Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:53:22 (3228930): wrapper (7.7.26015): starting
03:53:22 (3228930): wrapper: running run_atlas (--nthreads 11)
[2025-12-09 03:53:22] Arguments: --nthreads 11
[2025-12-09 03:53:22] Threads: 11
[2025-12-09 03:53:22] Checking for CVMFS
[2025-12-09 03:53:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-09 03:53:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-09 03:53:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-09 03:53:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-09 03:53:24] 2.13.2.0 9432 52346 244716 153799 1 13 33867349 39288832 7869 16776704 0 40277820 99.684 35328840 39144 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-09 03:53:24] CVMFS is ok
[2025-12-09 03:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-09 03:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-09 03:53:24] Further information can be found at the LHC@home message board.
[2025-12-09 03:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-09 03:53:24] Checking for apptainer binary...
[2025-12-09 03:53:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-09 03:53:24] Running /usr/bin/apptainer --version
[2025-12-09 03:53:24] apptainer version 1.4.4-1.el9
[2025-12-09 03:53:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-09 03:53:24] c-211-5.aglt2.org
[2025-12-09 03:53:24] apptainer works
[2025-12-09 03:53:24] Set ATHENA_PROC_NUMBER=11
[2025-12-09 03:53:24] Set ATHENA_CORE_NUMBER=11
[2025-12-09 03:53:25] Starting ATLAS job with PandaID=6897881042
[2025-12-09 03:53:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-10 06:36:00]  *** The last 200 lines of the pilot log: ***
[2025-12-10 06:36:00] 2025-12-10 11:35:12,725 | INFO     | monitor loop #5811: job 0:6897881042 is in state 'finished'
[2025-12-10 06:36:00] 2025-12-10 11:35:12,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,023 | INFO     | time since job start (96071s) is within the limit (172800.0s)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,540 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-10 06:36:00] 2025-12-10 11:35:13,548 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1205749999995
[2025-12-10 06:36:00] 2025-12-10 11:35:13,555 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897881042/memory_monitor_summary.json (trf name=prmon)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,556 | INFO     | extracted standard info from prmon json
[2025-12-10 06:36:00] 2025-12-10 11:35:13,556 | INFO     | extracted standard memory fields from prmon json
[2025-12-10 06:36:00] 2025-12-10 11:35:13,556 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-10 06:36:00] 2025-12-10 11:35:13,588 | INFO     | fitting pss+swap vs Time
[2025-12-10 06:36:00] 2025-12-10 11:35:13,591 | INFO     | sum of square deviations: 1209250403319.082
[2025-12-10 06:36:00] 2025-12-10 11:35:13,640 | INFO     | sum of deviations: 8137306938955.552
[2025-12-10 06:36:00] 2025-12-10 11:35:13,640 | INFO     | mean x: 1765318497.8621347
[2025-12-10 06:36:00] 2025-12-10 11:35:13,640 | INFO     | mean y: 3457169.127064803
[2025-12-10 06:36:00] 2025-12-10 11:35:13,640 | INFO     | intersect: -11875751986.141413
[2025-12-10 06:36:00] 2025-12-10 11:35:13,641 | INFO     | chi2: 8.147479705030337
[2025-12-10 06:36:00] 2025-12-10 11:35:13,643 | INFO     | sum of square deviations: 1197765705236.1357
[2025-12-10 06:36:00] 2025-12-10 11:35:13,681 | INFO     | sum of deviations: 8805173014512.086
[2025-12-10 06:36:00] 2025-12-10 11:35:13,681 | INFO     | mean x: 1765318345.3760357
[2025-12-10 06:36:00] 2025-12-10 11:35:13,682 | INFO     | mean y: 3466036.1829190566
[2025-12-10 06:36:00] 2025-12-10 11:35:13,682 | INFO     | intersect: -12973974700.996777
[2025-12-10 06:36:00] 2025-12-10 11:35:13,683 | INFO     | chi2: 4.689410237881539
