Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:45:21 (21091): wrapper (7.7.26015): starting
12:45:21 (21091): wrapper: running run_atlas (--nthreads 8)
[2025-12-09 12:45:21] Arguments: --nthreads 8
[2025-12-09 12:45:21] Threads: 8
[2025-12-09 12:45:21] Checking for CVMFS
[2025-12-09 12:45:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 12:45:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 12:45:22] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 12:45:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 12:45:22] 2.11.2.0 2797 84751 87788 153813 1 1 16608309 20275201 1 130560 0 21806247 99.852 4823742 31579 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-09 12:45:22] CVMFS is ok
[2025-12-09 12:45:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 12:45:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-09 12:45:22] Further information can be found at the LHC@home message board.
[2025-12-09 12:45:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 12:45:22] Checking for apptainer binary...
[2025-12-09 12:45:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-09 12:45:22] Running /usr/bin/apptainer --version
[2025-12-09 12:45:22] apptainer version 1.3.2-1.el7
[2025-12-09 12:45:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 12:45:24] c-204-11.aglt2.org
[2025-12-09 12:45:24] apptainer works
[2025-12-09 12:45:24] Set ATHENA_PROC_NUMBER=8
[2025-12-09 12:45:24] Set ATHENA_CORE_NUMBER=8
[2025-12-09 12:45:24] Starting ATLAS job with PandaID=6924498315
[2025-12-09 12:45:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 16:07:11]  *** The last 200 lines of the pilot log: ***
[2025-12-09 16:07:11] 2025-12-09 21:06:17,415 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-12-09 16:07:11] 2025-12-09 21:06:18,013 | INFO     | time since job start (12034s) is within the limit (174528.0s)
[2025-12-09 16:07:11] 2025-12-09 21:06:19,147 | INFO     | PID=25134 has CPU usage=7.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-09 16:07:11] 2025-12-09 21:06:19,450 | INFO     | monitor loop #883: job 0:6924498315 is in state 'finished'
[2025-12-09 16:07:11] 2025-12-09 21:06:19,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-09 16:07:11] 2025-12-09 21:06:20,148 | INFO     | time since job start (12036s) is within the limit (174528.0s)
[2025-12-09 16:07:11] 2025-12-09 21:06:21,961 | INFO     | monitor loop #884: job 0:6924498315 is in state 'finished'
[2025-12-09 16:07:11] 2025-12-09 21:06:21,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-09 16:07:11] 2025-12-09 21:06:22,154 | INFO     | time since job start (12038s) is within the limit (174528.0s)
[2025-12-09 16:07:11] 2025-12-09 21:06:22,860 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-09 16:07:11] 2025-12-09 21:06:22,864 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1712.5
[2025-12-09 16:07:11] 2025-12-09 21:06:22,866 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6924498315/memory_monitor_summary.json (trf name=prmon)
[2025-12-09 16:07:11] 2025-12-09 21:06:22,867 | INFO     | extracted standard info from prmon json
[2025-12-09 16:07:11] 2025-12-09 21:06:22,868 | INFO     | extracted standard memory fields from prmon json
[2025-12-09 16:07:11] 2025-12-09 21:06:22,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-09 16:07:11] 2025-12-09 21:06:22,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-09 16:07:11] 2025-12-09 21:06:22,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-09 16:07:11] 2025-12-09 21:06:22,873 | INFO     | fitting pss+swap vs Time
