Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:59:23 (22462): wrapper (7.7.26015): starting
12:59:23 (22462): wrapper: running run_atlas (--nthreads 8)
[2025-12-08 12:59:23] Arguments: --nthreads 8
[2025-12-08 12:59:23] Threads: 8
[2025-12-08 12:59:23] Checking for CVMFS
[2025-12-08 12:59:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 12:59:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 12:59:24] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 12:59:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 12:59:24] 2.11.2.0 2787 179162 86292 153775 3 1 16887694 20275201 1 130560 2 70241701 99.945 8006890 24619 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-08 12:59:24] CVMFS is ok
[2025-12-08 12:59:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 12:59:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-08 12:59:24] Further information can be found at the LHC@home message board.
[2025-12-08 12:59:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 12:59:24] Checking for apptainer binary...
[2025-12-08 12:59:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 12:59:24] Running /usr/bin/apptainer --version
[2025-12-08 12:59:24] apptainer version 1.3.2-1.el7
[2025-12-08 12:59:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 12:59:25] c-115-2.aglt2.org
[2025-12-08 12:59:25] apptainer works
[2025-12-08 12:59:25] Set ATHENA_PROC_NUMBER=8
[2025-12-08 12:59:25] Set ATHENA_CORE_NUMBER=8
[2025-12-08 12:59:25] Starting ATLAS job with PandaID=6899134338
[2025-12-08 12:59:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 22:42:46]  *** The last 200 lines of the pilot log: ***
[2025-12-08 22:42:46] 2025-12-09 03:42:00,894 | INFO     | time since job start (34937s) is within the limit (172800.0s)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,415 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-08 22:42:46] 2025-12-09 03:42:01,419 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-12-08 22:42:46] 2025-12-09 03:42:01,421 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6899134338/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,422 | INFO     | extracted standard info from prmon json
[2025-12-08 22:42:46] 2025-12-09 03:42:01,422 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 22:42:46] 2025-12-09 03:42:01,422 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 22:42:46] 2025-12-09 03:42:01,432 | INFO     | fitting pss+swap vs Time
[2025-12-08 22:42:46] 2025-12-09 03:42:01,433 | INFO     | sum of square deviations: 58032162018.85832
[2025-12-08 22:42:46] 2025-12-09 03:42:01,439 | INFO     | sum of deviations: 661111052169.4545
[2025-12-08 22:42:46] 2025-12-09 03:42:01,439 | INFO     | mean x: 1765234236.9842658
[2025-12-08 22:42:46] 2025-12-09 03:42:01,439 | INFO     | mean y: 3612784.272727273
[2025-12-08 22:42:46] 2025-12-09 03:42:01,440 | INFO     | intersect: -20106199139.656193
[2025-12-08 22:42:46] 2025-12-09 03:42:01,440 | INFO     | chi2: 5.33579422591573
[2025-12-08 22:42:46] 2025-12-09 03:42:01,441 | INFO     | sum of square deviations: 56523697287.67557
[2025-12-08 22:42:46] 2025-12-09 03:42:01,447 | INFO     | sum of deviations: 856211853856.7781
[2025-12-08 22:42:46] 2025-12-09 03:42:01,447 | INFO     | mean x: 1765234084.4885361
[2025-12-08 22:42:46] 2025-12-09 03:42:01,447 | INFO     | mean y: 3632476.888888889
[2025-12-08 22:42:46] 2025-12-09 03:42:01,447 | INFO     | intersect: -26735848846.825775
[2025-12-08 22:42:46] 2025-12-09 03:42:01,448 | INFO     | chi2: 3.0317501903787956
[2025-12-08 22:42:46] 2025-12-09 03:42:01,448 | INFO     | current chi2=3.0317501903787956 (change=43.1809012488954 %)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,449 | INFO     | sum of square deviations: 55041536335.936035
