Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:38:53 (22723): wrapper (7.7.26015): starting
13:38:53 (22723): wrapper: running run_atlas (--nthreads 12)
[2025-12-10 13:38:53] Arguments: --nthreads 12
[2025-12-10 13:38:53] Threads: 12
[2025-12-10 13:38:53] Checking for CVMFS
[2025-12-10 13:39:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-10 13:39:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-10 13:39:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-10 13:39:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-10 13:39:11] 2.13.3.0 22925 0 31388 153842 3 1 5641692 102400001 0 130560 0 0 0.000 1293 266 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-12-10 13:39:11] CVMFS is ok
[2025-12-10 13:39:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-10 13:39:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-10 13:39:11] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-10 13:39:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-10 13:39:11] Further information can be found at the LHC@home message board.
[2025-12-10 13:39:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-10 13:39:11] Checking for apptainer binary...
[2025-12-10 13:39:11] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin)
[2025-12-10 13:39:11] apptainer is not installed, using version from CVMFS
[2025-12-10 13:39:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-10 13:39:12] crocidura-russula
[2025-12-10 13:39:12] apptainer works
[2025-12-10 13:39:12] Set ATHENA_PROC_NUMBER=12
[2025-12-10 13:39:12] Set ATHENA_CORE_NUMBER=12
[2025-12-10 13:39:12] Starting ATLAS job with PandaID=6895350184
[2025-12-10 13:39:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/virtma/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 16:34:31]  *** The last 200 lines of the pilot log: ***
[2025-12-10 16:34:31] 2025-12-10 16:33:57,192 | INFO     | using path: /virtma/boinc/slots/3/PanDA_Pilot-6895350184/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 16:34:31] 2025-12-10 16:33:57,294 | INFO     | number of running child processes to parent process 33938: 1
[2025-12-10 16:34:31] 2025-12-10 16:33:57,294 | INFO     | maximum number of monitored processes: 17
[2025-12-10 16:34:31] 2025-12-10 16:33:58,383 | INFO     | time since job start (10450s) is within the limit (172800.0s)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,207 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-10 16:34:31] 2025-12-10 16:33:59,211 | INFO     | found 24 cores (24 cores per socket, 1 socket) HT, CPU MHz: 4452.940854166666
[2025-12-10 16:34:31] 2025-12-10 16:33:59,217 | INFO     | using path: /virtma/boinc/slots/3/PanDA_Pilot-6895350184/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,217 | INFO     | extracted standard info from prmon json
[2025-12-10 16:34:31] 2025-12-10 16:33:59,217 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 16:34:31] 2025-12-10 16:33:59,217 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 16:34:31] 2025-12-10 16:33:59,219 | INFO     | fitting pss+swap vs Time
[2025-12-10 16:34:31] 2025-12-10 16:33:59,219 | INFO     | sum of square deviations: 1550429070.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,220 | INFO     | sum of deviations: 91380150006.00002
[2025-12-10 16:34:31] 2025-12-10 16:33:59,220 | INFO     | mean x: 1765379194.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,220 | INFO     | mean y: 3533797.1461988306
[2025-12-10 16:34:31] 2025-12-10 16:33:59,220 | INFO     | intersect: -104045479915.6781
[2025-12-10 16:34:31] 2025-12-10 16:33:59,220 | INFO     | chi2: 5.066891810324735
[2025-12-10 16:34:31] 2025-12-10 16:33:59,220 | INFO     | sum of square deviations: 1418361477.5
[2025-12-10 16:34:31] 2025-12-10 16:33:59,221 | INFO     | sum of deviations: 135389766814.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,221 | INFO     | mean x: 1765379041.5
[2025-12-10 16:34:31] 2025-12-10 16:33:59,221 | INFO     | mean y: 3584029.3373493976
[2025-12-10 16:34:31] 2025-12-10 16:33:59,221 | INFO     | intersect: -168510761966.78607
