Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:52:46 (3791124): wrapper (7.7.26015): starting
08:52:46 (3791124): wrapper: running run_atlas (--nthreads 8)
[2025-12-08 08:52:46] Arguments: --nthreads 8
[2025-12-08 08:52:46] Threads: 8
[2025-12-08 08:52:46] Checking for CVMFS
[2025-12-08 08:52:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-08 08:52:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-08 08:52:46] Running cvmfs_config stat atlas.cern.ch
[2025-12-08 08:52:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-08 08:52:46] 2.13.2.0 3627852 858 63424 153758 2 68 4039171 4097025 0 130560 0 407834 99.981 31796 28800 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-12-08 08:52:46] CVMFS is ok
[2025-12-08 08:52:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-08 08:52:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-08 08:52:46] Further information can be found at the LHC@home message board.
[2025-12-08 08:52:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-08 08:52:46] Checking for apptainer binary...
[2025-12-08 08:52:46] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-12-08 08:52:46] apptainer is not installed, using version from CVMFS
[2025-12-08 08:52:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-08 08:52:46] pckeatlas02
[2025-12-08 08:52:46] apptainer works
[2025-12-08 08:52:46] Set ATHENA_PROC_NUMBER=8
[2025-12-08 08:52:46] Set ATHENA_CORE_NUMBER=8
[2025-12-08 08:52:46] Starting ATLAS job with PandaID=6900935664
[2025-12-08 08:52:46] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 16:36:42]  *** The last 200 lines of the pilot log: ***
[2025-12-08 16:36:42] 2025-12-08 15:35:38,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,100 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-08 16:36:42] 2025-12-08 15:35:39,101 | INFO     | found 4 cores (4 cores per socket, 1 socket) HT, CPU MHz: 3843.00175
[2025-12-08 16:36:42] 2025-12-08 15:35:39,102 | INFO     | using path: /var/lib/boinc/slots/19/PanDA_Pilot-6900935664/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,102 | INFO     | extracted standard info from prmon json
[2025-12-08 16:36:42] 2025-12-08 15:35:39,102 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 16:36:42] 2025-12-08 15:35:39,102 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 16:36:42] 2025-12-08 15:35:39,105 | INFO     | fitting pss+swap vs Time
[2025-12-08 16:36:42] 2025-12-08 15:35:39,106 | INFO     | sum of square deviations: 29208584860.0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,108 | INFO     | sum of deviations: 370174377193.0001
[2025-12-08 16:36:42] 2025-12-08 15:35:39,108 | INFO     | mean x: 1765194237.0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,108 | INFO     | mean y: 3013945.1626373627
[2025-12-08 16:36:42] 2025-12-08 15:35:39,108 | INFO     | intersect: -22368137565.193283
[2025-12-08 16:36:42] 2025-12-08 15:35:39,108 | INFO     | chi2: 2.892831905080083
[2025-12-08 16:36:42] 2025-12-08 15:35:39,108 | INFO     | sum of square deviations: 28256204212.5
[2025-12-08 16:36:42] 2025-12-08 15:35:39,110 | INFO     | sum of deviations: 455827253486.0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,110 | INFO     | mean x: 1765194084.5
[2025-12-08 16:36:42] 2025-12-08 15:35:39,111 | INFO     | mean y: 3027599.56
[2025-12-08 16:36:42] 2025-12-08 15:35:39,111 | INFO     | intersect: -28472968870.32038
[2025-12-08 16:36:42] 2025-12-08 15:35:39,111 | INFO     | chi2: 1.421818784031988
[2025-12-08 16:36:42] 2025-12-08 15:35:39,111 | INFO     | current chi2=1.421818784031988 (change=50.85027990962276 %)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,111 | INFO     | sum of square deviations: 27324754190.0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,113 | INFO     | sum of deviations: 447515364815.9998
