Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:14:09 (23390): wrapper (7.7.26015): starting
06:14:09 (23390): wrapper: running run_atlas (--nthreads 8)
[2025-12-10 06:14:09] Arguments: --nthreads 8
[2025-12-10 06:14:09] Threads: 8
[2025-12-10 06:14:09] Checking for CVMFS
[2025-12-10 06:14:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-10 06:14:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-10 06:14:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-10 06:14:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-10 06:14:10] 2.11.2.0 2787 181637 86408 153838 3 1 20246397 20275201 1 130560 2 70646074 99.945 8088187 24724 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-10 06:14:10] CVMFS is ok
[2025-12-10 06:14:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-10 06:14:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-10 06:14:10] Further information can be found at the LHC@home message board.
[2025-12-10 06:14:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-10 06:14:10] Checking for apptainer binary...
[2025-12-10 06:14:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-10 06:14:10] Running /usr/bin/apptainer --version
[2025-12-10 06:14:10] apptainer version 1.3.2-1.el7
[2025-12-10 06:14:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-10 06:14:12] c-115-2.aglt2.org
[2025-12-10 06:14:12] apptainer works
[2025-12-10 06:14:12] Set ATHENA_PROC_NUMBER=8
[2025-12-10 06:14:12] Set ATHENA_CORE_NUMBER=8
[2025-12-10 06:14:12] Starting ATLAS job with PandaID=6925385056
[2025-12-10 06:14:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 13:24:19]  *** The last 200 lines of the pilot log: ***
[2025-12-10 13:24:19] 2025-12-10 18:23:28,165 | INFO     | time since job start (25737s) is within the limit (174528.0s)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,297 | INFO     | monitor loop #1887: job 0:6925385056 is in state 'finished'
[2025-12-10 13:24:19] 2025-12-10 18:23:29,298 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,790 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-10 13:24:19] 2025-12-10 18:23:29,794 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1812.25
[2025-12-10 13:24:19] 2025-12-10 18:23:29,796 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6925385056/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,796 | INFO     | extracted standard info from prmon json
[2025-12-10 13:24:19] 2025-12-10 18:23:29,797 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 13:24:19] 2025-12-10 18:23:29,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 13:24:19] 2025-12-10 18:23:29,804 | INFO     | fitting pss+swap vs Time
[2025-12-10 13:24:19] 2025-12-10 18:23:29,805 | INFO     | sum of square deviations: 23302985405.867287
[2025-12-10 13:24:19] 2025-12-10 18:23:29,808 | INFO     | sum of deviations: 244081685088.47876
[2025-12-10 13:24:19] 2025-12-10 18:23:29,809 | INFO     | mean x: 1765378149.92891
[2025-12-10 13:24:19] 2025-12-10 18:23:29,809 | INFO     | mean y: 3606167.6492890995
[2025-12-10 13:24:19] 2025-12-10 18:23:29,809 | INFO     | intersect: -18487435479.938805
[2025-12-10 13:24:19] 2025-12-10 18:23:29,809 | INFO     | chi2: 6.1969403892190575
[2025-12-10 13:24:19] 2025-12-10 18:23:29,810 | INFO     | sum of square deviations: 22484504332.436527
[2025-12-10 13:24:19] 2025-12-10 18:23:29,813 | INFO     | sum of deviations: 420204675745.45996
[2025-12-10 13:24:19] 2025-12-10 18:23:29,813 | INFO     | mean x: 1765377997.4340527
[2025-12-10 13:24:19] 2025-12-10 18:23:29,814 | INFO     | mean y: 3638935.798561151
[2025-12-10 13:24:19] 2025-12-10 18:23:29,814 | INFO     | intersect: -32988864612.958054
[2025-12-10 13:24:19] 2025-12-10 18:23:29,814 | INFO     | chi2: 2.9943449989871653
