Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:12:33 (8400): wrapper (7.7.26015): starting
19:12:33 (8400): wrapper: running run_atlas (--nthreads 8)
[2025-12-07 19:12:33] Arguments: --nthreads 8
[2025-12-07 19:12:33] Threads: 8
[2025-12-07 19:12:33] Checking for CVMFS
[2025-12-07 19:12:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 19:12:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 19:12:33] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 19:12:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 19:12:33] 2.11.2.0 2895 89844 86284 153746 3 1 14000454 20275200 1 130560 0 26630913 99.850 5843756 32974 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-07 19:12:33] CVMFS is ok
[2025-12-07 19:12:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 19:12:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-07 19:12:33] Further information can be found at the LHC@home message board.
[2025-12-07 19:12:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 19:12:33] Checking for apptainer binary...
[2025-12-07 19:12:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 19:12:33] Running /usr/bin/apptainer --version
[2025-12-07 19:12:33] apptainer version 1.3.2-1.el7
[2025-12-07 19:12:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 19:12:35] c-204-7.aglt2.org
[2025-12-07 19:12:35] apptainer works
[2025-12-07 19:12:35] Set ATHENA_PROC_NUMBER=8
[2025-12-07 19:12:35] Set ATHENA_CORE_NUMBER=8
[2025-12-07 19:12:35] Starting ATLAS job with PandaID=6897957738
[2025-12-07 19:12:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 06:32:23]  *** The last 200 lines of the pilot log: ***
[2025-12-08 06:32:23] 2025-12-08 11:31:48,250 | INFO     | monitor loop #3006: job 0:6897957738 is in state 'finished'
[2025-12-08 06:32:23] 2025-12-08 11:31:48,250 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-08 06:32:23] 2025-12-08 11:31:48,494 | INFO     | time since job start (40732s) is within the limit (172800.0s)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,500 | INFO     | time since job start (40734s) is within the limit (172800.0s)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,658 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-08 06:32:23] 2025-12-08 11:31:50,660 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1629.25
[2025-12-08 06:32:23] 2025-12-08 11:31:50,662 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897957738/memory_monitor_summary.json (trf name=prmon)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,663 | INFO     | extracted standard info from prmon json
[2025-12-08 06:32:23] 2025-12-08 11:31:50,663 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 06:32:23] 2025-12-08 11:31:50,663 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 06:32:23] 2025-12-08 11:31:50,675 | INFO     | fitting pss+swap vs Time
[2025-12-08 06:32:23] 2025-12-08 11:31:50,676 | INFO     | sum of square deviations: 92014599216.1199
[2025-12-08 06:32:23] 2025-12-08 11:31:50,686 | INFO     | sum of deviations: 836216163411.6888
[2025-12-08 06:32:23] 2025-12-08 11:31:50,686 | INFO     | mean x: 1765173128.4692655
[2025-12-08 06:32:23] 2025-12-08 11:31:50,686 | INFO     | mean y: 3374010.4482758623
[2025-12-08 06:32:23] 2025-12-08 11:31:50,687 | INFO     | intersect: -16038279312.184326
[2025-12-08 06:32:23] 2025-12-08 11:31:50,687 | INFO     | chi2: 6.205210316421973
[2025-12-08 06:32:23] 2025-12-08 11:31:50,688 | INFO     | sum of square deviations: 89960879427.51057
[2025-12-08 06:32:23] 2025-12-08 11:31:50,700 | INFO     | sum of deviations: 1094585879021.2771
