Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:02:03 (26198): wrapper (7.7.26015): starting
07:02:03 (26198): wrapper: running run_atlas (--nthreads 8)
[2025-12-09 07:02:03] Arguments: --nthreads 8
[2025-12-09 07:02:03] Threads: 8
[2025-12-09 07:02:03] Checking for CVMFS
[2025-12-09 07:02:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 07:02:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 07:02:03] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 07:02:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 07:02:04] 2.11.2.0 31887 25081 86876 153804 3 1 18322840 20275201 1 130560 0 7008956 99.880 1542234 37314 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-09 07:02:04] CVMFS is ok
[2025-12-09 07:02:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 07:02:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-09 07:02:04] Further information can be found at the LHC@home message board.
[2025-12-09 07:02:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 07:02:04] Checking for apptainer binary...
[2025-12-09 07:02:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-09 07:02:04] Running /usr/bin/apptainer --version
[2025-12-09 07:02:04] apptainer version 1.3.2-1.el7
[2025-12-09 07:02:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 07:02:05] c-204-12.aglt2.org
[2025-12-09 07:02:05] apptainer works
[2025-12-09 07:02:05] Set ATHENA_PROC_NUMBER=8
[2025-12-09 07:02:05] Set ATHENA_CORE_NUMBER=8
[2025-12-09 07:02:06] Starting ATLAS job with PandaID=6924227961
[2025-12-09 07:02:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 09:46:47]  *** The last 200 lines of the pilot log: ***
[2025-12-09 09:46:47] 2025-12-09 14:46:11,777 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-09 09:46:47] 2025-12-09 14:46:11,777 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-09 09:46:47] 2025-12-09 14:46:11,781 | INFO     | fitting pss+swap vs Time
[2025-12-09 09:46:47] 2025-12-09 14:46:11,782 | INFO     | sum of square deviations: 1294014960.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,783 | INFO     | sum of deviations: -11484385026.999998
[2025-12-09 09:46:47] 2025-12-09 14:46:11,783 | INFO     | mean x: 1765286658.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,783 | INFO     | mean y: 2524864.3229813664
[2025-12-09 09:46:47] 2025-12-09 14:46:11,784 | INFO     | intersect: 15669447033.057467
[2025-12-09 09:46:47] 2025-12-09 14:46:11,784 | INFO     | chi2: 2.423344779033579
[2025-12-09 09:46:47] 2025-12-09 14:46:11,784 | INFO     | sum of square deviations: 1177156955.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,786 | INFO     | sum of deviations: -342724870.49999607
[2025-12-09 09:46:47] 2025-12-09 14:46:11,786 | INFO     | mean x: 1765286505.5
[2025-12-09 09:46:47] 2025-12-09 14:46:11,786 | INFO     | mean y: 2539051.5705128205
[2025-12-09 09:46:47] 2025-12-09 14:46:11,787 | INFO     | sufficient remaining disk space (18457034752 B)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,787 | INFO     | intersect: 516495653.89367384
[2025-12-09 09:46:47] 2025-12-09 14:46:11,787 | INFO     | work directory size check will use 2768240640 B as a max limit (20% grace limit added, divider=1)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,787 | INFO     | chi2: 1.6556985662012031
[2025-12-09 09:46:47] 2025-12-09 14:46:11,788 | INFO     | current chi2=1.6556985662012031 (change=31.677135646315683 %)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,788 | INFO     | sum of square deviations: 1067554900.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,789 | INFO     | sum of deviations: -147073073.99999157
[2025-12-09 09:46:47] 2025-12-09 14:46:11,789 | INFO     | mean x: 1765286353.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,789 | INFO     | mean y: 2539323.9006622517
[2025-12-09 09:46:47] 2025-12-09 14:46:11,789 | INFO     | intersect: 245736269.01884234
[2025-12-09 09:46:47] 2025-12-09 14:46:11,790 | INFO     | chi2: 1.6562242865847636
[2025-12-09 09:46:47] 2025-12-09 14:46:11,790 | INFO     | current chi2=1.6562242865847636 (change=-0.0317521796716095 %)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,790 | INFO     | right removable region: 150
[2025-12-09 09:46:47] 2025-12-09 14:46:11,790 | INFO     | sum of square deviations: 1177156955.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,791 | INFO     | sum of deviations: -35816774457.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,791 | INFO     | mean x: 1765286810.5
[2025-12-09 09:46:47] 2025-12-09 14:46:11,791 | INFO     | mean y: 2556158.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,792 | INFO     | intersect: 53714067843.028786