[2025-12-10 06:36:00] 2025-12-10 11:35:13,683 | INFO     | current chi2=4.689410237881539 (change=42.443425357828765 %)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,684 | INFO     | sum of square deviations: 1186353889807.8623
[2025-12-10 06:36:00] 2025-12-10 11:35:13,722 | INFO     | sum of deviations: 9005147328471.691
[2025-12-10 06:36:00] 2025-12-10 11:35:13,722 | INFO     | mean x: 1765318192.8893862
[2025-12-10 06:36:00] 2025-12-10 11:35:13,722 | INFO     | mean y: 3468705.1310741687
[2025-12-10 06:36:00] 2025-12-10 11:35:13,722 | INFO     | intersect: -13396369694.838215
[2025-12-10 06:36:00] 2025-12-10 11:35:13,724 | INFO     | chi2: 4.092030090109097
[2025-12-10 06:36:00] 2025-12-10 11:35:13,724 | INFO     | current chi2=4.092030090109097 (change=12.73891848801675 %)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,725 | INFO     | right removable region: 1563
[2025-12-10 06:36:00] 2025-12-10 11:35:13,726 | INFO     | sum of square deviations: 1197761516976.137
[2025-12-10 06:36:00] 2025-12-10 11:35:13,764 | INFO     | sum of deviations: 7481439025119.92
[2025-12-10 06:36:00] 2025-12-10 11:35:13,764 | INFO     | mean x: 1765318650.3760357
[2025-12-10 06:36:00] 2025-12-10 11:35:13,764 | INFO     | mean y: 3465872.7476099427
[2025-12-10 06:36:00] 2025-12-10 11:35:13,764 | INFO     | intersect: -11023039533.802721
[2025-12-10 06:36:00] 2025-12-10 11:35:13,765 | INFO     | chi2: 5.066662112234109
[2025-12-10 06:36:00] 2025-12-10 11:35:13,766 | INFO     | current chi2=5.066662112234109 (change=37.813136139438306 %)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,767 | INFO     | sum of square deviations: 1186346947255.8818
[2025-12-10 06:36:00] 2025-12-10 11:35:13,829 | INFO     | sum of deviations: 7295862922884.0205
[2025-12-10 06:36:00] 2025-12-10 11:35:13,829 | INFO     | mean x: 1765318802.8810742
[2025-12-10 06:36:00] 2025-12-10 11:35:13,829 | INFO     | mean y: 3468351.881713555
[2025-12-10 06:36:00] 2025-12-10 11:35:13,830 | INFO     | intersect: -10852988126.386665
[2025-12-10 06:36:00] 2025-12-10 11:35:13,832 | INFO     | chi2: 4.960930670641345
[2025-12-10 06:36:00] 2025-12-10 11:35:13,832 | INFO     | current chi2=4.960930670641345 (change=2.08680664411115 %)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,832 | INFO     | left removable region: 20
[2025-12-10 06:36:00] 2025-12-10 11:35:13,834 | INFO     | sum of square deviations: 1139203393984.3406
[2025-12-10 06:36:00] 2025-12-10 11:35:13,893 | INFO     | sum of deviations: 7851734809743.017
[2025-12-10 06:36:00] 2025-12-10 11:35:13,893 | INFO     | mean x: 1765318772.4219053
[2025-12-10 06:36:00] 2025-12-10 11:35:13,893 | INFO     | mean y: 3484247.514581983
[2025-12-10 06:36:00] 2025-12-10 11:35:13,893 | INFO     | intersect: -12163627375.318604
[2025-12-10 06:36:00] 2025-12-10 11:35:13,895 | INFO     | chi2: 0.7730698632363372
[2025-12-10 06:36:00] 2025-12-10 11:35:13,896 | INFO     | current memory leak: 6.89 B/s (using 1543 data points, chi2=0.77)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,897 | INFO     | could have reported an average CPU frequency of 2600 MHz (55 samples)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,898 | INFO     | ..............................
[2025-12-10 06:36:00] 2025-12-10 11:35:13,898 | INFO     | . Timing measurements:
[2025-12-10 06:36:00] 2025-12-10 11:35:13,898 | INFO     | . get job = 0 s
[2025-12-10 06:36:00] 2025-12-10 11:35:13,898 | INFO     | . initial setup = 3 s
[2025-12-10 06:36:00] 2025-12-10 11:35:13,898 | INFO     | . payload setup = 18 s
[2025-12-10 06:36:00] 2025-12-10 11:35:13,898 | INFO     | . stage-in = 0 s
[2025-12-10 06:36:00] 2025-12-10 11:35:13,899 | INFO     | . payload execution = 95996 s
[2025-12-10 06:36:00] 2025-12-10 11:35:13,899 | INFO     | . stage-out = 3 s
[2025-12-10 06:36:00] 2025-12-10 11:35:13,899 | INFO     | . log creation = 1 s
[2025-12-10 06:36:00] 2025-12-10 11:35:13,899 | INFO     | ..............................
