Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
22:01:50 (604341): wrapper (7.7.26015): starting
22:01:50 (604341): wrapper: running run_atlas (--nthreads 4)
[2025-12-11 22:01:50] Arguments: --nthreads 4
[2025-12-11 22:01:50] Threads: 4
[2025-12-11 22:01:50] Checking for CVMFS
[2025-12-11 22:01:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-11 22:01:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-11 22:01:51] Running cvmfs_config stat atlas.cern.ch
[2025-12-11 22:01:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-11 22:01:51] 2.13.2.0 15124 772 52060 153907 0 101 3375325 4096001 3333 130560 0 1402319 99.964 120596 2113 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-11 22:01:51] CVMFS is ok
[2025-12-11 22:01:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-11 22:01:51] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-11 22:01:51] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-11 22:01:51] Further information can be found at the LHC@home message board.
[2025-12-11 22:01:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-11 22:01:51] Checking for apptainer binary...
[2025-12-11 22:01:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-11 22:01:51] Running /usr/bin/apptainer --version
[2025-12-11 22:01:51] apptainer version 1.4.3
[2025-12-11 22:01:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-11 22:01:51] Taichi-Ubuntu
[2025-12-11 22:01:51] apptainer works
[2025-12-11 22:01:51] Set ATHENA_PROC_NUMBER=4
[2025-12-11 22:01:51] Set ATHENA_CORE_NUMBER=4
[2025-12-11 22:01:51] Starting ATLAS job with PandaID=6924956721
[2025-12-11 22:01:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-12 06:55:57]  *** The last 200 lines of the pilot log: ***
[2025-12-12 06:55:57] 2025-12-12 11:54:52,189 | INFO     | time since job start (31968s) is within the limit (174528.0s)
[2025-12-12 06:55:57] 2025-12-12 11:54:53,332 | INFO     | monitor loop #2354: job 0:6924956721 is in state 'finished'
[2025-12-12 06:55:57] 2025-12-12 11:54:53,332 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,175 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-12 06:55:57] 2025-12-12 11:54:54,184 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 3254.8458750000004
[2025-12-12 06:55:57] 2025-12-12 11:54:54,192 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/11/PanDA_Pilot-6924956721/memory_monitor_summary.json (trf name=prmon)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,193 | INFO     | extracted standard info from prmon json
[2025-12-12 06:55:57] 2025-12-12 11:54:54,193 | INFO     | extracted standard memory fields from prmon json
[2025-12-12 06:55:57] 2025-12-12 11:54:54,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-12 06:55:57] 2025-12-12 11:54:54,203 | INFO     | fitting pss+swap vs Time
[2025-12-12 06:55:57] 2025-12-12 11:54:54,204 | INFO     | time since job start (31970s) is within the limit (174528.0s)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,205 | INFO     | sum of square deviations: 44613952775.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,213 | INFO     | sum of deviations: 238769405275.5001
[2025-12-12 06:55:57] 2025-12-12 11:54:54,213 | INFO     | mean x: 1765524509.5
[2025-12-12 06:55:57] 2025-12-12 11:54:54,213 | INFO     | mean y: 2617014.639312977
[2025-12-12 06:55:57] 2025-12-12 11:54:54,214 | INFO     | intersect: -9446293268.173754
[2025-12-12 06:55:57] 2025-12-12 11:54:54,214 | INFO     | chi2: 5.267872953618568
[2025-12-12 06:55:57] 2025-12-12 11:54:54,215 | INFO     | sum of square deviations: 43348980220.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,220 | INFO     | sum of deviations: 379116898076.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,220 | INFO     | mean x: 1765524357.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,220 | INFO     | mean y: 2633904.947976879
[2025-12-12 06:55:57] 2025-12-12 11:54:54,220 | INFO     | intersect: -15438101132.104862