[2025-12-10 16:34:31] 2025-12-10 16:33:59,221 | INFO     | chi2: 2.9900022894002607
[2025-12-10 16:34:31] 2025-12-10 16:33:59,221 | INFO     | current chi2=2.9900022894002607 (change=40.9894191285558 %)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,221 | INFO     | sum of square deviations: 1294014960.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,222 | INFO     | sum of deviations: 127584715554.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,222 | INFO     | mean x: 1765378889.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,222 | INFO     | mean y: 3574456.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,222 | INFO     | intersect: -174055745073.12006
[2025-12-10 16:34:31] 2025-12-10 16:33:59,222 | INFO     | chi2: 2.9930030424000713
[2025-12-10 16:34:31] 2025-12-10 16:33:59,222 | INFO     | current chi2=2.9930030424000713 (change=-0.10035955525681269 %)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,222 | INFO     | right removable region: 160
[2025-12-10 16:34:31] 2025-12-10 16:33:59,222 | INFO     | sum of square deviations: 1418361477.5
[2025-12-10 16:34:31] 2025-12-10 16:33:59,223 | INFO     | sum of deviations: 22520201796.000015
[2025-12-10 16:34:31] 2025-12-10 16:33:59,223 | INFO     | mean x: 1765379346.5
[2025-12-10 16:34:31] 2025-12-10 16:33:59,223 | INFO     | mean y: 3613101.9759036144
[2025-12-10 16:34:31] 2025-12-10 16:33:59,223 | INFO     | intersect: -28026405874.389473
[2025-12-10 16:34:31] 2025-12-10 16:33:59,223 | INFO     | chi2: 2.2238002039713214
[2025-12-10 16:34:31] 2025-12-10 16:33:59,223 | INFO     | current chi2=2.2238002039713214 (change=56.11115675610214 %)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,223 | INFO     | sum of square deviations: 1294014960.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,224 | INFO     | sum of deviations: 12213011787.99999
[2025-12-10 16:34:31] 2025-12-10 16:33:59,224 | INFO     | mean x: 1765379499.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,224 | INFO     | mean y: 3625671.844720497
[2025-12-10 16:34:31] 2025-12-10 16:33:59,224 | INFO     | intersect: -16658160550.148043
[2025-12-10 16:34:31] 2025-12-10 16:33:59,224 | INFO     | chi2: 2.190938060949117
[2025-12-10 16:34:31] 2025-12-10 16:33:59,224 | INFO     | current chi2=2.190938060949117 (change=1.477747099920145 %)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,224 | INFO     | left removable region: 20
[2025-12-10 16:34:31] 2025-12-10 16:33:59,224 | INFO     | sum of square deviations: 850825255.0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,225 | INFO     | sum of deviations: 39845839798.5
[2025-12-10 16:34:31] 2025-12-10 16:33:59,225 | INFO     | mean x: 1765379468.5
[2025-12-10 16:34:31] 2025-12-10 16:33:59,225 | INFO     | mean y: 3689430.807142857
[2025-12-10 16:34:31] 2025-12-10 16:33:59,225 | INFO     | intersect: -82672544110.72316
[2025-12-10 16:34:31] 2025-12-10 16:33:59,225 | INFO     | chi2: 0.014524351016901865
[2025-12-10 16:34:31] 2025-12-10 16:33:59,225 | INFO     | current memory leak: 46.83 B/s (using 140 data points, chi2=0.01)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,225 | INFO     | could have reported an average CPU frequency of 4406 MHz (9 samples)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | ..............................
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | . Timing measurements:
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | . get job = 0 s
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | . initial setup = 5 s
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | . payload setup = 4 s
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | . stage-in = 0 s
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | . payload execution = 10421 s
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | . stage-out = 0 s
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | . log creation = 0 s
[2025-12-10 16:34:31] 2025-12-10 16:33:59,226 | INFO     | ..............................