[2025-12-09 16:07:11] 2025-12-09 21:06:22,873 | INFO     | sum of square deviations: 2370641658.0
[2025-12-09 16:07:11] 2025-12-09 21:06:22,874 | INFO     | sum of deviations: 6099561410.000004
[2025-12-09 16:07:11] 2025-12-09 21:06:22,874 | INFO     | mean x: 1765308354.0
[2025-12-09 16:07:11] 2025-12-09 21:06:22,874 | INFO     | mean y: 2546999.7969543147
[2025-12-09 16:07:11] 2025-12-09 21:06:22,875 | INFO     | intersect: -4539517245.329471
[2025-12-09 16:07:11] 2025-12-09 21:06:22,875 | INFO     | chi2: 1.5856441224514624
[2025-12-09 16:07:11] 2025-12-09 21:06:22,875 | INFO     | sum of square deviations: 2194675568.0
[2025-12-09 16:07:11] 2025-12-09 21:06:22,876 | INFO     | sum of deviations: 5770880447.5
[2025-12-09 16:07:11] 2025-12-09 21:06:22,876 | INFO     | mean x: 1765308201.5
[2025-12-09 16:07:11] 2025-12-09 21:06:22,877 | INFO     | mean y: 2546714.890625
[2025-12-09 16:07:11] 2025-12-09 21:06:22,877 | INFO     | intersect: -4639315951.458491
[2025-12-09 16:07:11] 2025-12-09 21:06:22,877 | INFO     | chi2: 1.5858919487788363
[2025-12-09 16:07:11] 2025-12-09 21:06:22,877 | INFO     | current chi2=1.5858919487788363 (change=-0.0156293788666034 %)
[2025-12-09 16:07:11] 2025-12-09 21:06:22,877 | INFO     | right removable region: 191
[2025-12-09 16:07:11] 2025-12-09 21:06:22,878 | INFO     | sum of square deviations: 2194675568.0
[2025-12-09 16:07:11] 2025-12-09 21:06:22,879 | INFO     | sum of deviations: -23825309270.5
[2025-12-09 16:07:11] 2025-12-09 21:06:22,879 | INFO     | mean x: 1765308506.5
[2025-12-09 16:07:11] 2025-12-09 21:06:22,879 | INFO     | mean y: 2572630.796875
[2025-12-09 16:07:11] 2025-12-09 21:06:22,879 | INFO     | intersect: 19166690434.11083
[2025-12-09 16:07:11] 2025-12-09 21:06:22,879 | INFO     | chi2: 0.15547827832127317
[2025-12-09 16:07:11] 2025-12-09 21:06:22,880 | INFO     | current chi2=0.15547827832127317 (change=90.19462967006126 %)
[2025-12-09 16:07:11] 2025-12-09 21:06:22,880 | INFO     | sum of square deviations: 2027639878.0
[2025-12-09 16:07:11] 2025-12-09 21:06:22,881 | INFO     | sum of deviations: -22979099122.999996
[2025-12-09 16:07:11] 2025-12-09 21:06:22,881 | INFO     | mean x: 1765308659.0
[2025-12-09 16:07:11] 2025-12-09 21:06:22,881 | INFO     | mean y: 2571803.8770053475
[2025-12-09 16:07:11] 2025-12-09 21:06:22,881 | INFO     | intersect: 20008689802.435722
[2025-12-09 16:07:11] 2025-12-09 21:06:22,882 | INFO     | chi2: 0.13736751086526622
[2025-12-09 16:07:11] 2025-12-09 21:06:22,882 | INFO     | current chi2=0.13736751086526622 (change=11.648422951136427 %)
[2025-12-09 16:07:11] 2025-12-09 21:06:22,882 | INFO     | left removable region: 20
[2025-12-09 16:07:11] 2025-12-09 21:06:22,882 | INFO     | sum of square deviations: 1550429070.0
[2025-12-09 16:07:11] 2025-12-09 21:06:22,883 | INFO     | sum of deviations: -10444510036.000002
[2025-12-09 16:07:11] 2025-12-09 21:06:22,883 | INFO     | mean x: 1765308781.0
[2025-12-09 16:07:11] 2025-12-09 21:06:22,883 | INFO     | mean y: 2559461.374269006
[2025-12-09 16:07:11] 2025-12-09 21:06:22,883 | INFO     | intersect: 11894612852.629007
[2025-12-09 16:07:11] 2025-12-09 21:06:22,884 | INFO     | chi2: 0.09241715545268483
[2025-12-09 16:07:11] 2025-12-09 21:06:22,884 | INFO     | current memory leak: -6.74 B/s (using 171 data points, chi2=0.09)
[2025-12-09 16:07:11] 2025-12-09 21:06:22,884 | INFO     | could have reported an average CPU frequency of 2052 MHz (10 samples)
[2025-12-09 16:07:11] 2025-12-09 21:06:22,885 | INFO     | ..............................
