Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:36:54 (11859): wrapper (7.7.26015): starting
12:36:54 (11859): wrapper: running run_atlas (--nthreads 8)
[2025-12-08 12:36:54] Arguments: --nthreads 8
[2025-12-08 12:36:54] Threads: 8
[2025-12-08 12:36:54] Checking for CVMFS
[2025-12-08 12:36:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 12:36:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 12:36:55] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 12:36:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 12:36:55] 2.11.2.0 2797 83303 88848 153775 3 1 14581649 20275201 1 130560 0 21700060 99.852 4779502 31512 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-08 12:36:55] CVMFS is ok
[2025-12-08 12:36:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 12:36:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-08 12:36:55] Further information can be found at the LHC@home message board.
[2025-12-08 12:36:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 12:36:55] Checking for apptainer binary...
[2025-12-08 12:36:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-08 12:36:55] Running /usr/bin/apptainer --version
[2025-12-08 12:36:55] apptainer version 1.3.2-1.el7
[2025-12-08 12:36:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 12:36:56] c-204-11.aglt2.org
[2025-12-08 12:36:56] apptainer works
[2025-12-08 12:36:57] Set ATHENA_PROC_NUMBER=8
[2025-12-08 12:36:57] Set ATHENA_CORE_NUMBER=8
[2025-12-08 12:36:57] Starting ATLAS job with PandaID=6923224024
[2025-12-08 12:36:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 16:01:55]  *** The last 200 lines of the pilot log: ***
[2025-12-08 16:01:55] 2025-12-08 21:01:16,356 | INFO     | monitor loop #897: job 0:6923224024 is in state 'finished'
[2025-12-08 16:01:55] 2025-12-08 21:01:16,357 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:01:55] 2025-12-08 21:01:17,995 | INFO     | time since job start (12242s) is within the limit (174528.0s)
[2025-12-08 16:01:55] 2025-12-08 21:01:18,860 | INFO     | monitor loop #898: job 0:6923224024 is in state 'finished'
[2025-12-08 16:01:55] 2025-12-08 21:01:18,867 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:01:55] 2025-12-08 21:01:20,000 | INFO     | time since job start (12245s) is within the limit (174528.0s)
[2025-12-08 16:01:55] 2025-12-08 21:01:21,370 | INFO     | monitor loop #899: job 0:6923224024 is in state 'finished'
[2025-12-08 16:01:55] 2025-12-08 21:01:21,370 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:01:55] 2025-12-08 21:01:22,006 | INFO     | time since job start (12247s) is within the limit (174528.0s)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,313 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-08 16:01:55] 2025-12-08 21:01:23,317 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-12-08 16:01:55] 2025-12-08 21:01:23,319 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6923224024/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,320 | INFO     | extracted standard info from prmon json
[2025-12-08 16:01:55] 2025-12-08 21:01:23,320 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 16:01:55] 2025-12-08 21:01:23,321 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 16:01:55] 2025-12-08 21:01:23,321 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-08 16:01:55] 2025-12-08 21:01:23,321 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-08 16:01:55] 2025-12-08 21:01:23,325 | INFO     | fitting pss+swap vs Time
[2025-12-08 16:01:55] 2025-12-08 21:01:23,326 | INFO     | sum of square deviations: 2480604650.0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,327 | INFO     | sum of deviations: 228611895.9999969
[2025-12-08 16:01:55] 2025-12-08 21:01:23,327 | INFO     | mean x: 1765221535.5
[2025-12-08 16:01:55] 2025-12-08 21:01:23,327 | INFO     | mean y: 2555651.43
[2025-12-08 16:01:55] 2025-12-08 21:01:23,327 | INFO     | intersect: -160126718.003872