[2025-12-10 13:24:19] 2025-12-10 18:23:29,814 | INFO     | current chi2=2.9943449989871653 (change=51.680267827063695 %)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,815 | INFO     | sum of square deviations: 21685418971.482956
[2025-12-10 13:24:19] 2025-12-10 18:23:29,818 | INFO     | sum of deviations: 458743076635.8855
[2025-12-10 13:24:19] 2025-12-10 18:23:29,818 | INFO     | mean x: 1765377844.9393203
[2025-12-10 13:24:19] 2025-12-10 18:23:29,818 | INFO     | mean y: 3646243.235436893
[2025-12-10 13:24:19] 2025-12-10 18:23:29,819 | INFO     | intersect: -37341948281.69761
[2025-12-10 13:24:19] 2025-12-10 18:23:29,819 | INFO     | chi2: 2.6532636652765915
[2025-12-10 13:24:19] 2025-12-10 18:23:29,819 | INFO     | current chi2=2.6532636652765915 (change=11.390849545591584 %)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,819 | INFO     | right removable region: 411
[2025-12-10 13:24:19] 2025-12-10 18:23:29,820 | INFO     | sum of square deviations: 22484393922.43651
[2025-12-10 13:24:19] 2025-12-10 18:23:29,823 | INFO     | sum of deviations: 90252873975.92102
[2025-12-10 13:24:19] 2025-12-10 18:23:29,823 | INFO     | mean x: 1765378302.4340527
[2025-12-10 13:24:19] 2025-12-10 18:23:29,823 | INFO     | mean y: 3634749.5971223023
[2025-12-10 13:24:19] 2025-12-10 18:23:29,824 | INFO     | intersect: -7082634331.039062
[2025-12-10 13:24:19] 2025-12-10 18:23:29,824 | INFO     | chi2: 3.6711469199126316
[2025-12-10 13:24:19] 2025-12-10 18:23:29,824 | INFO     | current chi2=3.6711469199126316 (change=40.7587181845512 %)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,825 | INFO     | sum of square deviations: 21685198151.48298
[2025-12-10 13:24:19] 2025-12-10 18:23:29,828 | INFO     | sum of deviations: 62923654625.77685
[2025-12-10 13:24:19] 2025-12-10 18:23:29,828 | INFO     | mean x: 1765378454.9393203
[2025-12-10 13:24:19] 2025-12-10 18:23:29,828 | INFO     | mean y: 3639957.631067961
[2025-12-10 13:24:19] 2025-12-10 18:23:29,828 | INFO     | intersect: -5118935515.574496
[2025-12-10 13:24:19] 2025-12-10 18:23:29,829 | INFO     | chi2: 3.626861754040428
[2025-12-10 13:24:19] 2025-12-10 18:23:29,829 | INFO     | current chi2=3.626861754040428 (change=1.2063032844585082 %)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,829 | INFO     | left removable region: 20
[2025-12-10 13:24:19] 2025-12-10 18:23:29,830 | INFO     | sum of square deviations: 18535493402.56778
[2025-12-10 13:24:19] 2025-12-10 18:23:29,833 | INFO     | sum of deviations: 241599751227.05637
[2025-12-10 13:24:19] 2025-12-10 18:23:29,833 | INFO     | mean x: 1765378424.4450128
[2025-12-10 13:24:19] 2025-12-10 18:23:29,833 | INFO     | mean y: 3688588.746803069
[2025-12-10 13:24:19] 2025-12-10 18:23:29,833 | INFO     | intersect: -23007028142.885567
[2025-12-10 13:24:19] 2025-12-10 18:23:29,834 | INFO     | chi2: 0.015643574428134504
[2025-12-10 13:24:19] 2025-12-10 18:23:29,834 | INFO     | current memory leak: 13.03 B/s (using 391 data points, chi2=0.02)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,834 | INFO     | could have reported an average CPU frequency of 2301 MHz (18 samples)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,834 | INFO     | ..............................
[2025-12-10 13:24:19] 2025-12-10 18:23:29,834 | INFO     | . Timing measurements:
[2025-12-10 13:24:19] 2025-12-10 18:23:29,834 | INFO     | . get job = 0 s
[2025-12-10 13:24:19] 2025-12-10 18:23:29,835 | INFO     | . initial setup = 2 s
[2025-12-10 13:24:19] 2025-12-10 18:23:29,835 | INFO     | . payload setup = 15 s
[2025-12-10 13:24:19] 2025-12-10 18:23:29,835 | INFO     | . stage-in = 0 s
[2025-12-10 13:24:19] 2025-12-10 18:23:29,835 | INFO     | . payload execution = 25686 s
[2025-12-10 13:24:19] 2025-12-10 18:23:29,835 | INFO     | . stage-out = 2 s
[2025-12-10 13:24:19] 2025-12-10 18:23:29,835 | INFO     | . log creation = 0 s
[2025-12-10 13:24:19] 2025-12-10 18:23:29,835 | INFO     | ..............................
