182.3581488933
[2025-12-12 07:33:38] 2025-12-12 12:33:06,314 | INFO     | intersect: -8555714711.034811
[2025-12-12 07:33:38] 2025-12-12 12:33:06,315 | INFO     | chi2: 0.016700290551032223
[2025-12-12 07:33:38] 2025-12-12 12:33:06,315 | INFO     | current memory leak: 4.85 B/s (using 497 data points, chi2=0.02)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | could have reported an average CPU frequency of 3130 MHz (21 samples)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | ..............................
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | . Timing measurements:
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | . get job = 0 s
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | . initial setup = 3 s
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | . payload setup = 11 s
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | . stage-in = 0 s
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | . payload execution = 32201 s
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | . stage-out = 3 s
[2025-12-12 07:33:38] 2025-12-12 12:33:06,316 | INFO     | . log creation = 0 s
[2025-12-12 07:33:38] 2025-12-12 12:33:06,317 | INFO     | ..............................
[2025-12-12 07:33:38] 2025-12-12 12:33:06,382 | INFO     | 
[2025-12-12 07:33:38] 2025-12-12 12:33:06,382 | INFO     | job summary report
[2025-12-12 07:33:38] 2025-12-12 12:33:06,382 | INFO     | --------------------------------------------------
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | PanDA job id: 6926674850
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | task id: 47866687
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | errors: (none)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | pilot state: finished 
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | transexitcode: 0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | exeerrorcode: 0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | exeerrordiag: 
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | exitcode: 0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,383 | INFO     | exitmsg: OK
[2025-12-12 07:33:38] 2025-12-12 12:33:06,384 | INFO     | cpuconsumptiontime: 127778 s
[2025-12-12 07:33:38] 2025-12-12 12:33:06,384 | INFO     | nevents: 1000
[2025-12-12 07:33:38] 2025-12-12 12:33:06,384 | INFO     | neventsw: 0
[2025-12-12 07:33:38] 2025-12-12 12:33:06,384 | INFO     | pid: 661766
[2025-12-12 07:33:38] 2025-12-12 12:33:06,384 | INFO     | pgrp: 661766
[2025-12-12 07:33:38] 2025-12-12 12:33:06,384 | INFO     | corecount: 4
[2025-12-12 07:33:38] 2025-12-12 12:33:06,385 | INFO     | event service: False
[2025-12-12 07:33:38] 2025-12-12 12:33:06,385 | INFO     | sizes: {0: 2284393, 1: 2284592, 5: 2284854, 11: 2284910, 32216: 2344223, 32220: 2353247, 32221: 2353431, 32228: 2353677}
[2025-12-12 07:33:38] 2025-12-12 12:33:06,385 | INFO     | --------------------------------------------------
[2025-12-12 07:33:38] 2025-12-12 12:33:06,385 | INFO     | 
[2025-12-12 07:33:38] 2025-12-12 12:33:06,385 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/13
[2025-12-12 07:33:38] 2025-12-12 12:33:06,415 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,417 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,417 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,417 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,417 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 07:33:38] 2025-12-12 12:33:06,417 | INFO     | job 6926674850 has completed (purged errors)
[2025-12-12 07:33:38] 2025-12-12 12:33:06,417 | INFO     | overall cleanup function is called
[2025-12-12 07:33:38] 2025-12-12 12:33:07,435 | INFO     | --- collectZombieJob: --- 10, [661766]
[2025-12-12 07:33:38] 2025-12-12 12:33:07,435 | INFO     | zombie collector waiting for pid 661766
[2025-12-12 07:33:38] 2025-12-12 12:33:07,435 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 07:33:38] 2025-12-12 12:33:07,435 | INFO     | collected zombie processes
[2025-12-12 07:33:38] 2025-12-12 12:33:07,435 | INFO     | will attempt to kill all subprocesses of pid=661766
[2025-12-12 07:33:38] 2025-12-12 12:33:07,776 | INFO     | process IDs to be killed: [661766] (in reverse order)
[2025-12-12 07:33:38] 2025-12-12 12:33:07,864 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 07:33:38] 2025-12-12 12:33:07,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 07:33:38] 2025-12-12 12:33:07,877 | INFO     | did not find any defunct processes belonging to 661766
[2025-12-12 07:33:38] 2025-12-12 12:33:07,889 | INFO     | did not find any defunct processes belonging to 661766
[2025-12-12 07:33:38] 2025-12-12 12:33:07,889 | INFO     | ready for new job
[2025-12-12 07:33:38] 2025-12-12 12:33:07,889 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 07:33:38] 2025-12-12 12:33:07,895 | INFO     | ***************************************
[2025-12-12 07:33:38] 2025-12-12 12:33:07,896 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 07:33:38] 2025-12-12 12:33:07,896 | INFO     | ***************************************
[2025-12-12 07:33:38] 2025-12-12 12:33:07,896 | INFO     | 