[2025-12-08 16:01:55] 2025-12-08 21:01:23,328 | INFO     | chi2: 1.6442714715021756
[2025-12-08 16:01:55] 2025-12-08 21:01:23,328 | INFO     | sum of square deviations: 2299168690.0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,331 | INFO     | sum of deviations: 247480355.00000176
[2025-12-08 16:01:55] 2025-12-08 21:01:23,331 | INFO     | mean x: 1765221383.0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,331 | INFO     | mean y: 2555667.2666666666
[2025-12-08 16:01:55] 2025-12-08 21:01:23,331 | INFO     | intersect: -187451101.8836361
[2025-12-08 16:01:55] 2025-12-08 21:01:23,332 | INFO     | chi2: 1.644343976207462
[2025-12-08 16:01:55] 2025-12-08 21:01:23,332 | INFO     | current chi2=1.644343976207462 (change=-0.0044095337383848 %)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,332 | INFO     | right removable region: 194
[2025-12-08 16:01:55] 2025-12-08 21:01:23,333 | INFO     | sum of square deviations: 2299168690.0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,334 | INFO     | sum of deviations: -30347532635.0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,334 | INFO     | mean x: 1765221688.0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,335 | INFO     | mean y: 2581057.328205128
[2025-12-08 16:01:55] 2025-12-08 21:01:23,335 | INFO     | intersect: 23302360241.686264
[2025-12-08 16:01:55] 2025-12-08 21:01:23,335 | INFO     | chi2: 0.20429283540786838
[2025-12-08 16:01:55] 2025-12-08 21:01:23,335 | INFO     | current chi2=0.20429283540786838 (change=87.5754801473731 %)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,335 | INFO     | sum of square deviations: 2126802667.5
[2025-12-08 16:01:55] 2025-12-08 21:01:23,337 | INFO     | sum of deviations: -31656763648.500004
[2025-12-08 16:01:55] 2025-12-08 21:01:23,337 | INFO     | mean x: 1765221840.5
[2025-12-08 16:01:55] 2025-12-08 21:01:23,337 | INFO     | mean y: 2582166.8789473684
[2025-12-08 16:01:55] 2025-12-08 21:01:23,338 | INFO     | intersect: 26277333203.168343
[2025-12-08 16:01:55] 2025-12-08 21:01:23,338 | INFO     | chi2: 0.17714684550505985
[2025-12-08 16:01:55] 2025-12-08 21:01:23,338 | INFO     | current chi2=0.17714684550505985 (change=13.287783611506427 %)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,338 | INFO     | left removable region: 20
[2025-12-08 16:01:55] 2025-12-08 21:01:23,338 | INFO     | sum of square deviations: 1633472487.5
[2025-12-08 16:01:55] 2025-12-08 21:01:23,339 | INFO     | sum of deviations: -19326479848.5
[2025-12-08 16:01:55] 2025-12-08 21:01:23,339 | INFO     | mean x: 1765221962.5
[2025-12-08 16:01:55] 2025-12-08 21:01:23,340 | INFO     | mean y: 2571357.936781609
[2025-12-08 16:01:55] 2025-12-08 21:01:23,340 | INFO     | intersect: 20887849161.7883
[2025-12-08 16:01:55] 2025-12-08 21:01:23,340 | INFO     | chi2: 0.14943059583712168
[2025-12-08 16:01:55] 2025-12-08 21:01:23,340 | INFO     | current memory leak: -11.83 B/s (using 174 data points, chi2=0.15)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,341 | INFO     | could have reported an average CPU frequency of 2042 MHz (10 samples)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,341 | INFO     | ..............................
[2025-12-08 16:01:55] 2025-12-08 21:01:23,341 | INFO     | . Timing measurements:
[2025-12-08 16:01:55] 2025-12-08 21:01:23,342 | INFO     | . get job = 0 s
[2025-12-08 16:01:55] 2025-12-08 21:01:23,342 | INFO     | . initial setup = 2 s
[2025-12-08 16:01:55] 2025-12-08 21:01:23,342 | INFO     | . payload setup = 8 s
[2025-12-08 16:01:55] 2025-12-08 21:01:23,342 | INFO     | . stage-in = 0 s
[2025-12-08 16:01:55] 2025-12-08 21:01:23,342 | INFO     | . payload execution = 12204 s
[2025-12-08 16:01:55] 2025-12-08 21:01:23,342 | INFO     | . stage-out = 2 s
[2025-12-08 16:01:55] 2025-12-08 21:01:23,342 | INFO     | . log creation = 0 s
[2025-12-08 16:01:55] 2025-12-08 21:01:23,342 | INFO     | ..............................