[2025-12-09 16:07:11] 2025-12-09 21:06:22,885 | INFO     | . Timing measurements:
[2025-12-09 16:07:11] 2025-12-09 21:06:22,885 | INFO     | . get job = 0 s
[2025-12-09 16:07:11] 2025-12-09 21:06:22,885 | INFO     | . initial setup = 2 s
[2025-12-09 16:07:11] 2025-12-09 21:06:22,885 | INFO     | . payload setup = 8 s
[2025-12-09 16:07:11] 2025-12-09 21:06:22,885 | INFO     | . stage-in = 0 s
[2025-12-09 16:07:11] 2025-12-09 21:06:22,885 | INFO     | . payload execution = 12001 s
[2025-12-09 16:07:11] 2025-12-09 21:06:22,885 | INFO     | . stage-out = 2 s
[2025-12-09 16:07:11] 2025-12-09 21:06:22,886 | INFO     | . log creation = 0 s
[2025-12-09 16:07:11] 2025-12-09 21:06:22,886 | INFO     | ..............................
[2025-12-09 16:07:11] 2025-12-09 21:06:23,192 | INFO     | 
[2025-12-09 16:07:11] 2025-12-09 21:06:23,192 | INFO     | job summary report
[2025-12-09 16:07:11] 2025-12-09 21:06:23,193 | INFO     | --------------------------------------------------
[2025-12-09 16:07:11] 2025-12-09 21:06:23,193 | INFO     | PanDA job id: 6924498315
[2025-12-09 16:07:11] 2025-12-09 21:06:23,193 | INFO     | task id: 47838378
[2025-12-09 16:07:11] 2025-12-09 21:06:23,193 | INFO     | errors: (none)
[2025-12-09 16:07:11] 2025-12-09 21:06:23,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 16:07:11] 2025-12-09 21:06:23,193 | INFO     | pilot state: finished 
[2025-12-09 16:07:11] 2025-12-09 21:06:23,194 | INFO     | transexitcode: 0
[2025-12-09 16:07:11] 2025-12-09 21:06:23,194 | INFO     | exeerrorcode: 0
[2025-12-09 16:07:11] 2025-12-09 21:06:23,194 | INFO     | exeerrordiag: 
[2025-12-09 16:07:11] 2025-12-09 21:06:23,194 | INFO     | exitcode: 0
[2025-12-09 16:07:11] 2025-12-09 21:06:23,194 | INFO     | exitmsg: OK
[2025-12-09 16:07:11] 2025-12-09 21:06:23,195 | INFO     | cpuconsumptiontime: 91061 s
[2025-12-09 16:07:11] 2025-12-09 21:06:23,195 | INFO     | nevents: 400
[2025-12-09 16:07:11] 2025-12-09 21:06:23,195 | INFO     | neventsw: 0
[2025-12-09 16:07:11] 2025-12-09 21:06:23,195 | INFO     | pid: 31564
[2025-12-09 16:07:11] 2025-12-09 21:06:23,195 | INFO     | pgrp: 31564
[2025-12-09 16:07:11] 2025-12-09 21:06:23,196 | INFO     | corecount: 8
[2025-12-09 16:07:11] 2025-12-09 21:06:23,196 | INFO     | event service: False
[2025-12-09 16:07:11] 2025-12-09 21:06:23,196 | INFO     | sizes: {0: 2283987, 6: 2284249, 11: 2284277, 12013: 2313781, 12015: 2322835, 12021: 2322973}
[2025-12-09 16:07:11] 2025-12-09 21:06:23,196 | INFO     | --------------------------------------------------
[2025-12-09 16:07:11] 2025-12-09 21:06:23,196 | INFO     | 
[2025-12-09 16:07:11] 2025-12-09 21:06:23,197 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-09 16:07:11] 2025-12-09 21:06:23,222 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,223 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,223 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,223 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,223 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,224 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,224 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,224 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,224 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,226 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,226 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,227 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 16:07:11] 2025-12-09 21:06:23,227 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,227 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 16:07:11] 2025-12-09 21:06:23,228 | INFO     | job 6924498315 has completed (purged errors)
[2025-12-09 16:07:11] 2025-12-09 21:06:23,228 | INFO     | overall cleanup function is called
[2025-12-09 16:07:11] 2025-12-09 21:06:24,237 | INFO     | --- collectZombieJob: --- 10, [31564]