[2025-12-08 22:42:46] 2025-12-09 03:42:01,455 | INFO     | sum of deviations: 878051524138.9329
[2025-12-08 22:42:46] 2025-12-09 03:42:01,455 | INFO     | mean x: 1765233931.9893239
[2025-12-08 22:42:46] 2025-12-09 03:42:01,455 | INFO     | mean y: 3634707.822064057
[2025-12-08 22:42:46] 2025-12-09 03:42:01,455 | INFO     | intersect: -28156304996.350594
[2025-12-08 22:42:46] 2025-12-09 03:42:01,456 | INFO     | chi2: 2.905233238414091
[2025-12-08 22:42:46] 2025-12-09 03:42:01,456 | INFO     | current chi2=2.905233238414091 (change=4.173066513402183 %)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,456 | INFO     | right removable region: 561
[2025-12-08 22:42:46] 2025-12-09 03:42:01,456 | INFO     | sum of square deviations: 56523528317.675575
[2025-12-08 22:42:46] 2025-12-09 03:42:01,463 | INFO     | sum of deviations: 430112574451.01215
[2025-12-08 22:42:46] 2025-12-09 03:42:01,463 | INFO     | mean x: 1765234389.4885361
[2025-12-08 22:42:46] 2025-12-09 03:42:01,463 | INFO     | mean y: 3636108.6172839506
[2025-12-08 22:42:46] 2025-12-09 03:42:01,463 | INFO     | intersect: -13428814595.896656
[2025-12-08 22:42:46] 2025-12-09 03:42:01,464 | INFO     | chi2: 2.566716587454138
[2025-12-08 22:42:46] 2025-12-09 03:42:01,464 | INFO     | current chi2=2.566716587454138 (change=51.89625988596593 %)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,464 | INFO     | sum of square deviations: 55041267203.97161
[2025-12-08 22:42:46] 2025-12-09 03:42:01,470 | INFO     | sum of deviations: 392870784117.4577
[2025-12-08 22:42:46] 2025-12-09 03:42:01,471 | INFO     | mean x: 1765234541.9928825
[2025-12-08 22:42:46] 2025-12-09 03:42:01,471 | INFO     | mean y: 3639936.8647686834
[2025-12-08 22:42:46] 2025-12-09 03:42:01,471 | INFO     | intersect: -12596162245.994923
[2025-12-08 22:42:46] 2025-12-09 03:42:01,471 | INFO     | chi2: 2.5338196063428415
[2025-12-08 22:42:46] 2025-12-09 03:42:01,472 | INFO     | current chi2=2.5338196063428415 (change=1.2816756346257292 %)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,472 | INFO     | left removable region: 20
[2025-12-08 22:42:46] 2025-12-09 03:42:01,472 | INFO     | sum of square deviations: 49098985291.23829
[2025-12-08 22:42:46] 2025-12-09 03:42:01,478 | INFO     | sum of deviations: 555071128733.7007
[2025-12-08 22:42:46] 2025-12-09 03:42:01,478 | INFO     | mean x: 1765234511.495379
[2025-12-08 22:42:46] 2025-12-09 03:42:01,478 | INFO     | mean y: 3668362.6802218114
[2025-12-08 22:42:46] 2025-12-09 03:42:01,478 | INFO     | intersect: -19952563053.578262
[2025-12-08 22:42:46] 2025-12-09 03:42:01,479 | INFO     | chi2: 0.05947536085429271
[2025-12-08 22:42:46] 2025-12-09 03:42:01,479 | INFO     | current memory leak: 11.31 B/s (using 541 data points, chi2=0.06)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,479 | INFO     | could have reported an average CPU frequency of 2378 MHz (22 samples)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | ..............................
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | . Timing measurements:
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | . get job = 0 s
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | . initial setup = 2 s
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | . payload setup = 15 s
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | . stage-in = 0 s
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | . payload execution = 34889 s
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | . stage-out = 3 s
[2025-12-08 22:42:46] 2025-12-09 03:42:01,480 | INFO     | . log creation = 0 s
[2025-12-08 22:42:46] 2025-12-09 03:42:01,481 | INFO     | ..............................