[2025-12-08 16:36:42] 2025-12-08 15:35:39,113 | INFO     | mean x: 1765193932.0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,113 | INFO     | mean y: 3026238.6741573033
[2025-12-08 16:36:42] 2025-12-08 15:35:39,113 | INFO     | intersect: -28906708903.20926
[2025-12-08 16:36:42] 2025-12-08 15:35:39,113 | INFO     | chi2: 1.4180241999682628
[2025-12-08 16:36:42] 2025-12-08 15:35:39,113 | INFO     | current chi2=1.4180241999682628 (change=0.26688239783726664 %)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,113 | INFO     | right removable region: 444
[2025-12-08 16:36:42] 2025-12-08 15:35:39,114 | INFO     | sum of square deviations: 28256204212.5
[2025-12-08 16:36:42] 2025-12-08 15:35:39,116 | INFO     | sum of deviations: 286809444278.50006
[2025-12-08 16:36:42] 2025-12-08 15:35:39,116 | INFO     | mean x: 1765194389.5
[2025-12-08 16:36:42] 2025-12-08 15:35:39,116 | INFO     | mean y: 3027232.513333333
[2025-12-08 16:36:42] 2025-12-08 15:35:39,116 | INFO     | intersect: -17914256281.17444
[2025-12-08 16:36:42] 2025-12-08 15:35:39,116 | INFO     | chi2: 1.6165982328181712
[2025-12-08 16:36:42] 2025-12-08 15:35:39,116 | INFO     | current chi2=1.6165982328181712 (change=44.11710442009182 %)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,116 | INFO     | sum of square deviations: 27324754190.0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,118 | INFO     | sum of deviations: 267822910170.99985
[2025-12-08 16:36:42] 2025-12-08 15:35:39,118 | INFO     | mean x: 1765194542.0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,118 | INFO     | mean y: 3030338.7617977527
[2025-12-08 16:36:42] 2025-12-08 15:35:39,118 | INFO     | intersect: -17298480810.034565
[2025-12-08 16:36:42] 2025-12-08 15:35:39,119 | INFO     | chi2: 1.607215051395754
[2025-12-08 16:36:42] 2025-12-08 15:35:39,119 | INFO     | current chi2=1.607215051395754 (change=0.5804275442055747 %)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,119 | INFO     | left removable region: 20
[2025-12-08 16:36:42] 2025-12-08 15:35:39,119 | INFO     | sum of square deviations: 23635978050.0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,121 | INFO     | sum of deviations: 315942519525.9999
[2025-12-08 16:36:42] 2025-12-08 15:35:39,121 | INFO     | mean x: 1765194511.5
[2025-12-08 16:36:42] 2025-12-08 15:35:39,121 | INFO     | mean y: 3048103.9905660376
[2025-12-08 16:36:42] 2025-12-08 15:35:39,121 | INFO     | intersect: -23592336873.817726
[2025-12-08 16:36:42] 2025-12-08 15:35:39,121 | INFO     | chi2: 0.12266142681560997
[2025-12-08 16:36:42] 2025-12-08 15:35:39,121 | INFO     | current memory leak: 13.37 B/s (using 424 data points, chi2=0.12)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,121 | INFO     | could have reported an average CPU frequency of 3762 MHz (19 samples)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,121 | INFO     | ..............................
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | . Timing measurements:
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | . get job = 0 s
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | . initial setup = 0 s
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | . payload setup = 3 s
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | . stage-in = 0 s
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | . payload execution = 27741 s
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | . stage-out = 0 s
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | . log creation = 0 s
[2025-12-08 16:36:42] 2025-12-08 15:35:39,122 | INFO     | ..............................