[2025-12-10 13:24:19] 2025-12-10 18:23:29,917 | INFO     | 
[2025-12-10 13:24:19] 2025-12-10 18:23:29,917 | INFO     | job summary report
[2025-12-10 13:24:19] 2025-12-10 18:23:29,918 | INFO     | --------------------------------------------------
[2025-12-10 13:24:19] 2025-12-10 18:23:29,918 | INFO     | PanDA job id: 6925385056
[2025-12-10 13:24:19] 2025-12-10 18:23:29,918 | INFO     | task id: 47860572
[2025-12-10 13:24:19] 2025-12-10 18:23:29,918 | INFO     | errors: (none)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,918 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 13:24:19] 2025-12-10 18:23:29,918 | INFO     | pilot state: finished 
[2025-12-10 13:24:19] 2025-12-10 18:23:29,919 | INFO     | transexitcode: 0
[2025-12-10 13:24:19] 2025-12-10 18:23:29,919 | INFO     | exeerrorcode: 0
[2025-12-10 13:24:19] 2025-12-10 18:23:29,919 | INFO     | exeerrordiag: 
[2025-12-10 13:24:19] 2025-12-10 18:23:29,919 | INFO     | exitcode: 0
[2025-12-10 13:24:19] 2025-12-10 18:23:29,919 | INFO     | exitmsg: OK
[2025-12-10 13:24:19] 2025-12-10 18:23:29,919 | INFO     | cpuconsumptiontime: 198442 s
[2025-12-10 13:24:19] 2025-12-10 18:23:29,920 | INFO     | nevents: 1000
[2025-12-10 13:24:19] 2025-12-10 18:23:29,920 | INFO     | neventsw: 0
[2025-12-10 13:24:19] 2025-12-10 18:23:29,920 | INFO     | pid: 2308
[2025-12-10 13:24:19] 2025-12-10 18:23:29,920 | INFO     | pgrp: 2308
[2025-12-10 13:24:19] 2025-12-10 18:23:29,920 | INFO     | corecount: 8
[2025-12-10 13:24:19] 2025-12-10 18:23:29,920 | INFO     | event service: False
[2025-12-10 13:24:19] 2025-12-10 18:23:29,921 | INFO     | sizes: {0: 2284291, 1: 2284546, 7: 2284808, 12: 2284836, 25706: 2341184, 25709: 2350178, 25711: 2350362, 25722: 2350696}
[2025-12-10 13:24:19] 2025-12-10 18:23:29,921 | INFO     | --------------------------------------------------
[2025-12-10 13:24:19] 2025-12-10 18:23:29,921 | INFO     | 
[2025-12-10 13:24:19] 2025-12-10 18:23:29,921 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-10 13:24:19] 2025-12-10 18:23:29,949 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,949 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,950 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,950 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,950 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 13:24:19] 2025-12-10 18:23:29,953 | INFO     | job 6925385056 has completed (purged errors)
[2025-12-10 13:24:19] 2025-12-10 18:23:29,953 | INFO     | overall cleanup function is called
[2025-12-10 13:24:19] 2025-12-10 18:23:30,969 | INFO     | --- collectZombieJob: --- 10, [2308]
[2025-12-10 13:24:19] 2025-12-10 18:23:30,969 | INFO     | zombie collector waiting for pid 2308
[2025-12-10 13:24:19] 2025-12-10 18:23:30,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 13:24:19] 2025-12-10 18:23:30,969 | INFO     | collected zombie processes
[2025-12-10 13:24:19] 2025-12-10 18:23:30,970 | INFO     | will attempt to kill all subprocesses of pid=2308
[2025-12-10 13:24:19] 2025-12-10 18:23:31,055 | INFO     | process IDs to be killed: [2308] (in reverse order)
[2025-12-10 13:24:19] 2025-12-10 18:23:31,110 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 13:24:19] 2025-12-10 18:23:31,110 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 13:24:19] 2025-12-10 18:23:31,115 | INFO     | did not find any defunct processes belonging to 2308
[2025-12-10 13:24:19] 2025-12-10 18:23:31,117 | INFO     | did not find any defunct processes belonging to 2308
[2025-12-10 13:24:19] 2025-12-10 18:23:31,117 | INFO     | ready for new job
[2025-12-10 13:24:19] 2025-12-10 18:23:31,118 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 13:24:19] 2025-12-10 18:23:31,120 | INFO     | ***************************************
[2025-12-10 13:24:19] 2025-12-10 18:23:31,120 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-10 13:24:19] 2025-12-10 18:23:31,120 | INFO     | ***************************************
[2025-12-10 13:24:19] 2025-12-10 18:23:31,120 | INFO     | 
[2025-12-10 13:24:19] 2025-12-10 18:23:31,121 | INFO     | architecture information:
[2025-12-10 13:24:19] 2025-12-10 18:23:31,121 | INFO     | executing command: cat /etc/os-release
[2025-12-10 13:24:19] 2025-12-10 18:23:31,140 | INFO     | cat /etc/os-release:
[2025-12-10 13:24:19] NAME="CentOS Linux"
[2025-12-10 13:24:19] VERSION="7 (Core)"
[2025-12-10 13:24:19] ID="centos"
[2025-12-10 13:24:19] ID_LIKE="rhel fedora"
[2025-12-10 13:24:19] VERSION_ID="7"
[2025-12-10 13:24:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 13:24:19] ANSI_COLOR="0;31"
[2025-12-10 13:24:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 13:24:19] HOME_URL="https://www.centos.org/"
[2025-12-10 13:24:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 13:24:19] 
