Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2025-12-09 02:14:58 (13320): vboxwrapper version 26210
2025-12-09 02:14:58 (13320): BOINC client version: 8.2.8
2025-12-09 02:14:58 (13320): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2025-12-09 02:14:59 (13320): Successfully copied 'init_data.xml' to the shared directory.
2025-12-09 02:14:59 (13320): Create VM. (boinc_9aa7641e80286632, slot#3)
2025-12-09 02:14:59 (13320): Setting Memory Size for VM. (4600MB)
2025-12-09 02:15:00 (13320): Setting CPU Count for VM. (6)
2025-12-09 02:15:00 (13320): Setting Chipset Options for VM.
2025-12-09 02:15:00 (13320): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-12-09 02:15:00 (13320): Setting Boot Options for VM.
2025-12-09 02:15:01 (13320): Setting Network Configuration for NAT. (Driver: virtio)
2025-12-09 02:15:01 (13320): Enabling VM Network Access.
2025-12-09 02:15:02 (13320): Disabling USB Support for VM.
2025-12-09 02:15:02 (13320): Disabling COM Port Support for VM.
2025-12-09 02:15:02 (13320): Disabling LPT Port Support for VM.
2025-12-09 02:15:02 (13320): Disabling Audio Support for VM.
2025-12-09 02:15:03 (13320): Disabling Clipboard Support for VM.
2025-12-09 02:15:03 (13320): Disabling Drag and Drop Support for VM.
2025-12-09 02:15:03 (13320): Adding storage controller(s) to VM.
2025-12-09 02:15:03 (13320): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-12-09 02:15:04 (13320): Adding VirtualBox Guest Additions to VM.
2025-12-09 02:15:04 (13320): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-12-09 02:15:04 (13320): forwarding host port 36302 to guest port 80
2025-12-09 02:15:05 (13320): Enabling remote desktop for VM.
2025-12-09 02:15:05 (13320): Enabling shared directory for VM.
2025-12-09 02:15:06 (13320): Starting VM using VBoxManage interface. (boinc_9aa7641e80286632, slot#3)
2025-12-09 02:15:10 (13320): Successfully started VM. (PID = '1700')
2025-12-09 02:15:10 (13320): Reporting VM Process ID to BOINC.
2025-12-09 02:15:10 (13320): Guest Log: BIOS: VirtualBox 7.2.4
2025-12-09 02:15:10 (13320): Guest Log: CPUID EDX: 0x178bfbff
2025-12-09 02:15:10 (13320): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-12-09 02:15:10 (13320): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-12-09 02:15:10 (13320): VM state change detected. (old = 'poweredoff', new = 'running')
2025-12-09 02:15:10 (13320): Detected: Web Application Enabled (http://localhost:36302)
2025-12-09 02:15:10 (13320): Detected: Remote Desktop Enabled (localhost:36303)
2025-12-09 02:15:10 (13320): Preference change detected
2025-12-09 02:15:10 (13320): Setting CPU throttle for VM. (97%)
2025-12-09 02:15:10 (13320): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-12-09 02:15:12 (13320): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-12-09 02:15:12 (13320): Guest Log: BIOS: Booting from Hard Disk...
2025-12-09 02:15:14 (13320): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-12-09 02:15:14 (13320): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-12-09 02:15:14 (13320): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-12-09 02:15:18 (13320): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-12-09 02:15:18 (13320): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-12-09 02:15:21 (13320): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-12-09 02:15:21 (13320): Guest Log: 00:00:00.000065 main     Log opened 2025-12-09T02:15:20.023747000Z
2025-12-09 02:15:21 (13320): Guest Log: 00:00:00.000137 main     OS Product: Linux
2025-12-09 02:15:21 (13320): Guest Log: 00:00:00.000154 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-12-09 02:15:21 (13320): Guest Log: 00:00:00.000167 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-12-09 02:15:21 (13320): Guest Log: 00:00:00.000181 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-12-09 02:15:21 (13320): Guest Log: 00:00:00.000181 main     Process ID: 1341
2025-12-09 02:15:21 (13320): Guest Log: 00:00:00.000181 main     Package type: LINUX_64BITS_GENERIC
2025-12-09 02:15:21 (13320): Guest Log: 00:00:00.000603 main     5.2.32 r132073 started. Verbose level = 0
2025-12-09 02:15:21 (13320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-12-09 02:15:21 (13320): Guest Log: [INFO] Mounting shared directory
2025-12-09 02:15:21 (13320): Guest Log: [INFO] Checking for init_data.xml
2025-12-09 02:15:30 (13320): Guest Log: 00:00:10.027926 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 223 217 000ns (GuestNow=1 765 242 930 802 171 000 ns GuestLast=1 765 246 520 025 388 000 ns fSetTimeLastLoop=true )
2025-12-09 02:15:45 (13320): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-12-09 02:15:45 (13320): Guest Log: [INFO] Detected branch: prod
2025-12-09 02:15:45 (13320): Guest Log: This is the prod version of the ATLAS job wrapper
2025-12-09 02:15:45 (13320): Guest Log: Copying input files
2025-12-09 02:15:46 (13320): Guest Log: Copied input files into RunAtlas.
2025-12-09 02:15:46 (13320): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-12-09 02:15:46 (13320): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-12-09 02:15:46 (13320): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-12-09 02:15:46 (13320): Guest Log: Further information can be found at the LHC@home message board.
2025-12-09 02:15:54 (13320): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-12-09 02:15:54 (13320): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-12-09 02:15:54 (13320): Guest Log: 2.6.3.0 1621 0 32208 153788 4 1 3117640 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-12-09 02:15:54 (13320): Guest Log: copied the webapp to /var/www
2025-12-09 02:15:54 (13320): Guest Log: ATHENA_PROC_NUMBER=6
2025-12-09 02:15:54 (13320): Guest Log: ATHENA_CORE_NUMBER=6
2025-12-09 02:15:54 (13320): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-12-09 02:15:54 (13320): Guest Log:  *** Starting ATLAS job. (PandaID=6893858642 taskID=47523449) ***
2025-12-09 03:55:12 (13320): Status Report: Elapsed Time: '6000.000000'
2025-12-09 03:55:12 (13320): Status Report: CPU Time: '33647.984375'
2025-12-09 05:35:14 (13320): Status Report: Elapsed Time: '12000.000000'
2025-12-09 05:35:14 (13320): Status Report: CPU Time: '69000.421875'
2025-12-09 06:16:17 (13320): Guest Log:  *** Job finished ***
2025-12-09 06:16:17 (13320): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:47,128 | INFO     | all workflow threads have been joined
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:47,128 | INFO     | end of generic workflow (traces error code: 0)
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:47,128 | INFO     | traces error code: 0
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:47,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,024 | INFO     | PID=6037 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,024 | INFO     | found 0 job(s) in 20 queues
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,024 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,025 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,025 | INFO     | [monitor] control thread has ended
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,063 [wrapper] ==== pilot stdout END ====
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,065 [wrapper] ==== wrapper stdout RESUME ====
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,067 [wrapper] pilotpid: 6037
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,070 [wrapper] Pilot exit status: 0
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,076 [wrapper] pandaids: 6893858642
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,089 [wrapper] cleanup supervisor_pilot 17564 6038
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,092 [wrapper] Test setup, not cleaning
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,094 [wrapper] apfmon messages muted
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,095 [wrapper] ==== wrapper stdout END ====
2025-12-09 06:16:17 (13320): Guest Log: 2025-12-09 05:18:51,097 [wrapper] ==== wrapper stderr END ====
2025-12-09 06:16:17 (13320): Guest Log:  *** Error codes and diagnostics ***
2025-12-09 06:16:17 (13320): Guest Log:     "exeErrorCode": 0,
2025-12-09 06:16:17 (13320): Guest Log:     "exeErrorDiag": "",
2025-12-09 06:16:17 (13320): Guest Log:     "pilotErrorCode": 0,
2025-12-09 06:16:17 (13320): Guest Log:     "pilotErrorDiag": "",
2025-12-09 06:16:17 (13320): Guest Log:  *** Listing of results directory ***
2025-12-09 06:16:17 (13320): Guest Log: total 905664
2025-12-09 06:16:17 (13320): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 13:12 pilot3.tar.gz
2025-12-09 06:16:17 (13320): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 13:23 runpilot2-wrapper.sh
2025-12-09 06:16:17 (13320): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 13:23 queuedata.json