[2025-12-12 06:55:57] 2025-12-12 11:54:54,221 | INFO     | chi2: 2.5008931723770305
[2025-12-12 06:55:57] 2025-12-12 11:54:54,221 | INFO     | current chi2=2.5008931723770305 (change=52.525560232823466 %)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,221 | INFO     | sum of square deviations: 42108147652.5
[2025-12-12 06:55:57] 2025-12-12 11:54:54,224 | INFO     | sum of deviations: 375885054178.50006
[2025-12-12 06:55:57] 2025-12-12 11:54:54,224 | INFO     | mean x: 1765524204.5
[2025-12-12 06:55:57] 2025-12-12 11:54:54,225 | INFO     | mean y: 2633504.9046692606
[2025-12-12 06:55:57] 2025-12-12 11:54:54,225 | INFO     | intersect: -15757598142.866121
[2025-12-12 06:55:57] 2025-12-12 11:54:54,225 | INFO     | chi2: 2.4938447540114033
[2025-12-12 06:55:57] 2025-12-12 11:54:54,225 | INFO     | current chi2=2.4938447540114033 (change=0.2818360433575764 %)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,225 | INFO     | right removable region: 513
[2025-12-12 06:55:57] 2025-12-12 11:54:54,226 | INFO     | sum of square deviations: 43348980220.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,229 | INFO     | sum of deviations: 103336663748.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,229 | INFO     | mean x: 1765524662.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,229 | INFO     | mean y: 2633305.645472062
[2025-12-12 06:55:57] 2025-12-12 11:54:54,229 | INFO     | intersect: -4206079965.3467965
[2025-12-12 06:55:57] 2025-12-12 11:54:54,229 | INFO     | chi2: 2.8477279686782575
[2025-12-12 06:55:57] 2025-12-12 11:54:54,229 | INFO     | current chi2=2.8477279686782575 (change=45.94159741984443 %)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,230 | INFO     | sum of square deviations: 42108147652.5
[2025-12-12 06:55:57] 2025-12-12 11:54:54,233 | INFO     | sum of deviations: 101512699484.49992
[2025-12-12 06:55:57] 2025-12-12 11:54:54,233 | INFO     | mean x: 1765524814.5
[2025-12-12 06:55:57] 2025-12-12 11:54:54,233 | INFO     | mean y: 2633527.4299610895
[2025-12-12 06:55:57] 2025-12-12 11:54:54,233 | INFO     | intersect: -4253625650.860569
[2025-12-12 06:55:57] 2025-12-12 11:54:54,234 | INFO     | chi2: 2.8454273529516896
[2025-12-12 06:55:57] 2025-12-12 11:54:54,234 | INFO     | current chi2=2.8454273529516896 (change=0.08078776315266269 %)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,234 | INFO     | left removable region: 20
[2025-12-12 06:55:57] 2025-12-12 11:54:54,234 | INFO     | sum of square deviations: 37155011062.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,237 | INFO     | sum of deviations: 220474948193.00003
[2025-12-12 06:55:57] 2025-12-12 11:54:54,237 | INFO     | mean x: 1765524784.0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,237 | INFO     | mean y: 2652824.1338742394
[2025-12-12 06:55:57] 2025-12-12 11:54:54,237 | INFO     | intersect: -10473834038.87137
[2025-12-12 06:55:57] 2025-12-12 11:54:54,238 | INFO     | chi2: 0.019704822799357265
[2025-12-12 06:55:57] 2025-12-12 11:54:54,238 | INFO     | current memory leak: 5.93 B/s (using 493 data points, chi2=0.02)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | could have reported an average CPU frequency of 3095 MHz (21 samples)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | ..............................
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | . Timing measurements:
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | . get job = 0 s
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | . initial setup = 3 s
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | . payload setup = 11 s
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | . stage-in = 0 s
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | . payload execution = 31923 s
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | . stage-out = 3 s
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | . log creation = 0 s
[2025-12-12 06:55:57] 2025-12-12 11:54:54,239 | INFO     | ..............................