[2025-12-12 07:33:38] 2025-12-12 12:33:07,898 | INFO     | architecture information:
[2025-12-12 07:33:38] 2025-12-12 12:33:07,899 | INFO     | executing command: cat /etc/os-release
[2025-12-12 07:33:38] 2025-12-12 12:33:07,920 | INFO     | cat /etc/os-release:
[2025-12-12 07:33:38] NAME="CentOS Linux"
[2025-12-12 07:33:38] VERSION="7 (Core)"
[2025-12-12 07:33:38] ID="centos"
[2025-12-12 07:33:38] ID_LIKE="rhel fedora"
[2025-12-12 07:33:38] VERSION_ID="7"
[2025-12-12 07:33:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 07:33:38] ANSI_COLOR="0;31"
[2025-12-12 07:33:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 07:33:38] HOME_URL="https://www.centos.org/"
[2025-12-12 07:33:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 07:33:38] 
[2025-12-12 07:33:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 07:33:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 07:33:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 07:33:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 07:33:38] 
[2025-12-12 07:33:38] 2025-12-12 12:33:07,920 | INFO     | ***************************************
[2025-12-12 07:33:38] 2025-12-12 12:33:08,423 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/13
[2025-12-12 07:33:38] 2025-12-12 12:33:08,447 | INFO     | sufficient remaining disk space (364026789888 B)
[2025-12-12 07:33:38] 2025-12-12 12:33:08,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 07:33:38] 2025-12-12 12:33:08,448 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 07:33:38] 2025-12-12 12:33:08,448 | INFO     | update_server=False
[2025-12-12 07:33:38] 2025-12-12 12:33:08,448 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 07:33:38] 2025-12-12 12:33:08,768 | INFO     | all data control threads have been joined
[2025-12-12 07:33:38] 2025-12-12 12:33:08,773 | INFO     | all job control threads have been joined
[2025-12-12 07:33:38] 2025-12-12 12:33:08,822 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 07:33:38] 2025-12-12 12:33:08,823 | INFO     | aborting loop
[2025-12-12 07:33:38] 2025-12-12 12:33:09,276 | INFO     | all payload control threads have been joined
[2025-12-12 07:33:38] 2025-12-12 12:33:09,453 | INFO     | [job] retrieve thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:09,657 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 07:33:38] 2025-12-12 12:33:09,735 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 07:33:38] 2025-12-12 12:33:09,746 | INFO     | [data] copytool_in thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:09,774 | INFO     | [data] control thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:09,779 | INFO     | [job] control thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:09,828 | INFO     | [job] job monitor thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:10,235 | INFO     | [job] validate thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:10,282 | INFO     | [payload] control thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:10,298 | INFO     | [payload] validate_post thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:10,600 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:10,721 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:10,730 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:10,745 | INFO     | [payload] failed_post thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:10,828 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:11,391 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 07:33:38] 2025-12-12 12:33:11,662 | INFO     | [data] copytool_out thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:12,397 | INFO     | [job] queue monitor thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:13,742 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 07:33:38] 2025-12-12 12:33:29,478 | INFO     | [monitor] cgroup control has ended
[2025-12-12 07:33:38] 2025-12-12 12:33:31,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133157136303936)>', '<ExcThread(monitor, started 133156652963584)>']
[2025-12-12 07:33:38] 2025-12-12 12:33:36,032 | INFO     | all workflow threads have been joined
[2025-12-12 07:33:38] 2025-12-12 12:33:36,032 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 07:33:38] 2025-12-12 12:33:36,033 | INFO     | traces error code: 0
[2025-12-12 07:33:38] 2025-12-12 12:33:36,033 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 07:33:38] 2025-12-12 12:33:38,524 | INFO     | PID=646936 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-12 07:33:38] 2025-12-12 12:33:38,524 | INFO     | .. there are 5 such processes running
[2025-12-12 07:33:38] 2025-12-12 12:33:38,524 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 07:33:38] 2025-12-12 12:33:38,524 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 07:33:38] 2025-12-12 12:33:38,524 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 07:33:38] 2025-12-12 12:33:38,524 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 07:33:38] 2025-12-12 12:33:38,524 | INFO     | [monitor] control thread has ended
[2025-12-12 07:33:38] 2025-12-12 12:33:38,700 [wrapper] ==== pilot stdout END ====
[2025-12-12 07:33:38] 2025-12-12 12:33:38,706 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 07:33:38] 2025-12-12 12:33:38,710 [wrapper] pilotpid: 646936
[2025-12-12 07:33:38] 2025-12-12 12:33:38,715 [wrapper] Pilot exit status: 0
[2025-12-12 07:33:38] 2025-12-12 12:33:38,728 [wrapper] pandaids: 6926674850
[2025-12-12 07:33:38] 2025-12-12 12:33:38,786 [wrapper] cleanup supervisor_pilot  977238 646937
[2025-12-12 07:33:38] 2025-12-12 12:33:38,790 [wrapper] Test setup, not cleaning
[2025-12-12 07:33:38] 2025-12-12 12:33:38,793 [wrapper] apfmon messages muted
[2025-12-12 07:33:38] 2025-12-12 12:33:38,797 [wrapper] ==== wrapper stdout END ====
[2025-12-12 07:33:38] 2025-12-12 12:33:38,801 [wrapper] ==== wrapper stderr END ====
[2025-12-12 07:33:38]  *** Error codes and diagnostics ***
[2025-12-12 07:33:38]     "exeErrorCode": 0,
[2025-12-12 07:33:38]     "exeErrorDiag": "",
[2025-12-12 07:33:38]     "pilotErrorCode": 0,
[2025-12-12 07:33:38]     "pilotErrorDiag": "",
[2025-12-12 07:33:38]  *** Listing of results directory ***
[2025-12-12 07:33:38] total 911128
[2025-12-12 07:33:38] -rw-r--r-- 1 whitlerd whitlerd    579449 Dec 11 05:18 pilot3.tar.gz
[2025-12-12 07:33:38] -rwx------ 1 whitlerd whitlerd     36292 Dec 11 05:20 runpilot2-wrapper.sh
[2025-12-12 07:33:38] -rw-r--r-- 1 whitlerd whitlerd      5112 Dec 11 05:20 queuedata.json
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd       100 Dec 11 22:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 07:33:38] -rwxr-xr-x 1 whitlerd whitlerd      7986 Dec 11 22:35 run_atlas
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd       105 Dec 11 22:35 job.xml
[2025-12-12 07:33:38] -rw-r--r-- 2 whitlerd whitlerd 324490472 Dec 11 22:35 EVNT.47866683._000002.pool.root.1
[2025-12-12 07:33:38] drwxrwx--x 2 whitlerd whitlerd      4096 Dec 11 22:35 shared
[2025-12-12 07:33:38] -rw-r--r-- 2 whitlerd whitlerd    592578 Dec 11 22:35 input.tar.gz
[2025-12-12 07:33:38] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 11 22:35 start_atlas.sh
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd      9348 Dec 11 22:35 init_data.xml
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 11 22:35 boinc_setup_complete
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 11 22:35 boinc_lockfile
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd      2842 Dec 11 22:35 pandaJob.out
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd    990114 Dec 11 22:35 agis_schedconf.cvmfs.json
[2025-12-12 07:33:38] drwx------ 5 whitlerd whitlerd      4096 Dec 11 22:35 pilot3
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd       533 Dec 12 07:28 boinc_task_state.xml
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd 592482786 Dec 12 07:32 HITS.47866687._000011.pool.root.1
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd      1044 Dec 12 07:32 memory_monitor_summary.json
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd        95 Dec 12 07:32 pilot_heartbeat.json
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd   1516240 Dec 12 07:32 agis_ddmendpoints.agis.ALL.json
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd   1425849 Dec 12 07:32 log.47866687._000011.job.log.tgz.1
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd     28254 Dec 12 07:33 heartbeat.json
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd      8192 Dec 12 07:33 boinc_mmap_file
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd        29 Dec 12 07:33 wrapper_checkpoint.txt
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd       821 Dec 12 07:33 pilotlog.txt
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd   4603548 Dec 12 07:33 log.47866687._000011.job.log.1
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd       353 Dec 12 07:33 output.list
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd       620 Dec 12 07:33 runtime_log
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd   6072320 Dec 12 07:33 result.tar.gz
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd      9042 Dec 12 07:33 runtime_log.err
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd       656 Dec 12 07:33 i5PKDmmxsn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmV5MKDmvlGXXn.diag
[2025-12-12 07:33:38] -rw-rw-r-- 1 whitlerd whitlerd     21351 Dec 12 07:33 stderr.txt
[2025-12-12 07:33:38] HITS file was successfully produced:
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd 592482786 Dec 12 07:32 shared/HITS.pool.root.1
[2025-12-12 07:33:38]  *** Contents of shared directory: ***
[2025-12-12 07:33:38] total 902024
[2025-12-12 07:33:38] -rw-r--r-- 2 whitlerd whitlerd 324490472 Dec 11 22:35 ATLAS.root_0
[2025-12-12 07:33:38] -rw-r--r-- 2 whitlerd whitlerd    592578 Dec 11 22:35 input.tar.gz
[2025-12-12 07:33:38] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 11 22:35 start_atlas.sh
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd 592482786 Dec 12 07:32 HITS.pool.root.1
[2025-12-12 07:33:38] -rw------- 1 whitlerd whitlerd   6072320 Dec 12 07:33 result.tar.gz
07:33:40 (639441): run_atlas exited; CPU time 127785.694900
07:33:40 (639441): called boinc_finish(0)

</stderr_txt>
]]>

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