Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:27:12 (2325204): wrapper (7.7.26015): starting
20:27:12 (2325204): wrapper: running run_atlas (--nthreads 8)
[2025-12-07 20:27:12] Arguments: --nthreads 8
[2025-12-07 20:27:12] Threads: 8
[2025-12-07 20:27:12] Checking for CVMFS
[2025-12-07 20:27:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 20:27:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 20:27:12] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 20:27:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 20:27:13] 2.13.2.0 1657905 46877 201300 153748 0 60 36549468 40960001 30980 16776704 0 523672321 99.678 429813088 48031 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-07 20:27:13] CVMFS is ok
[2025-12-07 20:27:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 20:27:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-07 20:27:13] Further information can be found at the LHC@home message board.
[2025-12-07 20:27:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 20:27:13] Checking for apptainer binary...
[2025-12-07 20:27:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 20:27:13] Running /usr/bin/apptainer --version
[2025-12-07 20:27:13] apptainer version 1.4.4-1.el9
[2025-12-07 20:27:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 20:27:13] c-208-39.aglt2.org
[2025-12-07 20:27:13] apptainer works
[2025-12-07 20:27:13] Set ATHENA_PROC_NUMBER=8
[2025-12-07 20:27:13] Set ATHENA_CORE_NUMBER=8
[2025-12-07 20:27:13] Starting ATLAS job with PandaID=6897951963
[2025-12-07 20:27:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 02:01:14]  *** The last 200 lines of the pilot log: ***
[2025-12-08 02:01:14] 2025-12-08 07:00:29,046 | INFO     | monitor loop #1365: job 0:6897951963 is in state 'finished'
[2025-12-08 02:01:14] 2025-12-08 07:00:29,046 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,568 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-08 02:01:14] 2025-12-08 07:00:29,573 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3737.0910703125014
[2025-12-08 02:01:14] 2025-12-08 07:00:29,587 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897951963/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,587 | INFO     | extracted standard info from prmon json
[2025-12-08 02:01:14] 2025-12-08 07:00:29,587 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 02:01:14] 2025-12-08 07:00:29,587 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 02:01:14] 2025-12-08 07:00:29,592 | INFO     | fitting pss+swap vs Time
[2025-12-08 02:01:14] 2025-12-08 07:00:29,592 | INFO     | sum of square deviations: 10841747428.923586
[2025-12-08 02:01:14] 2025-12-08 07:00:29,593 | INFO     | sum of deviations: 110907334965.62398
[2025-12-08 02:01:14] 2025-12-08 07:00:29,594 | INFO     | mean x: 1765167243.3180428
[2025-12-08 02:01:14] 2025-12-08 07:00:29,594 | INFO     | mean y: 3437828.7247706424
[2025-12-08 02:01:14] 2025-12-08 07:00:29,594 | INFO     | intersect: -18053613952.683323
[2025-12-08 02:01:14] 2025-12-08 07:00:29,594 | INFO     | chi2: 3.998105068322535
[2025-12-08 02:01:14] 2025-12-08 07:00:29,594 | INFO     | sum of square deviations: 10351993220.909998
[2025-12-08 02:01:14] 2025-12-08 07:00:29,596 | INFO     | sum of deviations: 210203642779.7175
[2025-12-08 02:01:14] 2025-12-08 07:00:29,596 | INFO     | mean x: 1765167090.8229814
[2025-12-08 02:01:14] 2025-12-08 07:00:29,596 | INFO     | mean y: 3468654.065217391
[2025-12-08 02:01:14] 2025-12-08 07:00:29,596 | INFO     | intersect: -35839343902.68898
[2025-12-08 02:01:14] 2025-12-08 07:00:29,596 | INFO     | chi2: 1.91378378589012
[2025-12-08 02:01:14] 2025-12-08 07:00:29,596 | INFO     | current chi2=1.91378378589012 (change=52.132729050738114 %)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,596 | INFO     | sum of square deviations: 9877117946.08201