[2025-12-08 22:42:46] 2025-12-09 03:42:01,563 | INFO     | 
[2025-12-08 22:42:46] 2025-12-09 03:42:01,563 | INFO     | job summary report
[2025-12-08 22:42:46] 2025-12-09 03:42:01,563 | INFO     | --------------------------------------------------
[2025-12-08 22:42:46] 2025-12-09 03:42:01,563 | INFO     | PanDA job id: 6899134338
[2025-12-08 22:42:46] 2025-12-09 03:42:01,564 | INFO     | task id: 47531058
[2025-12-08 22:42:46] 2025-12-09 03:42:01,564 | INFO     | errors: (none)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,564 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 22:42:46] 2025-12-09 03:42:01,564 | INFO     | pilot state: finished 
[2025-12-08 22:42:46] 2025-12-09 03:42:01,564 | INFO     | transexitcode: 0
[2025-12-08 22:42:46] 2025-12-09 03:42:01,565 | INFO     | exeerrorcode: 0
[2025-12-08 22:42:46] 2025-12-09 03:42:01,565 | INFO     | exeerrordiag: 
[2025-12-08 22:42:46] 2025-12-09 03:42:01,565 | INFO     | exitcode: 0
[2025-12-08 22:42:46] 2025-12-09 03:42:01,565 | INFO     | exitmsg: OK
[2025-12-08 22:42:46] 2025-12-09 03:42:01,565 | INFO     | cpuconsumptiontime: 271436 s
[2025-12-08 22:42:46] 2025-12-09 03:42:01,565 | INFO     | nevents: 1000
[2025-12-08 22:42:46] 2025-12-09 03:42:01,565 | INFO     | neventsw: 0
[2025-12-08 22:42:46] 2025-12-09 03:42:01,566 | INFO     | pid: 994
[2025-12-08 22:42:46] 2025-12-09 03:42:01,566 | INFO     | pgrp: 994
[2025-12-08 22:42:46] 2025-12-09 03:42:01,566 | INFO     | corecount: 8
[2025-12-08 22:42:46] 2025-12-09 03:42:01,566 | INFO     | event service: False
[2025-12-08 22:42:46] 2025-12-09 03:42:01,566 | INFO     | sizes: {0: 2284453, 6: 2284715, 11: 2284743, 34908: 2344875, 34911: 2353869, 34914: 2353925, 34921: 2354299}
[2025-12-08 22:42:46] 2025-12-09 03:42:01,567 | INFO     | --------------------------------------------------
[2025-12-08 22:42:46] 2025-12-09 03:42:01,567 | INFO     | 
[2025-12-08 22:42:46] 2025-12-09 03:42:01,567 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-08 22:42:46] 2025-12-09 03:42:01,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,593 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,596 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 22:42:46] 2025-12-09 03:42:01,596 | INFO     | job 6899134338 has completed (purged errors)
[2025-12-08 22:42:46] 2025-12-09 03:42:01,596 | INFO     | overall cleanup function is called
[2025-12-08 22:42:46] 2025-12-09 03:42:02,004 | INFO     | PID=26209 has CPU usage=11.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-08 22:42:46] 2025-12-09 03:42:02,611 | INFO     | --- collectZombieJob: --- 10, [994]
[2025-12-08 22:42:46] 2025-12-09 03:42:02,611 | INFO     | zombie collector waiting for pid 994
[2025-12-08 22:42:46] 2025-12-09 03:42:02,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 22:42:46] 2025-12-09 03:42:02,612 | INFO     | collected zombie processes
[2025-12-08 22:42:46] 2025-12-09 03:42:02,612 | INFO     | will attempt to kill all subprocesses of pid=994
[2025-12-08 22:42:46] 2025-12-09 03:42:02,699 | INFO     | process IDs to be killed: [994] (in reverse order)
[2025-12-08 22:42:46] 2025-12-09 03:42:02,752 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 22:42:46] 2025-12-09 03:42:02,753 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 22:42:46] 2025-12-09 03:42:02,757 | INFO     | did not find any defunct processes belonging to 994
[2025-12-08 22:42:46] 2025-12-09 03:42:02,760 | INFO     | did not find any defunct processes belonging to 994
[2025-12-08 22:42:46] 2025-12-09 03:42:02,762 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 22:42:46] 2025-12-09 03:42:02,763 | INFO     | ready for new job
[2025-12-08 22:42:46] 2025-12-09 03:42:02,763 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 22:42:46] 2025-12-09 03:42:02,765 | INFO     | ***************************************
[2025-12-08 22:42:46] 2025-12-09 03:42:02,766 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 22:42:46] 2025-12-09 03:42:02,766 | INFO     | ***************************************
[2025-12-08 22:42:46] 2025-12-09 03:42:02,766 | INFO     | 
[2025-12-08 22:42:46] 2025-12-09 03:42:02,766 | INFO     | architecture information:
[2025-12-08 22:42:46] 2025-12-09 03:42:02,767 | INFO     | executing command: cat /etc/os-release
[2025-12-08 22:42:46] 2025-12-09 03:42:02,786 | INFO     | cat /etc/os-release:
[2025-12-08 22:42:46] NAME="CentOS Linux"
[2025-12-08 22:42:46] VERSION="7 (Core)"
[2025-12-08 22:42:46] ID="centos"
[2025-12-08 22:42:46] ID_LIKE="rhel fedora"
[2025-12-08 22:42:46] VERSION_ID="7"
[2025-12-08 22:42:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 22:42:46] ANSI_COLOR="0;31"
[2025-12-08 22:42:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 22:42:46] HOME_URL="https://www.centos.org/"