[2025-12-09 16:07:11] 2025-12-09 21:06:24,237 | INFO     | zombie collector waiting for pid 31564
[2025-12-09 16:07:11] 2025-12-09 21:06:24,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 16:07:11] 2025-12-09 21:06:24,237 | INFO     | collected zombie processes
[2025-12-09 16:07:11] 2025-12-09 21:06:24,238 | INFO     | will attempt to kill all subprocesses of pid=31564
[2025-12-09 16:07:11] 2025-12-09 21:06:24,331 | INFO     | process IDs to be killed: [31564] (in reverse order)
[2025-12-09 16:07:11] 2025-12-09 21:06:24,383 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 16:07:11] 2025-12-09 21:06:24,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 16:07:11] 2025-12-09 21:06:24,390 | INFO     | did not find any defunct processes belonging to 31564
[2025-12-09 16:07:11] 2025-12-09 21:06:24,393 | INFO     | did not find any defunct processes belonging to 31564
[2025-12-09 16:07:11] 2025-12-09 21:06:24,394 | INFO     | ready for new job
[2025-12-09 16:07:11] 2025-12-09 21:06:24,394 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 16:07:11] 2025-12-09 21:06:24,396 | INFO     | ***************************************
[2025-12-09 16:07:11] 2025-12-09 21:06:24,397 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-09 16:07:11] 2025-12-09 21:06:24,397 | INFO     | ***************************************
[2025-12-09 16:07:11] 2025-12-09 21:06:24,397 | INFO     | 
[2025-12-09 16:07:11] 2025-12-09 21:06:24,397 | INFO     | architecture information:
[2025-12-09 16:07:11] 2025-12-09 21:06:24,398 | INFO     | executing command: cat /etc/os-release
[2025-12-09 16:07:11] 2025-12-09 21:06:24,414 | INFO     | cat /etc/os-release:
[2025-12-09 16:07:11] NAME="CentOS Linux"
[2025-12-09 16:07:11] VERSION="7 (Core)"
[2025-12-09 16:07:11] ID="centos"
[2025-12-09 16:07:11] ID_LIKE="rhel fedora"
[2025-12-09 16:07:11] VERSION_ID="7"
[2025-12-09 16:07:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 16:07:11] ANSI_COLOR="0;31"
[2025-12-09 16:07:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 16:07:11] HOME_URL="https://www.centos.org/"
[2025-12-09 16:07:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 16:07:11] 
[2025-12-09 16:07:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 16:07:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 16:07:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 16:07:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 16:07:11] 
[2025-12-09 16:07:11] 2025-12-09 21:06:24,414 | INFO     | ***************************************
[2025-12-09 16:07:11] 2025-12-09 21:06:24,918 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-09 16:07:11] 2025-12-09 21:06:25,003 | INFO     | sufficient remaining disk space (18365808640 B)
[2025-12-09 16:07:11] 2025-12-09 21:06:25,004 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 16:07:11] 2025-12-09 21:06:25,004 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 16:07:11] 2025-12-09 21:06:25,005 | INFO     | update_server=False
[2025-12-09 16:07:11] 2025-12-09 21:06:25,005 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 16:07:11] 2025-12-09 21:06:25,310 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 16:07:11] 2025-12-09 21:06:25,461 | INFO     | all payload control threads have been joined
[2025-12-09 16:07:11] 2025-12-09 21:06:25,481 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 16:07:11] 2025-12-09 21:06:25,481 | INFO     | aborting loop
[2025-12-09 16:07:11] 2025-12-09 21:06:25,939 | INFO     | all job control threads have been joined
[2025-12-09 16:07:11] 2025-12-09 21:06:25,975 | INFO     | all data control threads have been joined
[2025-12-09 16:07:11] 2025-12-09 21:06:26,010 | INFO     | [job] retrieve thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,189 | INFO     | [data] copytool_in thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,291 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,466 | INFO     | [payload] control thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,485 | INFO     | [job] job monitor thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,527 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,711 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,945 | INFO     | [job] control thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,981 | INFO     | [data] control thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:26,984 | INFO     | [job] validate thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:27,073 | INFO     | [payload] validate_post thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:27,278 | INFO     | [payload] failed_post thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:27,316 | INFO     | [data] copytool_out thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:27,900 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 16:07:11] 2025-12-09 21:06:27,991 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 16:07:11] 2025-12-09 21:06:28,997 | INFO     | [job] queue monitor thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:31,907 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:35,068 | INFO     | job.realtimelogging is not enabled
[2025-12-09 16:07:11] 2025-12-09 21:06:36,074 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 16:07:11] 2025-12-09 21:06:55,354 | INFO     | PID=25134 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-09 16:07:11] 2025-12-09 21:06:55,355 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 16:07:11] 2025-12-09 21:06:55,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 16:07:11] 2025-12-09 21:06:55,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 16:07:11] 2025-12-09 21:07:03,722 | INFO     | [monitor] cgroup control has ended
[2025-12-09 16:07:11] 2025-12-09 21:07:05,789 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140001786906432)>', '<ExcThread(monitor, started 140000884676352)>']
[2025-12-09 16:07:11] 2025-12-09 21:07:06,401 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 16:07:11] 2025-12-09 21:07:06,401 | INFO     | [monitor] control thread has ended
[2025-12-09 16:07:11] 2025-12-09 21:07:10,814 | INFO     | all workflow threads have been joined
[2025-12-09 16:07:11] 2025-12-09 21:07:10,815 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 16:07:11] 2025-12-09 21:07:10,815 | INFO     | traces error code: 0
[2025-12-09 16:07:11] 2025-12-09 21:07:10,816 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 16:07:11] 2025-12-09 21:07:10,933 [wrapper] ==== pilot stdout END ====
[2025-12-09 16:07:11] 2025-12-09 21:07:10,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 16:07:11] 2025-12-09 21:07:10,941 [wrapper] pilotpid: 25134
[2025-12-09 16:07:11] 2025-12-09 21:07:10,945 [wrapper] Pilot exit status: 0
[2025-12-09 16:07:11] 2025-12-09 21:07:10,962 [wrapper] pandaids: 6924498315
[2025-12-09 16:07:11] 2025-12-09 21:07:11,014 [wrapper] cleanup supervisor_pilot 19967 25135
[2025-12-09 16:07:11] 2025-12-09 21:07:11,018 [wrapper] Test setup, not cleaning
[2025-12-09 16:07:11] 2025-12-09 21:07:11,022 [wrapper] apfmon messages muted
[2025-12-09 16:07:11] 2025-12-09 21:07:11,027 [wrapper] ==== wrapper stdout END ====
[2025-12-09 16:07:11] 2025-12-09 21:07:11,031 [wrapper] ==== wrapper stderr END ====
[2025-12-09 16:07:11]  *** Error codes and diagnostics ***
[2025-12-09 16:07:11]     "exeErrorCode": 0,
[2025-12-09 16:07:11]     "exeErrorDiag": "",
[2025-12-09 16:07:11]     "pilotErrorCode": 0,
[2025-12-09 16:07:11]     "pilotErrorDiag": "",
[2025-12-09 16:07:11]  *** Listing of results directory ***
[2025-12-09 16:07:11] total 543472
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas    579449 Dec  9 12:16 pilot3.tar.gz
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas      5112 Dec  9 12:44 queuedata.json
[2025-12-09 16:07:11] -rwx------ 1 boincer umatlas     36292 Dec  9 12:44 runpilot2-wrapper.sh