[2025-12-08 02:01:14] 2025-12-08 07:00:29,598 | INFO     | sum of deviations: 205572175153.49203
[2025-12-08 02:01:14] 2025-12-08 07:00:29,598 | INFO     | mean x: 1765166938.3123028
[2025-12-08 02:01:14] 2025-12-08 07:00:29,598 | INFO     | mean y: 3467158.8738170345
[2025-12-08 02:01:14] 2025-12-08 07:00:29,598 | INFO     | intersect: -36734902171.00045
[2025-12-08 02:01:14] 2025-12-08 07:00:29,598 | INFO     | chi2: 1.910338263973067
[2025-12-08 02:01:14] 2025-12-08 07:00:29,598 | INFO     | current chi2=1.910338263973067 (change=0.18003715688554153 %)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,598 | INFO     | right removable region: 316
[2025-12-08 02:01:14] 2025-12-08 07:00:29,599 | INFO     | sum of square deviations: 10351929780.909994
[2025-12-08 02:01:14] 2025-12-08 07:00:29,600 | INFO     | sum of deviations: 23573057750.369553
[2025-12-08 02:01:14] 2025-12-08 07:00:29,600 | INFO     | mean x: 1765167395.8229814
[2025-12-08 02:01:14] 2025-12-08 07:00:29,600 | INFO     | mean y: 3464868.7608695654
[2025-12-08 02:01:14] 2025-12-08 07:00:29,600 | INFO     | intersect: -4016113494.061717
[2025-12-08 02:01:14] 2025-12-08 07:00:29,600 | INFO     | chi2: 2.1652279554492537
[2025-12-08 02:01:14] 2025-12-08 07:00:29,600 | INFO     | current chi2=2.1652279554492537 (change=45.84364546583295 %)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,601 | INFO     | sum of square deviations: 9877089157.880177
[2025-12-08 02:01:14] 2025-12-08 07:00:29,601 | INFO     | time since job start (19975s) is within the limit (172800.0s)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,602 | INFO     | sum of deviations: 12963492322.151405
[2025-12-08 02:01:14] 2025-12-08 07:00:29,603 | INFO     | mean x: 1765167548.3280756
[2025-12-08 02:01:14] 2025-12-08 07:00:29,603 | INFO     | mean y: 3468268.690851735
[2025-12-08 02:01:14] 2025-12-08 07:00:29,603 | INFO     | intersect: -2313280683.788274
[2025-12-08 02:01:14] 2025-12-08 07:00:29,603 | INFO     | chi2: 2.154014146278289
[2025-12-08 02:01:14] 2025-12-08 07:00:29,603 | INFO     | current chi2=2.154014146278289 (change=0.517904322394447 %)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,603 | INFO     | left removable region: 20
[2025-12-08 02:01:14] 2025-12-08 07:00:29,603 | INFO     | sum of square deviations: 8041199963.405375
[2025-12-08 02:01:14] 2025-12-08 07:00:29,606 | INFO     | sum of deviations: 95436388976.51358
[2025-12-08 02:01:14] 2025-12-08 07:00:29,606 | INFO     | mean x: 1765167517.8108108
[2025-12-08 02:01:14] 2025-12-08 07:00:29,606 | INFO     | mean y: 3503296.527027027
[2025-12-08 02:01:14] 2025-12-08 07:00:29,606 | INFO     | intersect: -20946257262.238846
[2025-12-08 02:01:14] 2025-12-08 07:00:29,606 | INFO     | chi2: 0.03271436877175006
[2025-12-08 02:01:14] 2025-12-08 07:00:29,607 | INFO     | current memory leak: 11.87 B/s (using 296 data points, chi2=0.03)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,607 | INFO     | could have reported an average CPU frequency of 3712 MHz (14 samples)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,607 | INFO     | ..............................
[2025-12-08 02:01:14] 2025-12-08 07:00:29,607 | INFO     | . Timing measurements:
[2025-12-08 02:01:14] 2025-12-08 07:00:29,608 | INFO     | . get job = 0 s
[2025-12-08 02:01:14] 2025-12-08 07:00:29,608 | INFO     | . initial setup = 2 s
[2025-12-08 02:01:14] 2025-12-08 07:00:29,608 | INFO     | . payload setup = 17 s
[2025-12-08 02:01:14] 2025-12-08 07:00:29,608 | INFO     | . stage-in = 0 s
[2025-12-08 02:01:14] 2025-12-08 07:00:29,608 | INFO     | . payload execution = 19922 s
[2025-12-08 02:01:14] 2025-12-08 07:00:29,608 | INFO     | . stage-out = 3 s
[2025-12-08 02:01:14] 2025-12-08 07:00:29,608 | INFO     | . log creation = 0 s
[2025-12-08 02:01:14] 2025-12-08 07:00:29,608 | INFO     | ..............................
