Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:10:27 (4055801): wrapper (7.7.26015): starting
22:10:27 (4055801): wrapper: running run_atlas (--nthreads 3)
[2025-12-08 22:10:27] Arguments: --nthreads 3
[2025-12-08 22:10:27] Threads: 3
[2025-12-08 22:10:27] Checking for CVMFS
[2025-12-08 22:10:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 22:10:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 22:10:30] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 22:10:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 22:10:30] 2.9.2.0 4055997 0 30048 153780 3 1 18936036 36864001 0 130560 0 0 0.000 1292 1024 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-08 22:10:30] CVMFS is ok
[2025-12-08 22:10:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 22:10:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-08 22:10:30] Further information can be found at the LHC@home message board.
[2025-12-08 22:10:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 22:10:30] Checking for apptainer binary...
[2025-12-08 22:10:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 22:10:30] Running /usr/bin/apptainer --version
[2025-12-08 22:10:30] apptainer version 1.4.1-1.1
[2025-12-08 22:10:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 22:10:30] magicA246a
[2025-12-08 22:10:30] apptainer works
[2025-12-08 22:10:30] Set ATHENA_PROC_NUMBER=3
[2025-12-08 22:10:30] Set ATHENA_CORE_NUMBER=3
[2025-12-08 22:10:30] Starting ATLAS job with PandaID=6894267828
[2025-12-08 22:10:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 06:02:14]  *** The last 200 lines of the pilot log: ***
[2025-12-09 06:02:14] 2025-12-09 05:01:28,997 | INFO     | [payload] control thread has finished
[2025-12-09 06:02:14] 2025-12-09 05:01:29,063 | INFO     | [data] control thread has finished
[2025-12-09 06:02:14] 2025-12-09 05:01:29,167 | INFO     | [data] copytool_out thread has finished
[2025-12-09 06:02:14] 2025-12-09 05:01:29,444 | INFO     | [job] validate thread has finished
[2025-12-09 06:02:14] 2025-12-09 05:01:29,446 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 06:02:14] 2025-12-09 05:01:29,507 | INFO     | [payload] validate_post thread has finished
[2025-12-09 06:02:14] 2025-12-09 05:01:32,900 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 06:02:14] 2025-12-09 05:01:58,024 | INFO     | PID=4060073 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-09 06:02:14] 2025-12-09 05:01:58,024 | INFO     | found 0 job(s) in 20 queues
[2025-12-09 06:02:14] 2025-12-09 05:01:58,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-09 06:02:14] 2025-12-09 05:01:58,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-09 06:02:14] 2025-12-09 05:02:09,752 | INFO     | [monitor] cgroup control has ended
[2025-12-09 06:02:14] 2025-12-09 05:02:09,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630140643136)>', '<ExcThread(monitor, started 139629512615680)>']
[2025-12-09 06:02:14] 2025-12-09 05:02:10,089 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 06:02:14] 2025-12-09 05:02:10,089 | INFO     | [monitor] control thread has ended
[2025-12-09 06:02:14] 2025-12-09 05:02:14,853 | INFO     | all workflow threads have been joined
[2025-12-09 06:02:14] 2025-12-09 05:02:14,854 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 06:02:14] 2025-12-09 05:02:14,854 | INFO     | traces error code: 0
[2025-12-09 06:02:14] 2025-12-09 05:02:14,854 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 06:02:14] 2025-12-09 05:02:14,907 [wrapper] ==== pilot stdout END ====
[2025-12-09 06:02:14] 2025-12-09 05:02:14,909 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 06:02:14] 2025-12-09 05:02:14,912 [wrapper] pilotpid: 4060073
[2025-12-09 06:02:14] 2025-12-09 05:02:14,914 [wrapper] Pilot exit status: 0
[2025-12-09 06:02:14] 2025-12-09 05:02:14,921 [wrapper] pandaids: 6894267828
[2025-12-09 06:02:14] 2025-12-09 05:02:14,938 [wrapper] cleanup supervisor_pilot 4117952 4060074
[2025-12-09 06:02:14] 2025-12-09 05:02:14,941 [wrapper] Test setup, not cleaning
[2025-12-09 06:02:14] 2025-12-09 05:02:14,943 [wrapper] apfmon messages muted
[2025-12-09 06:02:14] 2025-12-09 05:02:14,945 [wrapper] ==== wrapper stdout END ====
[2025-12-09 06:02:14] 2025-12-09 05:02:14,948 [wrapper] ==== wrapper stderr END ====
[2025-12-09 06:02:14]  *** Error codes and diagnostics ***
[2025-12-09 06:02:14]     "exeErrorCode": 0,
[2025-12-09 06:02:14]     "exeErrorDiag": "",
[2025-12-09 06:02:14]     "pilotErrorCode": 0,
[2025-12-09 06:02:14]     "pilotErrorDiag": "",
[2025-12-09 06:02:14]  *** Listing of results directory ***
[2025-12-09 06:02:14] total 1307476
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc    576529 Nov 21 06:09 pilot3.tar.gz
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc      5112 Nov 21 06:29 queuedata.json
[2025-12-09 06:02:14] -rwx------ 1 boinc boinc     36292 Nov 21 06:30 runpilot2-wrapper.sh
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc       100 Dec  8 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 06:02:14] -rwxr-xr-x 1 boinc boinc      7986 Dec  8 22:10 run_atlas
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc       105 Dec  8 22:10 job.xml
[2025-12-09 06:02:14] -rw-r--r-- 2 boinc boinc 413170534 Dec  8 22:10 EVNT.47493127._002254.pool.root.1
[2025-12-09 06:02:14] -rw-r--r-- 2 boinc boinc    590104 Dec  8 22:10 input.tar.gz
[2025-12-09 06:02:14] -rw-r--r-- 2 boinc boinc     15847 Dec  8 22:10 start_atlas.sh
[2025-12-09 06:02:14] drwxrwx--x 2 boinc boinc      4096 Dec  8 22:10 shared
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc         0 Dec  8 22:10 boinc_setup_complete
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc      6448 Dec  8 22:10 init_data.xml
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc         0 Dec  8 22:10 boinc_lockfile
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc      2785 Dec  8 22:10 pandaJob.out
[2025-12-09 06:02:14] -rw------- 1 boinc boinc    981546 Dec  8 22:10 agis_schedconf.cvmfs.json
[2025-12-09 06:02:14] drwx------ 5 boinc boinc      4096 Dec  8 22:10 pilot3
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc       531 Dec  9 05:57 boinc_task_state.xml
[2025-12-09 06:02:14] -rw------- 1 boinc boinc 911516152 Dec  9 06:00 HITS.47533967._002259.pool.root.1
[2025-12-09 06:02:14] -rw------- 1 boinc boinc        95 Dec  9 06:00 pilot_heartbeat.json
[2025-12-09 06:02:14] -rw------- 1 boinc boinc      1034 Dec  9 06:01 memory_monitor_summary.json
[2025-12-09 06:02:14] -rw------- 1 boinc boinc   1516240 Dec  9 06:01 agis_ddmendpoints.agis.ALL.json
[2025-12-09 06:02:14] -rw------- 1 boinc boinc   1158607 Dec  9 06:01 log.47533967._002259.job.log.tgz.1
[2025-12-09 06:02:14] -rw------- 1 boinc boinc      8564 Dec  9 06:01 heartbeat.json
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc      8192 Dec  9 06:02 boinc_mmap_file
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc        28 Dec  9 06:02 wrapper_checkpoint.txt
[2025-12-09 06:02:14] -rw------- 1 boinc boinc      4752 Dec  9 06:02 pilotlog.txt
[2025-12-09 06:02:14] -rw------- 1 boinc boinc   3977888 Dec  9 06:02 log.47533967._002259.job.log.1
[2025-12-09 06:02:14] -rw------- 1 boinc boinc       353 Dec  9 06:02 output.list
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc       620 Dec  9 06:02 runtime_log
[2025-12-09 06:02:14] -rw------- 1 boinc boinc   5160960 Dec  9 06:02 result.tar.gz
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc      8918 Dec  9 06:02 runtime_log.err
[2025-12-09 06:02:14] -rw------- 1 boinc boinc       669 Dec  9 06:02 CYGODmOuYg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRNHKDmpGszIo.diag
[2025-12-09 06:02:14] -rw-r--r-- 1 boinc boinc      5395 Dec  9 06:02 stderr.txt
[2025-12-09 06:02:15] HITS file was successfully produced:
[2025-12-09 06:02:15] -rw------- 1 boinc boinc 911516152 Dec  9 06:00 shared/HITS.pool.root.1
[2025-12-09 06:02:15]  *** Contents of shared directory: ***
[2025-12-09 06:02:15] total 1299288
[2025-12-09 06:02:15] -rw-r--r-- 2 boinc boinc 413170534 Dec  8 22:10 ATLAS.root_0
[2025-12-09 06:02:15] -rw-r--r-- 2 boinc boinc    590104 Dec  8 22:10 input.tar.gz
[2025-12-09 06:02:15] -rw-r--r-- 2 boinc boinc     15847 Dec  8 22:10 start_atlas.sh
[2025-12-09 06:02:15] -rw------- 1 boinc boinc 911516152 Dec  9 06:00 HITS.pool.root.1
[2025-12-09 06:02:15] -rw------- 1 boinc boinc   5160960 Dec  9 06:02 result.tar.gz
06:02:16 (4055801): run_atlas exited; CPU time 83342.142439
06:02:16 (4055801): called boinc_finish(0)

</stderr_txt>
]]>

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