[2025-12-12 06:55:57] 2025-12-12 11:54:54,774 | INFO     | 
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | job summary report
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | --------------------------------------------------
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | PanDA job id: 6924956721
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | task id: 47860601
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | errors: (none)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | pilot state: finished 
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | transexitcode: 0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,775 | INFO     | exeerrorcode: 0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | exeerrordiag: 
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | exitcode: 0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | exitmsg: OK
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | cpuconsumptiontime: 126367 s
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | nevents: 1000
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | neventsw: 0
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | pid: 615711
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | pgrp: 615711
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | corecount: 4
[2025-12-12 06:55:57] 2025-12-12 11:54:54,776 | INFO     | event service: False
[2025-12-12 06:55:57] 2025-12-12 11:54:54,777 | INFO     | sizes: {0: 2284414, 1: 2284613, 6: 2284875, 11: 2284903, 31939: 2343648, 31940: 2343647, 31943: 2352855, 31946: 2352911, 31954: 2353157}
[2025-12-12 06:55:57] 2025-12-12 11:54:54,777 | INFO     | --------------------------------------------------
[2025-12-12 06:55:57] 2025-12-12 11:54:54,777 | INFO     | 
[2025-12-12 06:55:57] 2025-12-12 11:54:54,777 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/11
[2025-12-12 06:55:57] 2025-12-12 11:54:54,805 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,805 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,805 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,805 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,805 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,805 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,805 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,806 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,807 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,807 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,807 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-12 06:55:57] 2025-12-12 11:54:54,807 | INFO     | job 6924956721 has completed (purged errors)
[2025-12-12 06:55:57] 2025-12-12 11:54:54,807 | INFO     | overall cleanup function is called
[2025-12-12 06:55:57] 2025-12-12 11:54:55,825 | INFO     | --- collectZombieJob: --- 10, [615711]
[2025-12-12 06:55:57] 2025-12-12 11:54:55,826 | INFO     | zombie collector waiting for pid 615711
[2025-12-12 06:55:57] 2025-12-12 11:54:55,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-12 06:55:57] 2025-12-12 11:54:55,826 | INFO     | collected zombie processes
[2025-12-12 06:55:57] 2025-12-12 11:54:55,826 | INFO     | will attempt to kill all subprocesses of pid=615711
[2025-12-12 06:55:57] 2025-12-12 11:54:56,142 | INFO     | process IDs to be killed: [615711] (in reverse order)
[2025-12-12 06:55:57] 2025-12-12 11:54:56,232 | WARNING  | found no corresponding commands to process id(s)
[2025-12-12 06:55:57] 2025-12-12 11:54:56,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-12 06:55:57] 2025-12-12 11:54:56,243 | INFO     | did not find any defunct processes belonging to 615711
[2025-12-12 06:55:57] 2025-12-12 11:54:56,254 | INFO     | did not find any defunct processes belonging to 615711
[2025-12-12 06:55:57] 2025-12-12 11:54:56,255 | INFO     | ready for new job
[2025-12-12 06:55:57] 2025-12-12 11:54:56,255 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-12 06:55:57] 2025-12-12 11:54:56,261 | INFO     | ***************************************
[2025-12-12 06:55:57] 2025-12-12 11:54:56,262 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-12 06:55:57] 2025-12-12 11:54:56,262 | INFO     | ***************************************
[2025-12-12 06:55:57] 2025-12-12 11:54:56,262 | INFO     | 
[2025-12-12 06:55:57] 2025-12-12 11:54:56,265 | INFO     | architecture information:
[2025-12-12 06:55:57] 2025-12-12 11:54:56,266 | INFO     | executing command: cat /etc/os-release
[2025-12-12 06:55:57] 2025-12-12 11:54:56,295 | INFO     | cat /etc/os-release:
[2025-12-12 06:55:57] NAME="CentOS Linux"
[2025-12-12 06:55:57] VERSION="7 (Core)"
[2025-12-12 06:55:57] ID="centos"
[2025-12-12 06:55:57] ID_LIKE="rhel fedora"
[2025-12-12 06:55:57] VERSION_ID="7"
[2025-12-12 06:55:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-12 06:55:57] ANSI_COLOR="0;31"
[2025-12-12 06:55:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-12 06:55:57] HOME_URL="https://www.centos.org/"