[2025-12-08 16:01:55] 2025-12-08 21:01:23,436 | INFO     | 
[2025-12-08 16:01:55] 2025-12-08 21:01:23,437 | INFO     | job summary report
[2025-12-08 16:01:55] 2025-12-08 21:01:23,437 | INFO     | --------------------------------------------------
[2025-12-08 16:01:55] 2025-12-08 21:01:23,437 | INFO     | PanDA job id: 6923224024
[2025-12-08 16:01:55] 2025-12-08 21:01:23,437 | INFO     | task id: 47838378
[2025-12-08 16:01:55] 2025-12-08 21:01:23,437 | INFO     | errors: (none)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,438 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 16:01:55] 2025-12-08 21:01:23,438 | INFO     | pilot state: finished 
[2025-12-08 16:01:55] 2025-12-08 21:01:23,438 | INFO     | transexitcode: 0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,438 | INFO     | exeerrorcode: 0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,438 | INFO     | exeerrordiag: 
[2025-12-08 16:01:55] 2025-12-08 21:01:23,438 | INFO     | exitcode: 0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,439 | INFO     | exitmsg: OK
[2025-12-08 16:01:55] 2025-12-08 21:01:23,439 | INFO     | cpuconsumptiontime: 92079 s
[2025-12-08 16:01:55] 2025-12-08 21:01:23,439 | INFO     | nevents: 400
[2025-12-08 16:01:55] 2025-12-08 21:01:23,439 | INFO     | neventsw: 0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,439 | INFO     | pid: 22057
[2025-12-08 16:01:55] 2025-12-08 21:01:23,439 | INFO     | pgrp: 22057
[2025-12-08 16:01:55] 2025-12-08 21:01:23,440 | INFO     | corecount: 8
[2025-12-08 16:01:55] 2025-12-08 21:01:23,440 | INFO     | event service: False
[2025-12-08 16:01:55] 2025-12-08 21:01:23,440 | INFO     | sizes: {0: 2283805, 1: 2284004, 7: 2284266, 12: 2284294, 12217: 2314045, 12219: 2323043, 12222: 2323227, 12232: 2323421}
[2025-12-08 16:01:55] 2025-12-08 21:01:23,440 | INFO     | --------------------------------------------------
[2025-12-08 16:01:55] 2025-12-08 21:01:23,440 | INFO     | 
[2025-12-08 16:01:55] 2025-12-08 21:01:23,441 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-08 16:01:55] 2025-12-08 21:01:23,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,469 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,469 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,470 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,471 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,472 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 16:01:55] 2025-12-08 21:01:23,472 | INFO     | job 6923224024 has completed (purged errors)
[2025-12-08 16:01:55] 2025-12-08 21:01:23,472 | INFO     | overall cleanup function is called
[2025-12-08 16:01:55] 2025-12-08 21:01:24,480 | INFO     | --- collectZombieJob: --- 10, [22057]
[2025-12-08 16:01:55] 2025-12-08 21:01:24,480 | INFO     | zombie collector waiting for pid 22057
[2025-12-08 16:01:55] 2025-12-08 21:01:24,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 16:01:55] 2025-12-08 21:01:24,481 | INFO     | collected zombie processes
[2025-12-08 16:01:55] 2025-12-08 21:01:24,481 | INFO     | will attempt to kill all subprocesses of pid=22057
[2025-12-08 16:01:55] 2025-12-08 21:01:24,575 | INFO     | process IDs to be killed: [22057] (in reverse order)
[2025-12-08 16:01:55] 2025-12-08 21:01:24,628 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 16:01:55] 2025-12-08 21:01:24,628 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 16:01:55] 2025-12-08 21:01:24,632 | INFO     | did not find any defunct processes belonging to 22057
[2025-12-08 16:01:55] 2025-12-08 21:01:24,635 | INFO     | did not find any defunct processes belonging to 22057
[2025-12-08 16:01:55] 2025-12-08 21:01:24,635 | INFO     | ready for new job
[2025-12-08 16:01:55] 2025-12-08 21:01:24,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 16:01:55] 2025-12-08 21:01:24,638 | INFO     | ***************************************
[2025-12-08 16:01:55] 2025-12-08 21:01:24,638 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2025-12-08 16:01:55] 2025-12-08 21:01:24,638 | INFO     | ***************************************
[2025-12-08 16:01:55] 2025-12-08 21:01:24,638 | INFO     | 
[2025-12-08 16:01:55] 2025-12-08 21:01:24,639 | INFO     | architecture information:
[2025-12-08 16:01:55] 2025-12-08 21:01:24,640 | INFO     | executing command: cat /etc/os-release
[2025-12-08 16:01:55] 2025-12-08 21:01:24,657 | INFO     | cat /etc/os-release:
[2025-12-08 16:01:55] NAME="CentOS Linux"
[2025-12-08 16:01:55] VERSION="7 (Core)"
[2025-12-08 16:01:55] ID="centos"
[2025-12-08 16:01:55] ID_LIKE="rhel fedora"
[2025-12-08 16:01:55] VERSION_ID="7"
[2025-12-08 16:01:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 16:01:55] ANSI_COLOR="0;31"
[2025-12-08 16:01:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 16:01:55] HOME_URL="https://www.centos.org/"