[2025-12-10 06:36:00] 2025-12-10 11:35:13,980 | INFO     | 
[2025-12-10 06:36:00] 2025-12-10 11:35:13,980 | INFO     | job summary report
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | --------------------------------------------------
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | PanDA job id: 6897881042
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | task id: 47556161
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | errors: (none)
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | pilot state: finished 
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | transexitcode: 0
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | exeerrorcode: 0
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | exeerrordiag: 
[2025-12-10 06:36:00] 2025-12-10 11:35:13,981 | INFO     | exitcode: 0
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | exitmsg: OK
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | cpuconsumptiontime: 306206 s
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | nevents: 1000
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | neventsw: 0
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | pid: 3239206
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | pgrp: 3239206
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | corecount: 11
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | event service: False
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | sizes: {0: 2284037, 1: 2284292, 2: 2284292, 12: 2284522, 13: 2284610, 23: 2284666, 96019: 2354165, 96023: 2363159, 96026: 2363215, 96034: 2363461}
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | --------------------------------------------------
[2025-12-10 06:36:00] 2025-12-10 11:35:13,982 | INFO     | 
[2025-12-10 06:36:00] 2025-12-10 11:35:13,983 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-10 06:36:00] 2025-12-10 11:35:14,003 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,003 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,003 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,003 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,003 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,004 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,005 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,005 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-10 06:36:00] 2025-12-10 11:35:14,005 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,005 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-10 06:36:00] 2025-12-10 11:35:14,005 | INFO     | job 6897881042 has completed (purged errors)
[2025-12-10 06:36:00] 2025-12-10 11:35:14,005 | INFO     | overall cleanup function is called
[2025-12-10 06:36:00] 2025-12-10 11:35:15,022 | INFO     | --- collectZombieJob: --- 10, [3239206]
[2025-12-10 06:36:00] 2025-12-10 11:35:15,023 | INFO     | zombie collector waiting for pid 3239206
[2025-12-10 06:36:00] 2025-12-10 11:35:15,023 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-10 06:36:00] 2025-12-10 11:35:15,023 | INFO     | collected zombie processes
[2025-12-10 06:36:00] 2025-12-10 11:35:15,023 | INFO     | will attempt to kill all subprocesses of pid=3239206
[2025-12-10 06:36:00] 2025-12-10 11:35:15,235 | INFO     | process IDs to be killed: [3239206] (in reverse order)
[2025-12-10 06:36:00] 2025-12-10 11:35:15,311 | WARNING  | found no corresponding commands to process id(s)
[2025-12-10 06:36:00] 2025-12-10 11:35:15,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-10 06:36:00] 2025-12-10 11:35:15,321 | INFO     | did not find any defunct processes belonging to 3239206
[2025-12-10 06:36:00] 2025-12-10 11:35:15,330 | INFO     | did not find any defunct processes belonging to 3239206
[2025-12-10 06:36:00] 2025-12-10 11:35:15,332 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-10 06:36:00] 2025-12-10 11:35:15,332 | INFO     | ready for new job
[2025-12-10 06:36:00] 2025-12-10 11:35:15,332 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-10 06:36:00] 2025-12-10 11:35:15,340 | INFO     | ***************************************
[2025-12-10 06:36:00] 2025-12-10 11:35:15,341 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-10 06:36:00] 2025-12-10 11:35:15,341 | INFO     | ***************************************
[2025-12-10 06:36:00] 2025-12-10 11:35:15,341 | INFO     | 
[2025-12-10 06:36:00] 2025-12-10 11:35:15,343 | INFO     | architecture information:
[2025-12-10 06:36:00] 2025-12-10 11:35:15,345 | INFO     | executing command: cat /etc/os-release
[2025-12-10 06:36:00] 2025-12-10 11:35:15,362 | INFO     | cat /etc/os-release:
[2025-12-10 06:36:00] NAME="CentOS Linux"
[2025-12-10 06:36:00] VERSION="7 (Core)"
[2025-12-10 06:36:00] ID="centos"
[2025-12-10 06:36:00] ID_LIKE="rhel fedora"
[2025-12-10 06:36:00] VERSION_ID="7"
[2025-12-10 06:36:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-10 06:36:00] ANSI_COLOR="0;31"
[2025-12-10 06:36:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-10 06:36:00] HOME_URL="https://www.centos.org/"
[2025-12-10 06:36:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-10 06:36:00] 
[2025-12-10 06:36:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-10 06:36:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-10 06:36:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-10 06:36:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-10 06:36:00] 
[2025-12-10 06:36:00] 2025-12-10 11:35:15,362 | INFO     | ***************************************
[2025-12-10 06:36:00] 2025-12-10 11:35:15,865 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-10 06:36:00] 2025-12-10 11:35:15,883 | INFO     | sufficient remaining disk space (51527024640 B)
[2025-12-10 06:36:00] 2025-12-10 11:35:15,884 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-10 06:36:00] 2025-12-10 11:35:15,884 | INFO     | current server update state: UPDATING_FINAL
[2025-12-10 06:36:00] 2025-12-10 11:35:15,884 | INFO     | update_server=False
[2025-12-10 06:36:00] 2025-12-10 11:35:15,884 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-10 06:36:00] 2025-12-10 11:35:15,885 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-10 06:36:00] 2025-12-10 11:35:15,943 | INFO     | all payload control threads have been joined
[2025-12-10 06:36:00] 2025-12-10 11:35:16,040 | INFO     | all data control threads have been joined
[2025-12-10 06:36:00] 2025-12-10 11:35:16,239 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-10 06:36:00] 2025-12-10 11:35:16,239 | INFO     | aborting loop
[2025-12-10 06:36:00] 2025-12-10 11:35:16,773 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-10 06:36:00] 2025-12-10 11:35:16,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-10 06:36:00] 2025-12-10 11:35:16,890 | INFO     | [job] queue monitor thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:16,890 | INFO     | [job] retrieve thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:16,901 | INFO     | [payload] failed_post thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:16,902 | INFO     | [payload] validate_pre thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:16,917 | INFO     | [data] copytool_in thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:16,948 | INFO     | [payload] control thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:16,971 | INFO     | [payload] execute_payloads thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:17,045 | INFO     | [data] control thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:17,244 | INFO     | [job] job monitor thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:17,461 | INFO     | [job] create_data_payload thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:17,495 | INFO     | [job] validate thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:17,552 | INFO     | all job control threads have been joined
[2025-12-10 06:36:00] 2025-12-10 11:35:17,812 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:18,177 | INFO     | [payload] validate_post thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:18,557 | INFO     | [job] control thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:18,780 | INFO     | [data] copytool_out thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:20,791 | INFO     | [data] queue_monitor thread has finished
[2025-12-10 06:36:00] 2025-12-10 11:35:46,418 | INFO     | PID=3232610 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-10 06:36:00] 2025-12-10 11:35:46,418 | INFO     | .. there are 7 such processes running
[2025-12-10 06:36:00] 2025-12-10 11:35:46,418 | INFO     | found 0 job(s) in 20 queues
[2025-12-10 06:36:00] 2025-12-10 11:35:46,418 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-10 06:36:00] 2025-12-10 11:35:46,418 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-10 06:36:00] 2025-12-10 11:35:53,564 | INFO     | [monitor] cgroup control has ended
[2025-12-10 06:36:00] 2025-12-10 11:35:55,406 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139725916309312)>', '<ExcThread(monitor, started 139725285357312)>']
[2025-12-10 06:36:00] 2025-12-10 11:35:55,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-10 06:36:00] 2025-12-10 11:35:55,464 | INFO     | [monitor] control thread has ended
[2025-12-10 06:36:00] 2025-12-10 11:36:00,407 | INFO     | all workflow threads have been joined
[2025-12-10 06:36:00] 2025-12-10 11:36:00,408 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-10 06:36:00] 2025-12-10 11:36:00,408 | INFO     | traces error code: 0
[2025-12-10 06:36:00] 2025-12-10 11:36:00,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-10 06:36:00] 2025-12-10 11:36:00,555 [wrapper] ==== pilot stdout END ====
[2025-12-10 06:36:00] 2025-12-10 11:36:00,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-10 06:36:00] 2025-12-10 11:36:00,562 [wrapper] pilotpid: 3232610
[2025-12-10 06:36:00] 2025-12-10 11:36:00,565 [wrapper] Pilot exit status: 0
[2025-12-10 06:36:00] 2025-12-10 11:36:00,575 [wrapper] pandaids: 6897881042
[2025-12-10 06:36:00] 2025-12-10 11:36:00,627 [wrapper] cleanup supervisor_pilot  957644 3232611
[2025-12-10 06:36:00] 2025-12-10 11:36:00,632 [wrapper] Test setup, not cleaning
[2025-12-10 06:36:00] 2025-12-10 11:36:00,636 [wrapper] apfmon messages muted
[2025-12-10 06:36:00] 2025-12-10 11:36:00,639 [wrapper] ==== wrapper stdout END ====
[2025-12-10 06:36:00] 2025-12-10 11:36:00,642 [wrapper] ==== wrapper stderr END ====
[2025-12-10 06:36:00]  *** Error codes and diagnostics ***
[2025-12-10 06:36:00]     "exeErrorCode": 0,
[2025-12-10 06:36:00]     "exeErrorDiag": "",
[2025-12-10 06:36:00]     "pilotErrorCode": 0,
[2025-12-10 06:36:00]     "pilotErrorDiag": "",
[2025-12-10 06:36:00]  *** Listing of results directory ***
[2025-12-10 06:36:00] total 1333100
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 20:44 pilot3.tar.gz
[2025-12-10 06:36:00] -rwx------. 1 boincer umatlas     36292 Nov 25 20:52 runpilot2-wrapper.sh
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 20:52 queuedata.json
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas       100 Dec  9 03:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-10 06:36:00] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  9 03:53 run_atlas
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas       105 Dec  9 03:53 job.xml
[2025-12-10 06:36:00] -rw-r--r--. 2 boincer umatlas 410151050 Dec  9 03:53 EVNT.47483658._002358.pool.root.1
[2025-12-10 06:36:00] -rw-r--r--. 2 boincer umatlas     15847 Dec  9 03:53 start_atlas.sh
[2025-12-10 06:36:00] drwxrwx--x. 2 boincer umatlas      4096 Dec  9 03:53 shared
[2025-12-10 06:36:00] -rw-r--r--. 2 boincer umatlas    590099 Dec  9 03:53 input.tar.gz
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas         0 Dec  9 03:53 boinc_lockfile
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas      2785 Dec  9 03:53 pandaJob.out
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas        57 Dec  9 03:53 setup.sh.local
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas    975050 Dec  9 03:53 agis_schedconf.cvmfs.json
[2025-12-10 06:36:00] drwx------. 5 boincer umatlas      4096 Dec  9 03:54 pilot3
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas       533 Dec 10 06:24 boinc_task_state.xml
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas      6660 Dec 10 06:27 init_data.xml
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas 921036431 Dec 10 06:34 HITS.47556161._003410.pool.root.1
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas        95 Dec 10 06:34 pilot_heartbeat.json
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas      1066 Dec 10 06:34 memory_monitor_summary.json
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas   1516240 Dec 10 06:35 agis_ddmendpoints.agis.ALL.json
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas   2874965 Dec 10 06:35 log.47556161._003410.job.log.tgz.1
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas      8633 Dec 10 06:35 heartbeat.json
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas      8192 Dec 10 06:35 boinc_mmap_file
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas        29 Dec 10 06:35 wrapper_checkpoint.txt
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas      4823 Dec 10 06:36 pilotlog.txt
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas  12125511 Dec 10 06:36 log.47556161._003410.job.log.1
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas       353 Dec 10 06:36 output.list
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas       620 Dec 10 06:36 runtime_log
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas  15022080 Dec 10 06:36 result.tar.gz
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas      9340 Dec 10 06:36 runtime_log.err
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas       661 Dec 10 06:36 CLrNDmItJi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZgMKDm96CQSo.diag
[2025-12-10 06:36:00] -rw-r--r--. 1 boincer umatlas     21370 Dec 10 06:36 stderr.txt
[2025-12-10 06:36:00] HITS file was successfully produced:
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas 921036431 Dec 10 06:34 shared/HITS.pool.root.1
[2025-12-10 06:36:00]  *** Contents of shared directory: ***
[2025-12-10 06:36:00] total 1315264
[2025-12-10 06:36:00] -rw-r--r--. 2 boincer umatlas 410151050 Dec  9 03:53 ATLAS.root_0
[2025-12-10 06:36:00] -rw-r--r--. 2 boincer umatlas     15847 Dec  9 03:53 start_atlas.sh
[2025-12-10 06:36:00] -rw-r--r--. 2 boincer umatlas    590099 Dec  9 03:53 input.tar.gz
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas 921036431 Dec 10 06:34 HITS.pool.root.1
[2025-12-10 06:36:00] -rw-------. 1 boincer umatlas  15022080 Dec 10 06:36 result.tar.gz
06:36:02 (3228930): run_atlas exited; CPU time 306521.378285
06:36:02 (3228930): called boinc_finish(0)

</stderr_txt>
]]>

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