[2025-12-08 22:42:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 22:42:46] 
[2025-12-08 22:42:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 22:42:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 22:42:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 22:42:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 22:42:46] 
[2025-12-08 22:42:46] 2025-12-09 03:42:02,787 | INFO     | ***************************************
[2025-12-08 22:42:46] 2025-12-09 03:42:03,290 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-08 22:42:46] 2025-12-09 03:42:03,309 | INFO     | sufficient remaining disk space (17748197376 B)
[2025-12-08 22:42:46] 2025-12-09 03:42:03,310 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 22:42:46] 2025-12-09 03:42:03,310 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 22:42:46] 2025-12-09 03:42:03,310 | INFO     | update_server=False
[2025-12-08 22:42:46] 2025-12-09 03:42:03,311 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 22:42:46] 2025-12-09 03:42:03,311 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 22:42:46] 2025-12-09 03:42:03,364 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-08 22:42:46] 2025-12-09 03:42:03,365 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-08 22:42:46] 2025-12-09 03:42:03,365 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 22:42:46] 2025-12-09 03:42:03,365 | INFO     | will abort loop
[2025-12-08 22:42:46] 2025-12-09 03:42:03,771 | INFO     | all job control threads have been joined
[2025-12-08 22:42:46] 2025-12-09 03:42:03,854 | INFO     | all payload control threads have been joined
[2025-12-08 22:42:46] 2025-12-09 03:42:03,905 | INFO     | all data control threads have been joined
[2025-12-08 22:42:46] 2025-12-09 03:42:04,316 | INFO     | [job] retrieve thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,317 | INFO     | [job] queue monitor thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,367 | INFO     | [job] job monitor thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,570 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,777 | INFO     | [job] control thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,788 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 22:42:46] 2025-12-09 03:42:04,828 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,860 | INFO     | [payload] control thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,894 | INFO     | [payload] failed_post thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,911 | INFO     | [data] control thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:04,927 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:05,024 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 22:42:46] 2025-12-09 03:42:05,520 | INFO     | [job] validate thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:05,651 | INFO     | [payload] validate_post thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:05,660 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:05,769 | INFO     | [data] copytool_in thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:06,789 | INFO     | [data] copytool_out thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:09,030 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 22:42:46] 2025-12-09 03:42:34,191 | INFO     | PID=26209 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-08 22:42:46] 2025-12-09 03:42:34,191 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 22:42:46] 2025-12-09 03:42:34,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 22:42:46] 2025-12-09 03:42:34,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 22:42:46] 2025-12-09 03:42:40,812 | INFO     | [monitor] cgroup control has ended
[2025-12-08 22:42:46] 2025-12-09 03:42:40,944 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002918455104)>', '<ExcThread(monitor, started 140001950025472)>']
[2025-12-08 22:42:46] 2025-12-09 03:42:41,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 22:42:46] 2025-12-09 03:42:41,228 | INFO     | [monitor] control thread has ended
[2025-12-08 22:42:46] 2025-12-09 03:42:45,950 | INFO     | all workflow threads have been joined
[2025-12-08 22:42:46] 2025-12-09 03:42:45,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 22:42:46] 2025-12-09 03:42:45,951 | INFO     | traces error code: 0
[2025-12-08 22:42:46] 2025-12-09 03:42:45,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 22:42:46] 2025-12-09 03:42:46,058 [wrapper] ==== pilot stdout END ====
[2025-12-08 22:42:46] 2025-12-09 03:42:46,063 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 22:42:46] 2025-12-09 03:42:46,067 [wrapper] pilotpid: 26209
[2025-12-08 22:42:46] 2025-12-09 03:42:46,072 [wrapper] Pilot exit status: 0
[2025-12-08 22:42:46] 2025-12-09 03:42:46,089 [wrapper] pandaids: 6899134338