[2025-12-12 06:55:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-12 06:55:57] 
[2025-12-12 06:55:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-12 06:55:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-12 06:55:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-12 06:55:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-12 06:55:57] 
[2025-12-12 06:55:57] 2025-12-12 11:54:56,296 | INFO     | ***************************************
[2025-12-12 06:55:57] 2025-12-12 11:54:56,799 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/11
[2025-12-12 06:55:57] 2025-12-12 11:54:56,826 | INFO     | sufficient remaining disk space (363803443200 B)
[2025-12-12 06:55:57] 2025-12-12 11:54:56,827 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-12 06:55:57] 2025-12-12 11:54:56,827 | INFO     | current server update state: UPDATING_FINAL
[2025-12-12 06:55:57] 2025-12-12 11:54:56,827 | INFO     | update_server=False
[2025-12-12 06:55:57] 2025-12-12 11:54:56,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-12 06:55:57] 2025-12-12 11:54:56,841 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-12 06:55:57] 2025-12-12 11:54:56,841 | INFO     | aborting loop
[2025-12-12 06:55:57] 2025-12-12 11:54:56,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-12 06:55:57] 2025-12-12 11:54:56,933 | INFO     | all data control threads have been joined
[2025-12-12 06:55:57] 2025-12-12 11:54:57,032 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-12 06:55:57] 2025-12-12 11:54:57,133 | INFO     | all job control threads have been joined
[2025-12-12 06:55:57] 2025-12-12 11:54:57,833 | INFO     | [job] retrieve thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:57,846 | INFO     | [job] job monitor thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:57,940 | INFO     | [data] control thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:58,137 | INFO     | all payload control threads have been joined
[2025-12-12 06:55:57] 2025-12-12 11:54:58,140 | INFO     | [job] control thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:58,211 | INFO     | [payload] failed_post thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:58,382 | INFO     | [data] copytool_in thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:58,732 | INFO     | [job] validate thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:58,898 | INFO     | [payload] validate_post thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:58,954 | INFO     | [payload] execute_payloads thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:58,955 | INFO     | [job] create_data_payload thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:58,979 | INFO     | [payload] validate_pre thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:59,038 | INFO     | [data] copytool_out thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:59,143 | INFO     | [payload] control thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:59,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:54:59,321 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-12 06:55:57] 2025-12-12 11:55:00,326 | INFO     | [job] queue monitor thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:55:00,854 | INFO     | [data] queue_monitor thread has finished
[2025-12-12 06:55:57] 2025-12-12 11:55:27,606 | INFO     | PID=608271 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-12 06:55:57] 2025-12-12 11:55:27,606 | INFO     | .. there are 5 such processes running
[2025-12-12 06:55:57] 2025-12-12 11:55:27,606 | INFO     | found 0 job(s) in 20 queues
[2025-12-12 06:55:57] 2025-12-12 11:55:27,607 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-12 06:55:57] 2025-12-12 11:55:27,607 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-12 06:55:57] 2025-12-12 11:55:50,722 | INFO     | [monitor] cgroup control has ended
[2025-12-12 06:55:57] 2025-12-12 11:55:51,760 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125014435227456)>', '<ExcThread(monitor, started 125013629835008)>']
[2025-12-12 06:55:57] 2025-12-12 11:55:52,727 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-12 06:55:57] 2025-12-12 11:55:52,728 | INFO     | [monitor] control thread has ended
[2025-12-12 06:55:57] 2025-12-12 11:55:56,764 | INFO     | all workflow threads have been joined
[2025-12-12 06:55:57] 2025-12-12 11:55:56,765 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-12 06:55:57] 2025-12-12 11:55:56,765 | INFO     | traces error code: 0
[2025-12-12 06:55:57] 2025-12-12 11:55:56,765 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-12 06:55:57] 2025-12-12 11:55:56,955 [wrapper] ==== pilot stdout END ====
[2025-12-12 06:55:57] 2025-12-12 11:55:56,960 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-12 06:55:57] 2025-12-12 11:55:56,963 [wrapper] pilotpid: 608271
[2025-12-12 06:55:57] 2025-12-12 11:55:56,968 [wrapper] Pilot exit status: 0