[2025-12-09 09:46:47] 2025-12-09 14:46:11,792 | INFO     | chi2: 0.9626400567460464
[2025-12-09 09:46:47] 2025-12-09 14:46:11,792 | INFO     | current chi2=0.9626400567460464 (change=60.27638885417106 %)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,792 | INFO     | sum of square deviations: 1067554900.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,793 | INFO     | sum of deviations: -34662395451.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,793 | INFO     | mean x: 1765286963.0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,794 | INFO     | mean y: 2554468.655629139
[2025-12-09 09:46:47] 2025-12-09 14:46:11,794 | INFO     | intersect: 57319583125.44959
[2025-12-09 09:46:47] 2025-12-09 14:46:11,794 | INFO     | chi2: 0.9437882962221419
[2025-12-09 09:46:47] 2025-12-09 14:46:11,794 | INFO     | current chi2=0.9437882962221419 (change=1.9583395051757904 %)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,794 | INFO     | left removable region: 20
[2025-12-09 09:46:47] 2025-12-09 14:46:11,795 | INFO     | sum of square deviations: 681212772.5
[2025-12-09 09:46:47] 2025-12-09 14:46:11,795 | INFO     | sum of deviations: -13540781189.500002
[2025-12-09 09:46:47] 2025-12-09 14:46:11,795 | INFO     | mean x: 1765286932.5
[2025-12-09 09:46:47] 2025-12-09 14:46:11,796 | INFO     | mean y: 2556267.3307692306
[2025-12-09 09:46:47] 2025-12-09 14:46:11,796 | INFO     | intersect: 35091980680.121216
[2025-12-09 09:46:47] 2025-12-09 14:46:11,796 | INFO     | chi2: 0.11835485142149105
[2025-12-09 09:46:47] 2025-12-09 14:46:11,796 | INFO     | current memory leak: -19.88 B/s (using 130 data points, chi2=0.12)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,797 | INFO     | could have reported an average CPU frequency of 2015 MHz (9 samples)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,797 | INFO     | ..............................
[2025-12-09 09:46:47] 2025-12-09 14:46:11,797 | INFO     | . Timing measurements:
[2025-12-09 09:46:47] 2025-12-09 14:46:11,797 | INFO     | . get job = 0 s
[2025-12-09 09:46:47] 2025-12-09 14:46:11,798 | INFO     | . initial setup = 2 s
[2025-12-09 09:46:47] 2025-12-09 14:46:11,798 | INFO     | . payload setup = 8 s
[2025-12-09 09:46:47] 2025-12-09 14:46:11,798 | INFO     | . stage-in = 0 s
[2025-12-09 09:46:47] 2025-12-09 14:46:11,798 | INFO     | . payload execution = 9786 s
[2025-12-09 09:46:47] 2025-12-09 14:46:11,798 | INFO     | . stage-out = 0 s
[2025-12-09 09:46:47] 2025-12-09 14:46:11,798 | INFO     | . log creation = 0 s
[2025-12-09 09:46:47] 2025-12-09 14:46:11,799 | INFO     | ..............................
[2025-12-09 09:46:47] 2025-12-09 14:46:11,862 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6924227961: 3238683 B (within 2768240640 B limit)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,884 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6924227961/HITS.47240594._001321.pool.root.1 does not exist (skip from workdir size calculation)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,891 | INFO     | total size of present files: 0 B (workdir size: 3238683 B)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,891 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6924227961/HITS.47240594._001321.pool.root.1 since it does not exist
[2025-12-09 09:46:47] 2025-12-09 14:46:11,926 | INFO     | 
[2025-12-09 09:46:47] 2025-12-09 14:46:11,927 | INFO     | job summary report
[2025-12-09 09:46:47] 2025-12-09 14:46:11,927 | INFO     | --------------------------------------------------
[2025-12-09 09:46:47] 2025-12-09 14:46:11,927 | INFO     | PanDA job id: 6924227961
[2025-12-09 09:46:47] 2025-12-09 14:46:11,927 | INFO     | task id: 47240594
[2025-12-09 09:46:47] 2025-12-09 14:46:11,927 | INFO     | errors: (none)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,927 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-09 09:46:47] 2025-12-09 14:46:11,928 | INFO     | pilot state: finished 
[2025-12-09 09:46:47] 2025-12-09 14:46:11,928 | INFO     | transexitcode: 0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,928 | INFO     | exeerrorcode: 0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,928 | INFO     | exeerrordiag: 
[2025-12-09 09:46:47] 2025-12-09 14:46:11,929 | INFO     | exitcode: 0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,929 | INFO     | exitmsg: OK
[2025-12-09 09:46:47] 2025-12-09 14:46:11,929 | INFO     | cpuconsumptiontime: 73177 s
[2025-12-09 09:46:47] 2025-12-09 14:46:11,929 | INFO     | nevents: 400
[2025-12-09 09:46:47] 2025-12-09 14:46:11,930 | INFO     | neventsw: 0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,930 | INFO     | pid: 4403
[2025-12-09 09:46:47] 2025-12-09 14:46:11,930 | INFO     | pgrp: 4403