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | 
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | job summary report
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | --------------------------------------------------
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | PanDA job id: 6897951963
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | task id: 47531111
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | errors: (none)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | pilot state: finished 
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | transexitcode: 0
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | exeerrorcode: 0
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | exeerrordiag: 
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | exitcode: 0
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | exitmsg: OK
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | cpuconsumptiontime: 121354 s
[2025-12-08 02:01:14] 2025-12-08 07:00:29,710 | INFO     | nevents: 1000
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | neventsw: 0
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | pid: 2338903
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | pgrp: 2338903
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | corecount: 8
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | event service: False
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | sizes: {0: 2284450, 7: 2284712, 11: 2284740, 19944: 2338325, 19947: 2347319, 19949: 2347375, 19956: 2347749}
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | --------------------------------------------------
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | 
[2025-12-08 02:01:14] 2025-12-08 07:00:29,711 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,739 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 02:01:14] 2025-12-08 07:00:29,740 | INFO     | job 6897951963 has completed (purged errors)
[2025-12-08 02:01:14] 2025-12-08 07:00:29,740 | INFO     | overall cleanup function is called
[2025-12-08 02:01:14] 2025-12-08 07:00:30,755 | INFO     | --- collectZombieJob: --- 10, [2338903]
[2025-12-08 02:01:14] 2025-12-08 07:00:30,755 | INFO     | zombie collector waiting for pid 2338903
[2025-12-08 02:01:14] 2025-12-08 07:00:30,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 02:01:14] 2025-12-08 07:00:30,756 | INFO     | collected zombie processes
[2025-12-08 02:01:14] 2025-12-08 07:00:30,756 | INFO     | will attempt to kill all subprocesses of pid=2338903
[2025-12-08 02:01:14] 2025-12-08 07:00:31,301 | INFO     | process IDs to be killed: [2338903] (in reverse order)
[2025-12-08 02:01:14] 2025-12-08 07:00:31,459 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 02:01:14] 2025-12-08 07:00:31,461 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 02:01:14] 2025-12-08 07:00:31,496 | INFO     | did not find any defunct processes belonging to 2338903
[2025-12-08 02:01:14] 2025-12-08 07:00:31,528 | INFO     | did not find any defunct processes belonging to 2338903
[2025-12-08 02:01:14] 2025-12-08 07:00:31,544 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 02:01:14] 2025-12-08 07:00:31,544 | INFO     | ready for new job
[2025-12-08 02:01:14] 2025-12-08 07:00:31,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 02:01:14] 2025-12-08 07:00:31,546 | INFO     | ***************************************
[2025-12-08 02:01:14] 2025-12-08 07:00:31,547 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 02:01:14] 2025-12-08 07:00:31,547 | INFO     | ***************************************
[2025-12-08 02:01:14] 2025-12-08 07:00:31,547 | INFO     | 
[2025-12-08 02:01:14] 2025-12-08 07:00:31,555 | INFO     | architecture information:
[2025-12-08 02:01:14] 2025-12-08 07:00:31,568 | INFO     | executing command: cat /etc/os-release
[2025-12-08 02:01:14] 2025-12-08 07:00:31,606 | INFO     | cat /etc/os-release:
[2025-12-08 02:01:14] NAME="CentOS Linux"
[2025-12-08 02:01:14] VERSION="7 (Core)"
[2025-12-08 02:01:14] ID="centos"
[2025-12-08 02:01:14] ID_LIKE="rhel fedora"
[2025-12-08 02:01:14] VERSION_ID="7"
[2025-12-08 02:01:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 02:01:14] ANSI_COLOR="0;31"
[2025-12-08 02:01:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 02:01:14] HOME_URL="https://www.centos.org/"
[2025-12-08 02:01:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 02:01:14] 
[2025-12-08 02:01:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 02:01:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 02:01:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 02:01:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 02:01:14] 
