Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:40:23 (19683): wrapper (7.7.26015): starting
16:40:23 (19683): wrapper: running run_atlas (--nthreads 8)
[2025-12-07 16:40:23] Arguments: --nthreads 8
[2025-12-07 16:40:23] Threads: 8
[2025-12-07 16:40:23] Checking for CVMFS
[2025-12-07 16:40:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-07 16:40:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-07 16:40:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-07 16:40:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-07 16:40:23] 2.11.2.0 2908 186253 94436 153741 0 1 15959489 20275201 1 130560 2 73156966 99.937 8812762 26417 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-12-07 16:40:23] CVMFS is ok
[2025-12-07 16:40:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-07 16:40:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-07 16:40:24] Further information can be found at the LHC@home message board.
[2025-12-07 16:40:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-07 16:40:24] Checking for apptainer binary...
[2025-12-07 16:40:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-07 16:40:24] Running /usr/bin/apptainer --version
[2025-12-07 16:40:24] apptainer version 1.3.2-1.el7
[2025-12-07 16:40:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-07 16:40:25] c-115-5.aglt2.org
[2025-12-07 16:40:25] apptainer works
[2025-12-07 16:40:26] Set ATHENA_PROC_NUMBER=8
[2025-12-07 16:40:26] Set ATHENA_CORE_NUMBER=8
[2025-12-07 16:40:26] Starting ATLAS job with PandaID=6900972926
[2025-12-07 16:40:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-08 04:02:57]  *** The last 200 lines of the pilot log: ***
[2025-12-08 04:02:57] 2025-12-08 09:01:49,525 | INFO     | extracted standard info from prmon json
[2025-12-08 04:02:57] 2025-12-08 09:01:49,526 | INFO     | extracted standard memory fields from prmon json
[2025-12-08 04:02:57] 2025-12-08 09:01:49,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-08 04:02:57] 2025-12-08 09:01:49,537 | INFO     | fitting pss+swap vs Time
[2025-12-08 04:02:57] 2025-12-08 09:01:49,538 | INFO     | sum of square deviations: 93262265060.26297
[2025-12-08 04:02:57] 2025-12-08 09:01:49,547 | INFO     | sum of deviations: 588028012730.2214
[2025-12-08 04:02:57] 2025-12-08 09:01:49,547 | INFO     | mean x: 1765164080.0925374
[2025-12-08 04:02:57] 2025-12-08 09:01:49,547 | INFO     | mean y: 3217453.9641791047
[2025-12-08 04:02:57] 2025-12-08 09:01:49,547 | INFO     | intersect: -11126320580.404654
[2025-12-08 04:02:57] 2025-12-08 09:01:49,548 | INFO     | chi2: 7.0582520016066
[2025-12-08 04:02:57] 2025-12-08 09:01:49,549 | INFO     | sum of square deviations: 91189984495.99367
[2025-12-08 04:02:57] 2025-12-08 09:01:49,557 | INFO     | sum of deviations: 867202605550.0209
[2025-12-08 04:02:57] 2025-12-08 09:01:49,557 | INFO     | mean x: 1765163927.5969925
[2025-12-08 04:02:57] 2025-12-08 09:01:49,557 | INFO     | mean y: 3238001.4105263157
[2025-12-08 04:02:57] 2025-12-08 09:01:49,558 | INFO     | intersect: -16783197106.518154
[2025-12-08 04:02:57] 2025-12-08 09:01:49,558 | INFO     | chi2: 3.240842353753806
[2025-12-08 04:02:57] 2025-12-08 09:01:49,558 | INFO     | current chi2=3.240842353753806 (change=54.084349028397895 %)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,559 | INFO     | sum of square deviations: 89148634744.19841
[2025-12-08 04:02:57] 2025-12-08 09:01:49,567 | INFO     | sum of deviations: 988559963786.9532
[2025-12-08 04:02:57] 2025-12-08 09:01:49,568 | INFO     | mean x: 1765163775.101515