[2025-12-09 09:46:47] 2025-12-09 14:46:11,930 | INFO     | corecount: 8
[2025-12-09 09:46:47] 2025-12-09 14:46:11,931 | INFO     | event service: False
[2025-12-09 09:46:47] 2025-12-09 14:46:11,931 | INFO     | sizes: {0: 2283921, 1: 2284120, 7: 2284382, 12: 2284410, 9799: 2312899, 9801: 2322081, 9809: 2322283}
[2025-12-09 09:46:47] 2025-12-09 14:46:11,931 | INFO     | --------------------------------------------------
[2025-12-09 09:46:47] 2025-12-09 14:46:11,931 | INFO     | 
[2025-12-09 09:46:47] 2025-12-09 14:46:11,932 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-09 09:46:47] 2025-12-09 14:46:11,958 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,958 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,959 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,959 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,959 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,959 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,959 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,960 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,960 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,960 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,960 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,960 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,961 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,961 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,961 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,961 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,961 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,962 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,962 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,962 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-09 09:46:47] 2025-12-09 14:46:11,962 | INFO     | job 6924227961 has completed (purged errors)
[2025-12-09 09:46:47] 2025-12-09 14:46:11,963 | INFO     | overall cleanup function is called
[2025-12-09 09:46:47] 2025-12-09 14:46:12,000 | INFO     | number of running child processes to parent process 4403: 1
[2025-12-09 09:46:47] 2025-12-09 14:46:12,001 | INFO     | maximum number of monitored processes: 6
[2025-12-09 09:46:47] 2025-12-09 14:46:12,001 | INFO     | aborting job monitoring since job object (job id=6924227961) has expired
[2025-12-09 09:46:47] 2025-12-09 14:46:12,971 | INFO     | --- collectZombieJob: --- 10, [4403]
[2025-12-09 09:46:47] 2025-12-09 14:46:12,971 | INFO     | zombie collector waiting for pid 4403
[2025-12-09 09:46:47] 2025-12-09 14:46:12,988 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-09 09:46:47] 2025-12-09 14:46:12,988 | INFO     | collected zombie processes
[2025-12-09 09:46:47] 2025-12-09 14:46:12,988 | INFO     | will attempt to kill all subprocesses of pid=4403
[2025-12-09 09:46:47] 2025-12-09 14:46:13,081 | INFO     | process IDs to be killed: [4403] (in reverse order)
[2025-12-09 09:46:47] 2025-12-09 14:46:13,140 | WARNING  | found no corresponding commands to process id(s)
[2025-12-09 09:46:47] 2025-12-09 14:46:13,140 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-09 09:46:47] 2025-12-09 14:46:13,144 | INFO     | did not find any defunct processes belonging to 4403
[2025-12-09 09:46:47] 2025-12-09 14:46:13,147 | INFO     | did not find any defunct processes belonging to 4403
[2025-12-09 09:46:47] 2025-12-09 14:46:13,147 | INFO     | ready for new job
[2025-12-09 09:46:47] 2025-12-09 14:46:13,148 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-09 09:46:47] 2025-12-09 14:46:13,150 | INFO     | ***************************************
[2025-12-09 09:46:47] 2025-12-09 14:46:13,150 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-09 09:46:47] 2025-12-09 14:46:13,151 | INFO     | ***************************************
[2025-12-09 09:46:47] 2025-12-09 14:46:13,151 | INFO     | 
[2025-12-09 09:46:47] 2025-12-09 14:46:13,151 | INFO     | architecture information:
[2025-12-09 09:46:47] 2025-12-09 14:46:13,152 | INFO     | executing command: cat /etc/os-release
[2025-12-09 09:46:47] 2025-12-09 14:46:13,171 | INFO     | cat /etc/os-release:
[2025-12-09 09:46:47] NAME="CentOS Linux"
[2025-12-09 09:46:47] VERSION="7 (Core)"
[2025-12-09 09:46:47] ID="centos"
[2025-12-09 09:46:47] ID_LIKE="rhel fedora"
[2025-12-09 09:46:47] VERSION_ID="7"
[2025-12-09 09:46:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-09 09:46:47] ANSI_COLOR="0;31"
[2025-12-09 09:46:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-09 09:46:47] HOME_URL="https://www.centos.org/"
[2025-12-09 09:46:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-09 09:46:47] 