[2025-12-08 02:01:14] 2025-12-08 07:00:31,607 | INFO     | ***************************************
[2025-12-08 02:01:14] 2025-12-08 07:00:32,111 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-08 02:01:14] 2025-12-08 07:00:32,142 | INFO     | sufficient remaining disk space (172882919424 B)
[2025-12-08 02:01:14] 2025-12-08 07:00:32,143 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 02:01:14] 2025-12-08 07:00:32,143 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 02:01:14] 2025-12-08 07:00:32,143 | INFO     | update_server=False
[2025-12-08 02:01:14] 2025-12-08 07:00:32,143 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 02:01:14] 2025-12-08 07:00:32,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 02:01:14] 2025-12-08 07:00:32,254 | INFO     | all job control threads have been joined
[2025-12-08 02:01:14] 2025-12-08 07:00:32,442 | INFO     | all payload control threads have been joined
[2025-12-08 02:01:14] 2025-12-08 07:00:32,562 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 02:01:14] 2025-12-08 07:00:32,562 | INFO     | aborting loop
[2025-12-08 02:01:14] 2025-12-08 07:00:32,724 | INFO     | all data control threads have been joined
[2025-12-08 02:01:14] 2025-12-08 07:00:33,037 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 02:01:14] 2025-12-08 07:00:33,150 | INFO     | [job] retrieve thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,260 | INFO     | [job] control thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,263 | INFO     | [payload] validate_post thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,448 | INFO     | [payload] control thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,472 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,567 | INFO     | [job] job monitor thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,731 | INFO     | [data] control thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,830 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,830 | INFO     | [data] copytool_in thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,831 | INFO     | [job] validate thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:33,969 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:34,151 | INFO     | [data] copytool_out thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:34,600 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:34,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 02:01:14] 2025-12-08 07:00:34,738 | INFO     | [payload] failed_post thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:35,728 | INFO     | [job] queue monitor thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:00:37,046 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 02:01:14] 2025-12-08 07:01:03,298 | INFO     | PID=2330797 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 02:01:14] 2025-12-08 07:01:03,299 | INFO     | .. there are 38 such processes running
[2025-12-08 02:01:14] 2025-12-08 07:01:03,300 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 02:01:14] 2025-12-08 07:01:03,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 02:01:14] 2025-12-08 07:01:03,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 02:01:14] 2025-12-08 07:01:07,674 | INFO     | [monitor] cgroup control has ended
[2025-12-08 02:01:14] 2025-12-08 07:01:08,097 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750287345472)>', '<ExcThread(monitor, started 139749561980672)>']
[2025-12-08 02:01:14] 2025-12-08 07:01:08,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 02:01:14] 2025-12-08 07:01:08,332 | INFO     | [monitor] control thread has ended
[2025-12-08 02:01:14] 2025-12-08 07:01:13,125 | INFO     | all workflow threads have been joined
[2025-12-08 02:01:14] 2025-12-08 07:01:13,125 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 02:01:14] 2025-12-08 07:01:13,125 | INFO     | traces error code: 0
[2025-12-08 02:01:14] 2025-12-08 07:01:13,125 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 02:01:14] 2025-12-08 07:01:13,622 [wrapper] ==== pilot stdout END ====
[2025-12-08 02:01:14] 2025-12-08 07:01:13,627 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 02:01:14] 2025-12-08 07:01:13,635 [wrapper] pilotpid: 2330797
[2025-12-08 02:01:14] 2025-12-08 07:01:13,638 [wrapper] Pilot exit status: 0
[2025-12-08 02:01:14] 2025-12-08 07:01:13,662 [wrapper] pandaids: 6897951963
[2025-12-08 02:01:14] 2025-12-08 07:01:13,780 [wrapper] cleanup supervisor_pilot   60956 2330798
[2025-12-08 02:01:14] 2025-12-08 07:01:13,783 [wrapper] Test setup, not cleaning
[2025-12-08 02:01:14] 2025-12-08 07:01:13,786 [wrapper] apfmon messages muted