[2025-12-08 06:32:23] 2025-12-08 11:31:50,701 | INFO     | mean x: 1765172975.9728096
[2025-12-08 06:32:23] 2025-12-08 11:31:50,701 | INFO     | mean y: 3393187.570996979
[2025-12-08 06:32:23] 2025-12-08 11:31:50,701 | INFO     | intersect: -21474091534.95989
[2025-12-08 06:32:23] 2025-12-08 11:31:50,702 | INFO     | chi2: 3.0406018491283797
[2025-12-08 06:32:23] 2025-12-08 11:31:50,702 | INFO     | current chi2=3.0406018491283797 (change=50.999213659503475 %)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,703 | INFO     | sum of square deviations: 87937950913.8844
[2025-12-08 06:32:23] 2025-12-08 11:31:50,713 | INFO     | sum of deviations: 1104247439187.2673
[2025-12-08 06:32:23] 2025-12-08 11:31:50,713 | INFO     | mean x: 1765172823.476408
[2025-12-08 06:32:23] 2025-12-08 11:31:50,713 | INFO     | mean y: 3393906.4687975645
[2025-12-08 06:32:23] 2025-12-08 11:31:50,713 | INFO     | intersect: -22162093801.512665
[2025-12-08 06:32:23] 2025-12-08 11:31:50,714 | INFO     | chi2: 2.960839472343616
[2025-12-08 06:32:23] 2025-12-08 11:31:50,714 | INFO     | current chi2=2.960839472343616 (change=2.6232430532668465 %)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,714 | INFO     | right removable region: 656
[2025-12-08 06:32:23] 2025-12-08 11:31:50,715 | INFO     | sum of square deviations: 89960688497.51056
[2025-12-08 06:32:23] 2025-12-08 11:31:50,725 | INFO     | sum of deviations: 584405914129.5195
[2025-12-08 06:32:23] 2025-12-08 11:31:50,725 | INFO     | mean x: 1765173280.9728096
[2025-12-08 06:32:23] 2025-12-08 11:31:50,726 | INFO     | mean y: 3392689.306646526
[2025-12-08 06:32:23] 2025-12-08 11:31:50,726 | INFO     | intersect: -11463590524.06065
[2025-12-08 06:32:23] 2025-12-08 11:31:50,726 | INFO     | chi2: 3.449967271388924
[2025-12-08 06:32:23] 2025-12-08 11:31:50,727 | INFO     | current chi2=3.449967271388924 (change=44.402089607524665 %)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,727 | INFO     | sum of square deviations: 87937609191.835
[2025-12-08 06:32:23] 2025-12-08 11:31:50,737 | INFO     | sum of deviations: 526679791325.44745
[2025-12-08 06:32:23] 2025-12-08 11:31:50,737 | INFO     | mean x: 1765173433.474886
[2025-12-08 06:32:23] 2025-12-08 11:31:50,738 | INFO     | mean y: 3397038.96651446
[2025-12-08 06:32:23] 2025-12-08 11:31:50,738 | INFO     | intersect: -10568657217.906519
[2025-12-08 06:32:23] 2025-12-08 11:31:50,739 | INFO     | chi2: 3.3676138470165644
[2025-12-08 06:32:23] 2025-12-08 11:31:50,739 | INFO     | current chi2=3.3676138470165644 (change=2.3870784240571847 %)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,739 | INFO     | left removable region: 20
[2025-12-08 06:32:23] 2025-12-08 11:31:50,740 | INFO     | sum of square deviations: 79771959842.8725
[2025-12-08 06:32:23] 2025-12-08 11:31:50,749 | INFO     | sum of deviations: 718225108289.7456
[2025-12-08 06:32:23] 2025-12-08 11:31:50,749 | INFO     | mean x: 1765173402.9858491
[2025-12-08 06:32:23] 2025-12-08 11:31:50,749 | INFO     | mean y: 3423350.9716981133
[2025-12-08 06:32:23] 2025-12-08 11:31:50,750 | INFO     | intersect: -15889277054.118895
[2025-12-08 06:32:23] 2025-12-08 11:31:50,750 | INFO     | chi2: 0.04587081570977285
[2025-12-08 06:32:23] 2025-12-08 11:31:50,750 | INFO     | current memory leak: 9.00 B/s (using 636 data points, chi2=0.05)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,751 | INFO     | could have reported an average CPU frequency of 2150 MHz (26 samples)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,751 | INFO     | ..............................
[2025-12-08 06:32:23] 2025-12-08 11:31:50,751 | INFO     | . Timing measurements:
[2025-12-08 06:32:23] 2025-12-08 11:31:50,751 | INFO     | . get job = 0 s
[2025-12-08 06:32:23] 2025-12-08 11:31:50,752 | INFO     | . initial setup = 2 s
[2025-12-08 06:32:23] 2025-12-08 11:31:50,752 | INFO     | . payload setup = 15 s
[2025-12-08 06:32:23] 2025-12-08 11:31:50,752 | INFO     | . stage-in = 0 s
[2025-12-08 06:32:23] 2025-12-08 11:31:50,752 | INFO     | . payload execution = 40682 s
[2025-12-08 06:32:23] 2025-12-08 11:31:50,752 | INFO     | . stage-out = 3 s
[2025-12-08 06:32:23] 2025-12-08 11:31:50,752 | INFO     | . log creation = 0 s
[2025-12-08 06:32:23] 2025-12-08 11:31:50,752 | INFO     | ..............................
[2025-12-08 06:32:23] 2025-12-08 11:31:50,900 | INFO     | 
[2025-12-08 06:32:23] 2025-12-08 11:31:50,900 | INFO     | job summary report
[2025-12-08 06:32:23] 2025-12-08 11:31:50,900 | INFO     | --------------------------------------------------
[2025-12-08 06:32:23] 2025-12-08 11:31:50,901 | INFO     | PanDA job id: 6897957738
[2025-12-08 06:32:23] 2025-12-08 11:31:50,901 | INFO     | task id: 47538121
[2025-12-08 06:32:23] 2025-12-08 11:31:50,901 | INFO     | errors: (none)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,901 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 06:32:23] 2025-12-08 11:31:50,901 | INFO     | pilot state: finished 
[2025-12-08 06:32:23] 2025-12-08 11:31:50,901 | INFO     | transexitcode: 0
[2025-12-08 06:32:23] 2025-12-08 11:31:50,901 | INFO     | exeerrorcode: 0
[2025-12-08 06:32:23] 2025-12-08 11:31:50,901 | INFO     | exeerrordiag: 
[2025-12-08 06:32:23] 2025-12-08 11:31:50,902 | INFO     | exitcode: 0
[2025-12-08 06:32:23] 2025-12-08 11:31:50,902 | INFO     | exitmsg: OK
[2025-12-08 06:32:23] 2025-12-08 11:31:50,902 | INFO     | cpuconsumptiontime: 315486 s
[2025-12-08 06:32:23] 2025-12-08 11:31:50,902 | INFO     | nevents: 1000
[2025-12-08 06:32:23] 2025-12-08 11:31:50,902 | INFO     | neventsw: 0
[2025-12-08 06:32:23] 2025-12-08 11:31:50,902 | INFO     | pid: 20255
[2025-12-08 06:32:23] 2025-12-08 11:31:50,902 | INFO     | pgrp: 20255
[2025-12-08 06:32:23] 2025-12-08 11:31:50,902 | INFO     | corecount: 8
[2025-12-08 06:32:23] 2025-12-08 11:31:50,903 | INFO     | event service: False
[2025-12-08 06:32:23] 2025-12-08 11:31:50,903 | INFO     | sizes: {0: 2284280, 1: 2284479, 7: 2284741, 12: 2284769, 40702: 2348069, 40703: 2348068, 40708: 2357302, 40718: 2357492}
[2025-12-08 06:32:23] 2025-12-08 11:31:50,903 | INFO     | --------------------------------------------------
[2025-12-08 06:32:23] 2025-12-08 11:31:50,903 | INFO     | 
[2025-12-08 06:32:23] 2025-12-08 11:31:50,903 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-08 06:32:23] 2025-12-08 11:31:50,929 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,929 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,929 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,930 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,930 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,930 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,930 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,930 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,930 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,930 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,931 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,931 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,931 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,931 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,931 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,931 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,931 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,932 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,932 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,932 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 06:32:23] 2025-12-08 11:31:50,932 | INFO     | job 6897957738 has completed (purged errors)
[2025-12-08 06:32:23] 2025-12-08 11:31:50,932 | INFO     | overall cleanup function is called
[2025-12-08 06:32:23] 2025-12-08 11:31:51,948 | INFO     | --- collectZombieJob: --- 10, [20255]
[2025-12-08 06:32:23] 2025-12-08 11:31:51,948 | INFO     | zombie collector waiting for pid 20255
[2025-12-08 06:32:23] 2025-12-08 11:31:51,948 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 06:32:23] 2025-12-08 11:31:51,948 | INFO     | collected zombie processes
[2025-12-08 06:32:23] 2025-12-08 11:31:51,948 | INFO     | will attempt to kill all subprocesses of pid=20255
[2025-12-08 06:32:23] 2025-12-08 11:31:52,041 | INFO     | process IDs to be killed: [20255] (in reverse order)
[2025-12-08 06:32:23] 2025-12-08 11:31:52,102 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 06:32:23] 2025-12-08 11:31:52,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 06:32:23] 2025-12-08 11:31:52,105 | INFO     | did not find any defunct processes belonging to 20255
[2025-12-08 06:32:23] 2025-12-08 11:31:52,108 | INFO     | did not find any defunct processes belonging to 20255
[2025-12-08 06:32:23] 2025-12-08 11:31:52,110 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 06:32:23] 2025-12-08 11:31:52,110 | INFO     | ready for new job
[2025-12-08 06:32:23] 2025-12-08 11:31:52,111 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 06:32:23] 2025-12-08 11:31:52,114 | INFO     | ***************************************
[2025-12-08 06:32:23] 2025-12-08 11:31:52,114 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 06:32:23] 2025-12-08 11:31:52,114 | INFO     | ***************************************
[2025-12-08 06:32:23] 2025-12-08 11:31:52,114 | INFO     | 
[2025-12-08 06:32:23] 2025-12-08 11:31:52,115 | INFO     | architecture information:
[2025-12-08 06:32:23] 2025-12-08 11:31:52,116 | INFO     | executing command: cat /etc/os-release
[2025-12-08 06:32:23] 2025-12-08 11:31:52,133 | INFO     | cat /etc/os-release:
[2025-12-08 06:32:23] NAME="CentOS Linux"
[2025-12-08 06:32:23] VERSION="7 (Core)"
[2025-12-08 06:32:23] ID="centos"
[2025-12-08 06:32:23] ID_LIKE="rhel fedora"
[2025-12-08 06:32:23] VERSION_ID="7"
[2025-12-08 06:32:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 06:32:23] ANSI_COLOR="0;31"
[2025-12-08 06:32:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 06:32:23] HOME_URL="https://www.centos.org/"
[2025-12-08 06:32:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 06:32:23] 
[2025-12-08 06:32:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 06:32:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 06:32:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 06:32:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 06:32:23] 
[2025-12-08 06:32:23] 2025-12-08 11:31:52,133 | INFO     | ***************************************
[2025-12-08 06:32:23] 2025-12-08 11:31:52,637 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-08 06:32:23] 2025-12-08 11:31:52,654 | INFO     | sufficient remaining disk space (17738760192 B)
[2025-12-08 06:32:23] 2025-12-08 11:31:52,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 06:32:23] 2025-12-08 11:31:52,655 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 06:32:23] 2025-12-08 11:31:52,655 | INFO     | update_server=False
[2025-12-08 06:32:23] 2025-12-08 11:31:52,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 06:32:23] 2025-12-08 11:31:52,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 06:32:23] 2025-12-08 11:31:52,656 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 06:32:23] 2025-12-08 11:31:52,656 | INFO     | aborting loop
[2025-12-08 06:32:23] 2025-12-08 11:31:53,221 | INFO     | all data control threads have been joined
[2025-12-08 06:32:23] 2025-12-08 11:31:53,530 | INFO     | all payload control threads have been joined
[2025-12-08 06:32:23] 2025-12-08 11:31:53,585 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 06:32:23] 2025-12-08 11:31:53,659 | INFO     | [job] queue monitor thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:53,661 | INFO     | [job] retrieve thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:53,662 | INFO     | [job] job monitor thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:54,123 | INFO     | all job control threads have been joined
[2025-12-08 06:32:23] 2025-12-08 11:31:54,227 | INFO     | [data] control thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:54,383 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:54,490 | INFO     | [payload] validate_post thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:54,530 | INFO     | [payload] control thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:54,592 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:54,619 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:54,897 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:54,983 | INFO     | [payload] failed_post thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:55,071 | INFO     | [data] copytool_in thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:55,072 | INFO     | [job] validate thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:55,129 | INFO     | [job] control thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:55,589 | INFO     | [data] copytool_out thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:31:55,682 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 06:32:23] 2025-12-08 11:31:59,688 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 06:32:23] 2025-12-08 11:32:03,387 | INFO     | [monitor] cgroup control has ended
[2025-12-08 06:32:23] 2025-12-08 11:32:05,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139811596052288)>', '<ExcThread(monitor, started 139811142739712)>']
[2025-12-08 06:32:23] 2025-12-08 11:32:10,053 | INFO     | all workflow threads have been joined
[2025-12-08 06:32:23] 2025-12-08 11:32:10,053 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 06:32:23] 2025-12-08 11:32:10,059 | INFO     | traces error code: 0
[2025-12-08 06:32:23] 2025-12-08 11:32:10,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 06:32:23] 2025-12-08 11:32:23,629 | INFO     | PID=12439 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-08 06:32:23] 2025-12-08 11:32:23,629 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 06:32:23] 2025-12-08 11:32:23,629 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 06:32:23] 2025-12-08 11:32:23,629 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 06:32:23] 2025-12-08 11:32:23,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 06:32:23] 2025-12-08 11:32:23,630 | INFO     | [monitor] control thread has ended
[2025-12-08 06:32:23] 2025-12-08 11:32:23,738 [wrapper] ==== pilot stdout END ====
[2025-12-08 06:32:23] 2025-12-08 11:32:23,743 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 06:32:23] 2025-12-08 11:32:23,747 [wrapper] pilotpid: 12439
[2025-12-08 06:32:23] 2025-12-08 11:32:23,752 [wrapper] Pilot exit status: 0
[2025-12-08 06:32:23] 2025-12-08 11:32:23,769 [wrapper] pandaids: 6897957738
[2025-12-08 06:32:23] 2025-12-08 11:32:23,815 [wrapper] cleanup supervisor_pilot 27848 12440
[2025-12-08 06:32:23] 2025-12-08 11:32:23,820 [wrapper] Test setup, not cleaning
[2025-12-08 06:32:23] 2025-12-08 11:32:23,826 [wrapper] apfmon messages muted
[2025-12-08 06:32:23] 2025-12-08 11:32:23,831 [wrapper] ==== wrapper stdout END ====
[2025-12-08 06:32:23] 2025-12-08 11:32:23,836 [wrapper] ==== wrapper stderr END ====
[2025-12-08 06:32:23]  *** Error codes and diagnostics ***
[2025-12-08 06:32:23]     "exeErrorCode": 0,
[2025-12-08 06:32:23]     "exeErrorDiag": "",
[2025-12-08 06:32:23]     "pilotErrorCode": 0,
[2025-12-08 06:32:23]     "pilotErrorDiag": "",
[2025-12-08 06:32:23]  *** Listing of results directory ***
[2025-12-08 06:32:23] total 1080152
[2025-12-08 06:32:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-08 06:32:23] -rwx------ 1 boincer umatlas     36292 Nov 28 17:46 runpilot2-wrapper.sh
[2025-12-08 06:32:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 17:49 queuedata.json
[2025-12-08 06:32:23] -rw-r--r-- 1 boincer umatlas       100 Dec  7 19:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 06:32:23] -rwxr-xr-x 1 boincer umatlas      7986 Dec  7 19:12 run_atlas
[2025-12-08 06:32:23] -rw-r--r-- 1 boincer umatlas       105 Dec  7 19:12 job.xml
[2025-12-08 06:32:23] -rw-r--r-- 2 boincer umatlas 380229600 Dec  7 19:12 EVNT.47528880._000070.pool.root.1
[2025-12-08 06:32:23] -rw-r--r-- 2 boincer umatlas     15847 Dec  7 19:12 start_atlas.sh
[2025-12-08 06:32:23] drwxrwx--x 2 boincer umatlas      4096 Dec  7 19:12 shared
[2025-12-08 06:32:23] -rw-r--r-- 2 boincer umatlas    590130 Dec  7 19:12 input.tar.gz
[2025-12-08 06:32:23] -rw-r--r-- 1 boincer umatlas         0 Dec  7 19:12 boinc_lockfile
[2025-12-08 06:32:23] -rw-r--r-- 1 boincer umatlas      2880 Dec  7 19:12 pandaJob.out
[2025-12-08 06:32:23] -rw------- 1 boincer umatlas        57 Dec  7 19:12 setup.sh.local
[2025-12-08 06:32:23] -rw------- 1 boincer umatlas    981501 Dec  7 19:12 agis_schedconf.cvmfs.json
[2025-12-08 06:32:23] drwx------ 5 boincer umatlas      4096 Dec  7 19:12 pilot3
[2025-12-08 06:32:24] -rw-r--r-- 1 boincer umatlas       532 Dec  8 06:23 boinc_task_state.xml
[2025-12-08 06:32:24] -rw-r--r-- 1 boincer umatlas      5912 Dec  8 06:29 init_data.xml
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas 706546720 Dec  8 06:31 HITS.47538121._000696.pool.root.1
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas      1061 Dec  8 06:31 memory_monitor_summary.json
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas        95 Dec  8 06:31 pilot_heartbeat.json
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas   1516240 Dec  8 06:31 agis_ddmendpoints.agis.ALL.json
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas   2038148 Dec  8 06:31 log.47538121._000696.job.log.tgz.1
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas     28209 Dec  8 06:31 heartbeat.json
[2025-12-08 06:32:24] -rw-r--r-- 1 boincer umatlas        29 Dec  8 06:31 wrapper_checkpoint.txt
[2025-12-08 06:32:24] -rw-r--r-- 1 boincer umatlas      8192 Dec  8 06:31 boinc_mmap_file
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas       745 Dec  8 06:32 pilotlog.txt
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas   5638282 Dec  8 06:32 log.47538121._000696.job.log.1
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas       353 Dec  8 06:32 output.list
[2025-12-08 06:32:24] -rw-r--r-- 1 boincer umatlas       620 Dec  8 06:32 runtime_log
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas   7720960 Dec  8 06:32 result.tar.gz
[2025-12-08 06:32:24] -rw-r--r-- 1 boincer umatlas      9338 Dec  8 06:32 runtime_log.err
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas       667 Dec  8 06:32 rgsMDmkPMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDfLKDmAsxTBo.diag
[2025-12-08 06:32:24] -rw-r--r-- 1 boincer umatlas     21306 Dec  8 06:32 stderr.txt
[2025-12-08 06:32:24] HITS file was successfully produced:
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas 706546720 Dec  8 06:31 shared/HITS.pool.root.1
[2025-12-08 06:32:24]  *** Contents of shared directory: ***
[2025-12-08 06:32:24] total 1069452
[2025-12-08 06:32:24] -rw-r--r-- 2 boincer umatlas 380229600 Dec  7 19:12 ATLAS.root_0
[2025-12-08 06:32:24] -rw-r--r-- 2 boincer umatlas     15847 Dec  7 19:12 start_atlas.sh
[2025-12-08 06:32:24] -rw-r--r-- 2 boincer umatlas    590130 Dec  7 19:12 input.tar.gz
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas 706546720 Dec  8 06:31 HITS.pool.root.1
[2025-12-08 06:32:24] -rw------- 1 boincer umatlas   7720960 Dec  8 06:32 result.tar.gz
06:32:25 (8400): run_atlas exited; CPU time 311389.472496
06:32:25 (8400): called boinc_finish(0)

</stderr_txt>
]]>

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