[2025-12-09 09:46:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-09 09:46:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-09 09:46:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-09 09:46:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-09 09:46:47] 
[2025-12-09 09:46:47] 2025-12-09 14:46:13,172 | INFO     | ***************************************
[2025-12-09 09:46:47] 2025-12-09 14:46:13,675 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-09 09:46:47] 2025-12-09 14:46:13,694 | INFO     | sufficient remaining disk space (18461229056 B)
[2025-12-09 09:46:47] 2025-12-09 14:46:13,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-09 09:46:47] 2025-12-09 14:46:13,695 | INFO     | current server update state: UPDATING_FINAL
[2025-12-09 09:46:47] 2025-12-09 14:46:13,695 | INFO     | update_server=False
[2025-12-09 09:46:47] 2025-12-09 14:46:13,695 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-09 09:46:47] 2025-12-09 14:46:13,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-09 09:46:47] 2025-12-09 14:46:13,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-09 09:46:47] 2025-12-09 14:46:13,696 | INFO     | aborting loop
[2025-12-09 09:46:47] 2025-12-09 14:46:13,778 | INFO     | all job control threads have been joined
[2025-12-09 09:46:47] 2025-12-09 14:46:14,287 | INFO     | all data control threads have been joined
[2025-12-09 09:46:47] 2025-12-09 14:46:14,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 09:46:47] 2025-12-09 14:46:14,633 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 09:46:47] 2025-12-09 14:46:14,697 | INFO     | [job] queue monitor thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:14,701 | INFO     | [job] retrieve thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:14,702 | INFO     | [job] job monitor thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:14,772 | INFO     | all payload control threads have been joined
[2025-12-09 09:46:47] 2025-12-09 14:46:14,784 | INFO     | [job] control thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:14,884 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:14,884 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:15,291 | INFO     | [data] control thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:15,454 | INFO     | [data] copytool_in thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:15,761 | INFO     | [payload] validate_post thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:15,777 | INFO     | [payload] control thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:15,931 | INFO     | [job] validate thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:15,937 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:16,033 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:16,266 | INFO     | [payload] failed_post thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:16,559 | INFO     | [data] copytool_out thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:18,639 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 09:46:47] 2025-12-09 14:46:41,643 | INFO     | [monitor] cgroup control has ended
[2025-12-09 09:46:47] 2025-12-09 14:46:42,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643931592512)>', '<ExcThread(monitor, started 139643244754688)>']
[2025-12-09 09:46:47] 2025-12-09 14:46:43,200 | INFO     | PID=30243 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-09 09:46:47] 2025-12-09 14:46:43,201 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 09:46:47] 2025-12-09 14:46:43,201 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 09:46:47] 2025-12-09 14:46:43,201 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 09:46:47] 2025-12-09 14:46:43,201 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 09:46:47] 2025-12-09 14:46:43,201 | INFO     | [monitor] control thread has ended
[2025-12-09 09:46:47] 2025-12-09 14:46:47,282 | INFO     | all workflow threads have been joined
[2025-12-09 09:46:47] 2025-12-09 14:46:47,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 09:46:47] 2025-12-09 14:46:47,290 | INFO     | traces error code: 0
[2025-12-09 09:46:47] 2025-12-09 14:46:47,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 09:46:47] 2025-12-09 14:46:47,413 [wrapper] ==== pilot stdout END ====
[2025-12-09 09:46:47] 2025-12-09 14:46:47,418 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 09:46:47] 2025-12-09 14:46:47,422 [wrapper] pilotpid: 30243
[2025-12-09 09:46:47] 2025-12-09 14:46:47,427 [wrapper] Pilot exit status: 0
[2025-12-09 09:46:47] 2025-12-09 14:46:47,444 [wrapper] pandaids: 6924227961
[2025-12-09 09:46:47] 2025-12-09 14:46:47,487 [wrapper] cleanup supervisor_pilot  6527 30244
[2025-12-09 09:46:47] 2025-12-09 14:46:47,493 [wrapper] Test setup, not cleaning