[2025-12-08 02:01:14] 2025-12-08 07:01:13,788 [wrapper] ==== wrapper stdout END ====
[2025-12-08 02:01:14] 2025-12-08 07:01:13,790 [wrapper] ==== wrapper stderr END ====
[2025-12-08 02:01:14]  *** Error codes and diagnostics ***
[2025-12-08 02:01:14]     "exeErrorCode": 0,
[2025-12-08 02:01:14]     "exeErrorDiag": "",
[2025-12-08 02:01:14]     "pilotErrorCode": 0,
[2025-12-08 02:01:14]     "pilotErrorDiag": "",
[2025-12-08 02:01:14]  *** Listing of results directory ***
[2025-12-08 02:01:14] total 1070796
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-08 02:01:14] -rwx------. 1 boincer umatlas     36292 Nov 28 17:46 runpilot2-wrapper.sh
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas      5112 Nov 28 17:49 queuedata.json
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas       100 Dec  7 20:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 02:01:14] -rwxr-xr-x. 1 boincer umatlas      7986 Dec  7 20:27 run_atlas
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas       105 Dec  7 20:27 job.xml
[2025-12-08 02:01:14] -rw-r--r--. 2 boincer umatlas 377378987 Dec  7 20:27 EVNT.47531104._000038.pool.root.1
[2025-12-08 02:01:14] -rw-r--r--. 2 boincer umatlas     15847 Dec  7 20:27 start_atlas.sh
[2025-12-08 02:01:14] drwxrwx--x. 2 boincer umatlas      4096 Dec  7 20:27 shared
[2025-12-08 02:01:14] -rw-r--r--. 2 boincer umatlas    590121 Dec  7 20:27 input.tar.gz
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas         0 Dec  7 20:27 boinc_lockfile
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas      2879 Dec  7 20:27 pandaJob.out
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas        57 Dec  7 20:27 setup.sh.local
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas    981509 Dec  7 20:27 agis_schedconf.cvmfs.json
[2025-12-08 02:01:14] drwx------. 5 boincer umatlas      4096 Dec  7 20:27 pilot3
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas       533 Dec  8 01:54 boinc_task_state.xml
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas      7174 Dec  8 01:56 init_data.xml
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas 706262793 Dec  8 01:59 HITS.47531111._000306.pool.root.1
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas      1061 Dec  8 02:00 memory_monitor_summary.json
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas   1516240 Dec  8 02:00 agis_ddmendpoints.agis.ALL.json
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas   1717526 Dec  8 02:00 log.47531111._000306.job.log.tgz.1
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas     28059 Dec  8 02:00 heartbeat.json
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas        95 Dec  8 02:01 pilot_heartbeat.json
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas      8192 Dec  8 02:01 boinc_mmap_file
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas        29 Dec  8 02:01 wrapper_checkpoint.txt
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas      4825 Dec  8 02:01 pilotlog.txt
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas   2734251 Dec  8 02:01 log.47531111._000306.job.log.1
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas       353 Dec  8 02:01 output.list
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas       620 Dec  8 02:01 runtime_log
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas   4495360 Dec  8 02:01 result.tar.gz
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas      9343 Dec  8 02:01 runtime_log.err
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas       665 Dec  8 02:01 M0cMDmjPMj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmavOKDmnB3Hln.diag
[2025-12-08 02:01:14] -rw-r--r--. 1 boincer umatlas     21335 Dec  8 02:01 stderr.txt
[2025-12-08 02:01:14] HITS file was successfully produced:
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas 706262793 Dec  8 01:59 shared/HITS.pool.root.1
[2025-12-08 02:01:14]  *** Contents of shared directory: ***
[2025-12-08 02:01:14] total 1063240
[2025-12-08 02:01:14] -rw-r--r--. 2 boincer umatlas 377378987 Dec  7 20:27 ATLAS.root_0
[2025-12-08 02:01:14] -rw-r--r--. 2 boincer umatlas     15847 Dec  7 20:27 start_atlas.sh
[2025-12-08 02:01:14] -rw-r--r--. 2 boincer umatlas    590121 Dec  7 20:27 input.tar.gz
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas 706262793 Dec  8 01:59 HITS.pool.root.1
[2025-12-08 02:01:14] -rw-------. 1 boincer umatlas   4495360 Dec  8 02:01 result.tar.gz
02:01:16 (2325204): run_atlas exited; CPU time 121414.343642
02:01:16 (2325204): called boinc_finish(0)

</stderr_txt>
]]>

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