[2025-12-08 16:36:42] 2025-12-08 15:35:39,156 | INFO     | 
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | job summary report
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | --------------------------------------------------
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | PanDA job id: 6900935664
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | task id: 47556185
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | errors: (none)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | pilot state: finished 
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | transexitcode: 0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | exeerrorcode: 0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | exeerrordiag: 
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | exitcode: 0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | exitmsg: OK
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | cpuconsumptiontime: 216367 s
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | nevents: 1000
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | neventsw: 0
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | pid: 3802193
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | pgrp: 3802193
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | corecount: 8
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | event service: False
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | sizes: {0: 2284317, 2: 2284579, 10: 2284607, 27748: 2322645, 27750: 2331641, 27751: 2331697, 27756: 2332099}
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | --------------------------------------------------
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | 
[2025-12-08 16:36:42] 2025-12-08 15:35:39,157 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-12-08 16:36:42] 2025-12-08 15:35:39,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | job 6900935664 has completed (purged errors)
[2025-12-08 16:36:42] 2025-12-08 15:35:39,166 | INFO     | overall cleanup function is called
[2025-12-08 16:36:42] 2025-12-08 15:35:40,175 | INFO     | --- collectZombieJob: --- 10, [3802193]
[2025-12-08 16:36:42] 2025-12-08 15:35:40,176 | INFO     | zombie collector waiting for pid 3802193
[2025-12-08 16:36:42] 2025-12-08 15:35:40,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 16:36:42] 2025-12-08 15:35:40,176 | INFO     | collected zombie processes
[2025-12-08 16:36:42] 2025-12-08 15:35:40,176 | INFO     | will attempt to kill all subprocesses of pid=3802193
[2025-12-08 16:36:42] 2025-12-08 15:35:40,205 | INFO     | process IDs to be killed: [3802193] (in reverse order)
[2025-12-08 16:36:42] 2025-12-08 15:35:40,221 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 16:36:42] 2025-12-08 15:35:40,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 16:36:42] 2025-12-08 15:35:40,222 | INFO     | did not find any defunct processes belonging to 3802193
[2025-12-08 16:36:42] 2025-12-08 15:35:40,222 | INFO     | did not find any defunct processes belonging to 3802193
[2025-12-08 16:36:42] 2025-12-08 15:35:40,223 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 16:36:42] 2025-12-08 15:35:40,223 | INFO     | ready for new job
[2025-12-08 16:36:42] 2025-12-08 15:35:40,223 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 16:36:42] 2025-12-08 15:35:40,224 | INFO     | ***************************************
[2025-12-08 16:36:42] 2025-12-08 15:35:40,224 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 16:36:42] 2025-12-08 15:35:40,224 | INFO     | ***************************************
[2025-12-08 16:36:42] 2025-12-08 15:35:40,224 | INFO     | 
[2025-12-08 16:36:42] 2025-12-08 15:35:40,224 | INFO     | architecture information:
[2025-12-08 16:36:42] 2025-12-08 15:35:40,224 | INFO     | executing command: cat /etc/os-release
[2025-12-08 16:36:42] 2025-12-08 15:35:40,230 | INFO     | cat /etc/os-release:
[2025-12-08 16:36:42] NAME="CentOS Linux"
[2025-12-08 16:36:42] VERSION="7 (Core)"
[2025-12-08 16:36:42] ID="centos"
[2025-12-08 16:36:42] ID_LIKE="rhel fedora"
[2025-12-08 16:36:42] VERSION_ID="7"
[2025-12-08 16:36:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 16:36:42] ANSI_COLOR="0;31"
[2025-12-08 16:36:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 16:36:42] HOME_URL="https://www.centos.org/"
[2025-12-08 16:36:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 16:36:42] 
[2025-12-08 16:36:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 16:36:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 16:36:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 16:36:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 16:36:42] 
[2025-12-08 16:36:42] 2025-12-08 15:35:40,230 | INFO     | ***************************************
[2025-12-08 16:36:42] 2025-12-08 15:35:40,733 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-12-08 16:36:42] 2025-12-08 15:35:40,740 | INFO     | sufficient remaining disk space (114106040320 B)
[2025-12-08 16:36:42] 2025-12-08 15:35:40,740 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 16:36:42] 2025-12-08 15:35:40,740 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 16:36:42] 2025-12-08 15:35:40,740 | INFO     | update_server=False
[2025-12-08 16:36:42] 2025-12-08 15:35:40,740 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 16:36:42] 2025-12-08 15:35:40,740 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:36:42] 2025-12-08 15:35:40,740 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 16:36:42] 2025-12-08 15:35:41,064 | INFO     | all data control threads have been joined
[2025-12-08 16:36:42] 2025-12-08 15:35:41,232 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-08 16:36:42] 2025-12-08 15:35:41,232 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-08 16:36:42] 2025-12-08 15:35:41,232 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 16:36:42] 2025-12-08 15:35:41,232 | INFO     | will abort loop
[2025-12-08 16:36:42] 2025-12-08 15:35:41,574 | INFO     | all job control threads have been joined
[2025-12-08 16:36:42] 2025-12-08 15:35:41,706 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 16:36:42] 2025-12-08 15:35:41,745 | INFO     | [job] retrieve thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:41,745 | INFO     | [job] queue monitor thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:41,836 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:42,069 | INFO     | [data] control thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:42,232 | INFO     | all payload control threads have been joined
[2025-12-08 16:36:42] 2025-12-08 15:35:42,237 | INFO     | [job] job monitor thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:42,372 | INFO     | [job] validate thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:42,372 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:42,460 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:42,464 | INFO     | [payload] validate_post thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:42,579 | INFO     | [job] control thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:42,851 | INFO     | [data] copytool_in thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:43,233 | INFO     | [payload] control thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:43,273 | INFO     | [payload] failed_post thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:43,711 | INFO     | [data] copytool_out thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:44,746 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:35:51,228 | INFO     | job.realtimelogging is not enabled
[2025-12-08 16:36:42] 2025-12-08 15:35:52,233 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 16:36:42] 2025-12-08 15:36:11,011 | INFO     | PID=3794878 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-08 16:36:42] 2025-12-08 15:36:11,011 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 16:36:42] 2025-12-08 15:36:11,011 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 16:36:42] 2025-12-08 15:36:11,011 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 16:36:42] 2025-12-08 15:36:36,651 | INFO     | [monitor] cgroup control has ended
[2025-12-08 16:36:42] 2025-12-08 15:36:37,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139751995602752)>', '<ExcThread(monitor, started 139751306811136)>']
[2025-12-08 16:36:42] 2025-12-08 15:36:38,148 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 16:36:42] 2025-12-08 15:36:38,148 | INFO     | [monitor] control thread has ended
[2025-12-08 16:36:42] 2025-12-08 15:36:42,680 | INFO     | all workflow threads have been joined
[2025-12-08 16:36:42] 2025-12-08 15:36:42,680 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 16:36:42] 2025-12-08 15:36:42,680 | INFO     | traces error code: 0
[2025-12-08 16:36:42] 2025-12-08 15:36:42,680 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 16:36:42] 2025-12-08 15:36:42,753 [wrapper] ==== pilot stdout END ====
[2025-12-08 16:36:42] 2025-12-08 15:36:42,755 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 16:36:42] 2025-12-08 15:36:42,756 [wrapper] pilotpid: 3794878
[2025-12-08 16:36:42] 2025-12-08 15:36:42,757 [wrapper] Pilot exit status: 0
[2025-12-08 16:36:42] 2025-12-08 15:36:42,762 [wrapper] pandaids: 6900935664
[2025-12-08 16:36:42] 2025-12-08 15:36:42,772 [wrapper] cleanup supervisor_pilot 3870221 3794879