2025-12-09 06:16:17 (13320): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Dec  9 01:15 start_atlas.sh
2025-12-09 06:16:17 (13320): Guest Log: -rwxr-xr-x. 1 atlas atlas    590097 Dec  9 01:15 input.tar.gz
2025-12-09 06:16:17 (13320): Guest Log: -rwxr-xr-x. 1 atlas atlas      8940 Dec  9 01:15 init_data.xml
2025-12-09 06:16:17 (13320): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Dec  9 01:15 EVNT.47493127._000518.pool.root.1 -> /data/./ATLAS.root_0
2025-12-09 06:16:17 (13320): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Dec  9 01:15 pandaJob.out
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas    981530 Dec  9 01:16 agis_schedconf.cvmfs.json
2025-12-09 06:16:17 (13320): Guest Log: drwx------. 5 atlas atlas      4096 Dec  9 01:16 pilot3
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas 916703317 Dec  9 05:17 HITS.47523449._005173.pool.root.1
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas      1041 Dec  9 05:18 memory_monitor_summary.json
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas   1516240 Dec  9 05:18 agis_ddmendpoints.agis.ALL.json
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas   1348562 Dec  9 05:18 log.47523449._005173.job.log.tgz.1
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas      8635 Dec  9 05:18 heartbeat.json
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas        95 Dec  9 05:18 pilot_heartbeat.json
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas       744 Dec  9 05:18 pilotlog.txt
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas   2084001 Dec  9 05:18 log.47523449._005173.job.log.1
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas       353 Dec  9 05:18 output.list
2025-12-09 06:16:17 (13320): Guest Log: -rw-r--r--. 1 atlas atlas       620 Dec  9 05:18 runtime_log
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas   3450880 Dec  9 05:18 result.tar.gz
2025-12-09 06:16:17 (13320): Guest Log: -rw-r--r--. 1 atlas atlas      8762 Dec  9 05:18 runtime_log.err
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas       664 Dec  9 05:18 gXGLDmGoJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmciGKDmMsZuIm.diag
2025-12-09 06:16:17 (13320): Guest Log: Looking for outputfile HITS.47523449._005173.pool.root.1
2025-12-09 06:16:17 (13320): Guest Log: HITS file was successfully produced
2025-12-09 06:16:17 (13320): Guest Log: -rw-------. 1 atlas atlas 916703317 Dec  9 05:17 /home/atlas/RunAtlas/HITS.47523449._005173.pool.root.1
2025-12-09 06:16:18 (13320): Guest Log: Successfully finished the ATLAS job!
2025-12-09 06:16:18 (13320): Guest Log: Copying the results back to the shared directory!
2025-12-09 06:16:18 (13320): Guest Log:  *** Contents of shared directory: ***
2025-12-09 06:16:18 (13320): Guest Log: total 1297608
2025-12-09 06:16:18 (13320): Guest Log: -rwxrwxrwx. 1 root root 407969351 Dec  9 01:14 ATLAS.root_0
2025-12-09 06:16:18 (13320): Guest Log: -rwxrwxrwx. 1 root root 916703317 Dec  9 05:16 HITS.pool.root.1
2025-12-09 06:16:18 (13320): Guest Log: -rwxrwxrwx. 1 root root      8940 Dec  9 01:14 init_data.xml
2025-12-09 06:16:18 (13320): Guest Log: -rwxrwxrwx. 1 root root    590097 Dec  8 21:10 input.tar.gz
2025-12-09 06:16:18 (13320): Guest Log: -rwxrwxrwx. 1 root root   3450880 Dec  9 05:16 result.tar.gz
2025-12-09 06:16:18 (13320): Guest Log: -rwxrwxrwx. 1 root root     15847 Dec  8 21:10 start_atlas.sh
2025-12-09 06:16:18 (13320): Guest Log:  *** Success! Shutting down the machine. ***
2025-12-09 06:16:18 (13320): VM Completion File Detected.
2025-12-09 06:16:18 (13320): Powering off VM.
2025-12-09 06:16:19 (13320): Successfully stopped VM.
2025-12-09 06:16:19 (13320): Deregistering VM. (boinc_9aa7641e80286632, slot#3)
2025-12-09 06:16:19 (13320): Removing network bandwidth throttle group from VM.
2025-12-09 06:16:19 (13320): Removing VM from VirtualBox.
2025-12-09 06:16:24 (13320): called boinc_finish(0)

</stderr_txt>
]]>

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