[2025-12-10 13:24:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 13:24:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 13:24:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 13:24:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 13:24:19] 
[2025-12-10 13:24:19] 2025-12-10 18:23:31,141 | INFO     | ***************************************
[2025-12-10 13:24:19] 2025-12-10 18:23:31,644 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-10 13:24:19] 2025-12-10 18:23:31,664 | INFO     | sufficient remaining disk space (17976786944 B)
[2025-12-10 13:24:19] 2025-12-10 18:23:31,665 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 13:24:19] 2025-12-10 18:23:31,665 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 13:24:19] 2025-12-10 18:23:31,665 | INFO     | update_server=False
[2025-12-10 13:24:19] 2025-12-10 18:23:31,666 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 13:24:19] 2025-12-10 18:23:31,666 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 13:24:19] 2025-12-10 18:23:31,669 | INFO     | all job control threads have been joined
[2025-12-10 13:24:19] 2025-12-10 18:23:31,801 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-10 13:24:19] 2025-12-10 18:23:31,801 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-10 13:24:19] 2025-12-10 18:23:31,802 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 13:24:19] 2025-12-10 18:23:31,802 | INFO     | will abort loop
[2025-12-10 13:24:19] 2025-12-10 18:23:31,980 | INFO     | all data control threads have been joined
[2025-12-10 13:24:19] 2025-12-10 18:23:32,287 | INFO     | all payload control threads have been joined
[2025-12-10 13:24:19] 2025-12-10 18:23:32,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 13:24:19] 2025-12-10 18:23:32,671 | INFO     | [job] retrieve thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:32,672 | INFO     | [job] control thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:32,672 | INFO     | [job] queue monitor thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:32,674 | INFO     | [payload] failed_post thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:32,807 | INFO     | [job] job monitor thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:32,958 | INFO     | [data] copytool_in thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:32,961 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:32,971 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:32,986 | INFO     | [data] control thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:33,000 | INFO     | [job] validate thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:33,177 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:33,293 | INFO     | [payload] control thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:33,741 | INFO     | [payload] validate_post thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:33,952 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:34,237 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 13:24:19] 2025-12-10 18:23:34,544 | INFO     | [data] copytool_out thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:23:38,243 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 13:24:19] 2025-12-10 18:24:01,306 | INFO     | PID=27517 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-10 13:24:19] 2025-12-10 18:24:01,306 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 13:24:19] 2025-12-10 18:24:01,306 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 13:24:19] 2025-12-10 18:24:01,306 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 13:24:19] 2025-12-10 18:24:13,429 | INFO     | [monitor] cgroup control has ended
[2025-12-10 13:24:19] 2025-12-10 18:24:14,430 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660354070336)>', '<ExcThread(monitor, started 140659172308736)>']
[2025-12-10 13:24:19] 2025-12-10 18:24:15,378 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 13:24:19] 2025-12-10 18:24:15,379 | INFO     | [monitor] control thread has ended
[2025-12-10 13:24:19] 2025-12-10 18:24:19,455 | INFO     | all workflow threads have been joined
[2025-12-10 13:24:19] 2025-12-10 18:24:19,456 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 13:24:19] 2025-12-10 18:24:19,456 | INFO     | traces error code: 0
[2025-12-10 13:24:19] 2025-12-10 18:24:19,456 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 13:24:19] 2025-12-10 18:24:19,568 [wrapper] ==== pilot stdout END ====
[2025-12-10 13:24:19] 2025-12-10 18:24:19,573 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 13:24:19] 2025-12-10 18:24:19,577 [wrapper] pilotpid: 27517
[2025-12-10 13:24:19] 2025-12-10 18:24:19,582 [wrapper] Pilot exit status: 0
[2025-12-10 13:24:19] 2025-12-10 18:24:19,599 [wrapper] pandaids: 6925385056
[2025-12-10 13:24:19] 2025-12-10 18:24:19,653 [wrapper] cleanup supervisor_pilot  8958 27518