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | 
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | job summary report
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | --------------------------------------------------
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | PanDA job id: 6895350184
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | task id: 47556137
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | errors: (none)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | pilot state: finished 
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | transexitcode: 0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | exeerrorcode: 0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | exeerrordiag: 
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | exitcode: 0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | exitmsg: OK
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | cpuconsumptiontime: 119620 s
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | nevents: 1000
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | neventsw: 0
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | pid: 33938
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | pgrp: 33938
[2025-12-10 16:34:31] 2025-12-10 16:33:59,438 | INFO     | corecount: 12
[2025-12-10 16:34:31] 2025-12-10 16:33:59,439 | INFO     | event service: False
[2025-12-10 16:34:31] 2025-12-10 16:33:59,439 | INFO     | sizes: {0: 2284263, 2: 2284525, 11: 2284553, 10429: 2314493, 10430: 2323485, 10431: 2323541, 10437: 2323979}
[2025-12-10 16:34:31] 2025-12-10 16:33:59,439 | INFO     | --------------------------------------------------
[2025-12-10 16:34:31] 2025-12-10 16:33:59,439 | INFO     | 
[2025-12-10 16:34:31] 2025-12-10 16:33:59,439 | INFO     | executing command: ls -lF /virtma/boinc/slots/3
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,452 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | job 6895350184 has completed (purged errors)
[2025-12-10 16:34:31] 2025-12-10 16:33:59,453 | INFO     | overall cleanup function is called
[2025-12-10 16:34:31] 2025-12-10 16:34:00,465 | INFO     | --- collectZombieJob: --- 10, [33938]
[2025-12-10 16:34:31] 2025-12-10 16:34:00,465 | INFO     | zombie collector waiting for pid 33938
[2025-12-10 16:34:31] 2025-12-10 16:34:00,465 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 16:34:31] 2025-12-10 16:34:00,465 | INFO     | collected zombie processes
[2025-12-10 16:34:31] 2025-12-10 16:34:00,465 | INFO     | will attempt to kill all subprocesses of pid=33938
[2025-12-10 16:34:31] 2025-12-10 16:34:00,587 | INFO     | process IDs to be killed: [33938] (in reverse order)
[2025-12-10 16:34:31] 2025-12-10 16:34:00,624 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 16:34:31] 2025-12-10 16:34:00,624 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 16:34:31] 2025-12-10 16:34:00,627 | INFO     | did not find any defunct processes belonging to 33938
[2025-12-10 16:34:31] 2025-12-10 16:34:00,630 | INFO     | did not find any defunct processes belonging to 33938
[2025-12-10 16:34:31] 2025-12-10 16:34:00,631 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-10 16:34:31] 2025-12-10 16:34:00,631 | INFO     | ready for new job
[2025-12-10 16:34:31] 2025-12-10 16:34:00,631 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 16:34:31] 2025-12-10 16:34:00,632 | INFO     | ***************************************
[2025-12-10 16:34:31] 2025-12-10 16:34:00,632 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-10 16:34:31] 2025-12-10 16:34:00,632 | INFO     | ***************************************
[2025-12-10 16:34:31] 2025-12-10 16:34:00,632 | INFO     | 
[2025-12-10 16:34:31] 2025-12-10 16:34:00,634 | INFO     | architecture information:
[2025-12-10 16:34:31] 2025-12-10 16:34:00,635 | INFO     | executing command: cat /etc/os-release
[2025-12-10 16:34:31] 2025-12-10 16:34:00,646 | INFO     | cat /etc/os-release:
[2025-12-10 16:34:31] NAME="CentOS Linux"
[2025-12-10 16:34:31] VERSION="7 (Core)"
[2025-12-10 16:34:31] ID="centos"
[2025-12-10 16:34:31] ID_LIKE="rhel fedora"
[2025-12-10 16:34:31] VERSION_ID="7"
[2025-12-10 16:34:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 16:34:31] ANSI_COLOR="0;31"
[2025-12-10 16:34:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 16:34:31] HOME_URL="https://www.centos.org/"
[2025-12-10 16:34:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 16:34:31] 
[2025-12-10 16:34:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 16:34:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 16:34:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 16:34:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 16:34:31] 
[2025-12-10 16:34:31] 2025-12-10 16:34:00,647 | INFO     | ***************************************
[2025-12-10 16:34:31] 2025-12-10 16:34:01,149 | INFO     | executing command: df -mP /virtma/boinc/slots/3
[2025-12-10 16:34:31] 2025-12-10 16:34:01,160 | INFO     | sufficient remaining disk space (942200061952 B)
[2025-12-10 16:34:31] 2025-12-10 16:34:01,160 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 16:34:31] 2025-12-10 16:34:01,160 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 16:34:31] 2025-12-10 16:34:01,160 | INFO     | update_server=False
[2025-12-10 16:34:31] 2025-12-10 16:34:01,160 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 16:34:31] 2025-12-10 16:34:01,160 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 16:34:31] 2025-12-10 16:34:01,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 16:34:31] 2025-12-10 16:34:01,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 16:34:31] 2025-12-10 16:34:01,161 | INFO     | aborting loop
[2025-12-10 16:34:31] 2025-12-10 16:34:01,983 | INFO     | all job control threads have been joined
[2025-12-10 16:34:31] 2025-12-10 16:34:01,986 | INFO     | all payload control threads have been joined
[2025-12-10 16:34:31] 2025-12-10 16:34:02,165 | INFO     | [job] retrieve thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:02,166 | INFO     | [job] queue monitor thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:02,166 | INFO     | [job] job monitor thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:02,186 | INFO     | all data control threads have been joined
[2025-12-10 16:34:31] 2025-12-10 16:34:02,226 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:02,302 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:02,664 | INFO     | [payload] validate_post thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:02,988 | INFO     | [job] control thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:02,991 | INFO     | [payload] control thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:03,116 | INFO     | [data] copytool_in thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:03,166 | INFO     | [data] copytool_out thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:03,182 | INFO     | [payload] failed_post thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:03,191 | INFO     | [data] control thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:03,411 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:03,465 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:03,618 | INFO     | [job] validate thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:03,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 16:34:31] 2025-12-10 16:34:05,609 | INFO     | [monitor] cgroup control has ended
[2025-12-10 16:34:31] 2025-12-10 16:34:07,721 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 16:34:31] 2025-12-10 16:34:09,472 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140013562980160)>', '<ExcThread(monitor, started 140013006202624)>']
[2025-12-10 16:34:31] 2025-12-10 16:34:14,497 | INFO     | all workflow threads have been joined
[2025-12-10 16:34:31] 2025-12-10 16:34:14,498 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 16:34:31] 2025-12-10 16:34:14,498 | INFO     | traces error code: 0
[2025-12-10 16:34:31] 2025-12-10 16:34:14,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 16:34:31] 2025-12-10 16:34:31,566 | INFO     | PID=27181 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-10 16:34:31] 2025-12-10 16:34:31,567 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 16:34:31] 2025-12-10 16:34:31,567 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 16:34:31] 2025-12-10 16:34:31,567 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 16:34:31] 2025-12-10 16:34:31,567 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 16:34:31] 2025-12-10 16:34:31,567 | INFO     | [monitor] control thread has ended
[2025-12-10 16:34:31] 2025-12-10 16:34:31,634 [wrapper] ==== pilot stdout END ====
[2025-12-10 16:34:31] 2025-12-10 16:34:31,636 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 16:34:31] 2025-12-10 16:34:31,638 [wrapper] pilotpid: 27181
[2025-12-10 16:34:31] 2025-12-10 16:34:31,640 [wrapper] Pilot exit status: 0
[2025-12-10 16:34:31] 2025-12-10 16:34:31,646 [wrapper] pandaids: 6895350184
[2025-12-10 16:34:31] 2025-12-10 16:34:31,674 [wrapper] cleanup supervisor_pilot  7806 27182
[2025-12-10 16:34:31] 2025-12-10 16:34:31,676 [wrapper] Test setup, not cleaning
[2025-12-10 16:34:31] 2025-12-10 16:34:31,677 [wrapper] apfmon messages muted
[2025-12-10 16:34:31] 2025-12-10 16:34:31,679 [wrapper] ==== wrapper stdout END ====
[2025-12-10 16:34:31] 2025-12-10 16:34:31,681 [wrapper] ==== wrapper stderr END ====
[2025-12-10 16:34:31]  *** Error codes and diagnostics ***
[2025-12-10 16:34:31]     "exeErrorCode": 0,
[2025-12-10 16:34:31]     "exeErrorDiag": "",
[2025-12-10 16:34:31]     "pilotErrorCode": 0,
[2025-12-10 16:34:31]     "pilotErrorDiag": "",
[2025-12-10 16:34:31]  *** Listing of results directory ***
[2025-12-10 16:34:31] total 1323728
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc      5112 Nov 22 20:39 queuedata.json
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc    576529 Nov 22 20:41 pilot3.tar.gz
[2025-12-10 16:34:31] -rwx------ 1 boinc boinc     36292 Nov 22 20:44 runpilot2-wrapper.sh
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc       100 Dec 10 13:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 16:34:31] -rwxr-xr-x 1 boinc boinc      7986 Dec 10 13:38 run_atlas
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc       105 Dec 10 13:38 job.xml
[2025-12-10 16:34:31] -rw-r--r-- 2 boinc boinc     15847 Dec 10 13:38 start_atlas.sh
[2025-12-10 16:34:31] drwxrwx--x 2 boinc boinc        68 Dec 10 13:38 shared
[2025-12-10 16:34:31] -rw-r--r-- 2 boinc boinc    590104 Dec 10 13:38 input.tar.gz
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc      8918 Dec 10 13:38 init_data.xml
[2025-12-10 16:34:31] -rw-r--r-- 2 boinc boinc 411618108 Dec 10 13:38 EVNT.47483658._000500.pool.root.1
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc         0 Dec 10 13:38 boinc_setup_complete
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc         0 Dec 10 13:38 boinc_lockfile
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc      2785 Dec 10 13:39 pandaJob.out
[2025-12-10 16:34:31] -rw------- 1 boinc boinc    993137 Dec 10 13:39 agis_schedconf.cvmfs.json
[2025-12-10 16:34:31] -rw------- 1 boinc boinc   1516240 Dec 10 13:39 agis_ddmendpoints.agis.ALL.json
[2025-12-10 16:34:31] drwx------ 5 boinc boinc      4096 Dec 10 13:39 pilot3
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc       532 Dec 10 16:29 boinc_task_state.xml
[2025-12-10 16:34:31] -rw------- 1 boinc boinc 933175017 Dec 10 16:33 HITS.47556137._004952.pool.root.1
[2025-12-10 16:34:31] -rw------- 1 boinc boinc      1042 Dec 10 16:33 memory_monitor_summary.json
[2025-12-10 16:34:31] -rw------- 1 boinc boinc   1919687 Dec 10 16:33 log.47556137._004952.job.log.tgz.1
[2025-12-10 16:34:31] -rw------- 1 boinc boinc      8625 Dec 10 16:33 heartbeat.json
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc        29 Dec 10 16:34 wrapper_checkpoint.txt
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc      8192 Dec 10 16:34 boinc_mmap_file
[2025-12-10 16:34:31] -rw------- 1 boinc boinc       745 Dec 10 16:34 pilotlog.txt
[2025-12-10 16:34:31] -rw------- 1 boinc boinc        95 Dec 10 16:34 pilot_heartbeat.json
[2025-12-10 16:34:31] -rw------- 1 boinc boinc   1484076 Dec 10 16:34 log.47556137._004952.job.log.1
[2025-12-10 16:34:31] -rw------- 1 boinc boinc       353 Dec 10 16:34 output.list
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc       620 Dec 10 16:34 runtime_log
[2025-12-10 16:34:31] -rw------- 1 boinc boinc   3420160 Dec 10 16:34 result.tar.gz
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc      8814 Dec 10 16:34 runtime_log.err
[2025-12-10 16:34:31] -rw------- 1 boinc boinc       664 Dec 10 16:34 eJbKDmsd9g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjOKKDmPQfZmn.diag
[2025-12-10 16:34:31] -rw-r--r-- 1 boinc boinc     21531 Dec 10 16:34 stderr.txt
[2025-12-10 16:34:31] HITS file was successfully produced:
[2025-12-10 16:34:31] -rw------- 1 boinc boinc 933175017 Dec 10 16:33 shared/HITS.pool.root.1
[2025-12-10 16:34:31]  *** Contents of shared directory: ***
[2025-12-10 16:34:31] total 1317212
[2025-12-10 16:34:31] -rw-r--r-- 2 boinc boinc     15847 Dec 10 13:38 start_atlas.sh
[2025-12-10 16:34:31] -rw-r--r-- 2 boinc boinc    590104 Dec 10 13:38 input.tar.gz
[2025-12-10 16:34:31] -rw-r--r-- 2 boinc boinc 411618108 Dec 10 13:38 ATLAS.root_0
[2025-12-10 16:34:31] -rw------- 1 boinc boinc 933175017 Dec 10 16:33 HITS.pool.root.1
[2025-12-10 16:34:31] -rw------- 1 boinc boinc   3420160 Dec 10 16:34 result.tar.gz
16:34:33 (22723): run_atlas exited; CPU time 119646.588579
16:34:33 (22723): called boinc_finish(0)

</stderr_txt>
]]>

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