[2025-12-08 22:42:46] 2025-12-09 03:42:46,138 [wrapper] cleanup supervisor_pilot 24944 26210
[2025-12-08 22:42:46] 2025-12-09 03:42:46,143 [wrapper] Test setup, not cleaning
[2025-12-08 22:42:46] 2025-12-09 03:42:46,148 [wrapper] apfmon messages muted
[2025-12-08 22:42:46] 2025-12-09 03:42:46,153 [wrapper] ==== wrapper stdout END ====
[2025-12-08 22:42:46] 2025-12-09 03:42:46,157 [wrapper] ==== wrapper stderr END ====
[2025-12-08 22:42:46]  *** Error codes and diagnostics ***
[2025-12-08 22:42:46]     "exeErrorCode": 0,
[2025-12-08 22:42:46]     "exeErrorDiag": "",
[2025-12-08 22:42:46]     "pilotErrorCode": 0,
[2025-12-08 22:42:46]     "pilotErrorDiag": "",
[2025-12-08 22:42:46]  *** Listing of results directory ***
[2025-12-08 22:42:46] total 1073084
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-08 22:42:46] -rwx------ 1 boincer umatlas     36292 Nov 28 17:46 runpilot2-wrapper.sh
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 17:49 queuedata.json
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas       100 Dec  8 12:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 22:42:46] -rwxr-xr-x 1 boincer umatlas      7986 Dec  8 12:59 run_atlas
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas       105 Dec  8 12:59 job.xml
[2025-12-08 22:42:46] -rw-r--r-- 2 boincer umatlas 376968514 Dec  8 12:59 EVNT.47531050._000511.pool.root.1
[2025-12-08 22:42:46] -rw-r--r-- 2 boincer umatlas     15847 Dec  8 12:59 start_atlas.sh
[2025-12-08 22:42:46] drwxrwx--x 2 boincer umatlas      4096 Dec  8 12:59 shared
[2025-12-08 22:42:46] -rw-r--r-- 2 boincer umatlas    590120 Dec  8 12:59 input.tar.gz
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas         0 Dec  8 12:59 boinc_lockfile
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas      2880 Dec  8 12:59 pandaJob.out
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas        57 Dec  8 12:59 setup.sh.local
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas    981422 Dec  8 12:59 agis_schedconf.cvmfs.json
[2025-12-08 22:42:46] drwx------ 5 boincer umatlas      4096 Dec  8 12:59 pilot3
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas       533 Dec  8 22:33 boinc_task_state.xml
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas      5911 Dec  8 22:37 init_data.xml
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas 704422480 Dec  8 22:41 HITS.47531058._001282.pool.root.1
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas      1065 Dec  8 22:41 memory_monitor_summary.json
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas        95 Dec  8 22:41 pilot_heartbeat.json
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas   1516240 Dec  8 22:41 agis_ddmendpoints.agis.ALL.json
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas   1946306 Dec  8 22:41 log.47531058._001282.job.log.tgz.1
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas     27752 Dec  8 22:42 heartbeat.json
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas        29 Dec  8 22:42 wrapper_checkpoint.txt
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas      8192 Dec  8 22:42 boinc_mmap_file
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas      4932 Dec  8 22:42 pilotlog.txt
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas   4799146 Dec  8 22:42 log.47531058._001282.job.log.1
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas       353 Dec  8 22:42 output.list
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas       620 Dec  8 22:42 runtime_log
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas   6789120 Dec  8 22:42 result.tar.gz
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas      9338 Dec  8 22:42 runtime_log.err
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas       667 Dec  8 22:42 NwWMDmZPMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFcLKDmeAEU9n.diag
[2025-12-08 22:42:46] -rw-r--r-- 1 boincer umatlas     21361 Dec  8 22:42 stderr.txt
[2025-12-08 22:42:46] HITS file was successfully produced:
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas 704422480 Dec  8 22:41 shared/HITS.pool.root.1
[2025-12-08 22:42:46]  *** Contents of shared directory: ***
[2025-12-08 22:42:46] total 1063288
[2025-12-08 22:42:46] -rw-r--r-- 2 boincer umatlas 376968514 Dec  8 12:59 ATLAS.root_0
[2025-12-08 22:42:46] -rw-r--r-- 2 boincer umatlas     15847 Dec  8 12:59 start_atlas.sh
[2025-12-08 22:42:46] -rw-r--r-- 2 boincer umatlas    590120 Dec  8 12:59 input.tar.gz
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas 704422480 Dec  8 22:41 HITS.pool.root.1
[2025-12-08 22:42:46] -rw------- 1 boincer umatlas   6789120 Dec  8 22:42 result.tar.gz
22:42:47 (22462): run_atlas exited; CPU time 269397.843650
22:42:47 (22462): called boinc_finish(0)

</stderr_txt>
]]>

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