[2025-12-08 16:36:42] 2025-12-08 15:36:42,773 [wrapper] Test setup, not cleaning
[2025-12-08 16:36:42] 2025-12-08 15:36:42,774 [wrapper] apfmon messages muted
[2025-12-08 16:36:42] 2025-12-08 15:36:42,775 [wrapper] ==== wrapper stdout END ====
[2025-12-08 16:36:42] 2025-12-08 15:36:42,776 [wrapper] ==== wrapper stderr END ====
[2025-12-08 16:36:42]  *** Error codes and diagnostics ***
[2025-12-08 16:36:42]     "exeErrorCode": 0,
[2025-12-08 16:36:42]     "exeErrorDiag": "",
[2025-12-08 16:36:42]     "pilotErrorCode": 0,
[2025-12-08 16:36:42]     "pilotErrorDiag": "",
[2025-12-08 16:36:42]  *** Listing of results directory ***
[2025-12-08 16:36:42] total 1322868
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc    576529 Nov 28 01:58 pilot3.tar.gz
[2025-12-08 16:36:42] -rwx------. 1 boinc boinc     36292 Nov 28 02:00 runpilot2-wrapper.sh
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc      5112 Nov 28 02:01 queuedata.json
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc       100 Dec  8 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 16:36:42] -rwxr-xr-x. 1 boinc boinc      7986 Dec  8 08:52 run_atlas
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc       105 Dec  8 08:52 job.xml
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc      6277 Dec  8 08:52 init_data.xml
[2025-12-08 16:36:42] -rw-r--r--. 2 boinc boinc 411263642 Dec  8 08:52 EVNT.47483658._004470.pool.root.1
[2025-12-08 16:36:42] drwxrwx--x. 2 boinc boinc        68 Dec  8 08:52 shared
[2025-12-08 16:36:42] -rw-r--r--. 2 boinc boinc    590112 Dec  8 08:52 input.tar.gz
[2025-12-08 16:36:42] -rw-r--r--. 2 boinc boinc     15847 Dec  8 08:52 start_atlas.sh
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc         0 Dec  8 08:52 boinc_lockfile
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc      2787 Dec  8 08:52 pandaJob.out
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc    981501 Dec  8 08:52 agis_schedconf.cvmfs.json
[2025-12-08 16:36:42] drwx------. 5 boinc boinc      4096 Dec  8 08:52 pilot3
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc       532 Dec  8 16:30 boinc_task_state.xml
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc 928229502 Dec  8 16:35 HITS.47556185._002338.pool.root.1
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc      1025 Dec  8 16:35 memory_monitor_summary.json
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc   1516240 Dec  8 16:35 agis_ddmendpoints.agis.ALL.json
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc   1708696 Dec  8 16:35 log.47556185._002338.job.log.tgz.1
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc        95 Dec  8 16:35 pilot_heartbeat.json
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc      8588 Dec  8 16:35 heartbeat.json
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc        29 Dec  8 16:36 wrapper_checkpoint.txt
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc      8192 Dec  8 16:36 boinc_mmap_file
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc      5008 Dec  8 16:36 pilotlog.txt
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc   3907383 Dec  8 16:36 log.47556185._002338.job.log.1
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc       353 Dec  8 16:36 output.list
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc       620 Dec  8 16:36 runtime_log
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc   5632000 Dec  8 16:36 result.tar.gz
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc      8847 Dec  8 16:36 runtime_log.err
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc       659 Dec  8 16:36 0mpKDmp11i8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmr1KKDm8wvXvm.diag
[2025-12-08 16:36:42] -rw-r--r--. 1 boinc boinc     21323 Dec  8 16:36 stderr.txt
[2025-12-08 16:36:42] HITS file was successfully produced:
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc 928229502 Dec  8 16:35 shared/HITS.pool.root.1
[2025-12-08 16:36:42]  *** Contents of shared directory: ***
[2025-12-08 16:36:42] total 1314200
[2025-12-08 16:36:42] -rw-r--r--. 2 boinc boinc 411263642 Dec  8 08:52 ATLAS.root_0
[2025-12-08 16:36:42] -rw-r--r--. 2 boinc boinc    590112 Dec  8 08:52 input.tar.gz
[2025-12-08 16:36:42] -rw-r--r--. 2 boinc boinc     15847 Dec  8 08:52 start_atlas.sh
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc 928229502 Dec  8 16:35 HITS.pool.root.1
[2025-12-08 16:36:42] -rw-------. 1 boinc boinc   5632000 Dec  8 16:36 result.tar.gz
16:36:44 (3791124): run_atlas exited; CPU time 216433.365964
16:36:44 (3791124): called boinc_finish(0)

</stderr_txt>
]]>

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