[2025-12-09 09:46:47] 2025-12-09 14:46:47,498 [wrapper] apfmon messages muted
[2025-12-09 09:46:47] 2025-12-09 14:46:47,503 [wrapper] ==== wrapper stdout END ====
[2025-12-09 09:46:47] 2025-12-09 14:46:47,508 [wrapper] ==== wrapper stderr END ====
[2025-12-09 09:46:47]  *** Error codes and diagnostics ***
[2025-12-09 09:46:47]     "exeErrorCode": 0,
[2025-12-09 09:46:47]     "exeErrorDiag": "",
[2025-12-09 09:46:47]     "pilotErrorCode": 0,
[2025-12-09 09:46:47]     "pilotErrorDiag": "",
[2025-12-09 09:46:47]  *** Listing of results directory ***
[2025-12-09 09:46:47] total 467900
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas    579449 Dec  9 06:59 pilot3.tar.gz
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas      5112 Dec  9 07:00 queuedata.json
[2025-12-09 09:46:47] -rwx------ 1 boincer umatlas     36292 Dec  9 07:01 runpilot2-wrapper.sh
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas       100 Dec  9 07:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 09:46:47] -rwxr-xr-x 1 boincer umatlas      7986 Dec  9 07:02 run_atlas
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas       105 Dec  9 07:02 job.xml
[2025-12-09 09:46:47] -rw-r--r-- 2 boincer umatlas 277346985 Dec  9 07:02 EVNT.47240566._000055.pool.root.1
[2025-12-09 09:46:47] -rw-r--r-- 2 boincer umatlas     15847 Dec  9 07:02 start_atlas.sh
[2025-12-09 09:46:47] drwxrwx--x 2 boincer umatlas      4096 Dec  9 07:02 shared
[2025-12-09 09:46:47] -rw-r--r-- 2 boincer umatlas    592405 Dec  9 07:02 input.tar.gz
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas         0 Dec  9 07:02 boinc_lockfile
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas      2610 Dec  9 07:02 pandaJob.out
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas        57 Dec  9 07:02 setup.sh.local
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas    975670 Dec  9 07:02 agis_schedconf.cvmfs.json
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas   1516240 Dec  9 07:02 agis_ddmendpoints.agis.ALL.json
[2025-12-09 09:46:47] drwx------ 5 boincer umatlas      4096 Dec  9 07:02 pilot3
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas 194369544 Dec  9 09:45 HITS.47240594._001321.pool.root.1
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas        95 Dec  9 09:45 pilot_heartbeat.json
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas       529 Dec  9 09:45 boinc_task_state.xml
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas      5910 Dec  9 09:45 init_data.xml
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas      1049 Dec  9 09:45 memory_monitor_summary.json
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas    386495 Dec  9 09:46 log.47240594._001321.job.log.tgz.1
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas      7838 Dec  9 09:46 heartbeat.json
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas      8192 Dec  9 09:46 boinc_mmap_file
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas        27 Dec  9 09:46 wrapper_checkpoint.txt
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas      4746 Dec  9 09:46 pilotlog.txt
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas   1364028 Dec  9 09:46 log.47240594._001321.job.log.1
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas       357 Dec  9 09:46 output.list
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas       620 Dec  9 09:46 runtime_log
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas   1771520 Dec  9 09:46 result.tar.gz
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas       661 Dec  9 09:46 tmSMDmDaBn8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5wMKDmp2KMTm.diag
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas      9342 Dec  9 09:46 runtime_log.err
[2025-12-09 09:46:47] -rw-r--r-- 1 boincer umatlas     21311 Dec  9 09:46 stderr.txt
[2025-12-09 09:46:47] HITS file was successfully produced:
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas 194369544 Dec  9 09:45 shared/HITS.pool.root.1
[2025-12-09 09:46:47]  *** Contents of shared directory: ***
[2025-12-09 09:46:47] total 463000
[2025-12-09 09:46:47] -rw-r--r-- 2 boincer umatlas 277346985 Dec  9 07:02 ATLAS.root_0
[2025-12-09 09:46:47] -rw-r--r-- 2 boincer umatlas     15847 Dec  9 07:02 start_atlas.sh
[2025-12-09 09:46:47] -rw-r--r-- 2 boincer umatlas    592405 Dec  9 07:02 input.tar.gz
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas 194369544 Dec  9 09:45 HITS.pool.root.1
[2025-12-09 09:46:47] -rw------- 1 boincer umatlas   1771520 Dec  9 09:46 result.tar.gz
09:46:49 (26198): run_atlas exited; CPU time 73115.623047
09:46:49 (26198): called boinc_finish(0)

</stderr_txt>
]]>

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