[2025-12-08 16:01:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 16:01:55] 
[2025-12-08 16:01:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 16:01:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 16:01:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 16:01:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 16:01:55] 
[2025-12-08 16:01:55] 2025-12-08 21:01:24,657 | INFO     | ***************************************
[2025-12-08 16:01:55] 2025-12-08 21:01:25,161 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-08 16:01:55] 2025-12-08 21:01:25,180 | INFO     | sufficient remaining disk space (18366857216 B)
[2025-12-08 16:01:55] 2025-12-08 21:01:25,180 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 16:01:55] 2025-12-08 21:01:25,180 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 16:01:55] 2025-12-08 21:01:25,181 | INFO     | update_server=False
[2025-12-08 16:01:55] 2025-12-08 21:01:25,181 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 16:01:55] 2025-12-08 21:01:25,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 16:01:55] 2025-12-08 21:01:25,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:01:55] 2025-12-08 21:01:25,182 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 16:01:55] 2025-12-08 21:01:25,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:01:55] 2025-12-08 21:01:25,183 | INFO     | aborting loop
[2025-12-08 16:01:55] 2025-12-08 21:01:25,767 | INFO     | all payload control threads have been joined
[2025-12-08 16:01:55] 2025-12-08 21:01:25,895 | INFO     | all data control threads have been joined
[2025-12-08 16:01:55] 2025-12-08 21:01:26,183 | INFO     | [job] retrieve thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:26,187 | INFO     | [job] queue monitor thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:26,188 | INFO     | [job] job monitor thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:26,696 | INFO     | [payload] failed_post thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:26,763 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:26,769 | INFO     | [payload] control thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:26,849 | INFO     | all job control threads have been joined
[2025-12-08 16:01:55] 2025-12-08 21:01:26,901 | INFO     | [data] control thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:27,187 | INFO     | [data] copytool_out thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:27,198 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:27,217 | INFO     | [job] validate thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:27,252 | INFO     | [data] copytool_in thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:27,274 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:27,333 | INFO     | [payload] validate_post thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:27,648 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:27,850 | INFO     | [job] control thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:29,189 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 16:01:55] 2025-12-08 21:01:34,345 | INFO     | [monitor] cgroup control has ended
[2025-12-08 16:01:55] 2025-12-08 21:01:34,690 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139873899796288)>', '<ExcThread(monitor, started 139873151330048)>']
[2025-12-08 16:01:55] 2025-12-08 21:01:39,697 | INFO     | all workflow threads have been joined
[2025-12-08 16:01:55] 2025-12-08 21:01:39,697 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 16:01:55] 2025-12-08 21:01:39,698 | INFO     | traces error code: 0
[2025-12-08 16:01:55] 2025-12-08 21:01:39,698 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 16:01:55] 2025-12-08 21:01:55,227 | INFO     | PID=15595 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-08 16:01:55] 2025-12-08 21:01:55,227 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 16:01:55] 2025-12-08 21:01:55,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 16:01:55] 2025-12-08 21:01:55,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 16:01:55] 2025-12-08 21:01:55,227 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 16:01:55] 2025-12-08 21:01:55,228 | CRITICAL | thread 'MainThread' is not alive
[2025-12-08 16:01:55] 2025-12-08 21:01:55,228 | INFO     | [monitor] control thread has ended
[2025-12-08 16:01:55] 2025-12-08 21:01:55,347 [wrapper] ==== pilot stdout END ====
[2025-12-08 16:01:55] 2025-12-08 21:01:55,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 16:01:55] 2025-12-08 21:01:55,356 [wrapper] pilotpid: 15595
[2025-12-08 16:01:55] 2025-12-08 21:01:55,360 [wrapper] Pilot exit status: 0
[2025-12-08 16:01:55] 2025-12-08 21:01:55,378 [wrapper] pandaids: 6923224024
[2025-12-08 16:01:55] 2025-12-08 21:01:55,420 [wrapper] cleanup supervisor_pilot 15495 15596