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas       100 Dec  9 12:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 16:07:11] -rwxr-xr-x 1 boincer umatlas      7986 Dec  9 12:45 run_atlas
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas       105 Dec  9 12:45 job.xml
[2025-12-09 16:07:11] -rw-r--r-- 2 boincer umatlas 295260453 Dec  9 12:45 EVNT.47838372._000012.pool.root.1
[2025-12-09 16:07:11] -rw-r--r-- 2 boincer umatlas     15847 Dec  9 12:45 start_atlas.sh
[2025-12-09 16:07:11] drwxrwx--x 2 boincer umatlas      4096 Dec  9 12:45 shared
[2025-12-09 16:07:11] -rw-r--r-- 2 boincer umatlas    592376 Dec  9 12:45 input.tar.gz
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas         0 Dec  9 12:45 boinc_lockfile
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas      2532 Dec  9 12:45 pandaJob.out
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas        57 Dec  9 12:45 setup.sh.local
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas    979025 Dec  9 12:45 agis_schedconf.cvmfs.json
[2025-12-09 16:07:11] drwx------ 5 boincer umatlas      4096 Dec  9 12:45 pilot3
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas      5911 Dec  9 16:01 init_data.xml
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas 253185623 Dec  9 16:05 HITS.47838378._000280.pool.root.1
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas       531 Dec  9 16:05 boinc_task_state.xml
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas      1050 Dec  9 16:06 memory_monitor_summary.json
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas   1516240 Dec  9 16:06 agis_ddmendpoints.agis.ALL.json
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas    421127 Dec  9 16:06 log.47838378._000280.job.log.tgz.1
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas      7841 Dec  9 16:06 heartbeat.json
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas        95 Dec  9 16:06 pilot_heartbeat.json
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas      8192 Dec  9 16:07 boinc_mmap_file
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas        28 Dec  9 16:07 wrapper_checkpoint.txt
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas      4818 Dec  9 16:07 pilotlog.txt
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas   1662654 Dec  9 16:07 log.47838378._000280.job.log.1
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas       357 Dec  9 16:07 output.list
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas       620 Dec  9 16:07 runtime_log
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas   2099200 Dec  9 16:07 result.tar.gz
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas       663 Dec  9 16:07 sUDLDmkwGn8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoWQKDm4GgWVo.diag
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas      9343 Dec  9 16:07 runtime_log.err
[2025-12-09 16:07:11] -rw-r--r-- 1 boincer umatlas     21453 Dec  9 16:07 stderr.txt
[2025-12-09 16:07:11] HITS file was successfully produced:
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas 253185623 Dec  9 16:05 shared/HITS.pool.root.1
[2025-12-09 16:07:11]  *** Contents of shared directory: ***
[2025-12-09 16:07:11] total 538248
[2025-12-09 16:07:11] -rw-r--r-- 2 boincer umatlas 295260453 Dec  9 12:45 ATLAS.root_0
[2025-12-09 16:07:11] -rw-r--r-- 2 boincer umatlas     15847 Dec  9 12:45 start_atlas.sh
[2025-12-09 16:07:11] -rw-r--r-- 2 boincer umatlas    592376 Dec  9 12:45 input.tar.gz
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas 253185623 Dec  9 16:05 HITS.pool.root.1
[2025-12-09 16:07:11] -rw------- 1 boincer umatlas   2099200 Dec  9 16:07 result.tar.gz
16:07:12 (21091): run_atlas exited; CPU time 90991.368793
16:07:12 (21091): called boinc_finish(0)

</stderr_txt>
]]>

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