[2025-12-10 13:24:19] 2025-12-10 18:24:19,658 [wrapper] Test setup, not cleaning
[2025-12-10 13:24:19] 2025-12-10 18:24:19,663 [wrapper] apfmon messages muted
[2025-12-10 13:24:19] 2025-12-10 18:24:19,668 [wrapper] ==== wrapper stdout END ====
[2025-12-10 13:24:19] 2025-12-10 18:24:19,674 [wrapper] ==== wrapper stderr END ====
[2025-12-10 13:24:19]  *** Error codes and diagnostics ***
[2025-12-10 13:24:19]     "exeErrorCode": 0,
[2025-12-10 13:24:19]     "exeErrorDiag": "",
[2025-12-10 13:24:19]     "pilotErrorCode": 0,
[2025-12-10 13:24:19]     "pilotErrorDiag": "",
[2025-12-10 13:24:19]  *** Listing of results directory ***
[2025-12-10 13:24:19] total 904704
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas    579449 Dec 10 05:37 pilot3.tar.gz
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas      5112 Dec 10 06:11 queuedata.json
[2025-12-10 13:24:19] -rwx------ 1 boincer umatlas     36292 Dec 10 06:13 runpilot2-wrapper.sh
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas       100 Dec 10 06:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 13:24:19] -rwxr-xr-x 1 boincer umatlas      7986 Dec 10 06:14 run_atlas
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas       105 Dec 10 06:14 job.xml
[2025-12-10 13:24:19] -rw-r--r-- 2 boincer umatlas 318799690 Dec 10 06:14 EVNT.47860570._000001.pool.root.1
[2025-12-10 13:24:19] -rw-r--r-- 2 boincer umatlas     15847 Dec 10 06:14 start_atlas.sh
[2025-12-10 13:24:19] drwxrwx--x 2 boincer umatlas      4096 Dec 10 06:14 shared
[2025-12-10 13:24:19] -rw-r--r-- 2 boincer umatlas    592577 Dec 10 06:14 input.tar.gz
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas         0 Dec 10 06:14 boinc_lockfile
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas      2819 Dec 10 06:14 pandaJob.out
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas        57 Dec 10 06:14 setup.sh.local
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas    993375 Dec 10 06:14 agis_schedconf.cvmfs.json
[2025-12-10 13:24:19] drwx------ 5 boincer umatlas      4096 Dec 10 06:14 pilot3
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas       533 Dec 10 13:14 boinc_task_state.xml
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas      5910 Dec 10 13:18 init_data.xml
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas 592904604 Dec 10 13:22 HITS.47860572._000010.pool.root.1
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas      1063 Dec 10 13:23 memory_monitor_summary.json
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas   1516240 Dec 10 13:23 agis_ddmendpoints.agis.ALL.json
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas   1806363 Dec 10 13:23 log.47860572._000010.job.log.tgz.1
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas        95 Dec 10 13:23 pilot_heartbeat.json
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas     28091 Dec 10 13:23 heartbeat.json
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas      8192 Dec 10 13:24 boinc_mmap_file
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas        29 Dec 10 13:24 wrapper_checkpoint.txt
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas      4932 Dec 10 13:24 pilotlog.txt
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas   3566176 Dec 10 13:24 log.47860572._000010.job.log.1
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas       353 Dec 10 13:24 output.list
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas       620 Dec 10 13:24 runtime_log
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas   5416960 Dec 10 13:24 result.tar.gz
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas      9338 Dec 10 13:24 runtime_log.err
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas       666 Dec 10 13:24 fbCODmVJXn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0cQKDmNUxDJo.diag
[2025-12-10 13:24:19] -rw-r--r-- 1 boincer umatlas     21197 Dec 10 13:24 stderr.txt
[2025-12-10 13:24:19] HITS file was successfully produced:
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas 592904604 Dec 10 13:22 shared/HITS.pool.root.1
[2025-12-10 13:24:19]  *** Contents of shared directory: ***
[2025-12-10 13:24:19] total 896232
[2025-12-10 13:24:19] -rw-r--r-- 2 boincer umatlas 318799690 Dec 10 06:14 ATLAS.root_0
[2025-12-10 13:24:19] -rw-r--r-- 2 boincer umatlas     15847 Dec 10 06:14 start_atlas.sh
[2025-12-10 13:24:19] -rw-r--r-- 2 boincer umatlas    592577 Dec 10 06:14 input.tar.gz
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas 592904604 Dec 10 13:22 HITS.pool.root.1
[2025-12-10 13:24:19] -rw------- 1 boincer umatlas   5416960 Dec 10 13:24 result.tar.gz
13:24:21 (23390): run_atlas exited; CPU time 196794.570732
13:24:21 (23390): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN