Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:27:09 (3079607): wrapper (7.7.26015): starting
23:27:09 (3079607): wrapper: running run_atlas (--nthreads 3)
[2025-12-08 23:27:09] Arguments: --nthreads 3
[2025-12-08 23:27:09] Threads: 3
[2025-12-08 23:27:09] Checking for CVMFS
[2025-12-08 23:27:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 23:27:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 23:27:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 23:27:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 23:27:11] 2.9.2.0 3079802 0 30004 153782 3 1 18954531 36864000 0 130560 0 0 0.000 1292 13050 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-08 23:27:11] CVMFS is ok
[2025-12-08 23:27:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 23:27:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-08 23:27:11] Further information can be found at the LHC@home message board.
[2025-12-08 23:27:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 23:27:11] Checking for apptainer binary...
[2025-12-08 23:27:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 23:27:11] Running /usr/bin/apptainer --version
[2025-12-08 23:27:11] apptainer version 1.4.1-1.1
[2025-12-08 23:27:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 23:27:11] thA333
[2025-12-08 23:27:11] apptainer works
[2025-12-08 23:27:11] Set ATHENA_PROC_NUMBER=3
[2025-12-08 23:27:11] Set ATHENA_CORE_NUMBER=3
[2025-12-08 23:27:11] Starting ATLAS job with PandaID=6900935592
[2025-12-08 23:27:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 08:18:33]  *** The last 200 lines of the pilot log: ***
[2025-12-09 08:18:33] 2025-12-09 07:18:03,517 | INFO     | [job] retrieve thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:03,518 | INFO     | [job] job monitor thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:03,518 | INFO     | [job] queue monitor thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:03,575 | INFO     | [payload] control thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:03,916 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:04,089 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 08:18:33] 2025-12-09 07:18:04,188 | INFO     | all job control threads have been joined
[2025-12-09 08:18:33] 2025-12-09 07:18:04,226 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:04,323 | INFO     | [data] copytool_in thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:04,428 | INFO     | [data] control thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:04,518 | INFO     | [data] copytool_out thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:04,648 | INFO     | [payload] validate_post thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:04,728 | INFO     | [job] validate thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:04,955 | INFO     | [payload] failed_post thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:04,994 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:05,194 | INFO     | [job] control thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:08,096 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:10,630 | INFO     | [monitor] cgroup control has ended
[2025-12-09 08:18:33] 2025-12-09 07:18:12,785 | INFO     | job.realtimelogging is not enabled
[2025-12-09 08:18:33] 2025-12-09 07:18:13,791 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 08:18:33] 2025-12-09 07:18:15,893 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139797225252672)>', '<ExcThread(monitor, started 139796705941248)>']
[2025-12-09 08:18:33] 2025-12-09 07:18:20,920 | INFO     | all workflow threads have been joined
[2025-12-09 08:18:33] 2025-12-09 07:18:20,921 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 08:18:33] 2025-12-09 07:18:20,922 | INFO     | traces error code: 0
[2025-12-09 08:18:33] 2025-12-09 07:18:20,922 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 08:18:33] 2025-12-09 07:18:32,454 | INFO     | 31838s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-09 08:18:33] 2025-12-09 07:18:33,511 | INFO     | PID=3083901 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-09 08:18:33] 2025-12-09 07:18:33,511 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 08:18:33] 2025-12-09 07:18:33,511 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 08:18:33] 2025-12-09 07:18:33,511 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 08:18:33] 2025-12-09 07:18:33,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 08:18:33] 2025-12-09 07:18:33,511 | INFO     | [monitor] control thread has ended
[2025-12-09 08:18:33] 2025-12-09 07:18:33,555 [wrapper] ==== pilot stdout END ====
[2025-12-09 08:18:33] 2025-12-09 07:18:33,558 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 08:18:33] 2025-12-09 07:18:33,561 [wrapper] pilotpid: 3083901
[2025-12-09 08:18:33] 2025-12-09 07:18:33,563 [wrapper] Pilot exit status: 0
[2025-12-09 08:18:33] 2025-12-09 07:18:33,571 [wrapper] pandaids: 6900935592
[2025-12-09 08:18:33] 2025-12-09 07:18:33,587 [wrapper] cleanup supervisor_pilot 3145808 3083902
[2025-12-09 08:18:33] 2025-12-09 07:18:33,589 [wrapper] Test setup, not cleaning
[2025-12-09 08:18:33] 2025-12-09 07:18:33,592 [wrapper] apfmon messages muted
[2025-12-09 08:18:33] 2025-12-09 07:18:33,594 [wrapper] ==== wrapper stdout END ====
[2025-12-09 08:18:33] 2025-12-09 07:18:33,597 [wrapper] ==== wrapper stderr END ====
[2025-12-09 08:18:33]  *** Error codes and diagnostics ***
[2025-12-09 08:18:33]     "exeErrorCode": 0,
[2025-12-09 08:18:33]     "exeErrorDiag": "",
[2025-12-09 08:18:33]     "pilotErrorCode": 0,
[2025-12-09 08:18:33]     "pilotErrorDiag": "",
[2025-12-09 08:18:33]  *** Listing of results directory ***
[2025-12-09 08:18:33] total 1314340
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc    576529 Nov 28 01:58 pilot3.tar.gz
[2025-12-09 08:18:33] -rwx------ 1 boinc boinc     36292 Nov 28 02:00 runpilot2-wrapper.sh
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc      5112 Nov 28 02:01 queuedata.json
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc       100 Dec  8 23:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 08:18:33] -rwxr-xr-x 1 boinc boinc      7986 Dec  8 23:27 run_atlas
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc       105 Dec  8 23:27 job.xml
[2025-12-09 08:18:33] -rw-r--r-- 2 boinc boinc 410095096 Dec  8 23:27 EVNT.47483658._004465.pool.root.1
[2025-12-09 08:18:33] -rw-r--r-- 2 boinc boinc    590110 Dec  8 23:27 input.tar.gz
[2025-12-09 08:18:33] -rw-r--r-- 2 boinc boinc     15847 Dec  8 23:27 start_atlas.sh
[2025-12-09 08:18:33] drwxrwx--x 2 boinc boinc      4096 Dec  8 23:27 shared
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc         0 Dec  8 23:27 boinc_setup_complete
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc      6198 Dec  8 23:27 init_data.xml
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc         0 Dec  8 23:27 boinc_lockfile
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc      2787 Dec  8 23:27 pandaJob.out
[2025-12-09 08:18:33] -rw------- 1 boinc boinc    981538 Dec  8 23:27 agis_schedconf.cvmfs.json
[2025-12-09 08:18:33] drwx------ 5 boinc boinc      4096 Dec  8 23:27 pilot3
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc       531 Dec  9 08:14 boinc_task_state.xml
[2025-12-09 08:18:33] -rw------- 1 boinc boinc 920527178 Dec  9 08:17 HITS.47556185._002290.pool.root.1
[2025-12-09 08:18:33] -rw------- 1 boinc boinc      1020 Dec  9 08:17 memory_monitor_summary.json
[2025-12-09 08:18:33] -rw------- 1 boinc boinc   1516240 Dec  9 08:17 agis_ddmendpoints.agis.ALL.json
[2025-12-09 08:18:33] -rw------- 1 boinc boinc   1209372 Dec  9 08:17 log.47556185._002290.job.log.tgz.1
[2025-12-09 08:18:33] -rw------- 1 boinc boinc      8576 Dec  9 08:18 heartbeat.json
[2025-12-09 08:18:33] -rw------- 1 boinc boinc        95 Dec  9 08:18 pilot_heartbeat.json
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc      8192 Dec  9 08:18 boinc_mmap_file
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc        28 Dec  9 08:18 wrapper_checkpoint.txt
[2025-12-09 08:18:33] -rw------- 1 boinc boinc       863 Dec  9 08:18 pilotlog.txt
[2025-12-09 08:18:33] -rw------- 1 boinc boinc   4477416 Dec  9 08:18 log.47556185._002290.job.log.1
[2025-12-09 08:18:33] -rw------- 1 boinc boinc       353 Dec  9 08:18 output.list
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc       620 Dec  9 08:18 runtime_log
[2025-12-09 08:18:33] -rw------- 1 boinc boinc   5703680 Dec  9 08:18 result.tar.gz
[2025-12-09 08:18:33] -rw------- 1 boinc boinc       665 Dec  9 08:18 sCrLDmo11i8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmK1KKDmwzS2Dm.diag
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc      8898 Dec  9 08:18 runtime_log.err
[2025-12-09 08:18:33] -rw-r--r-- 1 boinc boinc      6752 Dec  9 08:18 stderr.txt
[2025-12-09 08:18:33] HITS file was successfully produced:
[2025-12-09 08:18:33] -rw------- 1 boinc boinc 920527178 Dec  9 08:17 shared/HITS.pool.root.1
[2025-12-09 08:18:33]  *** Contents of shared directory: ***
[2025-12-09 08:18:33] total 1305616
[2025-12-09 08:18:33] -rw-r--r-- 2 boinc boinc 410095096 Dec  8 23:27 ATLAS.root_0
[2025-12-09 08:18:33] -rw-r--r-- 2 boinc boinc    590110 Dec  8 23:27 input.tar.gz
[2025-12-09 08:18:33] -rw-r--r-- 2 boinc boinc     15847 Dec  8 23:27 start_atlas.sh
[2025-12-09 08:18:33] -rw------- 1 boinc boinc 920527178 Dec  9 08:17 HITS.pool.root.1
[2025-12-09 08:18:33] -rw------- 1 boinc boinc   5703680 Dec  9 08:18 result.tar.gz
08:18:35 (3079607): run_atlas exited; CPU time 94145.942439
08:18:35 (3079607): called boinc_finish(0)

</stderr_txt>
]]>

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