[2025-12-08 16:01:55] 2025-12-08 21:01:55,424 [wrapper] Test setup, not cleaning
[2025-12-08 16:01:55] 2025-12-08 21:01:55,429 [wrapper] apfmon messages muted
[2025-12-08 16:01:55] 2025-12-08 21:01:55,433 [wrapper] ==== wrapper stdout END ====
[2025-12-08 16:01:55] 2025-12-08 21:01:55,438 [wrapper] ==== wrapper stderr END ====
[2025-12-08 16:01:55]  *** Error codes and diagnostics ***
[2025-12-08 16:01:55]     "exeErrorCode": 0,
[2025-12-08 16:01:55]     "exeErrorDiag": "",
[2025-12-08 16:01:55]     "pilotErrorCode": 0,
[2025-12-08 16:01:55]     "pilotErrorDiag": "",
[2025-12-08 16:01:55]  *** Listing of results directory ***
[2025-12-08 16:01:55] total 542936
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas    579449 Dec  8 12:07 pilot3.tar.gz
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas      5112 Dec  8 12:31 queuedata.json
[2025-12-08 16:01:55] -rwx------ 1 boincer umatlas     36292 Dec  8 12:32 runpilot2-wrapper.sh
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas       100 Dec  8 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 16:01:55] -rwxr-xr-x 1 boincer umatlas      7986 Dec  8 12:36 run_atlas
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas       105 Dec  8 12:36 job.xml
[2025-12-08 16:01:55] -rw-r--r-- 2 boincer umatlas 295723405 Dec  8 12:36 EVNT.47838372._000005.pool.root.1
[2025-12-08 16:01:55] -rw-r--r-- 2 boincer umatlas     15847 Dec  8 12:36 start_atlas.sh
[2025-12-08 16:01:55] drwxrwx--x 2 boincer umatlas      4096 Dec  8 12:36 shared
[2025-12-08 16:01:55] -rw-r--r-- 2 boincer umatlas    592377 Dec  8 12:36 input.tar.gz
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas         0 Dec  8 12:36 boinc_lockfile
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas      2522 Dec  8 12:36 pandaJob.out
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas        57 Dec  8 12:36 setup.sh.local
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas    981422 Dec  8 12:37 agis_schedconf.cvmfs.json
[2025-12-08 16:01:55] drwx------ 5 boincer umatlas      4096 Dec  8 12:37 pilot3
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas 252088626 Dec  8 16:00 HITS.47838378._000111.pool.root.1
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas      5912 Dec  8 16:00 init_data.xml
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas       531 Dec  8 16:00 boinc_task_state.xml
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas      1050 Dec  8 16:01 memory_monitor_summary.json
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas   1516240 Dec  8 16:01 agis_ddmendpoints.agis.ALL.json
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas    430241 Dec  8 16:01 log.47838378._000111.job.log.tgz.1
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas        95 Dec  8 16:01 pilot_heartbeat.json
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas      7841 Dec  8 16:01 heartbeat.json
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas      8192 Dec  8 16:01 boinc_mmap_file
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas        28 Dec  8 16:01 wrapper_checkpoint.txt
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas       815 Dec  8 16:01 pilotlog.txt
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas   1690960 Dec  8 16:01 log.47838378._000111.job.log.1
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas       357 Dec  8 16:01 output.list
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas       620 Dec  8 16:01 runtime_log
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas   2140160 Dec  8 16:01 result.tar.gz
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas      9343 Dec  8 16:01 runtime_log.err
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas       663 Dec  8 16:01 MbNODmlGum8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWtMKDmuPkYSo.diag
[2025-12-08 16:01:55] -rw-r--r-- 1 boincer umatlas     21288 Dec  8 16:01 stderr.txt
[2025-12-08 16:01:55] HITS file was successfully produced:
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas 252088626 Dec  8 16:00 shared/HITS.pool.root.1
[2025-12-08 16:01:55]  *** Contents of shared directory: ***
[2025-12-08 16:01:55] total 537676
[2025-12-08 16:01:55] -rw-r--r-- 2 boincer umatlas 295723405 Dec  8 12:36 ATLAS.root_0
[2025-12-08 16:01:55] -rw-r--r-- 2 boincer umatlas     15847 Dec  8 12:36 start_atlas.sh
[2025-12-08 16:01:55] -rw-r--r-- 2 boincer umatlas    592377 Dec  8 12:36 input.tar.gz
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas 252088626 Dec  8 16:00 HITS.pool.root.1
[2025-12-08 16:01:55] -rw------- 1 boincer umatlas   2140160 Dec  8 16:01 result.tar.gz
16:01:56 (11859): run_atlas exited; CPU time 92023.278209
16:01:56 (11859): called boinc_finish(0)

</stderr_txt>
]]>

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