[2025-12-08 04:02:57] 2025-12-08 09:01:49,568 | INFO     | mean y: 3247059.0454545454
[2025-12-08 04:02:57] 2025-12-08 09:01:49,568 | INFO     | intersect: -19570470952.446068
[2025-12-08 04:02:57] 2025-12-08 09:01:49,568 | INFO     | chi2: 2.3815312229789325
[2025-12-08 04:02:57] 2025-12-08 09:01:49,569 | INFO     | current chi2=2.3815312229789325 (change=26.51505494488338 %)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,569 | INFO     | sum of square deviations: 87137903088.79399
[2025-12-08 04:02:57] 2025-12-08 09:01:49,578 | INFO     | sum of deviations: 982867447505.6119
[2025-12-08 04:02:57] 2025-12-08 09:01:49,578 | INFO     | mean x: 1765163622.6030533
[2025-12-08 04:02:57] 2025-12-08 09:01:49,578 | INFO     | mean y: 3246623.2946564886
[2025-12-08 04:02:57] 2025-12-08 09:01:49,578 | INFO     | intersect: -19906824685.28076
[2025-12-08 04:02:57] 2025-12-08 09:01:49,579 | INFO     | chi2: 2.359359715021976
[2025-12-08 04:02:57] 2025-12-08 09:01:49,579 | INFO     | current chi2=2.359359715021976 (change=0.9309770009743347 %)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,579 | INFO     | right removable region: 654
[2025-12-08 04:02:57] 2025-12-08 09:01:49,579 | INFO     | sum of square deviations: 91189742325.99367
[2025-12-08 04:02:57] 2025-12-08 09:01:49,588 | INFO     | sum of deviations: 382837993163.75024
[2025-12-08 04:02:57] 2025-12-08 09:01:49,588 | INFO     | mean x: 1765164232.5969925
[2025-12-08 04:02:57] 2025-12-08 09:01:49,588 | INFO     | mean y: 3232526.27518797
[2025-12-08 04:02:57] 2025-12-08 09:01:49,588 | INFO     | intersect: -7407380939.39347
[2025-12-08 04:02:57] 2025-12-08 09:01:49,589 | INFO     | chi2: 4.844928804023097
[2025-12-08 04:02:57] 2025-12-08 09:01:49,589 | INFO     | current chi2=4.844928804023097 (change=31.357950907387632 %)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,590 | INFO     | sum of square deviations: 89148190847.3999
[2025-12-08 04:02:57] 2025-12-08 09:01:49,598 | INFO     | sum of deviations: 343450184786.1006
[2025-12-08 04:02:57] 2025-12-08 09:01:49,598 | INFO     | mean x: 1765164385.1
[2025-12-08 04:02:57] 2025-12-08 09:01:49,598 | INFO     | mean y: 3235466.3015151517
[2025-12-08 04:02:57] 2025-12-08 09:01:49,599 | INFO     | intersect: -6797194564.613916
[2025-12-08 04:02:57] 2025-12-08 09:01:49,599 | INFO     | chi2: 4.807680446406651
[2025-12-08 04:02:57] 2025-12-08 09:01:49,599 | INFO     | current chi2=4.807680446406651 (change=0.7688112482791615 %)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,600 | INFO     | left removable region: 20
[2025-12-08 04:02:57] 2025-12-08 09:01:49,600 | INFO     | sum of square deviations: 79022374663.04889
[2025-12-08 04:02:57] 2025-12-08 09:01:49,608 | INFO     | sum of deviations: 694541478390.6356
[2025-12-08 04:02:57] 2025-12-08 09:01:49,608 | INFO     | mean x: 1765164202.1119874
[2025-12-08 04:02:57] 2025-12-08 09:01:49,608 | INFO     | mean y: 3268581.455835962
[2025-12-08 04:02:57] 2025-12-08 09:01:49,609 | INFO     | intersect: -15511068462.509996
[2025-12-08 04:02:57] 2025-12-08 09:01:49,609 | INFO     | chi2: 0.0683487315662622
[2025-12-08 04:02:57] 2025-12-08 09:01:49,609 | INFO     | current memory leak: 8.79 B/s (using 634 data points, chi2=0.07)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,610 | INFO     | could have reported an average CPU frequency of 2399 MHz (26 samples)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,610 | INFO     | ..............................
[2025-12-08 04:02:57] 2025-12-08 09:01:49,610 | INFO     | . Timing measurements:
[2025-12-08 04:02:57] 2025-12-08 09:01:49,610 | INFO     | . get job = 0 s
[2025-12-08 04:02:57] 2025-12-08 09:01:49,610 | INFO     | . initial setup = 2 s
[2025-12-08 04:02:57] 2025-12-08 09:01:49,611 | INFO     | . payload setup = 8 s
[2025-12-08 04:02:57] 2025-12-08 09:01:49,611 | INFO     | . stage-in = 0 s
[2025-12-08 04:02:57] 2025-12-08 09:01:49,611 | INFO     | . payload execution = 40821 s
[2025-12-08 04:02:57] 2025-12-08 09:01:49,611 | INFO     | . stage-out = 3 s
[2025-12-08 04:02:57] 2025-12-08 09:01:49,611 | INFO     | . log creation = 0 s
[2025-12-08 04:02:57] 2025-12-08 09:01:49,611 | INFO     | ..............................
[2025-12-08 04:02:57] 2025-12-08 09:01:49,693 | INFO     | 
[2025-12-08 04:02:57] 2025-12-08 09:01:49,693 | INFO     | job summary report
[2025-12-08 04:02:57] 2025-12-08 09:01:49,693 | INFO     | --------------------------------------------------
[2025-12-08 04:02:57] 2025-12-08 09:01:49,693 | INFO     | PanDA job id: 6900972926
[2025-12-08 04:02:57] 2025-12-08 09:01:49,693 | INFO     | task id: 47556185
[2025-12-08 04:02:57] 2025-12-08 09:01:49,693 | INFO     | errors: (none)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | pilot state: finished 
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | transexitcode: 0
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | exeerrorcode: 0
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | exeerrordiag: 
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | exitcode: 0
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | exitmsg: OK
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | cpuconsumptiontime: 316579 s
[2025-12-08 04:02:57] 2025-12-08 09:01:49,694 | INFO     | nevents: 1000
[2025-12-08 04:02:57] 2025-12-08 09:01:49,695 | INFO     | neventsw: 0
[2025-12-08 04:02:57] 2025-12-08 09:01:49,695 | INFO     | pid: 29915
[2025-12-08 04:02:57] 2025-12-08 09:01:49,695 | INFO     | pgrp: 29915
[2025-12-08 04:02:57] 2025-12-08 09:01:49,695 | INFO     | corecount: 8
[2025-12-08 04:02:57] 2025-12-08 09:01:49,695 | INFO     | event service: False
[2025-12-08 04:02:57] 2025-12-08 09:01:49,695 | INFO     | sizes: {0: 2284146, 1: 2284345, 6: 2284607, 11: 2284635, 40834: 2328536, 40837: 2337530, 40840: 2337714, 40849: 2337960}
[2025-12-08 04:02:57] 2025-12-08 09:01:49,696 | INFO     | --------------------------------------------------
[2025-12-08 04:02:57] 2025-12-08 09:01:49,696 | INFO     | 
[2025-12-08 04:02:57] 2025-12-08 09:01:49,696 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-08 04:02:57] 2025-12-08 09:01:49,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,725 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,725 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,726 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,728 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-08 04:02:57] 2025-12-08 09:01:49,728 | INFO     | job 6900972926 has completed (purged errors)
[2025-12-08 04:02:57] 2025-12-08 09:01:49,729 | INFO     | overall cleanup function is called
[2025-12-08 04:02:57] 2025-12-08 09:01:50,744 | INFO     | --- collectZombieJob: --- 10, [29915]
[2025-12-08 04:02:57] 2025-12-08 09:01:50,744 | INFO     | zombie collector waiting for pid 29915
[2025-12-08 04:02:57] 2025-12-08 09:01:50,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-08 04:02:57] 2025-12-08 09:01:50,745 | INFO     | collected zombie processes
[2025-12-08 04:02:57] 2025-12-08 09:01:50,745 | INFO     | will attempt to kill all subprocesses of pid=29915
[2025-12-08 04:02:57] 2025-12-08 09:01:50,835 | INFO     | process IDs to be killed: [29915] (in reverse order)
[2025-12-08 04:02:57] 2025-12-08 09:01:50,892 | WARNING  | found no corresponding commands to process id(s)
[2025-12-08 04:02:57] 2025-12-08 09:01:50,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-08 04:02:57] 2025-12-08 09:01:50,897 | INFO     | did not find any defunct processes belonging to 29915
[2025-12-08 04:02:57] 2025-12-08 09:01:50,901 | INFO     | did not find any defunct processes belonging to 29915
[2025-12-08 04:02:57] 2025-12-08 09:01:50,903 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-08 04:02:57] 2025-12-08 09:01:50,903 | INFO     | ready for new job
[2025-12-08 04:02:57] 2025-12-08 09:01:50,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-08 04:02:57] 2025-12-08 09:01:50,907 | INFO     | ***************************************
[2025-12-08 04:02:57] 2025-12-08 09:01:50,907 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-08 04:02:57] 2025-12-08 09:01:50,907 | INFO     | ***************************************
[2025-12-08 04:02:57] 2025-12-08 09:01:50,907 | INFO     | 
[2025-12-08 04:02:57] 2025-12-08 09:01:50,908 | INFO     | architecture information:
[2025-12-08 04:02:57] 2025-12-08 09:01:50,909 | INFO     | executing command: cat /etc/os-release
[2025-12-08 04:02:57] 2025-12-08 09:01:50,929 | INFO     | cat /etc/os-release:
[2025-12-08 04:02:57] NAME="CentOS Linux"
[2025-12-08 04:02:57] VERSION="7 (Core)"
[2025-12-08 04:02:57] ID="centos"
[2025-12-08 04:02:57] ID_LIKE="rhel fedora"
[2025-12-08 04:02:57] VERSION_ID="7"
[2025-12-08 04:02:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-08 04:02:57] ANSI_COLOR="0;31"
[2025-12-08 04:02:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-08 04:02:57] HOME_URL="https://www.centos.org/"
[2025-12-08 04:02:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-08 04:02:57] 
[2025-12-08 04:02:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-08 04:02:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-08 04:02:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-08 04:02:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-08 04:02:57] 
[2025-12-08 04:02:57] 2025-12-08 09:01:50,929 | INFO     | ***************************************
[2025-12-08 04:02:57] 2025-12-08 09:01:51,432 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-08 04:02:57] 2025-12-08 09:01:51,453 | INFO     | sufficient remaining disk space (17453547520 B)
[2025-12-08 04:02:57] 2025-12-08 09:01:51,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-08 04:02:57] 2025-12-08 09:01:51,454 | INFO     | current server update state: UPDATING_FINAL
[2025-12-08 04:02:57] 2025-12-08 09:01:51,454 | INFO     | update_server=False
[2025-12-08 04:02:57] 2025-12-08 09:01:51,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-08 04:02:57] 2025-12-08 09:01:51,454 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-08 04:02:57] 2025-12-08 09:01:51,455 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-08 04:02:57] 2025-12-08 09:01:51,708 | INFO     | all payload control threads have been joined
[2025-12-08 04:02:57] 2025-12-08 09:01:51,709 | INFO     | all job control threads have been joined
[2025-12-08 04:02:57] 2025-12-08 09:01:51,888 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-08 04:02:57] 2025-12-08 09:01:52,212 | INFO     | all data control threads have been joined
[2025-12-08 04:02:57] 2025-12-08 09:01:52,311 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-08 04:02:57] 2025-12-08 09:01:52,312 | INFO     | aborting loop
[2025-12-08 04:02:57] 2025-12-08 09:01:52,459 | INFO     | [job] retrieve thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:52,460 | INFO     | [job] queue monitor thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:52,508 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:52,714 | INFO     | [payload] control thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:52,714 | INFO     | [job] control thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:52,865 | INFO     | [payload] validate_pre thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:52,886 | INFO     | [job] validate thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:52,968 | INFO     | [job] create_data_payload thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:53,143 | INFO     | [payload] validate_post thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:53,218 | INFO     | [data] control thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:53,312 | INFO     | [job] job monitor thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:53,398 | INFO     | [payload] failed_post thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:53,456 | INFO     | [data] copytool_out thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:53,467 | INFO     | [payload] execute_payloads thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:53,829 | INFO     | [data] copytool_in thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:01:55,895 | INFO     | [data] queue_monitor thread has finished
[2025-12-08 04:02:57] 2025-12-08 09:02:22,023 | INFO     | PID=23382 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-08 04:02:57] 2025-12-08 09:02:22,023 | INFO     | found 0 job(s) in 20 queues
[2025-12-08 04:02:57] 2025-12-08 09:02:22,023 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-08 04:02:57] 2025-12-08 09:02:22,024 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-08 04:02:57] 2025-12-08 09:02:51,129 | INFO     | [monitor] cgroup control has ended
[2025-12-08 04:02:57] 2025-12-08 09:02:52,398 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140005188929344)>', '<ExcThread(monitor, started 140004290443008)>']
[2025-12-08 04:02:57] 2025-12-08 09:02:53,146 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-08 04:02:57] 2025-12-08 09:02:53,147 | INFO     | [monitor] control thread has ended
[2025-12-08 04:02:57] 2025-12-08 09:02:57,424 | INFO     | all workflow threads have been joined
[2025-12-08 04:02:57] 2025-12-08 09:02:57,424 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-08 04:02:57] 2025-12-08 09:02:57,424 | INFO     | traces error code: 0
[2025-12-08 04:02:57] 2025-12-08 09:02:57,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-08 04:02:57] 2025-12-08 09:02:57,545 [wrapper] ==== pilot stdout END ====
[2025-12-08 04:02:57] 2025-12-08 09:02:57,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-08 04:02:57] 2025-12-08 09:02:57,555 [wrapper] pilotpid: 23382
[2025-12-08 04:02:57] 2025-12-08 09:02:57,559 [wrapper] Pilot exit status: 0
[2025-12-08 04:02:57] 2025-12-08 09:02:57,577 [wrapper] pandaids: 6900972926
[2025-12-08 04:02:57] 2025-12-08 09:02:57,625 [wrapper] cleanup supervisor_pilot  4168 23383
[2025-12-08 04:02:57] 2025-12-08 09:02:57,630 [wrapper] Test setup, not cleaning
[2025-12-08 04:02:57] 2025-12-08 09:02:57,635 [wrapper] apfmon messages muted
[2025-12-08 04:02:57] 2025-12-08 09:02:57,640 [wrapper] ==== wrapper stdout END ====
[2025-12-08 04:02:57] 2025-12-08 09:02:57,645 [wrapper] ==== wrapper stderr END ====
[2025-12-08 04:02:57]  *** Error codes and diagnostics ***
[2025-12-08 04:02:57]     "exeErrorCode": 0,
[2025-12-08 04:02:57]     "exeErrorDiag": "",
[2025-12-08 04:02:57]     "pilotErrorCode": 0,
[2025-12-08 04:02:57]     "pilotErrorDiag": "",
[2025-12-08 04:02:57]  *** Listing of results directory ***
[2025-12-08 04:02:57] total 1331372
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 19:58 pilot3.tar.gz
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 19:59 queuedata.json
[2025-12-08 04:02:57] -rwx------ 1 boincer umatlas     36292 Nov 27 19:59 runpilot2-wrapper.sh
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas       100 Dec  7 16:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-08 04:02:57] -rwxr-xr-x 1 boincer umatlas      7986 Dec  7 16:40 run_atlas
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas       105 Dec  7 16:40 job.xml
[2025-12-08 04:02:57] -rw-r--r-- 2 boincer umatlas 408190669 Dec  7 16:40 EVNT.47483658._004510.pool.root.1
[2025-12-08 04:02:57] -rw-r--r-- 2 boincer umatlas     15847 Dec  7 16:40 start_atlas.sh
[2025-12-08 04:02:57] drwxrwx--x 2 boincer umatlas      4096 Dec  7 16:40 shared
[2025-12-08 04:02:57] -rw-r--r-- 2 boincer umatlas    590108 Dec  7 16:40 input.tar.gz
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas         0 Dec  7 16:40 boinc_lockfile
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas      2788 Dec  7 16:40 pandaJob.out
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas        57 Dec  7 16:40 setup.sh.local
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas    981517 Dec  7 16:40 agis_schedconf.cvmfs.json
[2025-12-08 04:02:57] drwx------ 5 boincer umatlas      4096 Dec  7 16:40 pilot3
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas       532 Dec  8 03:50 boinc_task_state.xml
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas 936067433 Dec  8 04:01 HITS.47556185._002733.pool.root.1
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas      1061 Dec  8 04:01 memory_monitor_summary.json
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas   1516240 Dec  8 04:01 agis_ddmendpoints.agis.ALL.json
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas   1943131 Dec  8 04:01 log.47556185._002733.job.log.tgz.1
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas      8658 Dec  8 04:01 heartbeat.json
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas        95 Dec  8 04:02 pilot_heartbeat.json
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas      5911 Dec  8 04:02 init_data.xml
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas      8192 Dec  8 04:02 boinc_mmap_file
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas        29 Dec  8 04:02 wrapper_checkpoint.txt
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas      4746 Dec  8 04:02 pilotlog.txt
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas   5636362 Dec  8 04:02 log.47556185._002733.job.log.1
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas       353 Dec  8 04:02 output.list
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas       620 Dec  8 04:02 runtime_log
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas   7598080 Dec  8 04:02 result.tar.gz
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas      9338 Dec  8 04:02 runtime_log.err
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas       667 Dec  8 04:02 8qMNDmm01i8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0AOKDmzRhsPo.diag
[2025-12-08 04:02:57] -rw-r--r-- 1 boincer umatlas     21081 Dec  8 04:02 stderr.txt
[2025-12-08 04:02:57] HITS file was successfully produced:
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas 936067433 Dec  8 04:01 shared/HITS.pool.root.1
[2025-12-08 04:02:57]  *** Contents of shared directory: ***
[2025-12-08 04:02:57] total 1320776
[2025-12-08 04:02:57] -rw-r--r-- 2 boincer umatlas 408190669 Dec  7 16:40 ATLAS.root_0
[2025-12-08 04:02:57] -rw-r--r-- 2 boincer umatlas     15847 Dec  7 16:40 start_atlas.sh
[2025-12-08 04:02:57] -rw-r--r-- 2 boincer umatlas    590108 Dec  7 16:40 input.tar.gz
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas 936067433 Dec  8 04:01 HITS.pool.root.1
[2025-12-08 04:02:57] -rw------- 1 boincer umatlas   7598080 Dec  8 04:02 result.tar.gz
04:02:58 (19683): run_atlas exited; CPU time 314589.356937
04:02:58 (19683): called boinc_finish(0)

</stderr_txt>
]]>

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