[2025-12-12 06:55:57] 2025-12-12 11:55:56,982 [wrapper] pandaids: 6924956721
[2025-12-12 06:55:57] 2025-12-12 11:55:57,054 [wrapper] cleanup supervisor_pilot  943361 608272
[2025-12-12 06:55:57] 2025-12-12 11:55:57,059 [wrapper] Test setup, not cleaning
[2025-12-12 06:55:57] 2025-12-12 11:55:57,064 [wrapper] apfmon messages muted
[2025-12-12 06:55:57] 2025-12-12 11:55:57,068 [wrapper] ==== wrapper stdout END ====
[2025-12-12 06:55:57] 2025-12-12 11:55:57,071 [wrapper] ==== wrapper stderr END ====
[2025-12-12 06:55:57]  *** Error codes and diagnostics ***
[2025-12-12 06:55:57]     "exeErrorCode": 0,
[2025-12-12 06:55:57]     "exeErrorDiag": "",
[2025-12-12 06:55:57]     "pilotErrorCode": 0,
[2025-12-12 06:55:57]     "pilotErrorDiag": "",
[2025-12-12 06:55:57]  *** Listing of results directory ***
[2025-12-12 06:55:57] total 896336
[2025-12-12 06:55:57] -rw-r--r-- 1 whitlerd whitlerd    579449 Dec  9 20:50 pilot3.tar.gz
[2025-12-12 06:55:57] -rwx------ 1 whitlerd whitlerd     36292 Dec  9 20:55 runpilot2-wrapper.sh
[2025-12-12 06:55:57] -rw-r--r-- 1 whitlerd whitlerd      5112 Dec  9 20:55 queuedata.json
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd       100 Dec 11 22:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-12 06:55:57] -rwxr-xr-x 1 whitlerd whitlerd      7986 Dec 11 22:01 run_atlas
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd       105 Dec 11 22:01 job.xml
[2025-12-12 06:55:57] -rw-r--r-- 2 whitlerd whitlerd 318864868 Dec 11 22:01 EVNT.47860599._000006.pool.root.1
[2025-12-12 06:55:57] drwxrwx--x 2 whitlerd whitlerd      4096 Dec 11 22:01 shared
[2025-12-12 06:55:57] -rw-r--r-- 2 whitlerd whitlerd    592579 Dec 11 22:01 input.tar.gz
[2025-12-12 06:55:57] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 11 22:01 start_atlas.sh
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd      9348 Dec 11 22:01 init_data.xml
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 11 22:01 boinc_setup_complete
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd         0 Dec 11 22:01 boinc_lockfile
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd      2858 Dec 11 22:01 pandaJob.out
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd    990101 Dec 11 22:02 agis_schedconf.cvmfs.json
[2025-12-12 06:55:57] drwx------ 5 whitlerd whitlerd      4096 Dec 11 22:02 pilot3
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd       533 Dec 12 06:49 boinc_task_state.xml
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd 583039279 Dec 12 06:54 HITS.47860601._000020.pool.root.1
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd      1043 Dec 12 06:54 memory_monitor_summary.json
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd   1516240 Dec 12 06:54 agis_ddmendpoints.agis.ALL.json
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd   1421541 Dec 12 06:54 log.47860601._000020.job.log.tgz.1
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd     27924 Dec 12 06:54 heartbeat.json
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd        95 Dec 12 06:55 pilot_heartbeat.json
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd      8192 Dec 12 06:55 boinc_mmap_file
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd        29 Dec 12 06:55 wrapper_checkpoint.txt
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd      4838 Dec 12 06:55 pilotlog.txt
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd   4568478 Dec 12 06:55 log.47860601._000020.job.log.1
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd       353 Dec 12 06:55 output.list
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd       620 Dec 12 06:55 runtime_log
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd   6031360 Dec 12 06:55 result.tar.gz
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd      9042 Dec 12 06:55 runtime_log.err
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd       657 Dec 12 06:55 fPeNDmSbOn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDma2MKDmuLANTo.diag
[2025-12-12 06:55:57] -rw-rw-r-- 1 whitlerd whitlerd     21290 Dec 12 06:55 stderr.txt
[2025-12-12 06:55:57] HITS file was successfully produced:
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd 583039279 Dec 12 06:54 shared/HITS.pool.root.1
[2025-12-12 06:55:57]  *** Contents of shared directory: ***
[2025-12-12 06:55:57] total 887264
[2025-12-12 06:55:57] -rw-r--r-- 2 whitlerd whitlerd 318864868 Dec 11 22:01 ATLAS.root_0
[2025-12-12 06:55:57] -rw-r--r-- 2 whitlerd whitlerd    592579 Dec 11 22:01 input.tar.gz
[2025-12-12 06:55:57] -rw-r--r-- 2 whitlerd whitlerd     15847 Dec 11 22:01 start_atlas.sh
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd 583039279 Dec 12 06:54 HITS.pool.root.1
[2025-12-12 06:55:57] -rw------- 1 whitlerd whitlerd   6031360 Dec 12 06:55 result.tar.gz
06:55:58 (604341): run_atlas exited; CPU time 126473.421255
06:55:58 (604341): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN