Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:55:45 (3394744): wrapper (7.7.26015): starting
21:55:45 (3394744): wrapper: running run_atlas (--nthreads 3)
[2025-12-08 21:55:45] Arguments: --nthreads 3
[2025-12-08 21:55:45] Threads: 3
[2025-12-08 21:55:45] Checking for CVMFS
[2025-12-08 21:55:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 21:55:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 21:55:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 21:55:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 21:55:46] 2.9.2.0 3364679 129 52308 153780 2 56 18509675 36864001 0 130560 0 77032 99.969 7856 11742 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-08 21:55:46] CVMFS is ok
[2025-12-08 21:55:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 21:55:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-08 21:55:46] Further information can be found at the LHC@home message board.
[2025-12-08 21:55:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 21:55:46] Checking for apptainer binary...
[2025-12-08 21:55:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 21:55:46] Running /usr/bin/apptainer --version
[2025-12-08 21:55:46] apptainer version 1.4.1-1.1
[2025-12-08 21:55:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 21:55:46] thA312a
[2025-12-08 21:55:46] apptainer works
[2025-12-08 21:55:46] Set ATHENA_PROC_NUMBER=3
[2025-12-08 21:55:46] Set ATHENA_CORE_NUMBER=3
[2025-12-08 21:55:46] Starting ATLAS job with PandaID=6905167927
[2025-12-08 21:55:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-09 04:48:27]  *** The last 200 lines of the pilot log: ***
[2025-12-09 04:48:27] 2025-12-09 03:47:49,416 | INFO     | aborting loop
[2025-12-09 04:48:27] 2025-12-09 03:47:49,464 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-09 04:48:27] 2025-12-09 03:47:49,782 | INFO     | all job control threads have been joined
[2025-12-09 04:48:27] 2025-12-09 03:47:49,917 | INFO     | all payload control threads have been joined
[2025-12-09 04:48:27] 2025-12-09 03:47:49,920 | INFO     | all data control threads have been joined
[2025-12-09 04:48:27] 2025-12-09 03:47:50,421 | INFO     | [job] retrieve thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:50,422 | INFO     | [job] job monitor thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:50,422 | INFO     | [job] queue monitor thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:50,787 | INFO     | [job] control thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:50,922 | INFO     | [payload] control thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:50,926 | INFO     | [data] control thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:50,952 | INFO     | [payload] execute_payloads thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:51,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:51,411 | INFO     | [data] copytool_in thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:51,471 | INFO     | [data] copytool_out thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:51,540 | INFO     | [job] validate thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:51,540 | INFO     | [payload] validate_pre thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:51,571 | INFO     | [job] create_data_payload thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:51,680 | INFO     | [payload] validate_post thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:51,899 | INFO     | [payload] failed_post thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:47:52,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-09 04:48:27] 2025-12-09 03:47:56,845 | INFO     | [data] queue_monitor thread has finished
[2025-12-09 04:48:27] 2025-12-09 03:48:21,296 | INFO     | [monitor] cgroup control has ended
[2025-12-09 04:48:27] 2025-12-09 03:48:21,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171497731904)>', '<ExcThread(monitor, started 140170863036160)>']
[2025-12-09 04:48:27] 2025-12-09 03:48:22,595 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-09 04:48:27] 2025-12-09 03:48:22,595 | INFO     | [monitor] control thread has ended
[2025-12-09 04:48:27] 2025-12-09 03:48:26,972 | INFO     | all workflow threads have been joined
[2025-12-09 04:48:27] 2025-12-09 03:48:26,973 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-09 04:48:27] 2025-12-09 03:48:26,973 | INFO     | traces error code: 0
[2025-12-09 04:48:27] 2025-12-09 03:48:26,973 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-09 04:48:27] 2025-12-09 03:48:27,024 [wrapper] ==== pilot stdout END ====
[2025-12-09 04:48:27] 2025-12-09 03:48:27,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-09 04:48:27] 2025-12-09 03:48:27,030 [wrapper] pilotpid: 3398461
[2025-12-09 04:48:27] 2025-12-09 03:48:27,032 [wrapper] Pilot exit status: 0
[2025-12-09 04:48:27] 2025-12-09 03:48:27,039 [wrapper] pandaids: 6905167927
[2025-12-09 04:48:27] 2025-12-09 03:48:27,056 [wrapper] cleanup supervisor_pilot 3450765 3398462
[2025-12-09 04:48:27] 2025-12-09 03:48:27,059 [wrapper] Test setup, not cleaning
[2025-12-09 04:48:27] 2025-12-09 03:48:27,061 [wrapper] apfmon messages muted
[2025-12-09 04:48:27] 2025-12-09 03:48:27,064 [wrapper] ==== wrapper stdout END ====
[2025-12-09 04:48:27] 2025-12-09 03:48:27,066 [wrapper] ==== wrapper stderr END ====
[2025-12-09 04:48:27]  *** Error codes and diagnostics ***
[2025-12-09 04:48:27]     "exeErrorCode": 0,
[2025-12-09 04:48:27]     "exeErrorDiag": "",
[2025-12-09 04:48:27]     "pilotErrorCode": 0,
[2025-12-09 04:48:27]     "pilotErrorDiag": "",
[2025-12-09 04:48:27]  *** Listing of results directory ***
[2025-12-09 04:48:27] total 1085396
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc      5112 Nov 30 01:16 queuedata.json
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc    576529 Nov 30 01:16 pilot3.tar.gz
[2025-12-09 04:48:27] -rwx------ 1 boinc boinc     36292 Nov 30 01:16 runpilot2-wrapper.sh
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc       100 Dec  8 21:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-09 04:48:27] -rwxr-xr-x 1 boinc boinc      7986 Dec  8 21:55 run_atlas
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc       105 Dec  8 21:55 job.xml
[2025-12-09 04:48:27] -rw-r--r-- 2 boinc boinc 378318269 Dec  8 21:55 EVNT.47528871._000081.pool.root.1
[2025-12-09 04:48:27] -rw-r--r-- 2 boinc boinc    590134 Dec  8 21:55 input.tar.gz
[2025-12-09 04:48:27] -rw-r--r-- 2 boinc boinc     15847 Dec  8 21:55 start_atlas.sh
[2025-12-09 04:48:27] drwxrwx--x 2 boinc boinc      4096 Dec  8 21:55 shared
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc         0 Dec  8 21:55 boinc_setup_complete
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc      6448 Dec  8 21:55 init_data.xml
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc         0 Dec  8 21:55 boinc_lockfile
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc      2879 Dec  8 21:55 pandaJob.out
[2025-12-09 04:48:27] -rw------- 1 boinc boinc    981546 Dec  8 21:55 agis_schedconf.cvmfs.json
[2025-12-09 04:48:27] drwx------ 5 boinc boinc      4096 Dec  8 21:55 pilot3
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc       531 Dec  9 04:44 boinc_task_state.xml
[2025-12-09 04:48:27] -rw------- 1 boinc boinc        95 Dec  9 04:46 pilot_heartbeat.json
[2025-12-09 04:48:27] -rw------- 1 boinc boinc 719836047 Dec  9 04:47 HITS.47538113._002500.pool.root.1
[2025-12-09 04:48:27] -rw------- 1 boinc boinc      1015 Dec  9 04:47 memory_monitor_summary.json
[2025-12-09 04:48:27] -rw------- 1 boinc boinc   1516240 Dec  9 04:47 agis_ddmendpoints.agis.ALL.json
[2025-12-09 04:48:27] -rw------- 1 boinc boinc   1197584 Dec  9 04:47 log.47538113._002500.job.log.tgz.1
[2025-12-09 04:48:27] -rw------- 1 boinc boinc     27962 Dec  9 04:47 heartbeat.json
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc      8192 Dec  9 04:48 boinc_mmap_file
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc        28 Dec  9 04:48 wrapper_checkpoint.txt
[2025-12-09 04:48:27] -rw------- 1 boinc boinc      4556 Dec  9 04:48 pilotlog.txt
[2025-12-09 04:48:27] -rw------- 1 boinc boinc   3485563 Dec  9 04:48 log.47538113._002500.job.log.1
[2025-12-09 04:48:27] -rw------- 1 boinc boinc       353 Dec  9 04:48 output.list
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc       620 Dec  9 04:48 runtime_log
[2025-12-09 04:48:27] -rw------- 1 boinc boinc   4720640 Dec  9 04:48 result.tar.gz
[2025-12-09 04:48:27] -rw------- 1 boinc boinc       666 Dec  9 04:48 wsyNDmbIkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9EPKDm7cTnDm.diag
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc      8903 Dec  9 04:48 runtime_log.err
[2025-12-09 04:48:27] -rw-r--r-- 1 boinc boinc      6381 Dec  9 04:48 stderr.txt
[2025-12-09 04:48:27] HITS file was successfully produced:
[2025-12-09 04:48:27] -rw------- 1 boinc boinc 719836047 Dec  9 04:47 shared/HITS.pool.root.1
[2025-12-09 04:48:27]  *** Contents of shared directory: ***
[2025-12-09 04:48:27] total 1077636
[2025-12-09 04:48:27] -rw-r--r-- 2 boinc boinc 378318269 Dec  8 21:55 ATLAS.root_0
[2025-12-09 04:48:27] -rw-r--r-- 2 boinc boinc    590134 Dec  8 21:55 input.tar.gz
[2025-12-09 04:48:27] -rw-r--r-- 2 boinc boinc     15847 Dec  8 21:55 start_atlas.sh
[2025-12-09 04:48:27] -rw------- 1 boinc boinc 719836047 Dec  9 04:47 HITS.pool.root.1
[2025-12-09 04:48:27] -rw------- 1 boinc boinc   4720640 Dec  9 04:48 result.tar.gz
04:48:28 (3394744): run_atlas exited; CPU time 72664.928716
04:48:28 (3394744): called boinc_finish(0)

</stderr_txt>
]]>

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